메뉴 건너뛰기




Volumn 23, Issue 4, 2014, Pages 788-801

Revisiting comparisons of genetic diversity in stable and declining species: Assessing genome-wide polymorphism in North American bumble bees using RAD sequencing

Author keywords

demographic modelling; heterozygosity; pollinator conservation; population genomics; RAD tags; single nucleotide polymorphisms

Indexed keywords

MICROSATELLITE DNA;

EID: 84893353491     PISSN: 09621083     EISSN: 1365294X     Source Type: Journal    
DOI: 10.1111/mec.12636     Document Type: Article
Times cited : (76)

References (93)
  • 2
    • 0035206919 scopus 로고    scopus 로고
    • When does conservation genetics matter?
    • Amos W, Balmford A, (2001) When does conservation genetics matter? Heredity, 87, 257-265.
    • (2001) Heredity , vol.87 , pp. 257-265
    • Amos, W.1    Balmford, A.2
  • 3
    • 84878449439 scopus 로고    scopus 로고
    • RADseq underestimates diversity and introduces genealogical biases due to nonrandom haplotype sampling
    • Arnold B, Corbett-Detig RB, Hartl D, Bomblies K, (2013) RADseq underestimates diversity and introduces genealogical biases due to nonrandom haplotype sampling. Molecular Ecology, 22, 3179-3190.
    • (2013) Molecular Ecology , vol.22 , pp. 3179-3190
    • Arnold, B.1    Corbett-Detig, R.B.2    Hartl, D.3    Bomblies, K.4
  • 4
    • 54449098752 scopus 로고    scopus 로고
    • Rapid SNP discovery and genetic mapping using sequenced RAD markers
    • Baird NA, Etter PD, Atwood TS, et al,. (2008) Rapid SNP discovery and genetic mapping using sequenced RAD markers. PLoS ONE, 3, e3376.
    • (2008) PLoS ONE , vol.3
    • Baird, N.A.1    Etter, P.D.2    Atwood, T.S.3
  • 5
    • 84872452098 scopus 로고    scopus 로고
    • Molecular evolutionary and population genomic analysis of the nine-spined stickleback using a modified restriction-site-associated DNA tag approach
    • Bruneaux M, Johnston SE, Herczeg G, et al,. (2013) Molecular evolutionary and population genomic analysis of the nine-spined stickleback using a modified restriction-site-associated DNA tag approach. Molecular Ecology, 22, 565-582.
    • (2013) Molecular Ecology , vol.22 , pp. 565-582
    • Bruneaux, M.1    Johnston, S.E.2    Herczeg, G.3
  • 6
    • 84875521114 scopus 로고    scopus 로고
    • Plant-pollinator interactions over 120 years: Loss of species, co-occurrence, and function
    • Burkle LA, Marlin JC, Knight TM, (2013) Plant-pollinator interactions over 120 years: loss of species, co-occurrence, and function. Science, 339, 1611-1615.
    • (2013) Science , vol.339 , pp. 1611-1615
    • Burkle, L.A.1    Marlin, J.C.2    Knight, T.M.3
  • 10
    • 77954291802 scopus 로고    scopus 로고
    • Conservation genetics, foraging distance and nest density of the scarce Great Yellow Bumblebee (Bombus distinguendus)
    • Charman TG, Sears J, Green RE, Bourke AFG, (2010) Conservation genetics, foraging distance and nest density of the scarce Great Yellow Bumblebee (Bombus distinguendus). Molecular Ecology, 19, 2661-2674.
    • (2010) Molecular Ecology , vol.19 , pp. 2661-2674
    • Charman, T.G.1    Sears, J.2    Green, R.E.3    Bourke, A.F.G.4
  • 11
    • 78951476873 scopus 로고    scopus 로고
    • The confounding effects of population structure, genetic diversity and the sampling scheme on the detection and quantification of population size changes
    • Chikhi L, Sousa VC, Luisi P, Goossens B, Beaumont MA, (2010) The confounding effects of population structure, genetic diversity and the sampling scheme on the detection and quantification of population size changes. Genetics, 186, 983-995.
