-
1
-
-
0037323729
-
The effect of single nucleotide polymorphism identification strategies on estimates of linkage disequilibrium
-
Akey, J.M., Zhang, K., Xiong, M., and Jin, L. 2003. The effect of single nucleotide polymorphism identification strategies on estimates of linkage disequilibrium. Mol. Biol. Evol. 20: 232-242.
-
(2003)
Mol. Biol. Evol.
, vol.20
, pp. 232-242
-
-
Akey, J.M.1
Zhang, K.2
Xiong, M.3
Jin, L.4
-
2
-
-
27144539145
-
Natural selection on protein coding genes in the human genome
-
in press
-
Bustamante, C.D., Fledel-Alon, A., Williamson, S., Nielsen, R., Hubisz, M.T., Glanowski, S., Tanenbaum, D.M., White, T.J., Sninsky, J.J., Hernandez, R., et al. 2005. Natural selection on protein coding genes in the human genome. Nature (in press).
-
(2005)
Nature
-
-
Bustamante, C.D.1
Fledel-Alon, A.2
Williamson, S.3
Nielsen, R.4
Hubisz, M.T.5
Glanowski, S.6
Tanenbaum, D.M.7
White, T.J.8
Sninsky, J.J.9
Hernandez, R.10
-
3
-
-
1842435261
-
Haplotype diversity across 100 candidate genes for inflammation, lipid metabolism, and blood pressure regulation in two populations
-
Crawford, D.C., Carlson, C.S., Rieder, M.J., Carrington, D.P., Yi, Q., Smith, J.D., Eberle, M.A., Kruglyak, L., and Nickerson, D.A. 2004. Haplotype diversity across 100 candidate genes for inflammation, lipid metabolism, and blood pressure regulation in two populations. Am. J. Hum. Genet. 74: 610-622.
-
(2004)
Am. J. Hum. Genet.
, vol.74
, pp. 610-622
-
-
Crawford, D.C.1
Carlson, C.S.2
Rieder, M.J.3
Carrington, D.P.4
Yi, Q.5
Smith, J.D.6
Eberle, M.A.7
Kruglyak, L.8
Nickerson, D.A.9
-
4
-
-
0033911640
-
Hitchhiking under positive Darwinian selection
-
Fay, J.C. and Wu, C.I. 2000. Hitchhiking under positive Darwinian selection. Genetics 155: 1405-1413.
-
(2000)
Genetics
, vol.155
, pp. 1405-1413
-
-
Fay, J.C.1
Wu, C.I.2
-
5
-
-
79959503826
-
The International HapMap Project
-
Gibbs, R.A., Belmont, J.W., Hardenbol, P., Willis, T.D., Yu, F., Yang, H., Chang, L.-Y., Huang, W., Liu, B., Shen, Y., et al. 2003. The International HapMap Project. Nature 426: 789-796.
-
(2003)
Nature
, vol.426
, pp. 789-796
-
-
Gibbs, R.A.1
Belmont, J.W.2
Hardenbol, P.3
Willis, T.D.4
Yu, F.5
Yang, H.6
Chang, L.-Y.7
Huang, W.8
Liu, B.9
Shen, Y.10
-
6
-
-
13844313862
-
Whole-genome patterns of common DNA variation in three human populations
-
Hinds, D.A., Stuve, L.L., Nilsen, G.B., Halperin, E., Eskin, E., Ballinger, D.G., Frazer, K.A., and Cox, D.R. 2005. Whole-genome patterns of common DNA variation in three human populations. Science 307: 1072-1079.
-
(2005)
Science
, vol.307
, pp. 1072-1079
-
-
Hinds, D.A.1
Stuve, L.L.2
Nilsen, G.B.3
Halperin, E.4
Eskin, E.5
Ballinger, D.G.6
Frazer, K.A.7
Cox, D.R.8
-
7
-
-
0023339852
-
A test of neutral molecular evolution based on nucleotide data
-
Hudson, R.R., Kreitman, M., and Aguadé, M. 1987. A test of neutral molecular evolution based on nucleotide data. Genetics 116: 153-159.
