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Volumn 45, Issue 3, 2009, Pages 219-235

Extracellular DNA in soil and sediment: Fate and ecological relevance

Author keywords

Extracellular DNA; Intracellular DNA; Soil and sediments; Transformation

Indexed keywords

ADSORPTION; COLLOID; DEGRADATION; DNA; PROKARYOTE; SEDIMENT CHEMISTRY; SOIL CARBON; SOIL MICROORGANISM; SOIL NITROGEN; SOIL ORGANIC MATTER; TRANSFORMATION;

EID: 59449100317     PISSN: 01782762     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00374-008-0345-8     Document Type: Review
Times cited : (412)

References (177)
  • 1
    • 0000419321 scopus 로고
    • Protection of sediment adsorbed transforming DNA against enzymatic inactivation
    • BW Aardema MG Lorenz WE Krumbein 1983 Protection of sediment adsorbed transforming DNA against enzymatic inactivation Appl Environ Microbiol 46 417 420
    • (1983) Appl Environ Microbiol , vol.46 , pp. 417-420
    • Aardema, B.W.1    Lorenz, M.G.2    Krumbein, W.E.3
  • 2
    • 1842812502 scopus 로고    scopus 로고
    • Distribution of microbial communities in a forest soil profile investigated by microbial biomass, soil respiration and DGGE of total and extracellular DNA
    • A Agnelli J Ascher G Corti MT Ceccherini P Nannipieri G Pietramellara 2004 Distribution of microbial communities in a forest soil profile investigated by microbial biomass, soil respiration and DGGE of total and extracellular DNA Soil Biol Biochem 36 859 868
    • (2004) Soil Biol Biochem , vol.36 , pp. 859-868
    • Agnelli, A.1    Ascher, J.2    Corti, G.3    Ceccherini, M.T.4    Nannipieri, P.5    Pietramellara, G.6
  • 4
    • 0028140446 scopus 로고
    • The extracellular nuclease of Serratia marcescens: Studies on the activity in vitro and effect on transforming DNA in a groundwater aquifer microcosm
    • I Ahrenholtz MG Lorenz W Wackernagel 1994 The extracellular nuclease of Serratia marcescens: studies on the activity in vitro and effect on transforming DNA in a groundwater aquifer microcosm Arch Microbiol Res 161 1 8
    • (1994) Arch Microbiol Res , vol.161 , pp. 1-8
    • Ahrenholtz, I.1    Lorenz, M.G.2    Wackernagel, W.3
  • 8
    • 28044469669 scopus 로고    scopus 로고
    • Relative movement and soil fixation of soluble organic and inorganic phosphorus
    • BH Anderson FR Magdoff 2005 Relative movement and soil fixation of soluble organic and inorganic phosphorus J Environ Qual 34 2228 2233
    • (2005) J Environ Qual , vol.34 , pp. 2228-2233
    • Anderson, B.H.1    Magdoff, F.R.2
  • 10
    • 33744595286 scopus 로고    scopus 로고
    • A comparative study of calf thymus DNA binding to Cr(III) and Cr(VI) ions
    • H Arakawa R Ahmad M Naoui HA Tajmir-Riahi 2000 A comparative study of calf thymus DNA binding to Cr(III) and Cr(VI) ions J Biol Chem 275 1050 1053
    • (2000) J Biol Chem , vol.275 , pp. 1050-1053
    • Arakawa, H.1    Ahmad, R.2    Naoui, M.3    Tajmir-Riahi, H.A.4
  • 11
    • 0026286537 scopus 로고
    • Dissolved and particulate DNA dynamics during a spring bloom in the Antarctic Peninsula region, 1986-87
    • DM Bailiff DM Karl 1991 Dissolved and particulate DNA dynamics during a spring bloom in the Antarctic Peninsula region, 1986-87 Deep Sea Res 38 1077 1095
    • (1991) Deep Sea Res , vol.38 , pp. 1077-1095
    • Bailiff, D.M.1    Karl, D.M.2
  • 13
    • 0030755081 scopus 로고    scopus 로고
    • Against all odds: The survival strategies of Deinococcus radiodurans
    • JR Battista 1997 Against all odds: the survival strategies of Deinococcus radiodurans Annu Rev Microbiol 51 203 224
    • (1997) Annu Rev Microbiol , vol.51 , pp. 203-224
    • Battista, J.R.1
  • 14
    • 0029764393 scopus 로고    scopus 로고
    • Genetic transformation in freshwater: Escherichia coli is able to develop natural competence
    • B Baur K Hanselmann W Schlimme B Jenni 1996 Genetic transformation in freshwater: Escherichia coli is able to develop natural competence Appl Environ Microbiol 62 3673 3678
    • (1996) Appl Environ Microbiol , vol.62 , pp. 3673-3678
    • Baur, B.1    Hanselmann, K.2    Schlimme, W.3    Jenni, B.4
  • 15
    • 0032145316 scopus 로고    scopus 로고
    • Serratia marcescens and its extracellular nuclease
    • MJ Benedik U Strych 1998 Serratia marcescens and its extracellular nuclease FEMS Microbiol Lett 165 1 13
    • (1998) FEMS Microbiol Lett , vol.165 , pp. 1-13
    • Benedik, M.J.1    Strych, U.2
  • 16
    • 0020332377 scopus 로고
    • Macropores and water flow in soils
    • K Beven P Germann 1982 Macropores and water flow in soils Water Resour Res 18 1311 1325
    • (1982) Water Resour Res , vol.18 , pp. 1311-1325
    • Beven, K.1    Germann, P.2
  • 17
    • 3542995148 scopus 로고    scopus 로고
    • Quantitative isolation of microbial DNA from different types of soils of natural and agricultural ecosystems
    • EV Blagodatskaya SA Blagodatskii TH Anderson 2003 Quantitative isolation of microbial DNA from different types of soils of natural and agricultural ecosystems Microbiol 72 744 749
    • (2003) Microbiol , vol.72 , pp. 744-749
    • Blagodatskaya, E.V.1    Blagodatskii, S.A.2    Anderson, T.H.3
  • 18
    • 0031449524 scopus 로고    scopus 로고
    • Mechanism of retarded DNA degradation and prokaryotic origin of DNases in non sterile soils
    • SAE Blum MG Lorenz W Wackernagel 1997 Mechanism of retarded DNA degradation and prokaryotic origin of DNases in non sterile soils Syst Appl Microbiol 20 513 521
    • (1997) Syst Appl Microbiol , vol.20 , pp. 513-521
    • Blum, S.A.E.1    Lorenz, M.G.2    Wackernagel, W.3
  • 20
    • 0033771173 scopus 로고    scopus 로고
    • PCR primers that amplify fungal rRNA genes from environmental samples
    • J Borneman JR Hartin 2000 PCR primers that amplify fungal rRNA genes from environmental samples Appl Environ Microbiol 66 4356 4360
    • (2000) Appl Environ Microbiol , vol.66 , pp. 4356-4360
    • Borneman, J.1    Hartin, J.R.2
  • 21
    • 0038382939 scopus 로고    scopus 로고
    • Effects of genetically modified plants on microbial communities and processes in soil
    • M Bruinsma G Kowalchuk J van Veen 2003 Effects of genetically modified plants on microbial communities and processes in soil Biol Fertil Soils 37 329 337
    • (2003) Biol Fertil Soils , vol.37 , pp. 329-337
    • Bruinsma, M.1    Kowalchuk, G.2    Van Veen, J.3
  • 23
    • 32544437681 scopus 로고    scopus 로고
    • Adsorption of DNA on clay minerals and various colloidal particles from an Alfisol
    • P Cai Q Huang X Zhang H Chen 2006 Adsorption of DNA on clay minerals and various colloidal particles from an Alfisol Soil Biol Biochem 38 471 476
    • (2006) Soil Biol Biochem , vol.38 , pp. 471-476
    • Cai, P.1    Huang, Q.2    Zhang, X.3    Chen, H.4
  • 24
    • 33646107637 scopus 로고    scopus 로고
    • Microcalorimetric studies on the adsorption of DNA by soil colloidal particles
    • P Cai Q Huang D Jiang X Rong W Liang 2006 Microcalorimetric studies on the adsorption of DNA by soil colloidal particles Coll Surf 49 49 54
    • (2006) Coll Surf , vol.49 , pp. 49-54
    • Cai, P.1    Huang, Q.2    Jiang, D.3    Rong, X.4    Liang, W.5
  • 25
    • 33645920996 scopus 로고    scopus 로고