    • (2010) Genetics , vol.186 , pp. 983-995
    • Chikhi, L.1    Sousa, V.C.2    Luisi, P.3    Goossens, B.4    Beaumont, M.A.5
  • 13
    • 45449116504 scopus 로고    scopus 로고
    • Evidence for decline in eastern North American bumblebees (Hymenoptera: Apidae), with special focus on Bombus affinis Cresson
    • Colla SR, Packer L, (2008) Evidence for decline in eastern North American bumblebees (Hymenoptera: Apidae), with special focus on Bombus affinis Cresson. Biodiversity and Conservation, 17, 1379-1391.
    • (2008) Biodiversity and Conservation , vol.17 , pp. 1379-1391
    • Colla, S.R.1    Packer, L.2
  • 14
    • 79960405019 scopus 로고    scopus 로고
    • The variant call format and VCFtools
    • Danecek P, Auton A, Abecasis G, et al,. (2011) The variant call format and VCFtools. Bioinformatics, 27, 2156-2158.
    • (2011) Bioinformatics , vol.27 , pp. 2156-2158
    • Danecek, P.1    Auton, A.2    Abecasis, G.3
  • 16
    • 79959435199 scopus 로고    scopus 로고
    • Genome-wide genetic marker discovery and genotyping using next-generation sequencing
    • Davey J, Hohenlohe P, Etter P, (2011) Genome-wide genetic marker discovery and genotyping using next-generation sequencing. Nature Reviews Genetics, 12, 499-510.
    • (2011) Nature Reviews Genetics , vol.12 , pp. 499-510
    • Davey, J.1    Hohenlohe, P.2    Etter, P.3
  • 17
    • 84878461117 scopus 로고    scopus 로고
    • Special features of RAD sequencing data: Implications for genotyping
    • Davey JW, Cezard T, Fuentes-Utrilla P, et al,. (2013) Special features of RAD sequencing data: implications for genotyping. Molecular Ecology, 22, 3151-3164.
    • (2013) Molecular Ecology , vol.22 , pp. 3151-3164
    • Davey, J.W.1    Cezard, T.2    Fuentes-Utrilla, P.3
  • 18
    • 84876345778 scopus 로고    scopus 로고
    • Characterizing genic and nongenic molecular markers: Comparison of microsatellites and SNPs
    • DeFaveri J, Viitaniemi H, Leder E, Merilä J, (2013) Characterizing genic and nongenic molecular markers: comparison of microsatellites and SNPs. Molecular Ecology Resources, 13, 377-392.
    • (2013) Molecular Ecology Resources , vol.13 , pp. 377-392
    • Defaveri, J.1    Viitaniemi, H.2    Leder, E.3    Merilä, J.4
  • 19
    • 0034079715 scopus 로고    scopus 로고
    • Heterogeneous mutation processes in human microsatellite DNA sequences
    • Ellegren H, (2000) Heterogeneous mutation processes in human microsatellite DNA sequences. Nature Genetics, 24, 400-402.
    • (2000) Nature Genetics , vol.24 , pp. 400-402
    • Ellegren, H.1
  • 20
    • 3042782819 scopus 로고    scopus 로고
    • Microsatellites: Simple sequences with complex evolution
    • Ellegren H, (2004) Microsatellites: simple sequences with complex evolution. Nature Reviews Genetics, 5, 435-445.
    • (2004) Nature Reviews Genetics , vol.5 , pp. 435-445
    • Ellegren, H.1
  • 22
    • 0030087863 scopus 로고    scopus 로고
    • Genetic differentiation of continental and island populations of Bombus terrestris (Hymenoptera: Apidae) in Europe
    • Estoup A, Soignac M, Cornuet J-M, Goudet J, Scholl A, (1996) Genetic differentiation of continental and island populations of Bombus terrestris (Hymenoptera: Apidae) in Europe. Molecular Ecology, 5, 19-31.
    • (1996) Molecular Ecology , vol.5 , pp. 19-31
    • Estoup, A.1    Soignac, M.2    Cornuet, J.-M.3    Goudet, J.4    Scholl, A.5
  • 23
    • 84857207047 scopus 로고    scopus 로고
    • SNP Discovery and genotyping for evolutionary genetics using RAD sequencing
    • (eds Orgogozo V. Rockman M.V.), Humana Press, Totowa, New Jersey.
    • Etter PD, Bassham S, Hohenlohe PA, Johnson EA, Cresko WA, (2011) SNP Discovery and genotyping for evolutionary genetics using RAD sequencing. In: Molecular Methods for Evolutionary Genetics SE-9 (eds, Orgogozo V, Rockman MV,), pp. 157-178. Humana Press, Totowa, New Jersey.
