-
1
-
-
0025183708
-
Basic local alignment search tool
-
Altschul S.F., Gish W., Miller W., Myers E.W., Lipman D.J. Basic local alignment search tool. J. Mol. Biol. 1990, 215:403-410.
-
(1990)
J. Mol. Biol.
, vol.215
, pp. 403-410
-
-
Altschul, S.F.1
Gish, W.2
Miller, W.3
Myers, E.W.4
Lipman, D.J.5
-
2
-
-
80054814749
-
Distant Mimivirus relative with a larger genome highlights the fundamental features of Megaviridae
-
Arslan D., Legendre M., Seltzer V., Abergel C., Claverie J.M. Distant Mimivirus relative with a larger genome highlights the fundamental features of Megaviridae. Proc. Nat. Acad. Sci. U.S.A. 2011, 108:17486-17491.
-
(2011)
Proc. Nat. Acad. Sci. U.S.A.
, vol.108
, pp. 17486-17491
-
-
Arslan, D.1
Legendre, M.2
Seltzer, V.3
Abergel, C.4
Claverie, J.M.5
-
3
-
-
0028174894
-
Trojan horses of the microbial world: protozoa and the survival of bacterial pathogens in the environment
-
Barker J., Brown M.R. Trojan horses of the microbial world: protozoa and the survival of bacterial pathogens in the environment. Microbiology 1994, 140(Pt 6):1253-1259.
-
(1994)
Microbiology
, vol.140
, Issue.PART 6
, pp. 1253-1259
-
-
Barker, J.1
Brown, M.R.2
-
4
-
-
84879996480
-
Lateral gene exchanges shape the genomes of amoeba-resisting microorganisms
-
Bertelli C., Greub G. Lateral gene exchanges shape the genomes of amoeba-resisting microorganisms. Front Cell Infect. Microbiol 2012, 2:110.
-
(2012)
Front Cell Infect. Microbiol
, vol.2
, pp. 110
-
-
Bertelli, C.1
Greub, G.2
-
5
-
-
23144452801
-
GeneMark: web software for gene finding in prokaryotes, eukaryotes and viruses
-
Besemer J., Borodovsky M. GeneMark: web software for gene finding in prokaryotes, eukaryotes and viruses. Nucleic Acids Res. 2005, 33:W451-W454.
-
(2005)
Nucleic Acids Res.
, vol.33
-
-
Besemer, J.1
Borodovsky, M.2
-
6
-
-
84880042318
-
High-throughput isolation of giant viruses of the Mimiviridae and Marseilleviridae families in the Tunisian environment
-
Boughalmi M., Saadi H., Pagnier I., Colson P., Fournous G., Raoult D., La Scola B. High-throughput isolation of giant viruses of the Mimiviridae and Marseilleviridae families in the Tunisian environment. Environ. Microbiol. 2013, 15:2000-2007.
-
(2013)
Environ. Microbiol.
, vol.15
, pp. 2000-2007
-
-
Boughalmi, M.1
Saadi, H.2
Pagnier, I.3
Colson, P.4
Fournous, G.5
Raoult, D.6
La Scola, B.7
-
7
-
-
77953725121
-
Classification and determination of possible origins of ORFans through analysis of nucleocytoplasmic large DNA viruses
-
Boyer M., Gimenez G., Suzan-Monti M., Raoult D. Classification and determination of possible origins of ORFans through analysis of nucleocytoplasmic large DNA viruses. Intervirology 2010, 53:310-320.
-
(2010)
Intervirology
, vol.53
, pp. 310-320
-
-
Boyer, M.1
Gimenez, G.2
Suzan-Monti, M.3
Raoult, D.4
-
8
-
-
74549151848
-
Giant Marseillevirus highlights the role of amoebae as a melting pot in emergence of chimeric microorganisms
-
Boyer M., Yutin N., Pagnier I., Barrassi L., Fournous G., Espinosa L., Robert C., Azza S., Sun S., Rossmann M.G., Suzan-Monti M., La Scola B., Koonin E.V., Raoult D. Giant Marseillevirus highlights the role of amoebae as a melting pot in emergence of chimeric microorganisms. Proc. Nat. Acad. Sci. U.S.A 2009, 106:21848-21853.