    • 2 concentrations and pH on the adsorption of DNA on montmorillonite, kaolinite and goethite
    • 2 concentrations and pH on the adsorption of DNA on montmorillonite, kaolinite and goethite Appl Clay Sci 32 147 152
    • (2006) Appl Clay Sci , vol.32 , pp. 147-152
    • Cai, P.1    Huang, Q.2    Jiang, D.3    Rong, X.4    Liang, W.5
  • 26
    • 33845809596 scopus 로고    scopus 로고
    • Effects of low-molecular-weight organic ligands and phosphate on DNA adsorption by soil colloids and minerals
    • P Cai Q Huang J Zhu D Jiang X Zhou X Rong W Liang 2006 Effects of low-molecular-weight organic ligands and phosphate on DNA adsorption by soil colloids and minerals Coll Surf B Biointerfaces 53 53 59
    • (2006) Coll Surf B Biointerfaces , vol.53 , pp. 53-59
    • Cai, P.1    Huang, Q.2    Zhu, J.3    Jiang, D.4    Zhou, X.5    Rong, X.6    Liang, W.7
  • 27
    • 33646343744 scopus 로고    scopus 로고
    • Interactions of DNA with clay minerals and soil colloidal particles and protection against degradation by Dnase
    • P Cai Q Huang X Zhang 2006 Interactions of DNA with clay minerals and soil colloidal particles and protection against degradation by Dnase Environ Sci Technol 40 2971 2976
    • (2006) Environ Sci Technol , vol.40 , pp. 2971-2976
    • Cai, P.1    Huang, Q.2    Zhang, X.3
  • 28
    • 33847364447 scopus 로고    scopus 로고
    • Soil colloids bound plasmid DNA: Effect on transformation of E. coli and resistance to DNase i degradation
    • P Cai Q Huang W Chen D Zhang K Wang D Jiang W Liang 2007 Soil colloids bound plasmid DNA: effect on transformation of E. coli and resistance to DNase I degradation Soil Biol Biochem 39 1007 1013
    • (2007) Soil Biol Biochem , vol.39 , pp. 1007-1013
    • Cai, P.1    Huang, Q.2    Chen, W.3    Zhang, D.4    Wang, K.5    Jiang, D.6    Liang, W.7
  • 31
    • 0027163877 scopus 로고
    • Natural transformation of Acinetobacter calcoaceticus by plasmid DNA absorbed on sand and groundwater aquifer material
    • B Chamier MG Lorenz W Wackernagel 1993 Natural transformation of Acinetobacter calcoaceticus by plasmid DNA absorbed on sand and groundwater aquifer material Appl Environ Microbiol 59 1662 1667
    • (1993) Appl Environ Microbiol , vol.59 , pp. 1662-1667
    • Chamier, B.1    Lorenz, M.G.2    Wackernagel, W.3
  • 32
    • 0034666232 scopus 로고    scopus 로고
    • DNA stability in plant tissues: Implications for the possible transfer of genes from genetically modified foods
    • A Chiter JM Forbes GE Blair 2000 DNA stability in plant tissues: implications for the possible transfer of genes from genetically modified foods FEBS Lett 481 164 168
    • (2000) FEBS Lett , vol.481 , pp. 164-168
    • Chiter, A.1    Forbes, J.M.2    Blair, G.E.3
  • 33
    • 33846046530 scopus 로고    scopus 로고
    • 217 000-year-old DNA sequences of green sulfur bacteria in Mediterranean sapropels and their implications for the reconstruction of the paleoenvironment
    • MJL Coolen J Overmann 2007 217 000-year-old DNA sequences of green sulfur bacteria in Mediterranean sapropels and their implications for the reconstruction of the paleoenvironment Environ Microbiol 9 238 249
    • (2007) Environ Microbiol , vol.9 , pp. 238-249
    • Coolen, M.J.L.1    Overmann, J.2
  • 34
    • 12244258230 scopus 로고    scopus 로고
    • Simultaneous recovery of extracellular and intracellular DNA suitable for molecular studies from marine sediments
    • C Corinaldesi R Danovaro A dell'Anno 2005 Simultaneous recovery of extracellular and intracellular DNA suitable for molecular studies from marine sediments Appl Environ Microbiol 71 46 50
    • (2005) Appl Environ Microbiol , vol.71 , pp. 46-50
    • Corinaldesi, C.1    Danovaro, R.2    Dell'Anno, A.3
  • 35
    • 0032145163 scopus 로고    scopus 로고
    • Binding of DNA on humic acids: Effect on transformation of Bacillus subtilis and resistance to DNase
    • C Crecchio G Stotzky 1998 Binding of DNA on humic acids: effect on transformation of Bacillus subtilis and resistance to DNase Soil Biol Biochem 30 1061 1067
    • (1998) Soil Biol Biochem , vol.30 , pp. 1061-1067
    • Crecchio, C.1    Stotzky, G.2
  • 36
    • 18644374776 scopus 로고    scopus 로고
    • Binding of DNA from Bacillus subtilis on montmorillonite-humic acids-aluminum or iron hydroxypolymers: Effects on transformation and protection against DNase
    • C Crecchio P Ruggiero M Curci C Colombo G Palumbo G Stotzky 2005 Binding of DNA from Bacillus subtilis on montmorillonite-humic acids-aluminum or iron hydroxypolymers: effects on transformation and protection against DNase Soil Sci Soc Am J 69 834 841
    • (2005) Soil Sci Soc Am J , vol.69 , pp. 834-841
    • Crecchio, C.1    Ruggiero, P.2    Curci, M.3    Colombo, C.4    Palumbo, G.5    Stotzky, G.6
  • 37
    • 0022535423 scopus 로고
    • Simplified methods for dissolved DNA determination in aquatic environments
    • MF DeFlaun JH Paul D Davis 1986 Simplified methods for dissolved DNA determination in aquatic environments Appl Environ Microbiol 52 654 659
    • (1986) Appl Environ Microbiol , vol.52 , pp. 654-659
    • Deflaun, M.F.1    Paul, J.H.2    Davis, D.3
  • 38
    • 0002790939 scopus 로고
    • Distribution and molecular weight of dissolved DNA in subtropical estuarine and oceanic environments
    • MF DeFlaun JH Paul D Davis 1987 Distribution and molecular weight of dissolved DNA in subtropical estuarine and oceanic environments Mar Ecol Prog Ser 38 65 73
    • (1987) Mar Ecol Prog ser , vol.38 , pp. 65-73
    • Deflaun, M.F.1    Paul, J.H.2    Davis, D.3
  • 39
    • 3242796796 scopus 로고    scopus 로고
    • Degradation and turnover of extracellular DNA in marine sediments: Ecological and methodological considerations
    • A Dell'Anno C Corinaldesi 2004 Degradation and turnover of extracellular DNA in marine sediments: ecological and methodological considerations Appl Environ Microbiol 70 4384 4386
    • (2004) Appl Environ Microbiol , vol.70 , pp. 4384-4386
    • Dell'Anno, A.1    Corinaldesi, C.2
  • 40
    • 25844519572 scopus 로고    scopus 로고
    • Extracellular DNA plays a key role in deep sea ecosystem functioning
    • A Dell'Anno R Danovaro 2005 Extracellular DNA plays a key role in deep sea ecosystem functioning Science 139 2179
    • (2005) Science , vol.139 , pp. 2179
    • Dell'Anno, A.1    Danovaro, R.2
  • 41
    • 0036092095 scopus 로고    scopus 로고
    • Quantification, base composition, and fate of extracellular DNA in marine sediments
    • A Dell'Anno S Bomparte R Danovaro 2002 Quantification, base composition, and fate of extracellular DNA in marine sediments Limnol Oceanogr 47 899 905
    • (2002) Limnol Oceanogr , vol.47 , pp. 899-905
    • Dell'Anno, A.1    Bomparte, S.2    Danovaro, R.3
  • 42
    • 0035159370 scopus 로고    scopus 로고
    • Evaluation of biological and physical protection against nuclease degradation of clay-bound plasmid DNA
    • S Demanèche L Jocteur-Monrozier H Quiquampoix P Simonet 2001 Evaluation of biological and physical protection against nuclease degradation of clay-bound plasmid DNA Appl Environ Microbiol 67 293 299
    • (2001) Appl Environ Microbiol , vol.67 , pp. 293-299
    • Demanèche, S.1    Jocteur-Monrozier, L.2    Quiquampoix, H.3    Simonet, P.4