    • (2011) Molecular Methods for Evolutionary Genetics SE - 9 , pp. 157-178
    • Etter, P.D.1    Bassham, S.2    Hohenlohe, P.A.3    Johnson, E.A.4    Cresko, W.A.5
  • 24
    • 48749129895 scopus 로고    scopus 로고
    • Interspecific patterns of genetic diversity in birds: Correlations with extinction risk
    • Evans SR, Sheldon BC, (2008) Interspecific patterns of genetic diversity in birds: correlations with extinction risk. Conservation Biology, 22, 1016-1025.
    • (2008) Conservation Biology , vol.22 , pp. 1016-1025
    • Evans, S.R.1    Sheldon, B.C.2
  • 25
    • 77953032930 scopus 로고    scopus 로고
    • Arlequin suite ver 3.5: A new series of programs to perform population genetics analyses under Linux and Windows
    • Excoffier L, Lischer HEL, (2010) Arlequin suite ver 3.5: a new series of programs to perform population genetics analyses under Linux and Windows. Molecular Ecology Resources, 10, 564-567.
    • (2010) Molecular Ecology Resources , vol.10 , pp. 564-567
    • Excoffier, L.1    Lischer, H.E.L.2
  • 26
    • 0041817568 scopus 로고    scopus 로고
    • Inference of population structure using multilocus genotype data: Linked loci and correlated allele frequencies
    • Falush D, Stephens M, Pritchard JK, (2003) Inference of population structure using multilocus genotype data: linked loci and correlated allele frequencies. Genetics, 164, 1567-1587.
    • (2003) Genetics , vol.164 , pp. 1567-1587
    • Falush, D.1    Stephens, M.2    Pritchard, J.K.3
  • 27
    • 0030436959 scopus 로고    scopus 로고
    • Relationship of genetic variation to population size in wildlife
    • Frankham R, (1996) Relationship of genetic variation to population size in wildlife. Conservation Biology, 10, 1500-1508.
    • (1996) Conservation Biology , vol.10 , pp. 1500-1508
    • Frankham, R.1
  • 28
    • 0031834547 scopus 로고    scopus 로고
    • Inbreeding and extinction: Island populations
    • Frankham R, (1998) Inbreeding and extinction: island populations. Conservation Biology, 12, 665-675.
    • (1998) Conservation Biology , vol.12 , pp. 665-675
    • Frankham, R.1
  • 29
    • 23444437361 scopus 로고    scopus 로고
    • Genetics and extinction
    • Frankham R, (2005) Genetics and extinction. Biological Conservation, 126, 131-140.
    • (2005) Biological Conservation , vol.126 , pp. 131-140
    • Frankham, R.1
  • 30
    • 84878430432 scopus 로고    scopus 로고
    • The effect of RAD allele dropout on the estimation of genetic variation within and between populations
    • Gautier M, Gharbi K, Cezard T, et al,. (2013) The effect of RAD allele dropout on the estimation of genetic variation within and between populations. Molecular Ecology, 22, 3165-3178.
    • (2013) Molecular Ecology , vol.22 , pp. 3165-3178
    • Gautier, M.1    Gharbi, K.2    Cezard, T.3
  • 31
    • 79953184676 scopus 로고    scopus 로고
    • A hierarchical Bayesian model for next-generation population genomics
    • Gompert Z, Buerkle CA, (2011) A hierarchical Bayesian model for next-generation population genomics. Genetics, 187, 903-917.
    • (2011) Genetics , vol.187 , pp. 903-917
    • Gompert, Z.1    Buerkle, C.A.2
  • 34
    • 73449149044 scopus 로고    scopus 로고
    • Inferring the joint demographic history of multiple populations from multidimensional SNP frequency data
    • Gutenkunst RN, Hernandez RD, Williamson SH, Bustamante CD, (2009) Inferring the joint demographic history of multiple populations from multidimensional SNP frequency data. PLoS genetics, 5, e1000695.
    • (2009) PLoS Genetics , vol.5
    • Gutenkunst, R.N.1    Hernandez, R.D.2    Williamson, S.H.3    Bustamante, C.D.4
  • 35
    • 78650304994 scopus 로고    scopus 로고
    • Multi-locus inference of population structure: A comparison between single nucleotide polymorphisms and microsatellites
    • Haasl RJ, Payseur BA, (2011) Multi-locus inference of population structure: a comparison between single nucleotide polymorphisms and microsatellites. Heredity, 106, 158-171.
