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Volumn 23, Issue 1, 2007, Pages 10-15

I am what I eat and I eat what I am: acquisition of bacterial genes by giant viruses

Author keywords

[No Author keywords available]

Indexed keywords

ALGA; AMOEBA; BACTERIAL GENE; DNA VIRUS; GENE LOCATION; GENE REPLICATION; GENETIC RECOMBINATION; INHERITANCE; MIMIVIRUS; NONHUMAN; NUCLEOCYTOPLASMIC LARGE DNA VIRUS; PHYCODNAVIRIDAE; PRIORITY JOURNAL; SHORT SURVEY; VIRUS GENOME;

EID: 33845648979     PISSN: 01689525     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.tig.2006.11.002     Document Type: Short Survey
Times cited : (107)

References (39)
  • 1
    • 33645076499 scopus 로고    scopus 로고
    • Evolutionary genomics of nucleo-cytoplasmic large DNA viruses
    • Iyer L.M., et al. Evolutionary genomics of nucleo-cytoplasmic large DNA viruses. Virus Res. 117 (2006) 156-184
    • (2006) Virus Res. , vol.117 , pp. 156-184
    • Iyer, L.M.1
  • 2
    • 14744279787 scopus 로고    scopus 로고
    • Virology: Gulliver among the Lilliputians
    • Koonin E.V. Virology: Gulliver among the Lilliputians. Curr. Biol. 15 (2005) R167-R169
    • (2005) Curr. Biol. , vol.15
    • Koonin, E.V.1
  • 3
    • 27644439476 scopus 로고    scopus 로고
    • Gene and genome duplication in Acanthamoeba polyphaga Mimivirus
    • Suhre K. Gene and genome duplication in Acanthamoeba polyphaga Mimivirus. J. Virol. 79 (2005) 14095-14101
    • (2005) J. Virol. , vol.79 , pp. 14095-14101
    • Suhre, K.1
  • 4
    • 0346599192 scopus 로고    scopus 로고
    • Unusual life style of giant chlorella viruses
    • Van Etten J.L. Unusual life style of giant chlorella viruses. Annu. Rev. Genet. 37 (2003) 153-195
    • (2003) Annu. Rev. Genet. , vol.37 , pp. 153-195
    • Van Etten, J.L.1
  • 5
    • 8844266097 scopus 로고    scopus 로고
    • The 1.2-megabase genome sequence of Mimivirus
    • Raoult D., et al. The 1.2-megabase genome sequence of Mimivirus. Science 306 (2004) 1344-1350
    • (2004) Science , vol.306 , pp. 1344-1350
    • Raoult, D.1
  • 6
    • 18844442298 scopus 로고    scopus 로고
    • Comment on "The 1.2-megabase genome sequence of Mimivirus"
    • Moreira D., and Lopez-Garcia P. Comment on "The 1.2-megabase genome sequence of Mimivirus". Science 308 (2005) 1114
    • (2005) Science , vol.308 , pp. 1114
    • Moreira, D.1    Lopez-Garcia, P.2
  • 7
    • 0033514996 scopus 로고    scopus 로고
    • Evolutionary relationships among diverse bacteriophages and prophages: all the world's a phage
    • Hendrix R.W., et al. Evolutionary relationships among diverse bacteriophages and prophages: all the world's a phage. Proc. Natl. Acad. Sci. U. S. A. 96 (1999) 2192-2197
    • (1999) Proc. Natl. Acad. Sci. U. S. A. , vol.96 , pp. 2192-2197
    • Hendrix, R.W.1
  • 8
    • 33645061768 scopus 로고    scopus 로고
    • Mimivirus and the emerging concept of "giant" virus
    • Claverie J.M., et al. Mimivirus and the emerging concept of "giant" virus. Virus Res. 117 (2006) 133-144
    • (2006) Virus Res. , vol.117 , pp. 133-144
    • Claverie, J.M.1
  • 9
    • 0033935187 scopus 로고    scopus 로고
    • The contributions of replication orientation, gene direction, and signal sequences to base-composition asymmetries in bacterial genomes
    • Tillier E.R., and Collins R.A. The contributions of replication orientation, gene direction, and signal sequences to base-composition asymmetries in bacterial genomes. J. Mol. Evol. 50 (2000) 249-257
    • (2000) J. Mol. Evol. , vol.50 , pp. 249-257
    • Tillier, E.R.1    Collins, R.A.2
  • 10
    • 0034947939 scopus 로고    scopus 로고
    • Effects of DNA structure and homology length on vaccinia virus recombination
    • Yao X.D., and Evans D.H. Effects of DNA structure and homology length on vaccinia virus recombination. J. Virol. 75 (2001) 6923-6932