  • 44
    • 14644403101 scopus 로고    scopus 로고
    • Microbial horizontal gene transfer and DNA release from transgenic crop plants
    • J DeVries W Wackernagel 2004 Microbial horizontal gene transfer and DNA release from transgenic crop plants Plant Soil 266 91 104
    • (2004) Plant Soil , vol.266 , pp. 91-104
    • Devries, J.1    Wackernagel, W.2
  • 45
    • 59449105320 scopus 로고    scopus 로고
    • Spread of recombinant DNA by roots and pollen of transgenic potato plants, identified by highly specific biomonitoring using natural transformation of Acinetobacter sp
    • J DeVries M Heine K Harms W Wackernagel 2003 Spread of recombinant DNA by roots and pollen of transgenic potato plants, identified by highly specific biomonitoring using natural transformation of Acinetobacter sp Appl Environ Microbiol 56 1960 1962
    • (2003) Appl Environ Microbiol , vol.56 , pp. 1960-1962
    • Devries, J.1    Heine, M.2    Harms, K.3    Wackernagel, W.4
  • 46
    • 0034943923 scopus 로고    scopus 로고
    • A variable genetic island specific for Neisseria gonorrhoeae is involved in providing DNA for natural transformation and is found more often in disseminated infection isolates
    • JP Dillard HS Seifert 2001 A variable genetic island specific for Neisseria gonorrhoeae is involved in providing DNA for natural transformation and is found more often in disseminated infection isolates Mol Microbiol 41 263 277
    • (2001) Mol Microbiol , vol.41 , pp. 263-277
    • Dillard, J.P.1    Seifert, H.S.2
  • 48
    • 33751404864 scopus 로고    scopus 로고
    • Occurrence and persistence of Bacillus thuringiensis (Bt) and transgenic Bt corn cry1Ab gene from an aquatic environment
    • M Douville F Gagné C Blaise C André 2007 Occurrence and persistence of Bacillus thuringiensis (Bt) and transgenic Bt corn cry1Ab gene from an aquatic environment Ecotoxicol Environ Saf 66 195 203
    • (2007) Ecotoxicol Environ Saf , vol.66 , pp. 195-203
    • Douville, M.1    Gagné, F.2    Blaise, C.3    André, C.4
  • 49
    • 0032697140 scopus 로고    scopus 로고
    • DNA uptake in bacteria
    • D Dubnau 1999 DNA uptake in bacteria Annu Rev Microbiol 53 217 244
    • (1999) Annu Rev Microbiol , vol.53 , pp. 217-244
    • Dubnau, D.1
  • 50
    • 0028834888 scopus 로고
    • Aggregation of melted DNA by divalent metal ion-mediated cross-linking
    • JG Duguid VA Bloomfield 1995 Aggregation of melted DNA by divalent metal ion-mediated cross-linking Biophys J 69 2642 2648
    • (1995) Biophys J , vol.69 , pp. 2642-2648
    • Duguid, J.G.1    Bloomfield, V.A.2
  • 51
    • 0030904849 scopus 로고    scopus 로고
    • Salmonella DNA persistence in natural seawater using PCR analysis
    • E Dupray MP Caprais A Derrien P Fach 1997 Salmonella DNA persistence in natural seawater using PCR analysis J Appl Microbiol 82 507 510
    • (1997) J Appl Microbiol , vol.82 , pp. 507-510
    • Dupray, E.1    Caprais, M.P.2    Derrien, A.3    Fach, P.4
  • 52
    • 4043147912 scopus 로고    scopus 로고
    • Extraction, detection and persistence of extracellular DNA in forest litter microcosms
    • LS England ML Vincent JT Trevors SB Holmes 2004 Extraction, detection and persistence of extracellular DNA in forest litter microcosms Mol Cell Probes 18 313 319
    • (2004) Mol Cell Probes , vol.18 , pp. 313-319
    • England, L.S.1    Vincent, M.L.2    Trevors, J.T.3    Holmes, S.B.4
  • 53
    • 12944325311 scopus 로고    scopus 로고
    • Persistence of extracellular baculoviral DNA in aquatic microcosms: Extraction, purification, and amplification by the polymerase chain reaction (PCR)
    • LS England J Pollok ML Vincent D Kreutzweiser W Fick JT Trevors SB Holmes 2005 Persistence of extracellular baculoviral DNA in aquatic microcosms: extraction, purification, and amplification by the polymerase chain reaction (PCR) Mol Cell Probes 19 75 80
    • (2005) Mol Cell Probes , vol.19 , pp. 75-80
    • England, L.S.1    Pollok, J.2    Vincent, M.L.3    Kreutzweiser, D.4    Fick, W.5    Trevors, J.T.6    Holmes, S.B.7
  • 54
    • 0032500350 scopus 로고    scopus 로고
    • Early intermediates in spermidine induced DNA condensation on the surface of mica
    • Y Fang JH Hoh 1998 Early intermediates in spermidine induced DNA condensation on the surface of mica J Am Chem Soc 120 8903 8909
    • (1998) J Am Chem Soc , vol.120 , pp. 8903-8909
    • Fang, Y.1    Hoh, J.H.2
  • 55
    • 0035685198 scopus 로고    scopus 로고
    • DNA as a nutrient: Novel role for bacterial competence gene homologs
    • SE Finkel R Kolter 2001 DNA as a nutrient: novel role for bacterial competence gene homologs J Bacteriol 183 6288 6293
    • (2001) J Bacteriol , vol.183 , pp. 6288-6293
    • Finkel, S.E.1    Kolter, R.2
  • 56
    • 0028667809 scopus 로고
    • Susceptibility of soils to preferential flow of water: A field study
    • M Flury M Flühler 1994 Susceptibility of soils to preferential flow of water: a field study Water Resour Res 30 1945 1954
    • (1994) Water Resour Res , vol.30 , pp. 1945-1954
    • Flury, M.1    Flühler, M.2
  • 58
    • 0033133865 scopus 로고    scopus 로고
    • Clay-nucleic acid complexes: Characteristics and implications for the preservation of genetic material in primeval habitats
    • M Franchi E Bramanti LM Bonzi PL Orioli C Vettori E Gallori 1999 Clay-nucleic acid complexes: characteristics and implications for the preservation of genetic material in primeval habitats Orig Life Evol Biosph 29 297 315
    • (1999) Orig Life Evol Biosph , vol.29 , pp. 297-315
    • Franchi, M.1    Bramanti, E.2    Bonzi, L.M.3    Orioli, P.L.4    Vettori, C.5    Gallori, E.6
  • 59
    • 0028097206 scopus 로고
    • Plasmid transfer to indigenous marine bacterial populations by natural transformation
    • ME Frischer GJ Stewart JH Paul 1994 Plasmid transfer to indigenous marine bacterial populations by natural transformation FEMS Microbiol Ecol 15 127 136
    • (1994) FEMS Microbiol Ecol , vol.15 , pp. 127-136
    • Frischer, M.E.1    Stewart, G.J.2    Paul, J.H.3
  • 60
    • 0033670979 scopus 로고    scopus 로고
    • Distribution of microbial biomass and phospholipid fatty acids in Podzol profiles under coniferous forest
    • H Fritze J Pietikäinen T Pennanen 2000 Distribution of microbial biomass and phospholipid fatty acids in Podzol profiles under coniferous forest Eur J Soil Sci 51 565 573
    • (2000) Eur J Soil Sci , vol.51 , pp. 565-573
    • Fritze, H.1    Pietikäinen, J.2    Pennanen, T.3
  • 62
    • 0033008418 scopus 로고    scopus 로고
    • Monitoring field release of genetically modified sugar beets for persistence of transgenic plant DNA and horizontal gene transfer
    • F Gebhard K Smalla 1999 Monitoring field release of genetically modified sugar beets for persistence of transgenic plant DNA and horizontal gene transfer FEMS Microbiol Ecol 28 261 272
    • (1999) FEMS Microbiol Ecol , vol.28 , pp. 261-272
    • Gebhard, F.1    Smalla, K.2
  • 64
    • 0001394226 scopus 로고
    • The adsorption of nucleic acids by montmorillonite
    • MP Greaves MJ Wilson 1969 The adsorption of nucleic acids by montmorillonite Soil Biol Biochem 1 317 323
    • (1969) Soil Biol Biochem , vol.1 , pp. 317-323