-
(1987)
Genetics
, vol.116
, pp. 153-159
-
-
Hudson, R.R.1
Kreitman, M.2
Aguadé, M.3
-
8
-
-
0033039497
-
Prospects for whole-genome linkage disequilibrium mapping of common disease genes
-
Kruglyak, L. 1999. Prospects for whole-genome linkage disequilibrium mapping of common disease genes. Nat. Genet. 22: 139-144.
-
(1999)
Nat. Genet.
, vol.22
, pp. 139-144
-
-
Kruglyak, L.1
-
9
-
-
0033832928
-
Usefulness of single nucleotide polymorphism data for estimating population parameters
-
Kuhner, M.K., Beerli, P., Yamamoto, J., and Felsenstein, J. 2000. Usefulness of single nucleotide polymorphism data for estimating population parameters. Genetics 156: 439-447.
-
(2000)
Genetics
, vol.156
, pp. 439-447
-
-
Kuhner, M.K.1
Beerli, P.2
Yamamoto, J.3
Felsenstein, J.4
-
10
-
-
6344267228
-
Pattern of sequence variation across 213 environmental response genes
-
Livingston, R.J., Von Niederhausern, A., Jegga, A.G., Crawford, D.C., Carlson, C.S., Rieder, M.J., Gowrisankar, S., Aronow, B.J., Weiss, R.B., and Nickerson, D.A. 2004. Pattern of sequence variation across 213 environmental response genes, Genome Res. 14: 1821-1831.
-
(2004)
Genome Res.
, vol.14
, pp. 1821-1831
-
-
Livingston, R.J.1
Von Niederhausern, A.2
Jegga, A.G.3
Crawford, D.C.4
Carlson, C.S.5
Rieder, M.J.6
Gowrisankar, S.7
Aronow, B.J.8
Weiss, R.B.9
Nickerson, D.A.10
-
11
-
-
3442885665
-
Population genetic analysis of ascertained SNP data
-
Nielsen, R. 2004. Population genetic analysis of ascertained SNP data. Hum. Genomics 1: 218-224.
-
(2004)
Hum. Genomics
, vol.1
, pp. 218-224
-
-
Nielsen, R.1
-
12
-
-
0042991419
-
Correcting for ascertainment biases when analyzing SNP data: Applications to the estimation of linkage disequilibrium
-
Nielsen, R. and Signorovitch, J. 2003. Correcting for ascertainment biases when analyzing SNP data: Applications to the estimation of linkage disequilibrium. Theor. Pop. Biol. 63: 245-255.
-
(2003)
Theor. Pop. Biol.
, vol.63
, pp. 245-255
-
-
Nielsen, R.1
Signorovitch, J.2
-
13
-
-
11244313872
-
Reconstituting the frequency spectrum of ascertained single-nucleotide polymorphism data
-
Nielsen, R., Hubisz, M.J., and Clark, A.G. 2004. Reconstituting the frequency spectrum of ascertained single-nucleotide polymorphism data. Genetics 168: 2373-2382.
-
(2004)
Genetics
, vol.168
, pp. 2373-2382
-
-
Nielsen, R.1
Hubisz, M.J.2
Clark, A.G.3
-
14
-
-
22744434580
-
The pattern of polymorphism in Arabidopsis thaliana
-
Nordborg, M., Hu, T.T., Ishino, Y., Jhaveri, J., Toomajian, C., Zheng, H., Bakker, E., Calabrese, P., Gladstone, J., Goyal, R., et al. 2005. The pattern of polymorphism in Arabidopsis thaliana. PLoS. Biol. 3: e196.
-
(2005)
PLoS. Biol.
, vol.3
-
-
Nordborg, M.1
Hu, T.T.2
Ishino, Y.3
Jhaveri, J.4
Toomajian, C.5
Zheng, H.6
Bakker, E.7
Calabrese, P.8
Gladstone, J.9
Goyal, R.10
-
15
-
-
0034969437
-
Are rare variants responsible for susceptibility to complex diseases?
-
Pritchard, J.K. 2001. Are rare variants responsible for susceptibility to complex diseases? Am. J. Hum. Genet. 69: 124-137.