    • (2001) J. Virol. , vol.75 , pp. 6923-6932
    • Yao, X.D.1    Evans, D.H.2
  • 11
    • 23944506044 scopus 로고    scopus 로고
    • Mobile genetic elements: the agents of open source evolution
    • Frost L.S., et al. Mobile genetic elements: the agents of open source evolution. Nat. Rev. Microbiol. 3 (2005) 722-732
    • (2005) Nat. Rev. Microbiol. , vol.3 , pp. 722-732
    • Frost, L.S.1
  • 12
    • 33644546397 scopus 로고    scopus 로고
    • Ameba-associated microorganisms and diagnosis of nosocomial pneumonia
    • Berger P., et al. Ameba-associated microorganisms and diagnosis of nosocomial pneumonia. Emerg. Infect. Dis. 12 (2006) 248-255
    • (2006) Emerg. Infect. Dis. , vol.12 , pp. 248-255
    • Berger, P.1
  • 13
    • 0028815569 scopus 로고
    • Bacteriolytic activities of the free-living soil amoebae, Acanthamoeba castellanii, Acanthamoeba polyphaga and Hartmannella vermiformis
    • Weekers P.H., et al. Bacteriolytic activities of the free-living soil amoebae, Acanthamoeba castellanii, Acanthamoeba polyphaga and Hartmannella vermiformis. Antonie Van Leeuwenhoek 68 (1995) 237-243
    • (1995) Antonie Van Leeuwenhoek , vol.68 , pp. 237-243
    • Weekers, P.H.1
  • 14
    • 12244295183 scopus 로고    scopus 로고
    • Amoebae as training grounds for intracellular bacterial pathogens
    • Molmeret M., et al. Amoebae as training grounds for intracellular bacterial pathogens. Appl. Environ. Microbiol. 71 (2005) 20-28
    • (2005) Appl. Environ. Microbiol. , vol.71 , pp. 20-28
    • Molmeret, M.1
  • 15
    • 3042687722 scopus 로고    scopus 로고
    • Disruption of the phagosomal membrane and egress of Legionella pneumophila into the cytoplasm during the last stages of intracellular infection of macrophages and Acanthamoeba polyphaga
    • Molmeret M., et al. Disruption of the phagosomal membrane and egress of Legionella pneumophila into the cytoplasm during the last stages of intracellular infection of macrophages and Acanthamoeba polyphaga. Infect. Immun. 72 (2004) 4040-4051
    • (2004) Infect. Immun. , vol.72 , pp. 4040-4051
    • Molmeret, M.1
  • 16
    • 0036946865 scopus 로고    scopus 로고
    • The genus Caedibacter comprises endosymbionts of Paramecium spp. related to the Rickettsiales (Alphaproteobacteria) and to Francisella tularensis (Gammaproteobacteria)
    • Beier C.L., et al. The genus Caedibacter comprises endosymbionts of Paramecium spp. related to the Rickettsiales (Alphaproteobacteria) and to Francisella tularensis (Gammaproteobacteria). Appl. Environ. Microbiol. 68 (2002) 6043-6050
    • (2002) Appl. Environ. Microbiol. , vol.68 , pp. 6043-6050
    • Beier, C.L.1
  • 17
    • 0035984623 scopus 로고    scopus 로고
    • Phycodnaviridae - large DNA algal viruses
    • Van Etten J.L., et al. Phycodnaviridae - large DNA algal viruses. Arch. Virol. 147 (2002) 1479-1516
    • (2002) Arch. Virol. , vol.147 , pp. 1479-1516
    • Van Etten, J.L.1
  • 18
    • 26844544091 scopus 로고    scopus 로고
    • Symbiotic Chlorella sp. of the ciliate Paramecium bursaria do not prevent acidification and lysosomal fusion of host digestive vacuoles during infection
    • Kodama Y., and Fujishima M. Symbiotic Chlorella sp. of the ciliate Paramecium bursaria do not prevent acidification and lysosomal fusion of host digestive vacuoles during infection. Protoplasma 225 (2005) 191-203
    • (2005) Protoplasma , vol.225 , pp. 191-203
    • Kodama, Y.1    Fujishima, M.2
  • 19
    • 0023213453 scopus 로고
    • High-frequency homologous recombination in vaccinia virus DNA
    • Ball L.A. High-frequency homologous recombination in vaccinia virus DNA. J. Virol. 61 (1987) 1788-1795
    • (1987) J. Virol. , vol.61 , pp. 1788-1795
    • Ball, L.A.1
  • 20
    • 0023872382 scopus 로고