    • Greaves, M.P.1    Wilson, M.J.2
  • 66
    • 0343619499 scopus 로고    scopus 로고
    • A unified theory of the B-Z transition of DNA in high and low concentrations of multivalent ions
    • M Gueron J Demaret M Filoche 2000 A unified theory of the B-Z transition of DNA in high and low concentrations of multivalent ions Biophys J 78 1070 1083
    • (2000) Biophys J , vol.78 , pp. 1070-1083
    • Gueron, M.1    Demaret, J.2    Filoche, M.3
  • 68
    • 0345269196 scopus 로고    scopus 로고
    • Natural genetic transformation in monoculture Acinetobacter sp. BD413 biofilms
    • L Hendrickx M Hausner S Wuertz 2003 Natural genetic transformation in monoculture Acinetobacter sp. BD413 biofilms Appl Environ Microbiol 69 1721 1727
    • (2003) Appl Environ Microbiol , vol.69 , pp. 1721-1727
    • Hendrickx, L.1    Hausner, M.2    Wuertz, S.3
  • 71
    • 0842309183 scopus 로고    scopus 로고
    • Persistence of DNA of Gaeumannomyces graminis var. tritici in soil as measured by a DNA-based assay
    • SN Herdina S Jabaji-Hare K Ophel- Keller 2004 Persistence of DNA of Gaeumannomyces graminis var. tritici in soil as measured by a DNA-based assay FEMS Microbiol Ecol 47 143 152
    • (2004) FEMS Microbiol Ecol , vol.47 , pp. 143-152
    • Herdina, S.N.1    Jabaji-Hare, S.2    Ophel- Keller, K.3
  • 73
    • 84986815830 scopus 로고
    • The measurement and distribution of dissolved nucleic acids in aquatic environments
    • DM Karl MD Bailiff 1989 The measurement and distribution of dissolved nucleic acids in aquatic environments Limnol Oceanogr 34 543 558
    • (1989) Limnol Oceanogr , vol.34 , pp. 543-558
    • Karl, D.M.1    Bailiff, M.D.2
  • 74
    • 0026638675 scopus 로고
    • Transformation of Bacillus subtilis by DNA bound on montmorillonite and effect of DNase on the transforming ability of bound DNA
    • M Khanna G Stotzky 1992 Transformation of Bacillus subtilis by DNA bound on montmorillonite and effect of DNase on the transforming ability of bound DNA Appl Environ Microbiol 58 1930 1939
    • (1992) Appl Environ Microbiol , vol.58 , pp. 1930-1939
    • Khanna, M.1    Stotzky, G.2
  • 75
    • 0012427845 scopus 로고    scopus 로고
    • X-ray diffractometry and electron microscopy of DNA from Bacillus subtilis bound on clay minerals
    • Online journal, website:
    • Khanna M, Yoder L, Calamai L, Stotzky G (1998) X-ray diffractometry and electron microscopy of DNA from Bacillus subtilis bound on clay minerals. Science of Soils 3(1) Online journal, website: http://link.springer.de/link/ service/journals/10112/fpapers/8003001/80030001.htm
    • (1998) Science of Soils , vol.3 , Issue.1
    • Khanna, M.1    Yoder, L.2    Calamai, L.3    Stotzky, G.4
  • 76
    • 33845603602 scopus 로고    scopus 로고
    • Comparative analysis of environmental DNA extraction and purification methods from different Humic acids-rich soil
    • FM LaKay A Botha BA Prior 2007 Comparative analysis of environmental DNA extraction and purification methods from different Humic acids-rich soil J Appl Microbiol 102 265 273
    • (2007) J Appl Microbiol , vol.102 , pp. 265-273
    • Lakay, F.M.1    Botha, A.2    Prior, B.A.3
  • 78
    • 0036233112 scopus 로고    scopus 로고
    • A quorum sensing signalling system essential for genetic competence in Streptococcus mutans is involved in biofilm formation
    • Y-H Li N Tang MB Aspiras P Lau JH Lee RP Ellen DG Cvitkovitch 2002 A quorum sensing signalling system essential for genetic competence in Streptococcus mutans is involved in biofilm formation J Bacteriol 184 2699 2708
    • (2002) J Bacteriol , vol.184 , pp. 2699-2708
    • Li, Y.-H.1    Tang, N.2    Aspiras, M.B.3    Lau, P.4    Lee, J.H.5    Ellen, R.P.6    Cvitkovitch, D.G.7
  • 79
    • 0023504650 scopus 로고
    • Adsorption of DNA to sand and variable degradation rates of adsorbed DNA
    • M Lorenz W Wackernagel 1987 Adsorption of DNA to sand and variable degradation rates of adsorbed DNA Appl Environ Microbiol 53 2948 2952
    • (1987) Appl Environ Microbiol , vol.53 , pp. 2948-2952
    • Lorenz, M.1    Wackernagel, W.2
  • 80
    • 0025076453 scopus 로고
    • Natural genetic transformation of Pseudomonas stutzeri by sand-absorbed DNA
    • MG Lorenz W Wackernagel 1990 Natural genetic transformation of Pseudomonas stutzeri by sand-absorbed DNA Arch Microbiol 154 380 385
    • (1990) Arch Microbiol , vol.154 , pp. 380-385
    • Lorenz, M.G.1    Wackernagel, W.2
  • 81
    • 0025731192 scopus 로고
    • High frequency of natural genetic transformation of Pseudomonas stutzeri in soil extract supplemented with carbon7energy and phosphorus source
    • MG Lorenz W Wackernagel 1991 High frequency of natural genetic transformation of Pseudomonas stutzeri in soil extract supplemented with carbon7energy and phosphorus source Appl Environ Microbiol 57 1246 1251
    • (1991) Appl Environ Microbiol , vol.57 , pp. 1246-1251
    • Lorenz, M.G.1    Wackernagel, W.2
  • 82
    • 0028136885 scopus 로고
    • Bacterial gene transfer by natural genetic transformation in the environment
    • MG Lorenz W Wackernagel 1994 Bacterial gene transfer by natural genetic transformation in the environment Microbiol Rev 58 563 602
    • (1994) Microbiol Rev , vol.58 , pp. 563-602
    • Lorenz, M.G.1    Wackernagel, W.2
  • 83
    • 18144432612 scopus 로고
    • Highly efficient genetic transformation of Bacillus subtilis attached to sand grains
    • M Lorenz BW Aardema W Wackernagel 1988 Highly efficient genetic transformation of Bacillus subtilis attached to sand grains J Gen Microbiol 134 107 112
    • (1988) J Gen Microbiol , vol.134 , pp. 107-112
    • Lorenz, M.1    Aardema, B.W.2    Wackernagel, W.3
  • 84
    • 0025868317 scopus 로고
    • Release of transforming plasmid and chromosomal DNA from two cultured soil bacteria
    • MG Lorenz D Gerjets W Wackernagel 1991 Release of transforming plasmid and chromosomal DNA from two cultured soil bacteria Arch Microbiol 156 319 326
    • (1991) Arch Microbiol , vol.156 , pp. 319-326
    • Lorenz, M.G.1    Gerjets, D.2    Wackernagel, W.3
  • 85
    • 0031063820 scopus 로고    scopus 로고
    • Gene transfer by electroporation
    • PF Lurquin 1997 Gene transfer by electroporation Mol Biotechnol 7 5 35
    • (1997) Mol Biotechnol , vol.7 , pp. 5-35
    • Lurquin, P.F.1
  • 86
    • 11244324812 scopus 로고    scopus 로고
    • Microbial diversity in soil: Ecological theories, the contribution of molecular techniques and the impact of transgenic plants and transgenic microorganisms
    • JM Lynch A Benedetti H Insam MP Nuti K Smalla V Torsvik P Nannipieri 2004 Microbial diversity in soil: ecological theories, the contribution of molecular techniques and the impact of transgenic plants and transgenic microorganisms Biol Fertil Soils 40 363 385
    • (2004) Biol Fertil Soils , vol.40 , pp. 363-385
    • Lynch, J.M.1    Benedetti, A.2    Insam, H.3    Nuti, M.P.4    Smalla, K.5    Torsvik, V.6    Nannipieri, P.7
  • 87
    • 0028142683 scopus 로고
    • Condensation of supercoiled DNA induced by MnCl2
    • C Ma VA Bloomfield 1994 Condensation of supercoiled DNA induced by MnCl2 Biophys J 67 1678 1681
    • (1994) Biophys J , vol.67 , pp. 1678-1681
    • Ma, C.1    Bloomfield, V.A.2