-
(2009)
Proc. Nat. Acad. Sci. U.S.A
, vol.106
, pp. 21848-21853
-
-
Boyer, M.1
Yutin, N.2
Pagnier, I.3
Barrassi, L.4
Fournous, G.5
Espinosa, L.6
Robert, C.7
Azza, S.8
Sun, S.9
Rossmann, M.G.10
Suzan-Monti, M.11
La Scola, B.12
Koonin, E.V.13
Raoult, D.14
-
9
-
-
67650757433
-
TrimAl: a tool for automated alignment trimming in large-scale phylogenetic analyses
-
Capella-Gutierrez S., Silla-Martinez J.M., Gabaldon T. trimAl: a tool for automated alignment trimming in large-scale phylogenetic analyses. Bioinformatics 2009, 25:1972-1973.
-
(2009)
Bioinformatics
, vol.25
, pp. 1972-1973
-
-
Capella-Gutierrez, S.1
Silla-Martinez, J.M.2
Gabaldon, T.3
-
10
-
-
79959907143
-
Ameba-associated Keratitis, France
-
Cohen G., Hoffart L., La Scola B., Raoult D., Drancourt M. Ameba-associated Keratitis, France. Emerg. Infect. Dis. 2011, 17:1306-1308.
-
(2011)
Emerg. Infect. Dis.
, vol.17
, pp. 1306-1308
-
-
Cohen, G.1
Hoffart, L.2
La Scola, B.3
Raoult, D.4
Drancourt, M.5
-
11
-
-
84861459625
-
Reclassification of giant viruses composing a fourth domain of life in the new order Megavirales
-
Colson P., de Lamballerie X., Fournous G., Raoult D. Reclassification of giant viruses composing a fourth domain of life in the new order Megavirales. Intervirology 2012, 55:321-332.
-
(2012)
Intervirology
, vol.55
, pp. 321-332
-
-
Colson, P.1
de Lamballerie, X.2
Fournous, G.3
Raoult, D.4
-
12
-
-
84888016591
-
"Megavirales", a proposed new order for eukaryotic nucleocytoplasmic large DNA viruses
-
Colson P., de Lamballerie X., Yutin N., Asgari S., Bigot Y., Bideshi D.K., Cheng X.W., Federici B.A., Van Etten J.L., Koonin E.V., La Scola B., Raoult D. "Megavirales", a proposed new order for eukaryotic nucleocytoplasmic large DNA viruses. Arch. Virol. 2013, 158:2517-2521.
-
(2013)
Arch. Virol.
, vol.158
, pp. 2517-2521
-
-
Colson, P.1
de Lamballerie, X.2
Yutin, N.3
Asgari, S.4
Bigot, Y.5
Bideshi, D.K.6
Cheng, X.W.7
Federici, B.A.8
Van Etten, J.L.9
Koonin, E.V.10
La Scola, B.11
Raoult, D.12
-
13
-
-
84888824200
-
Evidence of the megavirome in humans
-
Colson P., Fancello L., Gimenez G., Armougom F., Desnues C., Fournous G., Yoosuf N., Million M., La Scola B., Raoult D. Evidence of the megavirome in humans. J. Clin. Virol. 2013, 57:191-200.
-
(2013)
J. Clin. Virol.
, vol.57
, pp. 191-200
-
-
Colson, P.1
Fancello, L.2
Gimenez, G.3
Armougom, F.4
Desnues, C.5
Fournous, G.6
Yoosuf, N.7
Million, M.8
La Scola, B.9
Raoult, D.10
-
14
-
-
84876029838
-
"Marseilleviridae", a new family of giant viruses infecting amoebae
-
Colson P., Pagnier I., Yoosuf N., Fournous G., La Scola B., Raoult D. "Marseilleviridae", a new family of giant viruses infecting amoebae. Arch. Virol. 2013, 158:915-920.
-
(2013)
Arch. Virol.
, vol.158
, pp. 915-920
-
-
Colson, P.1
Pagnier, I.2
Yoosuf, N.3
Fournous, G.4
La Scola, B.5
Raoult, D.6
-
15
-
-
84893192678
-
Evidence of the Presence of Mimiviruses, Their Virophages, and Marseilleviruses in Environmental and Clinical Samples Worldwide
-
Google Maps Content, URMITE Laboratory. 2013. URL:
-
Colson, P., Raoult, D., Pagnier, I., La Scola, B. Evidence of the Presence of Mimiviruses, Their Virophages, and Marseilleviruses in Environmental and Clinical Samples Worldwide. Google Maps Content, URMITE Laboratory. 2013. URL:. http://maps.google.com/maps/ms?ie=UTF&msa=0&msid=200914559094835369589.0004beba4af112f60dcf2.