    • (2011) Heredity , vol.106 , pp. 158-171
    • Haasl, R.J.1    Payseur, B.A.2
  • 36
    • 84878440983 scopus 로고    scopus 로고
    • Population genomics of Pacific lamprey: Adaptive variation in a highly dispersive species
    • Hess JE, Campbell NR, Close DA, Docker MF, Narum SR, (2013) Population genomics of Pacific lamprey: adaptive variation in a highly dispersive species. Molecular ecology, 22, 2898-2916.
    • (2013) Molecular Ecology , vol.22 , pp. 2898-2916
    • Hess, J.E.1    Campbell, N.R.2    Close, D.A.3    Docker, M.F.4    Narum, S.R.5
  • 38
    • 77649219524 scopus 로고    scopus 로고
    • Population genomics of parallel adaptation in threespine stickleback using sequenced RAD tags
    • Hohenlohe PA, Bassham S, Etter PD, et al,. (2010) Population genomics of parallel adaptation in threespine stickleback using sequenced RAD tags. PLoS genetics, 6, e1000862.
    • (2010) PLoS Genetics , vol.6
    • Hohenlohe, P.A.1    Bassham, S.2    Etter, P.D.3
  • 39
    • 79951748696 scopus 로고    scopus 로고
    • Next-generation RAD sequencing identifies thousands of SNPs for assessing hybridization between rainbow and westslope cutthroat trout
    • Hohenlohe PA, Amish SJ, Catchen JM, Allendorf FW, Luikart G, (2011) Next-generation RAD sequencing identifies thousands of SNPs for assessing hybridization between rainbow and westslope cutthroat trout. Molecular Ecology Resources, 11 (Suppl 1), 117-122.
    • (2011) Molecular Ecology Resources , vol.11 , Issue.SUPPL. 1 , pp. 117-122
    • Hohenlohe, P.A.1    Amish, S.J.2    Catchen, J.M.3    Allendorf, F.W.4    Luikart, G.5
  • 40
    • 84878460644 scopus 로고    scopus 로고
    • Genomic patterns of introgression in rainbow and westslope cutthroat trout illuminated by overlapping paired-end RAD sequencing
    • Hohenlohe PA, Day MD, Amish SJ, et al,. (2013) Genomic patterns of introgression in rainbow and westslope cutthroat trout illuminated by overlapping paired-end RAD sequencing. Molecular Ecology, 22, 3002-3013.
    • (2013) Molecular Ecology , vol.22 , pp. 3002-3013
    • Hohenlohe, P.A.1    Day, M.D.2    Amish, S.J.3
  • 41
    • 0042785700 scopus 로고    scopus 로고
    • Non-lethal sampling of DNA from bumble bees for conservation genetics
    • Holehouse KA, Hammond RL, Bourke AFG, (2003) Non-lethal sampling of DNA from bumble bees for conservation genetics. Insectes Sociaux, 50, 277-285.
    • (2003) Insectes Sociaux , vol.50 , pp. 277-285
    • Holehouse, K.A.1    Hammond, R.L.2    Bourke, A.F.G.3
  • 42
    • 33750460281 scopus 로고    scopus 로고
    • Insights into social insects from the genome of the honeybee Apis mellifera
    • Honey Bee Genome Sequencing Consortium.
    • Honey Bee Genome Sequencing Consortium (2006) Insights into social insects from the genome of the honeybee Apis mellifera. Nature, 443, 931-949.
    • (2006) Nature , vol.443 , pp. 931-949
  • 44
    • 38349088696 scopus 로고    scopus 로고
    • Accounting for bias from sequencing error in population genetic estimates
    • Johnson PLF, Slatkin M, (2008) Accounting for bias from sequencing error in population genetic estimates. Molecular Biology and Evolution, 25, 199-206.
    • (2008) Molecular Biology and Evolution , vol.25 , pp. 199-206
    • Johnson, P.L.F.1    Slatkin, M.2
  • 45
    • 51649095312 scopus 로고    scopus 로고
    • ST and its relatives do not measure differentiation
    • ST and its relatives do not measure differentiation. Molecular Ecology, 17, 4015-4026.