    • High levels of genetic recombination among cotransfected plasmid DNAs in poxvirus-infected mammalian cells
    • Evans D.H., et al. High levels of genetic recombination among cotransfected plasmid DNAs in poxvirus-infected mammalian cells. J. Virol. 62 (1988) 367-375
    • (1988) J. Virol. , vol.62 , pp. 367-375
    • Evans, D.H.1
  • 21
    • 0024511723 scopus 로고
    • Intramolecular homologous recombination in cells infected with temperature-sensitive mutants of vaccinia virus
    • Merchlinsky M. Intramolecular homologous recombination in cells infected with temperature-sensitive mutants of vaccinia virus. J. Virol. 63 (1989) 2030-2035
    • (1989) J. Virol. , vol.63 , pp. 2030-2035
    • Merchlinsky, M.1
  • 22
    • 0035902485 scopus 로고    scopus 로고
    • Two recombination-dependent DNA replication pathways of bacteriophage T4, and their roles in mutagenesis and horizontal gene transfer
    • Mosig G., et al. Two recombination-dependent DNA replication pathways of bacteriophage T4, and their roles in mutagenesis and horizontal gene transfer. Proc. Natl. Acad. Sci. U. S. A. 98 (2001) 8306-8311
    • (2001) Proc. Natl. Acad. Sci. U. S. A. , vol.98 , pp. 8306-8311
    • Mosig, G.1
  • 23
    • 33748165572 scopus 로고    scopus 로고
    • A selective barrier to horizontal gene transfer in the T4-type bacteriophages that has preserved a core genome with the viral replication and structural genes
    • Filee J., et al. A selective barrier to horizontal gene transfer in the T4-type bacteriophages that has preserved a core genome with the viral replication and structural genes. Mol. Biol. Evol. 23 (2006) 1688-1696
    • (2006) Mol. Biol. Evol. , vol.23 , pp. 1688-1696
    • Filee, J.1
  • 24
    • 0033541947 scopus 로고    scopus 로고
    • Vaccinia virus DNA polymerase promotes DNA pairing and strand-transfer reactions
    • Willer D.O., et al. Vaccinia virus DNA polymerase promotes DNA pairing and strand-transfer reactions. Virology 257 (1999) 511-523
    • (1999) Virology , vol.257 , pp. 511-523
    • Willer, D.O.1
  • 25
    • 0034534405 scopus 로고    scopus 로고
    • In vitro concatemer formation catalyzed by vaccinia virus DNA polymerase
    • Willer D.O., et al. In vitro concatemer formation catalyzed by vaccinia virus DNA polymerase. Virology 278 (2000) 562-569
    • (2000) Virology , vol.278 , pp. 562-569
    • Willer, D.O.1
  • 26
    • 0021815409 scopus 로고
    • Genetic recombination of the DNA plant virus PBCV-1 in a chlorella-like alga
    • Tessman I. Genetic recombination of the DNA plant virus PBCV-1 in a chlorella-like alga. Virology 145 (1985) 319-322
    • (1985) Virology , vol.145 , pp. 319-322
    • Tessman, I.1
  • 27
    • 0027139842 scopus 로고
    • Characterization of the terminal inverted repeats and their neighboring tandem repeats in the Chlorella CVK1 virus genome
    • Yamada T., and Higashiyama T. Characterization of the terminal inverted repeats and their neighboring tandem repeats in the Chlorella CVK1 virus genome. Mol. Gen. Genet. 241 (1993) 554-563
    • (1993) Mol. Gen. Genet. , vol.241 , pp. 554-563
    • Yamada, T.1    Higashiyama, T.2
  • 28
    • 33747106195 scopus 로고    scopus 로고
    • Genome sequence diversity and clues to the evolution of variola (smallpox) virus
    • Esposito J.J., et al. Genome sequence diversity and clues to the evolution of variola (smallpox) virus. Science 313 (2006) 807-812
    • (2006) Science , vol.313 , pp. 807-812
    • Esposito, J.J.1
  • 29
    • 0033624563 scopus 로고    scopus 로고
    • RecE/RecT and Redalpha/Redbeta initiate double-stranded break repair by specifically interacting with their respective partners
    • Muyrers J.P., et al. RecE/RecT and Redalpha/Redbeta initiate double-stranded break repair by specifically interacting with their respective partners. Genes Dev. 14 (2000) 1971-1982