-
-
-
Colson, P.1
Raoult, D.2
Pagnier, I.3
La Scola, B.4
-
16
-
-
80054809678
-
Viruses with more than 1000 genes: Mamavirus, a new Acanthamoeba castellanii mimivirus strain, and reannotation of mimivirus genes
-
Colson P., Yutin N., Shabalina S.A., Robert C., Fournous G., La Scola B., Raoult D., Koonin E.V. Viruses with more than 1000 genes: Mamavirus, a new Acanthamoeba castellanii mimivirus strain, and reannotation of mimivirus genes. Genome Biol. Evol 2011, 3:737-742.
-
(2011)
Genome Biol. Evol
, vol.3
, pp. 737-742
-
-
Colson, P.1
Yutin, N.2
Shabalina, S.A.3
Robert, C.4
Fournous, G.5
La Scola, B.6
Raoult, D.7
Koonin, E.V.8
-
17
-
-
3543051830
-
Mauve: multiple alignment of conserved genomic sequence with rearrangements
-
Darling A.C., Mau B., Blattner F.R., Perna N.T. Mauve: multiple alignment of conserved genomic sequence with rearrangements. Genome Res. 2004, 14:1394-1403.
-
(2004)
Genome Res.
, vol.14
, pp. 1394-1403
-
-
Darling, A.C.1
Mau, B.2
Blattner, F.R.3
Perna, N.T.4
-
18
-
-
43349091544
-
Using MUMmer to identify similar regions in large sequence sets
-
(Unit), (Chapter 10:Unit 10.3)
-
Delcher A.L., Salzberg S.L., Phillippy A.M. Using MUMmer to identify similar regions in large sequence sets. Curr. Protoc. Bioinf. 2003, (Unit), (Chapter 10:Unit 10.3). 10.1002/0471250953.bi1003s00.
-
(2003)
Curr. Protoc. Bioinf.
-
-
Delcher, A.L.1
Salzberg, S.L.2
Phillippy, A.M.3
-
19
-
-
84868146121
-
Provirophages and transpovirons as the diverse mobilome of giant viruses
-
Desnues C., La Scola B., Yutin N., Fournous G., Robert C., Azza S., Jardot P., Monteil S., Campocasso A., Koonin E.V., Raoult D. Provirophages and transpovirons as the diverse mobilome of giant viruses. Proc. Nat. Acad. Sci. U.S.A 2012, 109:18078-18083.
-
(2012)
Proc. Nat. Acad. Sci. U.S.A
, vol.109
, pp. 18078-18083
-
-
Desnues, C.1
La Scola, B.2
Yutin, N.3
Fournous, G.4
Robert, C.5
Azza, S.6
Jardot, P.7
Monteil, S.8
Campocasso, A.9
Koonin, E.V.10
Raoult, D.11
-
20
-
-
3042666256
-
MUSCLE: multiple sequence alignment with high accuracy and high throughput
-
(%19)
-
Edgar R.C. MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Res. 2004, 32:1792-1797. (%19).
-
(2004)
Nucleic Acids Res.
, vol.32
, pp. 1792-1797
-
-
Edgar, R.C.1
-
21
-
-
0034568798
-
Evidence for symmetric chromosomal inversions around the replication origin in bacteria
-
(RESEARCH0011)
-
Eisen J.A., Heidelberg J.F., White O., Salzberg S.L. Evidence for symmetric chromosomal inversions around the replication origin in bacteria. Genome Biol. 2000, 1. (RESEARCH0011).
-
(2000)
Genome Biol.
, vol.1
-
-
Eisen, J.A.1
Heidelberg, J.F.2
White, O.3
Salzberg, S.L.4
-
22
-
-
67649967512
-
Lateral gene transfer, lineage-specific gene expansion and the evolution of Nucleo Cytoplasmic Large DNA viruses
-
Filee J. Lateral gene transfer, lineage-specific gene expansion and the evolution of Nucleo Cytoplasmic Large DNA viruses. J. Invertebr. Pathol 2009, 101:169-171.
-
(2009)
J. Invertebr. Pathol
, vol.101
, pp. 169-171
-
-
Filee, J.1
-
23
-
-
33845648979
-
I am what I eat and I eat what I am: acquisition of bacterial genes by giant viruses
-
Filee J., Siguier P., Chandler M. I am what I eat and I eat what I am: acquisition of bacterial genes by giant viruses. Trends Genet 2007, 23:10-15.