  • 88
    • 0032783338 scopus 로고    scopus 로고
    • Extractable dsDNA and product formation as measures of microbial growth in soil upon substrate addition
    • H Marstorp E Witter 1999 Extractable dsDNA and product formation as measures of microbial growth in soil upon substrate addition Soil Biol Biochem 31 1443 1453
    • (1999) Soil Biol Biochem , vol.31 , pp. 1443-1453
    • Marstorp, H.1    Witter, E.2
  • 89
    • 33748801467 scopus 로고    scopus 로고
    • Quantitative determination of Free-DNA uptake in river bacteria at the single-cell level by in situ rolling-circle amplification
    • F Maruyama K Tani T Kenzaka N Yamaguchi M Nasu 2006 Quantitative determination of Free-DNA uptake in river bacteria at the single-cell level by in situ rolling-circle amplification Appl Environ Microbiol 72 6248 6256
    • (2006) Appl Environ Microbiol , vol.72 , pp. 6248-6256
    • Maruyama, F.1    Tani, K.2    Kenzaka, T.3    Yamaguchi, N.4    Nasu, M.5
  • 90
    • 0035955542 scopus 로고    scopus 로고
    • Estimation of the fate of dissolved DNA in thermally stratified lake water from stability of exogenous plasmid DNA
    • K Matsui M Honjo Z Kawabata 2001 Estimation of the fate of dissolved DNA in thermally stratified lake water from stability of exogenous plasmid DNA Aquat Microb Ecol 26 95 102
    • (2001) Aquat Microb Ecol , vol.26 , pp. 95-102
    • Matsui, K.1    Honjo, M.2    Kawabata, Z.3
  • 91
    • 0242416598 scopus 로고    scopus 로고
    • Release of extracellular transformable plasmid DNA from Escherichia coli cocultivated with algae
    • K Matsui N Ishii Z Kawabata 2003 Release of extracellular transformable plasmid DNA from Escherichia coli cocultivated with algae Appl Environ Microbiol 69 2399 2404
    • (2003) Appl Environ Microbiol , vol.69 , pp. 2399-2404
    • Matsui, K.1    Ishii, N.2    Kawabata, Z.3
  • 92
    • 0034018438 scopus 로고    scopus 로고
    • The Pseudomonas quinolone signal regulates rhl quorum sensing in Pseudomonas aeruginosa
    • SL McKnight BH Iglewski EC Pesci 2000 The Pseudomonas quinolone signal regulates rhl quorum sensing in Pseudomonas aeruginosa J Bacteriol 182 2702 2708
    • (2000) J Bacteriol , vol.182 , pp. 2702-2708
    • McKnight, S.L.1    Iglewski, B.H.2    Pesci, E.C.3
  • 96
    • 0038820050 scopus 로고    scopus 로고
    • Gene transfer occurs with enhanced efficiency in biofilms and induces enhanced stabilization of the biofilm structure
    • S Molin T Tolker-Nielsen 2003 Gene transfer occurs with enhanced efficiency in biofilms and induces enhanced stabilization of the biofilm structure Curr Opin Biotechnol 14 255 261
    • (2003) Curr Opin Biotechnol , vol.14 , pp. 255-261
    • Molin, S.1    Tolker-Nielsen, T.2
  • 97
    • 33846424556 scopus 로고    scopus 로고
    • Plasmid DNA adsorption on silica: Kinetics and conformational changes in monovalent and divalent salts
    • TH Nguyen M Elimelech 2007 Plasmid DNA adsorption on silica: kinetics and conformational changes in monovalent and divalent salts Biomacromolecules 8 24 32
    • (2007) Biomacromolecules , vol.8 , pp. 24-32
    • Nguyen, T.H.1    Elimelech, M.2
  • 98
    • 33947434496 scopus 로고    scopus 로고
    • Adsorption of plasmid DNA to natural organic matter coated silica surface: Kinetics, conformation, and reversibility
    • TH Nguyen M Elimelech 2007 Adsorption of plasmid DNA to natural organic matter coated silica surface: kinetics, conformation, and reversibility Langmuir 23 3273 3279
    • (2007) Langmuir , vol.23 , pp. 3273-3279
    • Nguyen, T.H.1    Elimelech, M.2
  • 99
    • 4444327429 scopus 로고    scopus 로고
    • An assessment of factors affecting the likelihood of horizontal transfer of recombinant plant DNA to bacterial recipients in the soil and rhizosphere
    • ICGEB, Italy
    • Nielsen KM (2003) An assessment of factors affecting the likelihood of horizontal transfer of recombinant plant DNA to bacterial recipients in the soil and rhizosphere. Collection of Biosafety Reviews, vol 1. ICGEB, Italy, pp 96-149
    • (2003) Collection of Biosafety Reviews , vol.1 , pp. 96-149
    • Nielsen, K.M.1
  • 100
    • 0033989223 scopus 로고    scopus 로고
    • Natural transformation of Acinetobacter sp. strain BD413 with cell lysates of Acinetobacter sp., Pseudomonas fluorescens and Burkholderia cepacia in soil microcosms
    • KM Nielsen K Smalla JD van Elsas 2000 Natural transformation of Acinetobacter sp. strain BD413 with cell lysates of Acinetobacter sp., Pseudomonas fluorescens and Burkholderia cepacia in soil microcosms Appl Environ Microbiol 66 206 212
    • (2000) Appl Environ Microbiol , vol.66 , pp. 206-212
    • Nielsen, K.M.1    Smalla, K.2    Van Elsas, J.D.3
  • 101
    • 0040744543 scopus 로고    scopus 로고
    • Dynamics, horizontal transfer and selection of novel DNA in bacterial populations in the phytosphere of transgenic plants
    • KM Nielsen JD van Elsas K Smalla 2001 Dynamics, horizontal transfer and selection of novel DNA in bacterial populations in the phytosphere of transgenic plants Ann Microbiol 51 79 94
    • (2001) Ann Microbiol , vol.51 , pp. 79-94
    • Nielsen, K.M.1    Van Elsas, J.D.2    Smalla, K.3
  • 107
    • 12744281935 scopus 로고
    • The extraction and purification of microbial DNA from sediments
    • A Ogram GS Sayler T Barkay 1987 The extraction and purification of microbial DNA from sediments J Microbiol Methods 7 57 66
    • (1987) J Microbiol Methods , vol.7 , pp. 57-66
    • Ogram, A.1    Sayler, G.S.2    Barkay, T.3
  • 110
    • 0028072252 scopus 로고
    • On the track of natural transformation in soil
    • E Paget P Simonet 1994 On the track of natural transformation in soil FEMS Microbiol Ecol 15 109 118
    • (1994) FEMS Microbiol Ecol , vol.15 , pp. 109-118
    • Paget, E.1    Simonet, P.2
  • 111
    • 0031049630 scopus 로고    scopus 로고
    • Development of engineered genomic DNA to monitor the natural transformation of Pseudomonas stutzeri in soil like microcosms
    • E Paget P Simonet 1997 Development of engineered genomic DNA to monitor the natural transformation of Pseudomonas stutzeri in soil like microcosms Can J Microbiol 43 78 84
    • (1997) Can J Microbiol , vol.43 , pp. 78-84
    • Paget, E.1    Simonet, P.2
  • 112
    • 0026793353 scopus 로고
    • Adsorption of DNA on clay minerals: Protection against DNase i and influence on gene transfer
    • E Paget L Jocteur Monrozier P Simonet 1992 Adsorption of DNA on clay minerals: protection against DNase I and influence on gene transfer FEMS Microbiol Lett 97 31 40
    • (1992) FEMS Microbiol Lett , vol.97 , pp. 31-40
    • Paget, E.1    Jocteur Monrozier, L.2    Simonet, P.3
  • 114
    • 0028910050 scopus 로고
    • Acinetobacter calcoaceticus liberates chromosomal DNA during induction of competence by cell lysis
    • R Palmen KJ Hellingwerf 1995 Acinetobacter calcoaceticus liberates chromosomal DNA during induction of competence by cell lysis Curr Microbiol 30 7 10
    • (1995) Curr Microbiol , vol.30 , pp. 7-10
    • Palmen, R.1    Hellingwerf, K.J.2
  • 115
    • 59449110669 scopus 로고    scopus 로고
    • Extracellular DNA in soils: Quantitative assessment, binding to soil and resistance to degradation.
