-
1
-
-
55549119927
-
Evolution of human endogenous retroviral sequences: a conceptual account
-
doi:10.1007/s00018-008-8495-2
-
Blikstad V, Benachenhou F, Sperber GO, Blomberg J. Evolution of human endogenous retroviral sequences: a conceptual account. Cell Mol Life Sci (2008) 65:3348-65. doi:10.1007/s00018-008-8495-2
-
(2008)
Cell Mol Life Sci
, vol.65
, pp. 3348-3365
-
-
Blikstad, V.1
Benachenhou, F.2
Sperber, G.O.3
Blomberg, J.4
-
2
-
-
33645522272
-
Many human endogenous retrovirus K (HERV-K) proviruses are unique to humans
-
doi:10.1016/S0960-9822(99)80390-X
-
Barbulescu M, Turner G, Seaman MI, Deinard AS, Kidd KK, Lenz J. Many human endogenous retrovirus K (HERV-K) proviruses are unique to humans. Curr Biol (1999) 9:861-8. doi:10.1016/S0960-9822(99)80390-X
-
(1999)
Curr Biol
, vol.9
, pp. 861-868
-
-
Barbulescu, M.1
Turner, G.2
Seaman, M.I.3
Deinard, A.S.4
Kidd, K.K.5
Lenz, J.6
-
3
-
-
0031797726
-
Human-specific integrations of the HERV-K endogenous retrovirus family
-
Medstrand P, Mager DL. Human-specific integrations of the HERV-K endogenous retrovirus family. J Virol (1998) 72:9782-7.
-
(1998)
J Virol
, vol.72
, pp. 9782-9787
-
-
Medstrand, P.1
Mager, D.L.2
-
4
-
-
0035734951
-
Evidence for genomic rearrangements mediated by human endogenous retroviruses during primate evolution
-
doi:10.1038/ng775
-
Hughes JF, Coffin JM. Evidence for genomic rearrangements mediated by human endogenous retroviruses during primate evolution. Nat Genet (2001) 29:487-9. doi:10.1038/ng775
-
(2001)
Nat Genet
, vol.29
, pp. 487-489
-
-
Hughes, J.F.1
Coffin, J.M.2
-
5
-
-
25144501550
-
Genomewide screening reveals high levels of insertional polymorphism in the human endogenous retrovirus family HERV-K(HML2): implications for present-day activity
-
doi:10.1128/JVI.79.19.12507-12514.2005
-
Belshaw R, Dawson ALA, Woolven-Allen J, Redding J, Burt A, Tristem M. Genomewide screening reveals high levels of insertional polymorphism in the human endogenous retrovirus family HERV-K(HML2): implications for present-day activity. J Virol (2005) 79:12507-14. doi:10.1128/JVI.79.19.12507-12514.2005
-
(2005)
J Virol
, vol.79
, pp. 12507-12514
-
-
Belshaw, R.1
Dawson, A.L.A.2
Woolven-Allen, J.3
Redding, J.4
Burt, A.5
Tristem, M.6
-
6
-
-
0037099025
-
Genome-wide comparison of differences in the integration sites of interspersed repeats between closely related genomes
-
doi:10.1093/nar/gnf071
-
Mamedov I, Batrak A, Buzdin A, Arzumanyan E, Lebedev Y, Sverdlov ED. Genome-wide comparison of differences in the integration sites of interspersed repeats between closely related genomes. Nucleic Acids Res (2002) 30:e71. doi:10.1093/nar/gnf071
-
(2002)
Nucleic Acids Res
, vol.30
-
-
Mamedov, I.1
Batrak, A.2
Buzdin, A.3
Arzumanyan, E.4
Lebedev, Y.5
Sverdlov, E.D.6
-
7
-
-
79957492160
-
Human endogenous retrovirus K106 (HERV-K106) was infectious after the emergence of anatomically modern humans