-
(2007)
Trends Genet
, vol.23
, pp. 10-15
-
-
Filee, J.1
Siguier, P.2
Chandler, M.3
-
24
-
-
0032871834
-
Finding families for genomic ORFans
-
Fischer D., Eisenberg D. Finding families for genomic ORFans. Bioinformatics 1999, 15:759-762.
-
(1999)
Bioinformatics
, vol.15
, pp. 759-762
-
-
Fischer, D.1
Eisenberg, D.2
-
25
-
-
78650627880
-
Giant virus with a remarkable complement of genes infects marine zooplankton
-
Fischer M.G., Allen M.J., Wilson W.H., Suttle C.A. Giant virus with a remarkable complement of genes infects marine zooplankton. Proc. Nat. Acad. Sci. U.S.A 2010, 107:19508-19513.
-
(2010)
Proc. Nat. Acad. Sci. U.S.A
, vol.107
, pp. 19508-19513
-
-
Fischer, M.G.1
Allen, M.J.2
Wilson, W.H.3
Suttle, C.A.4
-
26
-
-
79957649272
-
Mimivirus-like Particles in Acanthamoebae from Sewage Sludge
-
Gaze W.H., Morgan G., Zhang L., Wellington E.M. Mimivirus-like Particles in Acanthamoebae from Sewage Sludge. Emerg. Infect. Dis. 2011, 17:1127-1129.
-
(2011)
Emerg. Infect. Dis.
, vol.17
, pp. 1127-1129
-
-
Gaze, W.H.1
Morgan, G.2
Zhang, L.3
Wellington, E.M.4
-
27
-
-
23944516801
-
Mimivirus relatives in the sargasso sea
-
Ghedin E., Claverie J.M. Mimivirus relatives in the sargasso sea. Virol. J. 2005, 2:62.
-
(2005)
Virol. J.
, vol.2
, pp. 62
-
-
Ghedin, E.1
Claverie, J.M.2
-
28
-
-
23144433822
-
PHYML Online-a web server for fast maximum likelihood-based phylogenetic inference
-
Guindon S., Lethiec F., Duroux P., Gascuel O. PHYML Online-a web server for fast maximum likelihood-based phylogenetic inference. Nucleic Acids Res. 2005, 33:W557-W559.
-
(2005)
Nucleic Acids Res.
, vol.33
-
-
Guindon, S.1
Lethiec, F.2
Duroux, P.3
Gascuel, O.4
-
29
-
-
5344236782
-
Bacterial endosymbionts of free-living amoebae
-
Horn M., Wagner M. Bacterial endosymbionts of free-living amoebae. J. Eukaryot. Microbiol. 2004, 51:509-514.
-
(2004)
J. Eukaryot. Microbiol.
, vol.51
, pp. 509-514
-
-
Horn, M.1
Wagner, M.2
-
30
-
-
77949515650
-
R2cat: synteny plots and comparative assembly
-
Husemann P., Stoye J. r2cat: synteny plots and comparative assembly. Bioinformatics 2010, 26:570-571.
-
(2010)
Bioinformatics
, vol.26
, pp. 570-571
-
-
Husemann, P.1
Stoye, J.2
-
31
-
-
0035167322
-
Common origin of four diverse families of large eukaryotic DNA viruses
-
Iyer L.M., Aravind L., Koonin E.V. Common origin of four diverse families of large eukaryotic DNA viruses. J. Virol. 2001, 75:11720-11734.
-
(2001)
J. Virol.
, vol.75
, pp. 11720-11734
-
-
Iyer, L.M.1
Aravind, L.2
Koonin, E.V.3
-
32
-
-
33645076499
-
Evolutionary genomics of nucleo-cytoplasmic large DNA viruses
-
Iyer L.M., Balaji S., Koonin E.V., Aravind L. Evolutionary genomics of nucleo-cytoplasmic large DNA viruses. Virus Res. 2006, 117:156-184.
-
(2006)
Virus Res.
, vol.117
, pp. 156-184
-
-
Iyer, L.M.1
Balaji, S.2
Koonin, E.V.3
Aravind, L.4
-
33
-
-
0036078078
-
Essential genes are more evolutionarily conserved than are nonessential genes in bacteria
-
Jordan I.K., Rogozin I.B., Wolf Y.I., Koonin E.V. Essential genes are more evolutionarily conserved than are nonessential genes in bacteria. Genome Res. 2002, 12:962-968.
-
(2002)
Genome Res.