    • General Assembly, Wien, 15-20 April
    • Panikov NS (2007) Extracellular DNA in soils: quantitative assessment, binding to soil and resistance to degradation. Proceeding of European Geosciences Union (EGU), General Assembly, Wien, 15-20 April 2007
    • (2007) Proceeding of European Geosciences Union (EGU)
    • Panikov, N.S.1
  • 116
    • 59449105844 scopus 로고    scopus 로고
    • Natural transformation in aquatic environments
    • Kluwer, The Netherlands, 5.01:1047-1068
    • Paul J, Williams H (2004) Natural transformation in aquatic environments. Molecular microbial ecology manual, 2nd edn. Kluwer, The Netherlands, 5.01:1047-1068
    • (2004) Molecular Microbial Ecology Manual, 2nd Edn.
    • Paul, J.1    Williams, H.2
  • 117
    • 0003149711 scopus 로고
    • Elevated levels of microbial activity in the coral surface microlayer
    • JH Paul MF DeFlaun WH Jeffrey 1986 Elevated levels of microbial activity in the coral surface microlayer Mar Ecol Prog Ser 33 29 40
    • (1986) Mar Ecol Prog ser , vol.33 , pp. 29-40
    • Paul, J.H.1    Deflaun, M.F.2    Jeffrey, W.H.3
  • 119
    • 0025754178 scopus 로고
    • Gene transfer in marine water column and sediment microcosms by natural plasmid transformation
    • JH Paul ME Frischer JM Thurmond 1991 Gene transfer in marine water column and sediment microcosms by natural plasmid transformation Appl Environ Microbiol 57 1509 1515
    • (1991) Appl Environ Microbiol , vol.57 , pp. 1509-1515
    • Paul, J.H.1    Frischer, M.E.2    Thurmond, J.M.3
  • 120
    • 0026864390 scopus 로고
    • Intergenic natural plasmid transformation between E. coli and a marine Vibrio species
    • JH Paul ME Frischer JM Thurmond 1992 Intergenic natural plasmid transformation between E. coli and a marine Vibrio species Mol Ecol 1 37 46
    • (1992) Mol Ecol , vol.1 , pp. 37-46
    • Paul, J.H.1    Frischer, M.E.2    Thurmond, J.M.3
  • 122
    • 0030695483 scopus 로고    scopus 로고
    • Effects of air drying and wetting cycles on the transforming ability of DNA bound on clay minerals
    • G Pietramellara L Dal Canto C Vettori E Gallori P Nannipieri 1997 Effects of air drying and wetting cycles on the transforming ability of DNA bound on clay minerals Soil Biol Biochem 29 55 61
    • (1997) Soil Biol Biochem , vol.29 , pp. 55-61
    • Pietramellara, G.1    Dal Canto, L.2    Vettori, C.3    Gallori, E.4    Nannipieri, P.5
  • 123
    • 0000912830 scopus 로고    scopus 로고
    • Effect of molecular characteristics of DNA on its adsorption and binding on homoionic montmorillonite and kaolinite
    • G Pietramellara M Franchi E Gallori P Nannipieri 2001 Effect of molecular characteristics of DNA on its adsorption and binding on homoionic montmorillonite and kaolinite Biol Fertil Soils 33 402 409
    • (2001) Biol Fertil Soils , vol.33 , pp. 402-409
    • Pietramellara, G.1    Franchi, M.2    Gallori, E.3    Nannipieri, P.4
  • 125
    • 33745787719 scopus 로고    scopus 로고
    • Persistence of transgenic and not transgenic extracellular DNA in soil and bacterial transformation
    • G Pietramellara MT Ceccherini J Ascher P Nannipieri 2006 Persistence of transgenic and not transgenic extracellular DNA in soil and bacterial transformation Biol Forum 1 37 68
    • (2006) Biol Forum , vol.1 , pp. 37-68
    • Pietramellara, G.1    Ceccherini, M.T.2    Ascher, J.3    Nannipieri, P.4
  • 128
    • 0034620331 scopus 로고    scopus 로고
    • Differences between linear chromosomal and supercoiled plasmid DNA in their mechanisms and extent of adsorption on clay minerals
    • F Poly C Chenou P Simonet J Rouiller L Jocteur Monrozier 2000 Differences between linear chromosomal and supercoiled plasmid DNA in their mechanisms and extent of adsorption on clay minerals Langmuir 16 1233 1238
    • (2000) Langmuir , vol.16 , pp. 1233-1238
    • Poly, F.1    Chenou, C.2    Simonet, P.3    Rouiller, J.4    Jocteur Monrozier, L.5
  • 132
    • 0034803155 scopus 로고    scopus 로고
    • Quantitative and qualitative microscale distribution of bacteria in soil
    • L Ranjard A Richaume 2001 Quantitative and qualitative microscale distribution of bacteria in soil Res Microbiol 152 707 716
    • (2001) Res Microbiol , vol.152 , pp. 707-716
    • Ranjard, L.1    Richaume, A.2
  • 135
    • 0025804888 scopus 로고
    • Adsorption of plasmid DNA to mineral surfaces and protection against DNaseI
    • G Romanowski MG Lorenz W Wackernagel 1991 Adsorption of plasmid DNA to mineral surfaces and protection against DNaseI Appl Environ Microbiol 57 1057 1061
    • (1991) Appl Environ Microbiol , vol.57 , pp. 1057-1061
    • Romanowski, G.1    Lorenz, M.G.2    Wackernagel, W.3
  • 136
    • 0033837548 scopus 로고    scopus 로고
    • Identification and characterization of nuclease activities in anaerobic environmental samples
    • TR Ruiz S Andrews GB Smith 2000 Identification and characterization of nuclease activities in anaerobic environmental samples Can J Microbiol 46 736 740
    • (2000) Can J Microbiol , vol.46 , pp. 736-740
    • Ruiz, T.R.1    Andrews, S.2    Smith, G.B.3
  • 137
  • 138
    • 33748637544 scopus 로고    scopus 로고
    • Membrane vesicles: An overlooked component of the matrices of biofilms
    • SR Schooling TJ Beveridge 2006 Membrane vesicles: an overlooked component of the matrices of biofilms J Bacteriol 188 5945 5957
    • (2006) J Bacteriol , vol.188 , pp. 5945-5957
    • Schooling, S.R.1    Beveridge, T.J.2
  • 140
    • 0026870117 scopus 로고
    • Direct recovery and molecular analysis of DNA and RNA from soil
    • S Selenska W Klingmueller 1992 Direct recovery and molecular analysis of DNA and RNA from soil Microb Releases 1 41 46
    • (1992) Microb Releases , vol.1 , pp. 41-46
    • Selenska, S.1    Klingmueller, W.2
  • 141
    • 59449103800 scopus 로고    scopus 로고
    • Soil hydrophobicity: Preliminary results of an investigation of the effect of grain size and percentage of hydrophobic grains in a model system
    • European Geosciences Union
    • Shirtcliffe N, McHale G, Newton M, Pyatt B (2005) Soil hydrophobicity: preliminary results of an investigation of the effect of grain size and percentage of hydrophobic grains in a model system. Proceeding of Geophysical Research Abstracts, vol 7, pp 607-7962. European Geosciences Union
    • (2005) Proceeding of Geophysical Research Abstracts , vol.7 , pp. 607-7962
    • Shirtcliffe, N.1    McHale, G.2    Newton, M.3    Pyatt, B.4
  • 142
    • 0037216828 scopus 로고    scopus 로고