-
(2001)
Am. J. Hum. Genet.
, vol.69
, pp. 124-137
-
-
Pritchard, J.K.1
-
16
-
-
0033358548
-
Use of unlinked genetic markers to detect population stratification in association studies
-
Pritchard, J.K. and Rosenberg, N.A. 2002. Use of unlinked genetic markers to detect population stratification in association studies. Am. J. Hum. Genet. 65: 220-228.
-
(2002)
Am. J. Hum. Genet.
, vol.65
, pp. 220-228
-
-
Pritchard, J.K.1
Rosenberg, N.A.2
-
17
-
-
0036843031
-
Evidence for population growth in humans is confounded by fine-scale population structure
-
Ptak, S.E. and Przeworski, M. 2002. Evidence for population growth in humans is confounded by fine-scale population structure. Trends Genet. 18: 559-563.
-
(2002)
Trends Genet.
, vol.18
, pp. 559-563
-
-
Ptak, S.E.1
Przeworski, M.2
-
18
-
-
0035919656
-
Haplotype variation and linkage disequilibrium in 313 human genes
-
Stephens, J.C., Schneider, J.A., Tanguay, D.A., Choi, J., Acharya, T., Stanley, S.E., Jiang, R., Messer, C.J., Chew, A., Han, J.H., et al. 2001. Haplotype variation and linkage disequilibrium in 313 human genes. Science 293: 489-493.
-
(2001)
Science
, vol.293
, pp. 489-493
-
-
Stephens, J.C.1
Schneider, J.A.2
Tanguay, D.A.3
Choi, J.4
Acharya, T.5
Stanley, S.E.6
Jiang, R.7
Messer, C.J.8
Chew, A.9
Han, J.H.10
-
19
-
-
0031014291
-
Inferring coalescence times from DNA sequence data
-
Tavaré, S., Balding, D.J., Griffiths, R.C., and Donnelly, P. 1997. Inferring coalescence times from DNA sequence data. Genetics 145: 505-518.
-
(1997)
Genetics
, vol.145
, pp. 505-518
-
-
Tavaré, S.1
Balding, D.J.2
Griffiths, R.C.3
Donnelly, P.4
-
20
-
-
0035205317
-
The discovery of single-nucleotide polymorphisms-and inferences about human demographic history
-
Wakeley, J., Nielsen, R., Liu-Cordero, S.N., and Ardlie, K. 2001. The discovery of single-nucleotide polymorphisms-and inferences about human demographic history. Am. J. Hum. Genet. 69: 1332-1347.
-
(2001)
Am. J. Hum. Genet.
, vol.69
, pp. 1332-1347
-
-
Wakeley, J.1
Nielsen, R.2
Liu-Cordero, S.N.3
Ardlie, K.4
-
22
-
-
20344380699
-
Simultaneous inference of selection and population growth from patterns of variation in the human genome
-
Williamson, S.H., Hernandez, R., Fledel-Alon, A., Zhu, L., Nielsen, R., and Bustamante, C.D. 2005. Simultaneous inference of selection and population growth from patterns of variation in the human genome. Proc. Natl. Acad. Sci. 102: 7882-7887.
-
(2005)
Proc. Natl. Acad. Sci.
, vol.102
, pp. 7882-7887
-
-
Williamson, S.H.1
Hernandez, R.2
Fledel-Alon, A.3
Zhu, L.4
Nielsen, R.5
Bustamante, C.D.6
-
23
-
-
27544498123
-
-
NIEHS resequencing study
-
http://egp.gs.washington.edu; NIEHS resequencing study.
-
-
-
-
24
-
-
27544488466
-
-
International HapMap Project
-
http://www.hapmap.org; International HapMap Project.
-
-
-
-
25
-
-
27544507882
-
-
Perlegen Sciences Web site
-
http://genome.perlegen.com/browser/download.html; Perlegen Sciences Web site.
-
-
-
-
26
-
-
27544503728
-
-
HapMap .subjects
-
http://www.hapmap.org/downloads/encode1.html; HapMap .subjects
-
-
-
|