, vol.12
, pp. 962-968
-
-
Jordan, I.K.1
Rogozin, I.B.2
Wolf, Y.I.3
Koonin, E.V.4
-
34
-
-
72949103741
-
New dimensions of the virus world discovered through metagenomics
-
Kristensen D.M., Mushegian A.R., Dolja V.V., Koonin E.V. New dimensions of the virus world discovered through metagenomics. Trends Microbiol. 2010, 18:11-19.
-
(2010)
Trends Microbiol.
, vol.18
, pp. 11-19
-
-
Kristensen, D.M.1
Mushegian, A.R.2
Dolja, V.V.3
Koonin, E.V.4
-
35
-
-
2942538300
-
Versatile and open software for comparing large genomes
-
Kurtz S., Phillippy A., Delcher A.L., Smoot M., Shumway M., Antonescu C., Salzberg S.L. Versatile and open software for comparing large genomes. Genome Biol. 2004, 5:R12.
-
(2004)
Genome Biol.
, vol.5
-
-
Kurtz, S.1
Phillippy, A.2
Delcher, A.L.3
Smoot, M.4
Shumway, M.5
Antonescu, C.6
Salzberg, S.L.7
-
36
-
-
0242669214
-
A giant virus in amoebae
-
La Scola B., Audic S., Robert C., Jungang L., de Lamballerie X., Drancourt M., Birtles R., Claverie J.M., Raoult D. A giant virus in amoebae. Science 2003, 299:2033.
-
(2003)
Science
, vol.299
, pp. 2033
-
-
La Scola, B.1
Audic, S.2
Robert, C.3
Jungang, L.4
de Lamballerie, X.5
Drancourt, M.6
Birtles, R.7
Claverie, J.M.8
Raoult, D.9
-
37
-
-
77953695716
-
Tentative characterization of new environmental giant viruses by MALDI-TOF mass spectrometry
-
La Scola B., Campocasso A., N'Dong R., Fournous G., Barrassi L., Flaudrops C., Raoult D. Tentative characterization of new environmental giant viruses by MALDI-TOF mass spectrometry. Intervirology 2010, 53:344-353.
-
(2010)
Intervirology
, vol.53
, pp. 344-353
-
-
La Scola, B.1
Campocasso, A.2
N'Dong, R.3
Fournous, G.4
Barrassi, L.5
Flaudrops, C.6
Raoult, D.7
-
38
-
-
51349125147
-
The virophage as a unique parasite of the giant mimivirus
-
La Scola B., Desnues C., Pagnier I., Robert C., Barrassi L., Fournous G., Merchat M., Suzan-Monti M., Forterre P., Koonin E., Raoult D. The virophage as a unique parasite of the giant mimivirus. Nature 2008, 455:100-104.
-
(2008)
Nature
, vol.455
, pp. 100-104
-
-
La Scola, B.1
Desnues, C.2
Pagnier, I.3
Robert, C.4
Barrassi, L.5
Fournous, G.6
Merchat, M.7
Suzan-Monti, M.8
Forterre, P.9
Koonin, E.10
Raoult, D.11
-
39
-
-
79955142868
-
Proteinortho: detection of (co-)orthologs in large-scale analysis
-
(124-12)
-
Lechner M., Findeiss S., Steiner L., Marz M., Stadler P.F., Prohaska S.J. Proteinortho: detection of (co-)orthologs in large-scale analysis. BMC Bioinf. 2011, 12(124). (124-12). 10.1186/1471-2105-12-124.
-
(2011)
BMC Bioinf.
, vol.12
, Issue.124
-
-
Lechner, M.1
Findeiss, S.2
Steiner, L.3
Marz, M.4
Stadler, P.F.5
Prohaska, S.J.6
-
40
-
-
24044455869
-
Genome sequencing in microfabricated high-density picolitre reactors
-
Margulies M., Egholm M., Altman W.E., Attiya S., Bader J.S., Bemben L.A., Berka J., Braverman M.S., Chen Y.J., Chen Z., Dewell S.B., Du L., Fierro J.M., Gomes X.V., Godwin B.C., He W., Helgesen S., Ho C.H., Irzyk G.P., Jando S.C., Alenquer M.L., Jarvie T.P., Jirage K.B., Kim J.B., Knight J.R., Lanza J.R., Leamon J.H., Lefkowitz S.M., Lei M., Li J., Lohman K.L., Lu H., Makhijani V.B., McDade K.E., McKenna M.P., Myers E.W., Nickerson E., Nobile J.R., Plant R., Puc B.P., Ronan M.T., Roth G.T., Sarkis G.J., Simons J.F., Simpson J.W., Srinivasan M., Tartaro K.R., Tomasz A., Vogt K.A., Volkmer G.A., Wang S.H., Wang Y., Weiner M.P., Yu P., Begley R.F., Rothberg J.M. Genome sequencing in microfabricated high-density picolitre reactors. Nature 2005, 437:376-380.