    • Sequence dependent DNA condensation and the electrostatic zipper
    • JC Sitko EM Mateescu HG Hansma 2003 Sequence dependent DNA condensation and the electrostatic zipper Biophys J 84 419 431
    • (2003) Biophys J , vol.84 , pp. 419-431
    • Sitko, J.C.1    Mateescu, E.M.2    Hansma, H.G.3
  • 143
    • 0001776426 scopus 로고    scopus 로고
    • Distribution and origin of dissolved DNA in lakes of different trophic states
    • W Siuda RJ Chrost H Gude 1998 Distribution and origin of dissolved DNA in lakes of different trophic states Aquat Microb Ecol 15 89 96
    • (1998) Aquat Microb Ecol , vol.15 , pp. 89-96
    • Siuda, W.1    Chrost, R.J.2    Gude, H.3
  • 144
    • 0034737223 scopus 로고    scopus 로고
    • Concentration and susceptibility of dissolved DNA for enzyme degradation in lake water-some methodological remarks
    • W Siuda RJ Chrost H Gude 2000 Concentration and susceptibility of dissolved DNA for enzyme degradation in lake water-some methodological remarks Aquat Microb Ecol 21 195 201
    • (2000) Aquat Microb Ecol , vol.21 , pp. 195-201
    • Siuda, W.1    Chrost, R.J.2    Gude, H.3
  • 145
    • 0033014645 scopus 로고    scopus 로고
    • Analysis of fungal diversity in the wheat rhizosphere by sequencing of cloned PCR-amplified genes encoding 18S rRNA and temperature gradient gel electrophoresis
    • E Smit P Leeflang B Glandorf JD van Elsas K Wernars 1999 Analysis of fungal diversity in the wheat rhizosphere by sequencing of cloned PCR-amplified genes encoding 18S rRNA and temperature gradient gel electrophoresis Appl Environ Microbiol 65 2514 2621
    • (1999) Appl Environ Microbiol , vol.65 , pp. 2514-2621
    • Smit, E.1    Leeflang, P.2    Glandorf, B.3    Van Elsas, J.D.4    Wernars, K.5
  • 146
    • 0029974543 scopus 로고    scopus 로고
    • Who's competent and when: Regulation of natural genetic competence in bacteria
    • JM Solomon AD Grossman 1996 Who's competent and when: regulation of natural genetic competence in bacteria Trends Genet 12 150 155
    • (1996) Trends Genet , vol.12 , pp. 150-155
    • Solomon, J.M.1    Grossman, A.D.2
  • 147
    • 0013974742 scopus 로고    scopus 로고
    • Genetic transformation of Neisseria gonorrhoeae to streptomycin resistance
    • PF Sparling 1996 Genetic transformation of Neisseria gonorrhoeae to streptomycin resistance J Bacteriol 92 1364 1371
    • (1996) J Bacteriol , vol.92 , pp. 1364-1371
    • Sparling, P.F.1
  • 148
    • 0028945483 scopus 로고
    • Importance of Coulombic end effects on cation accumulation near oligoelectrolyte B-DNA: A demonstration using 23Na NMR
    • VM Stein JF Bond MW Capp CF Anderson TM Record Jr 1995 Importance of Coulombic end effects on cation accumulation near oligoelectrolyte B-DNA: a demonstration using 23Na NMR Biophys J 68 1063 1072
    • (1995) Biophys J , vol.68 , pp. 1063-1072
    • Stein, V.M.1    Bond, J.F.2    Capp, M.W.3    Anderson, C.F.4    Record Jr, T.M.5
  • 149
    • 25144479404 scopus 로고    scopus 로고
    • Extracellular DNA in single- and multiple-species unsaturated biofilms
    • RE Steinberger PA Holden 2005 Extracellular DNA in single- and multiple-species unsaturated biofilms Appl Environ Microbiol 71 5404 5410
    • (2005) Appl Environ Microbiol , vol.71 , pp. 5404-5410
    • Steinberger, R.E.1    Holden, P.A.2
  • 150
    • 0036561056 scopus 로고    scopus 로고
    • Elongation correlates with nutrient deprivation in Pseudomonas aeruginosa unsaturated biofilms
    • RE Steinberger AR Allen HG Hansma PA Holden 2002 Elongation correlates with nutrient deprivation in Pseudomonas aeruginosa unsaturated biofilms Microb Ecol 43 416 423
    • (2002) Microb Ecol , vol.43 , pp. 416-423
    • Steinberger, R.E.1    Allen, A.R.2    Hansma, H.G.3    Holden, P.A.4
  • 151
    • 0037188501 scopus 로고    scopus 로고
    • Induction of natural competence in Streptococcus pneumoniae triggers lysis and DNA release from a subfraction of the cell population
    • H Steinmoen E Knutsen LS Havarstein 2002 Induction of natural competence in Streptococcus pneumoniae triggers lysis and DNA release from a subfraction of the cell population Proc Natl Acad Sci U S A 99 7681 7686
    • (2002) Proc Natl Acad Sci U S A , vol.99 , pp. 7681-7686
    • Steinmoen, H.1    Knutsen, E.2    Havarstein, L.S.3
  • 154
    • 0001143207 scopus 로고
    • Influence of soil mineral colloids on metabolic process, growth, adhesion, and ecology of microbes and viruses
    • Soil Science Society of Americans Madison, WI
    • Stotzky G (1986) Influence of soil mineral colloids on metabolic process, growth, adhesion, and ecology of microbes and viruses. In: Huang PM, Schnitzer M (eds) Interactions of soil minerals with natural organics and microbes. Soil Science Society of Americans, Madison, WI, pp 305-428
    • (1986) Interactions of Soil Minerals with Natural Organics and Microbes , pp. 305-428
    • Stotzky, G.1    Huang, P.M.2    Schnitzer, M.3
  • 155
    • 0001833934 scopus 로고
    • The research for correlation between theoretical and experimental growth yields
    • AH Stouthamer 1979 The research for correlation between theoretical and experimental growth yields Intern Rev Biochem 21 1 47
    • (1979) Intern Rev Biochem , vol.21 , pp. 1-47
    • Stouthamer, A.H.1
  • 156
    • 0036126553 scopus 로고    scopus 로고
    • The divalent cation induced DNA condensation studied by atomic force microscopy and spectra analysis
    • XG Sun EH Cao XY Zhang D Liu C Bai 2002 The divalent cation induced DNA condensation studied by atomic force microscopy and spectra analysis Inorg Chem Commun 5 181 186
    • (2002) Inorg Chem Commun , vol.5 , pp. 181-186
    • Sun, X.G.1    Cao, E.H.2    Zhang, X.Y.3    Liu, D.4    Bai, C.5
  • 157
    • 0035340694 scopus 로고    scopus 로고
    • The biofilm matrix: An immobilized but dynamic microbial environment
    • IW Sutherland 2001 The biofilm matrix: an immobilized but dynamic microbial environment Trends Microbiol 9 222 227
    • (2001) Trends Microbiol , vol.9 , pp. 222-227
    • Sutherland, I.W.1
  • 158
    • 0033572257 scopus 로고    scopus 로고
    • Selective cleaning of the cell debris in human chromosome preparations studied by scanning force microscopy
    • J Tamayo M Miles A Thein P Soothill 1999 Selective cleaning of the cell debris in human chromosome preparations studied by scanning force microscopy J Struct Biol 128 200 210
    • (1999) J Struct Biol , vol.128 , pp. 200-210