    • (2008) Molecular Ecology , vol.17 , pp. 4015-4026
    • Jost, L.1
  • 46
    • 57549087596 scopus 로고    scopus 로고
    • Male flight distance and population substructure in the bumblebee Bombus terrestris
    • Kraus FB, Wolf S, Moritz RFA, (2009) Male flight distance and population substructure in the bumblebee Bombus terrestris. The Journal of Animal Ecology, 78, 247-252.
    • (2009) The Journal of Animal Ecology , vol.78 , pp. 247-252
    • Kraus, F.B.1    Wolf, S.2    Moritz, R.F.A.3
  • 47
    • 57049089876 scopus 로고    scopus 로고
    • Enhanced cross-species utility of conserved microsatellite markers in shorebirds
    • Küpper C, Burke T, Székely T, Dawson DA, (2008) Enhanced cross-species utility of conserved microsatellite markers in shorebirds. BMC Genomics, 9, 502.
    • (2008) BMC Genomics , vol.9 , pp. 502
    • Küpper, C.1    Burke, T.2    Székely, T.3    Dawson, D.A.4
  • 48
    • 74549133545 scopus 로고    scopus 로고
    • Neglect of genetic diversity in implementation of the convention on biological diversity
    • Laikre L, Allendorf FW, Aroner LC, et al,. (2010) Neglect of genetic diversity in implementation of the convention on biological diversity. Conservation Biology, 24, 86-88.
    • (2010) Conservation Biology , vol.24 , pp. 86-88
    • Laikre, L.1    Allendorf, F.W.2    Aroner, L.C.3
  • 49
    • 62349130698 scopus 로고    scopus 로고
    • Ultrafast and memory-efficient alignment of short DNA sequences to the human genome
    • Langmead B, Trapnell C, Pop M, Salzberg SL, (2009) Ultrafast and memory-efficient alignment of short DNA sequences to the human genome. Genome Biology, 10, R25.
    • (2009) Genome Biology , vol.10
    • Langmead, B.1    Trapnell, C.2    Pop, M.3    Salzberg, S.L.4
  • 50
    • 7244221627 scopus 로고    scopus 로고
    • SIMCOAL 2.0: A program to simulate genomic diversity over large recombining regions in a subdivided population with a complex history
    • Laval G, Excoffier L, (2004) SIMCOAL 2.0: a program to simulate genomic diversity over large recombining regions in a subdivided population with a complex history. Bioinformatics, 20, 2485-2487.
    • (2004) Bioinformatics , vol.20 , pp. 2485-2487
    • Laval, G.1    Excoffier, L.2
  • 51
    • 33746774404 scopus 로고    scopus 로고
    • How general are positive relationships between plant population size, fitness and genetic variation?
    • Leimu R, Mutikainen P, Koricheva J, Fischer M, (2006) How general are positive relationships between plant population size, fitness and genetic variation? Journal of Ecology, 94, 942-952.
    • (2006) Journal of Ecology , vol.94 , pp. 942-952
    • Leimu, R.1    Mutikainen, P.2    Koricheva, J.3    Fischer, M.4
  • 52
    • 77749245927 scopus 로고    scopus 로고
    • Estimation of bumblebee queen dispersal distances using sibship reconstruction method
    • Lepais O, Darvill B, O'Connor S, et al,. (2010) Estimation of bumblebee queen dispersal distances using sibship reconstruction method. Molecular Ecology, 19, 819-831.
    • (2010) Molecular Ecology , vol.19 , pp. 819-831
    • Lepais, O.1    Darvill, B.2    O'Connor, S.3
  • 53
    • 84878020383 scopus 로고    scopus 로고
    • 'Next generation' biogeography: Towards understanding the drivers of species diversification and persistence
    • Lexer C, Mangili S, Bossolini E, et al,. (2013) 'Next generation' biogeography: towards understanding the drivers of species diversification and persistence. Journal of Biogeography, 40, 1013-1022.
    • (2013) Journal of Biogeography , vol.40 , pp. 1013-1022
    • Lexer, C.1    Mangili, S.2    Bossolini, E.3
  • 54
    • 67649884743 scopus 로고    scopus 로고
    • Fast and accurate short read alignment with Burrows-Wheeler transform
    • Li H, Durbin R, (2009) Fast and accurate short read alignment with Burrows-Wheeler transform. Bioinformatics, 25, 1754-1760.