-
(2005)
Nature
, vol.437
, pp. 376-380
-
-
Margulies, M.1
Egholm, M.2
Altman, W.E.3
Attiya, S.4
Bader, J.S.5
Bemben, L.A.6
Berka, J.7
Braverman, M.S.8
Chen, Y.J.9
Chen, Z.10
Dewell, S.B.11
Du, L.12
Fierro, J.M.13
Gomes, X.V.14
Godwin, B.C.15
He, W.16
Helgesen, S.17
Ho, C.H.18
Irzyk, G.P.19
Jando, S.C.20
Alenquer, M.L.21
Jarvie, T.P.22
Jirage, K.B.23
Kim, J.B.24
Knight, J.R.25
Lanza, J.R.26
Leamon, J.H.27
Lefkowitz, S.M.28
Lei, M.29
Li, J.30
Lohman, K.L.31
Lu, H.32
Makhijani, V.B.33
McDade, K.E.34
McKenna, M.P.35
Myers, E.W.36
Nickerson, E.37
Nobile, J.R.38
Plant, R.39
Puc, B.P.40
Ronan, M.T.41
Roth, G.T.42
Sarkis, G.J.43
Simons, J.F.44
Simpson, J.W.45
Srinivasan, M.46
Tartaro, K.R.47
Tomasz, A.48
Vogt, K.A.49
Volkmer, G.A.50
Wang, S.H.51
Wang, Y.52
Weiner, M.P.53
Yu, P.54
Begley, R.F.55
Rothberg, J.M.56
more..
-
41
-
-
0346734126
-
Extensive gene gain associated with adaptive evolution of poxviruses
-
McLysaght A., Baldi P.F., Gaut B.S. Extensive gene gain associated with adaptive evolution of poxviruses. Proc. Nat. Acad. Sci. U.S.A 2003, 100:15655-15660.
-
(2003)
Proc. Nat. Acad. Sci. U.S.A
, vol.100
, pp. 15655-15660
-
-
McLysaght, A.1
Baldi, P.F.2
Gaut, B.S.3
-
42
-
-
77950421915
-
Genome analysis of microorganisms living in amoebae reveals a melting pot of evolution
-
Moliner C., Fournier P.E., Raoult D. Genome analysis of microorganisms living in amoebae reveals a melting pot of evolution. FEMS Microbiol. Rev. 2010, 34:281-294.
-
(2010)
FEMS Microbiol. Rev.
, vol.34
, pp. 281-294
-
-
Moliner, C.1
Fournier, P.E.2
Raoult, D.3
-
43
-
-
39549096882
-
Marine mimivirus relatives are probably large algal viruses
-
Monier A., Larsen J.B., Sandaa R.A., Bratbak G., Claverie J.M., Ogata H. Marine mimivirus relatives are probably large algal viruses. Virol. J. 2008, 5:12.
-
(2008)
Virol. J.
, vol.5
, pp. 12
-
-
Monier, A.1
Larsen, J.B.2
Sandaa, R.A.3
Bratbak, G.4
Claverie, J.M.5
Ogata, H.6
-
44
-
-
84887107223
-
A decade of improvements in Mimiviridae and Marseilleviridae isolation from amoeba.A collection of giant viruses from amoebae
-
Pagnier I., Reteno D.G., Saadi H., Boughalmi M., Gaia M., Slimani M., Ngounga T., Bekliz M., Colson P., Raoult D., La Scola B., Pagnier I., Raoult D., La Scola B. A decade of improvements in Mimiviridae and Marseilleviridae isolation from amoeba.A collection of giant viruses from amoebae. Intervirology 2013, 56:354-363.