    • (2000) Genes Dev. , vol.14 , pp. 1971-1982
    • Muyrers, J.P.1
  • 30
    • 4143140939 scopus 로고    scopus 로고
    • Catalysis of strand exchange by the HSV-1 UL12 and ICP8 proteins: potent ICP8 recombinase activity is revealed upon resection of dsDNA substrate by nuclease
    • Reuven N.B., et al. Catalysis of strand exchange by the HSV-1 UL12 and ICP8 proteins: potent ICP8 recombinase activity is revealed upon resection of dsDNA substrate by nuclease. J. Mol. Biol. 342 (2004) 57-71
    • (2004) J. Mol. Biol. , vol.342 , pp. 57-71
    • Reuven, N.B.1
  • 31
    • 0031310666 scopus 로고    scopus 로고
    • Site-specific ribonuclease activity of eukaryotic DNA topoisomerase I
    • Sekiguchi J., and Shuman S. Site-specific ribonuclease activity of eukaryotic DNA topoisomerase I. Mol. Cell 1 (1997) 89-97
    • (1997) Mol. Cell , vol.1 , pp. 89-97
    • Sekiguchi, J.1    Shuman, S.2
  • 32
    • 0033776496 scopus 로고    scopus 로고
    • Recombinogenic flap ligation pathway for intrinsic repair of topoisomerase IB-induced double-strand breaks
    • Cheng C., and Shuman S. Recombinogenic flap ligation pathway for intrinsic repair of topoisomerase IB-induced double-strand breaks. Mol. Cell. Biol. 20 (2000) 8059-8068
    • (2000) Mol. Cell. Biol. , vol.20 , pp. 8059-8068
    • Cheng, C.1    Shuman, S.2
  • 33
    • 33645087776 scopus 로고    scopus 로고
    • Characterization of mimivirus DNA topoisomerase IB suggests horizontal gene transfer between eukaryal viruses and bacteria
    • Benarroch D., et al. Characterization of mimivirus DNA topoisomerase IB suggests horizontal gene transfer between eukaryal viruses and bacteria. J. Virol. 80 (2006) 314-321
    • (2006) J. Virol. , vol.80 , pp. 314-321
    • Benarroch, D.1
  • 34
    • 25144496154 scopus 로고    scopus 로고
    • Transposition of ISHp608, member of an unusual family of bacterial insertion sequences
    • Ton-Hoang B., et al. Transposition of ISHp608, member of an unusual family of bacterial insertion sequences. EMBO J. 24 (2005) 3325-3338
    • (2005) EMBO J. , vol.24 , pp. 3325-3338
    • Ton-Hoang, B.1
  • 35
    • 0037712174 scopus 로고    scopus 로고
    • Structural and functional characteristics of homing endonucleases
    • Guhan N., and Muniyappa K. Structural and functional characteristics of homing endonucleases. Crit. Rev. Biochem. Mol. Biol. 38 (2003) 199-248
    • (2003) Crit. Rev. Biochem. Mol. Biol. , vol.38 , pp. 199-248
    • Guhan, N.1    Muniyappa, K.2
  • 36
    • 15544379710 scopus 로고    scopus 로고
    • A new example of viral intein in Mimivirus
    • Ogata H., et al. A new example of viral intein in Mimivirus. Virol. J. 2 (2005) 8
    • (2005) Virol. J. , vol.2 , pp. 8
    • Ogata, H.1
  • 37
    • 0025183708 scopus 로고
    • Basic local alignment search tool
    • Altschul S.F., et al. Basic local alignment search tool. J. Mol. Biol. 215 (1990) 403-410
    • (1990) J. Mol. Biol. , vol.215 , pp. 403-410
    • Altschul, S.F.1
  • 38
    • 0027494836 scopus 로고
    • MUST, a computer package of Management Utilities for Sequences and Trees
    • Philippe H. MUST, a computer package of Management Utilities for Sequences and Trees. Nucleic Acids Res. 21 (1993) 5264-5272
    • (1993) Nucleic Acids Res. , vol.21 , pp. 5264-5272
    • Philippe, H.1
  • 39
    • 33846391192 scopus 로고    scopus 로고
    • Sequence and annotation of the 369-kb NY-2A ad the 345-kb AR158 virusts that infect Chlorella NC64A
    • 10.1016/j.virol.2006.08.034
    • Fitzgerald L.A., et al. Sequence and annotation of the 369-kb NY-2A ad the 345-kb AR158 virusts that infect Chlorella NC64A. Virology (2006) 10.1016/j.virol.2006.08.034
    • (2006) Virology
    • Fitzgerald, L.A.1


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