    • (2009) Bioinformatics , vol.25 , pp. 1754-1760
    • Li, H.1    Durbin, R.2
  • 55
    • 68549104404 scopus 로고    scopus 로고
    • The Sequence Alignment/Map format and SAMtools
    • Li H, Handsaker B, Wysoker A, et al,. (2009) The Sequence Alignment/Map format and SAMtools. Bioinformatics, 25, 2078-2079.
    • (2009) Bioinformatics , vol.25 , pp. 2078-2079
    • Li, H.1    Handsaker, B.2    Wysoker, A.3
  • 56
    • 84874963219 scopus 로고    scopus 로고
    • Adaptive evolution of multiple traits through multiple mutations at a single gene
    • Linnen CR, Poh Y-P, Peterson BK, et al,. (2013) Adaptive evolution of multiple traits through multiple mutations at a single gene. Science, 339, 1312-1316.
    • (2013) Science , vol.339 , pp. 1312-1316
    • Linnen, C.R.1    Poh, Y.-P.2    Peterson, B.K.3
  • 57
    • 65549163771 scopus 로고    scopus 로고
    • Comparative genetic analyses of historical and contemporary collections highlight contrasting demographic histories for the bumble bees Bombus pensylvanicus and B. Impatiens in Illinois
    • Lozier JD, Cameron SA, (2009) Comparative genetic analyses of historical and contemporary collections highlight contrasting demographic histories for the bumble bees Bombus pensylvanicus and B. impatiens in Illinois. Molecular Ecology, 18, 1875-1886.
    • (2009) Molecular Ecology , vol.18 , pp. 1875-1886
    • Lozier, J.D.1    Cameron, S.A.2
  • 58
    • 81855218599 scopus 로고    scopus 로고
    • Patterns of range-wide genetic variation in six North American bumble bee (Apidae: Bombus) species
    • Lozier JD, Strange JP, Stewart IJ, Cameron SA, (2011) Patterns of range-wide genetic variation in six North American bumble bee (Apidae: Bombus) species. Molecular Ecology, 20, 4870-4888.
    • (2011) Molecular Ecology , vol.20 , pp. 4870-4888
    • Lozier, J.D.1    Strange, J.P.2    Stewart, I.J.3    Cameron, S.A.4
  • 60
    • 58949096374 scopus 로고    scopus 로고
    • Assessing statistical power of SNPs for population structure and conservation studies
    • Morin PA, Martien KK, Taylor BL, (2009) Assessing statistical power of SNPs for population structure and conservation studies. Molecular Ecology Resources, 9, 66-73.
    • (2009) Molecular Ecology Resources , vol.9 , pp. 66-73
    • Morin, P.A.1    Martien, K.K.2    Taylor, B.L.3
  • 61
    • 78651276632 scopus 로고    scopus 로고
    • Hymenoptera Genome Database: Integrated community resources for insect species of the order Hymenoptera
    • Munoz-Torres MC, Reese JT, Childers CP, et al,. (2011) Hymenoptera Genome Database: integrated community resources for insect species of the order Hymenoptera. Nucleic Acids Research, 39, D658-D662.
    • (2011) Nucleic Acids Research , vol.39
    • Munoz-Torres, M.C.1    Reese, J.T.2    Childers, C.P.3
  • 63
    • 29444452921 scopus 로고    scopus 로고
    • Molecular signatures of natural selection
    • Nielsen R, (2005) Molecular signatures of natural selection. Annual Review of Genetics, 39, 197-218.
    • (2005) Annual Review of Genetics , vol.39 , pp. 197-218
    • Nielsen, R.1
  • 64
    • 84864273210 scopus 로고    scopus 로고
    • SNP calling, genotype calling, and sample allele frequency estimation from new-generation sequencing data
    • Nielsen R, Korneliussen T, Albrechtsen A, Li Y, Wang J, (2012) SNP calling, genotype calling, and sample allele frequency estimation from new-generation sequencing data. PLoS ONE, 7, e37558.
    • (2012) PLoS ONE , vol.7
    • Nielsen, R.1    Korneliussen, T.2    Albrechtsen, A.3    Li, Y.4    Wang, J.5
  • 66
    • 84862009871 scopus 로고    scopus 로고
    • Genome-wide association genetics of an adaptive trait in lodgepole pine
    • Parchman TL, Gompert Z, Mudge J, et al,. (2012) Genome-wide association genetics of an adaptive trait in lodgepole pine. Molecular Ecology, 21, 2991-3005.