-
(2013)
Intervirology
, vol.56
, pp. 354-363
-
-
Pagnier, I.1
Reteno, D.G.2
Saadi, H.3
Boughalmi, M.4
Gaia, M.5
Slimani, M.6
Ngounga, T.7
Bekliz, M.8
Colson, P.9
Raoult, D.10
La Scola, B.11
Pagnier, I.12
Raoult, D.13
La Scola, B.14
-
45
-
-
84880443496
-
Pandoraviruses: amoeba viruses with genomes up to 2.5Mb reaching that of parasitic eukaryotes
-
(%19)
-
Philippe N., Legendre M., Doutre G., Coute Y., Poirot O., Lescot M., Arslan D., Seltzer V., Bertaux L., Bruley C., Garin J., Claverie J.M., Abergel C. Pandoraviruses: amoeba viruses with genomes up to 2.5Mb reaching that of parasitic eukaryotes. Science 2013, 341:281-286. (%19).
-
(2013)
Science
, vol.341
, pp. 281-286
-
-
Philippe, N.1
Legendre, M.2
Doutre, G.3
Coute, Y.4
Poirot, O.5
Lescot, M.6
Arslan, D.7
Seltzer, V.8
Bertaux, L.9
Bruley, C.10
Garin, J.11
Claverie, J.M.12
Abergel, C.13
-
46
-
-
8844266097
-
The 1.2-megabase genome sequence of Mimivirus
-
Raoult D., Audic S., Robert C., Abergel C., Renesto P., Ogata H., La Scola B., Suzan M., Claverie J.M. The 1.2-megabase genome sequence of Mimivirus. Science 2004, 306:1344-1350.
-
(2004)
Science
, vol.306
, pp. 1344-1350
-
-
Raoult, D.1
Audic, S.2
Robert, C.3
Abergel, C.4
Renesto, P.5
Ogata, H.6
La Scola, B.7
Suzan, M.8
Claverie, J.M.9
-
47
-
-
77953708302
-
Amoebae as genitors and reservoirs of giant viruses
-
Raoult D., Boyer M. Amoebae as genitors and reservoirs of giant viruses. Intervirology 2010, 53:321-329.
-
(2010)
Intervirology
, vol.53
, pp. 321-329
-
-
Raoult, D.1
Boyer, M.2
-
49
-
-
84887042011
-
Shan virus, isolation of a new Mimivirus from the stool of a Tunisian patient with pneumonia
-
Saadi H., Ikanga Reteno D.G., Colson P., Aherfi S., Minodier P., Pagnier I., Fenollar F., Robert C., Raoult D., La Scola B. Shan virus, isolation of a new Mimivirus from the stool of a Tunisian patient with pneumonia. Intervirology 2013, 56:424-429.
-
(2013)
Intervirology
, vol.56
, pp. 424-429
-
-
Saadi, H.1
Ikanga Reteno, D.G.2
Colson, P.3
Aherfi, S.4
Minodier, P.5
Pagnier, I.6
Fenollar, F.7
Robert, C.8
Raoult, D.9
La Scola, B.10
-
50
-
-
84880934902
-
First isolation of Mimivirus in a patient with pneumonia
-
Saadi H., Pagnier I., Colson P., KanounCherif J., Beji M., Boughalmi M., Azza S., Armstrong N., Robert C., Fournous G., LaScola B., Raoult D., Saadi, et al. First isolation of Mimivirus in a patient with pneumonia. Clin. Infect Dis. 2013, 57:e127-134.
-
(2013)
Clin. Infect Dis.
, vol.57
-
-
Saadi, H.1
Pagnier, I.2
Colson, P.3
KanounCherif, J.4
Beji, M.5
Boughalmi, M.6
Azza, S.7
Armstrong, N.8
Robert, C.9
Fournous, G.10
LaScola, B.11
Raoult, D.12
Saadi13
-
51
-
-
23144460836
-
The tRNAscan-SE, snoscan and snoGPS web servers for the detection of tRNAs and snoRNAs
-
Schattner P., Brooks A.N., Lowe T.M. The tRNAscan-SE, snoscan and snoGPS web servers for the detection of tRNAs and snoRNAs. Nucleic Acids Res. 2005, 33:W686-W689.
-
(2005)
Nucleic Acids Res.
, vol.33
-
-
Schattner, P.1
Brooks, A.N.2
Lowe, T.M.3
-
52
-
-
0030851338
-
The genome of molluscum contagiosum virus: analysis and comparison with other poxviruses
-
Senkevich T.G., Koonin E.V., Bugert J.J., Darai G., Moss B. The genome of molluscum contagiosum virus: analysis and comparison with other poxviruses. Virology 1997, 233:19-42.