    • Tamayo, J.1    Miles, M.2    Thein, A.3    Soothill, P.4
  • 159
    • 0035116157 scopus 로고    scopus 로고
    • DNase-resistant DNA in the extracellular and cell wall-associated fractions of Frankia strains R43 and CcI3
    • F Tavares A Sellsted 2001 DNase-resistant DNA in the extracellular and cell wall-associated fractions of Frankia strains R43 and CcI3 Curr Microbiol 42 168 172
    • (2001) Curr Microbiol , vol.42 , pp. 168-172
    • Tavares, F.1    Sellsted, A.2
  • 161
    • 23944475626 scopus 로고    scopus 로고
    • Mechanisms and barriers to horizontal gene transfer between bacteria
    • CM Thomas KM Nielsen 2005 Mechanisms and barriers to horizontal gene transfer between bacteria Nat Rev Microbiol 3 711 721
    • (2005) Nat Rev Microbiol , vol.3 , pp. 711-721
    • Thomas, C.M.1    Nielsen, K.M.2
  • 162
    • 0027304446 scopus 로고
    • Inactivation of YME1, a number of the ftsH-SEC18-PAS1-CDC48 family of putative ATPase-encoding genes, causes increased escape of DNA from mitochondria in Saccharomyces cerevisiae
    • PE Thorsness KH With D Fox 1993 Inactivation of YME1, a number of the ftsH-SEC18-PAS1-CDC48 family of putative ATPase-encoding genes, causes increased escape of DNA from mitochondria in Saccharomyces cerevisiae Mol Cell Biol 13 5418 5426
    • (1993) Mol Cell Biol , vol.13 , pp. 5418-5426
    • Thorsness, P.E.1    With, K.H.2    Fox, D.3
  • 163
    • 0002683139 scopus 로고
    • Determination of bacterial DNA in soil
    • V Torsvik J Goksøyr 1978 Determination of bacterial DNA in soil Soil Biol Biochem 10 7 12
    • (1978) Soil Biol Biochem , vol.10 , pp. 7-12
    • Torsvik, V.1    Goksøyr, J.2
  • 164
    • 25844480781 scopus 로고    scopus 로고
    • Phosphorus cycling in wetland soils: The importance of phosphate diesters
    • B Turner S Newman 2005 Phosphorus cycling in wetland soils: the importance of phosphate diesters J Environ Qual 34 1921 1929
    • (2005) J Environ Qual , vol.34 , pp. 1921-1929
    • Turner, B.1    Newman, S.2
  • 165
    • 1842812535 scopus 로고    scopus 로고
    • Phosphorus compounds in subartic Fennoscandian soils at the mountain birch (Betula pubescens)-tundra ecotone
    • B Turner R Baxter N Mahieu S Sjögersten B Whitton 2004 Phosphorus compounds in subartic Fennoscandian soils at the mountain birch (Betula pubescens)-tundra ecotone Soil Biol Biochem 36 815 823
    • (2004) Soil Biol Biochem , vol.36 , pp. 815-823
    • Turner, B.1    Baxter, R.2    Mahieu, N.3    Sjögersten, S.4    Whitton, B.5
  • 166
    • 0034672742 scopus 로고    scopus 로고
    • Analysis of the dynamics of fungal communities in soil via fungal-specific PCR of soil DNA followed by denaturing gradient gel electrophoresis
    • JD Van Elsas GF Duarte A Keijzer-Wolters E Smit 2000 Analysis of the dynamics of fungal communities in soil via fungal-specific PCR of soil DNA followed by denaturing gradient gel electrophoresis J Microbiol Methods 43 133 151
    • (2000) J Microbiol Methods , vol.43 , pp. 133-151
    • Van Elsas, J.D.1    Duarte, G.F.2    Keijzer-Wolters, A.3    Smit, E.4
  • 167
    • 0030218539 scopus 로고    scopus 로고
    • Amplification by random amplified polymorphic DNA (RAPD) technique of bacterial DNA bound on clay minerals
    • C Vettori D Paffetti G Pietramellara G Stotzky E Gallori 1996 Amplification by random amplified polymorphic DNA (RAPD) technique of bacterial DNA bound on clay minerals FEMS Microbiol Ecol 20 251 260
    • (1996) FEMS Microbiol Ecol , vol.20 , pp. 251-260
    • Vettori, C.1    Paffetti, D.2    Pietramellara, G.3    Stotzky, G.4    Gallori, E.5
  • 168
    • 0024296644 scopus 로고
    • Sequence and expression of NUC1, the gene encoding the mitochondrial nuclease in Saccharomyces cerevisiae
    • RD Vincent TT Hofmann HP Zassenhaus 1988 Sequence and expression of NUC1, the gene encoding the mitochondrial nuclease in Saccharomyces cerevisiae Nucleic Acids Res 16 3297 3312
    • (1988) Nucleic Acids Res , vol.16 , pp. 3297-3312
    • Vincent, R.D.1    Hofmann, T.T.2    Zassenhaus, H.P.3
  • 169
    • 33745788375 scopus 로고    scopus 로고
    • The various sources and the fate of nucleic acids in soil
    • Springer Berlin, Germany
    • Wackernagel W (2006) The various sources and the fate of nucleic acids in soil. In: Nannipieri P, Smalla K (eds) Nucleic acids and proteins in soil. Springer, Berlin, Germany, pp 117-139
    • (2006) Nucleic Acids and Proteins in Soil , pp. 117-139
    • Wackernagel, W.1    Nannipieri, P.2    Smalla, K.3
  • 171
    • 33846057772 scopus 로고    scopus 로고
    • Comparison of five commercial kits for the recovery of Francisella tularensis DNA from spiked soil samples
    • CA Whitehouse EH Hannah 2007 Comparison of five commercial kits for the recovery of Francisella tularensis DNA from spiked soil samples Mol Cell Probes 21 92 96
    • (2007) Mol Cell Probes , vol.21 , pp. 92-96
    • Whitehouse, C.A.1    Hannah, E.H.2
  • 172
    • 0030466828 scopus 로고    scopus 로고
    • Sensitive detection of transgenic plant marker gene persistence in soil microcosms
    • F Widmer RJ Seidler LS Watrud 1996 Sensitive detection of transgenic plant marker gene persistence in soil microcosms Mol Ecol 5 603 613
    • (1996) Mol Ecol , vol.5 , pp. 603-613
    • Widmer, F.1    Seidler, R.J.2    Watrud, L.S.3
  • 173
    • 0031046816 scopus 로고    scopus 로고
    • Determination of microbial diversity in environmental samples: Pit falls of PCR-based rRNA analysis
    • F Widmer RJ Seidler KK Donega GL Reed 1997 Determination of microbial diversity in environmental samples: pit falls of PCR-based rRNA analysis Mol Ecol 6 1 7
    • (1997) Mol Ecol , vol.6 , pp. 1-7
    • Widmer, F.1    Seidler, R.J.2    Donega, K.K.3    Reed, G.L.4
  • 176
    • 1242299736 scopus 로고    scopus 로고
    • Isolation of nuclei acids and cultures from ice and permafrost
    • E Willerslev AJ Hansen HN Poinar 2004 Isolation of nuclei acids and cultures from ice and permafrost Trends Ecol Evol 19 141 147
    • (2004) Trends Ecol Evol , vol.19 , pp. 141-147
    • Willerslev, E.1    Hansen, A.J.2    Poinar, H.N.3
  • 177
    • 0028882403 scopus 로고
    • The size and continuity of DNA segments integrated in Bacillus transformation
    • P Zawadzki FM Cohan 1995 The size and continuity of DNA segments integrated in Bacillus transformation Genetics 141 1231 1243
    • (1995) Genetics , vol.141 , pp. 1231-1243
    • Zawadzki, P.1    Cohan, F.M.2


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