    • (2012) Molecular Ecology , vol.21 , pp. 2991-3005
    • Parchman, T.L.1    Gompert, Z.2    Mudge, J.3
  • 67
    • 33746361176 scopus 로고    scopus 로고
    • Integrating patterns of polymorphism at SNPs and STRs
    • Payseur BA, Cutter AD, (2006) Integrating patterns of polymorphism at SNPs and STRs. Trends in Genetics, 22, 424-429.
    • (2006) Trends in Genetics , vol.22 , pp. 424-429
    • Payseur, B.A.1    Cutter, A.D.2
  • 69
    • 84861691274 scopus 로고    scopus 로고
    • Double digest RADseq: An inexpensive method for de novo SNP discovery and genotyping in model and non-model species
    • Peterson BK, Weber JN, Kay EH, Fisher HS, Hoekstra HE, (2012) Double digest RADseq: an inexpensive method for de novo SNP discovery and genotyping in model and non-model species. PLoS ONE, 7, e37135.
    • (2012) PLoS ONE , vol.7
    • Peterson, B.K.1    Weber, J.N.2    Kay, E.H.3    Fisher, H.S.4    Hoekstra, H.E.5
  • 70
    • 14844331058 scopus 로고    scopus 로고
    • Standardizing for microsatellite length in comparisons of genetic diversity
    • Petit RJ, Deguilloux M-F, Chat J, et al,. (2005) Standardizing for microsatellite length in comparisons of genetic diversity. Molecular Ecology, 14, 885-890.
    • (2005) Molecular Ecology , vol.14 , pp. 885-890
    • Petit, R.J.1    Deguilloux, M.-F.2    Chat, J.3
  • 71
    • 84863304598 scopus 로고    scopus 로고
    • R Core Team. R Foundation for Statistical Computing, Vienna, Austria.
    • R Core Team (2012) R: A Language and Environment for Statistical Computing. R Foundation for Statistical Computing, Vienna, Austria.
    • (2012) R: A Language and Environment for Statistical Computing
  • 74
    • 77949437244 scopus 로고    scopus 로고
    • Analysis of a normalised expressed sequence tag (EST) library from a key pollinator, the bumblebee Bombus terrestris
    • Sadd BM, Kube M, Klages S, Reinhardt R, Schmid-Hempel P, (2010) Analysis of a normalised expressed sequence tag (EST) library from a key pollinator, the bumblebee Bombus terrestris. BMC Genomics, 11, 110.
    • (2010) BMC Genomics , vol.11 , pp. 110
    • Sadd, B.M.1    Kube, M.2    Klages, S.3    Reinhardt, R.4    Schmid-Hempel, P.5
  • 75
    • 77949778188 scopus 로고    scopus 로고
    • On the use of large marker panels to estimate inbreeding and relatedness: Empirical and simulation studies of a pedigreed zebra finch population typed at 771 SNPs
    • Santure AW, Stapley J, Ball AD, et al,. (2010) On the use of large marker panels to estimate inbreeding and relatedness: empirical and simulation studies of a pedigreed zebra finch population typed at 771 SNPs. Molecular Ecology, 19, 1439-1451.
    • (2010) Molecular Ecology , vol.19 , pp. 1439-1451
    • Santure, A.W.1    Stapley, J.2    Ball, A.D.3
  • 76
    • 0347358913 scopus 로고    scopus 로고
    • The evolution of molecular markers-just a matter of fashion?
    • Schlötterer C, (2004) The evolution of molecular markers-just a matter of fashion? Nature Reviews Genetics, 5, 63-69.
    • (2004) Nature Reviews Genetics , vol.5 , pp. 63-69
    • Schlötterer, C.1
  • 77
    • 84860565554 scopus 로고    scopus 로고
    • Serial founder effects during range expansion: A spatial analog of genetic drift
    • Slatkin M, Excoffier L, (2012) Serial founder effects during range expansion: a spatial analog of genetic drift. Genetics, 191, 171-181.
    • (2012) Genetics , vol.191 , pp. 171-181
    • Slatkin, M.1    Excoffier, L.2
  • 78
    • 77949866651 scopus 로고    scopus 로고
    • How many SNPs are enough?
    • Smouse PE, (2010) How many SNPs are enough? Molecular Ecology, 19, 1265-1266.