-
(1997)
Virology
, vol.233
, pp. 19-42
-
-
Senkevich, T.G.1
Koonin, E.V.2
Bugert, J.J.3
Darai, G.4
Moss, B.5
-
53
-
-
0033956060
-
The COG database: a tool for genome-scale analysis of protein functions and evolution
-
Tatusov R.L., Galperin M.Y., Natale D.A., Koonin E.V. The COG database: a tool for genome-scale analysis of protein functions and evolution. Nucleic Acids Res. 2000, 28:33-36.
-
(2000)
Nucleic Acids Res.
, vol.28
, pp. 33-36
-
-
Tatusov, R.L.1
Galperin, M.Y.2
Natale, D.A.3
Koonin, E.V.4
-
54
-
-
77953694345
-
Amoeba/amoebal symbiont genetic transfers: lessons from giant virus neighbours
-
Thomas V., Greub G. Amoeba/amoebal symbiont genetic transfers: lessons from giant virus neighbours. Intervirology 2010, 53:254-267.
-
(2010)
Intervirology
, vol.53
, pp. 254-267
-
-
Thomas, V.1
Greub, G.2
-
55
-
-
33748453207
-
On the origin of microbial ORFans: quantifying the strength of the evidence for viral lateral transfer
-
Yin Y., Fischer D. On the origin of microbial ORFans: quantifying the strength of the evidence for viral lateral transfer. BMC Evol. Biol. 2006, 6:63.
-
(2006)
BMC Evol. Biol.
, vol.6
, pp. 63
-
-
Yin, Y.1
Fischer, D.2
-
56
-
-
39449104220
-
Identification and investigation of ORFans in the viral world
-
Yin Y., Fischer D. Identification and investigation of ORFans in the viral world. BMC Genomics 2008, 9:24.
-
(2008)
BMC Genomics
, vol.9
, pp. 24
-
-
Yin, Y.1
Fischer, D.2
-
57
-
-
84876156192
-
Related giant viruses in distant locations and different habitats: Acanthamoeba polyphaga moumouvirus represents a third lineage of the Mimiviridae that is close to the megavirus lineage
-
Yoosuf N., Yutin N., Colson P., Shabalina S.A., Pagnier I., Robert C., Azza S., Klose T., Wong J., Rossmann M.G., La Scola B., Raoult D., Koonin E.V. Related giant viruses in distant locations and different habitats: Acanthamoeba polyphaga moumouvirus represents a third lineage of the Mimiviridae that is close to the megavirus lineage. Genome Biol. Evol 2012, 4:1324-1330.
-
(2012)
Genome Biol. Evol
, vol.4
, pp. 1324-1330
-
-
Yoosuf, N.1
Yutin, N.2
Colson, P.3
Shabalina, S.A.4
Pagnier, I.5
Robert, C.6
Azza, S.7
Klose, T.8
Wong, J.9
Rossmann, M.G.10
La Scola, B.11
Raoult, D.12
Koonin, E.V.13
-
58
-
-
84875689946
-
Mimiviridae: clusters of orthologous genes, reconstruction of gene repertoire evolution and proposed expansion of the giant virus family
-
Yutin N., Colson P., Raoult D., Koonin E.V. Mimiviridae: clusters of orthologous genes, reconstruction of gene repertoire evolution and proposed expansion of the giant virus family. Virol. J. 2013, 10:106.
-
(2013)
Virol. J.
, vol.10
, pp. 106
-
-
Yutin, N.1
Colson, P.2
Raoult, D.3
Koonin, E.V.4
-
59
-
-
84864950902
-
Hidden evolutionary complexity of Nucleo-Cytoplasmic Large DNA viruses of eukaryotes
-
Yutin N., Koonin E.V. Hidden evolutionary complexity of Nucleo-Cytoplasmic Large DNA viruses of eukaryotes. Virol. J. 2012, 9:161.
-
(2012)
Virol. J.
, vol.9
, pp. 161
-
-
Yutin, N.1
Koonin, E.V.2
-
60
-
-
74549198854
-
Eukaryotic large nucleo-cytoplasmic DNA viruses: clusters of orthologous genes and reconstruction of viral genome evolution
-
Yutin N., Wolf Y.I., Raoult D., Koonin E.V. Eukaryotic large nucleo-cytoplasmic DNA viruses: clusters of orthologous genes and reconstruction of viral genome evolution. Virol. J. 2009, 6:223.
-
(2009)
Virol. J.
, vol.6
, pp. 223
-
-
Yutin, N.1
Wolf, Y.I.2
Raoult, D.3
Koonin, E.V.4
|