    • (2010) Molecular Ecology , vol.19 , pp. 1265-1266
    • Smouse, P.E.1
  • 79
    • 67849119548 scopus 로고    scopus 로고
    • The impact of sampling schemes on the site frequency spectrum in nonequilibrium subdivided populations
    • Städler T, Haubold B, Merino C, Stephan W, Pfaffelhuber P, (2009) The impact of sampling schemes on the site frequency spectrum in nonequilibrium subdivided populations. Genetics, 182, 205-216.
    • (2009) Genetics , vol.182 , pp. 205-216
    • Städler, T.1    Haubold, B.2    Merino, C.3    Stephan, W.4    Pfaffelhuber, P.5
  • 80
    • 68949129003 scopus 로고    scopus 로고
    • Novel microsatellite DNA loci for Bombus terrestris (Linnaeus, 1758)
    • Stolle E, Rohde M, Vautrin D, et al,. (2009) Novel microsatellite DNA loci for Bombus terrestris (Linnaeus, 1758). Molecular Ecology, 9, 1345-1352.
    • (2009) Molecular Ecology , vol.9 , pp. 1345-1352
    • Stolle, E.1    Rohde, M.2    Vautrin, D.3
  • 81
    • 78651484927 scopus 로고    scopus 로고
    • A second generation genetic map of the bumblebee Bombus terrestris (Linnaeus, 1758) reveals slow genome and chromosome evolution in the Apidae
    • Stolle E, Wilfert L, Schmid-Hempel R, et al,. (2011) A second generation genetic map of the bumblebee Bombus terrestris (Linnaeus, 1758) reveals slow genome and chromosome evolution in the Apidae. BMC Genomics, 12, 48.
    • (2011) BMC Genomics , vol.12 , pp. 48
    • Stolle, E.1    Wilfert, L.2    Schmid-Hempel, R.3
  • 82
    • 0034192091 scopus 로고    scopus 로고
    • Efficient genetic markers for population biology
    • Sunnucks P, (2000) Efficient genetic markers for population biology. Trends in Ecology and Evolution, 15, 199-203.
    • (2000) Trends in Ecology and Evolution , vol.15 , pp. 199-203
    • Sunnucks, P.1
  • 83
    • 0024313579 scopus 로고
    • Statistical method for testing the neutral mutation hypothesis by DNA polymorphism
    • Tajima F, (1989) Statistical method for testing the neutral mutation hypothesis by DNA polymorphism. Genetics, 123, 585-595.
    • (1989) Genetics , vol.123 , pp. 585-595
    • Tajima, F.1
  • 84
    • 50049109703 scopus 로고    scopus 로고
    • To what extent do microsatellite markers reflect genome-wide genetic diversity in natural populations?
    • Väli U, Einarsson A, Waits L, Ellegren H, (2008) To what extent do microsatellite markers reflect genome-wide genetic diversity in natural populations? Molecular Ecology, 17, 3808-3817.
    • (2008) Molecular Ecology , vol.17 , pp. 3808-3817
    • Väli, U.1    Einarsson, A.2    Waits, L.3    Ellegren, H.4
  • 89
    • 0001392829 scopus 로고
    • The distribution and decline of British Bumble bees (Bombus Latr.)
    • Williams PH, (1982) The distribution and decline of British Bumble bees (Bombus Latr.). Journal of Apicultural Research, 21, 236-245.
    • (1982) Journal of Apicultural Research , vol.21 , pp. 236-245
    • Williams, P.H.1
  • 90
    • 67650370615 scopus 로고    scopus 로고
    • Bumblebee vulnerability and conservation world-wide
    • Williams PH, Osborne JL, (2009) Bumblebee vulnerability and conservation world-wide. Apidologie, 40, 367-387.
    • (2009) Apidologie , vol.40 , pp. 367-387
    • Williams, P.H.1    Osborne, J.L.2
  • 91
    • 67650441716 scopus 로고    scopus 로고
    • Bumblebee vulnerability: Common correlates of winners and losers across three continents
    • Williams PH, Colla SR, Xie Z, (2009) Bumblebee vulnerability: common correlates of winners and losers across three continents. Conservation Biology, 23, 931-940.
    • (2009) Conservation Biology , vol.23 , pp. 931-940
    • Williams, P.H.1    Colla, S.R.2    Xie, Z.3
  • 93
    • 68349121369 scopus 로고    scopus 로고
    • Bee genetics and conservation
    • Zayed A, (2009) Bee genetics and conservation. Apidologie, 40, 237-262.
    • (2009) Apidologie , vol.40 , pp. 237-262
    • Zayed, A.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.