-
doi:10.1371/journal.pone.0020234
-
Jha AR, Nixon DF, Rosenberg MG, Martin JN, Deeks SG, Hudson RR, et al. Human endogenous retrovirus K106 (HERV-K106) was infectious after the emergence of anatomically modern humans. PLoS ONE (2011) 6:e20234. doi:10.1371/journal.pone.0020234
-
(2011)
PLoS ONE
, vol.6
-
-
Jha, A.R.1
Nixon, D.F.2
Rosenberg, M.G.3
Martin, J.N.4
Deeks, S.G.5
Hudson, R.R.6
-
8
-
-
84861863387
-
Neanderthal and Denisovan retroviruses
-
doi:10.1016/j.cub.2012.04.049
-
Agoni L, Golden A, Guha C, Lenz J. Neanderthal and Denisovan retroviruses. Curr Biol (2012) 22:R437-8. doi:10.1016/j.cub.2012.04.049
-
(2012)
Curr Biol
, vol.22
-
-
Agoni, L.1
Golden, A.2
Guha, C.3
Lenz, J.4
-
9
-
-
0022495561
-
Molecular cloning and long terminal repeat sequences of human endogenous retrovirus genes related to types A and B retrovirus genes
-
Ono M. Molecular cloning and long terminal repeat sequences of human endogenous retrovirus genes related to types A and B retrovirus genes. J Virol (1986) 58:937-44.
-
(1986)
J Virol
, vol.58
, pp. 937-944
-
-
Ono, M.1
-
10
-
-
0023010394
-
Nucleotide sequence of human endogenous retrovirus genome related to the mouse mammary tumor virus genome
-
Ono M, Yasunaga T, Miyata T, Ushikubo H. Nucleotide sequence of human endogenous retrovirus genome related to the mouse mammary tumor virus genome. J Virol (1986) 60:589-98.
-
(1986)
J Virol
, vol.60
, pp. 589-598
-
-
Ono, M.1
Yasunaga, T.2
Miyata, T.3
Ushikubo, H.4
-
11
-
-
0029938821
-
The viruses in all of us: characteristics and biological significance of human endogenous retrovirus sequences
-
doi:10.1073/pnas.93.11.5177
-
Löwer R, Löwer J, Kurth R. The viruses in all of us: characteristics and biological significance of human endogenous retrovirus sequences. Proc Natl Acad Sci U S A (1996) 93:5177-84. doi:10.1073/pnas.93.11.5177
-
(1996)
Proc Natl Acad Sci U S A
, vol.93
, pp. 5177-5184
-
-
Löwer, R.1
Löwer, J.2
Kurth, R.3
-
12
-
-
0032979719
-
An almost-intact human endogenous retrovirus K on human chromosome 7
-
doi:10.1038/6766
-
Mayer J, Sauter M, Rácz A, Scherer D, Mueller-Lantzsch N, Meese E. An almost-intact human endogenous retrovirus K on human chromosome 7. Nat Genet (1999) 21:257-8. doi:10.1038/6766
-
(1999)
Nat Genet
, vol.21
, pp. 257-258
-
-
Mayer, J.1
Sauter, M.2
Rácz, A.3
Scherer, D.4
Mueller-Lantzsch, N.5
Meese, E.6
-
13
-
-
0035797901
-
Insertional polymorphisms of full-length endogenous retroviruses in humans
-
doi:10.1016/S0960-9822(01)00455-9
-
Turner G, Barbulescu M, Su M, Jensen-Seaman MI, Kidd KK, Lenz J. Insertional polymorphisms of full-length endogenous retroviruses in humans. Curr Biol (2001) 11:1531-5. doi:10.1016/S0960-9822(01)00455-9
-
(2001)
Curr Biol
, vol.11
, pp. 1531-1535
-
-
Turner, G.1
Barbulescu, M.2
Su, M.3
Jensen-Seaman, M.I.4
Kidd, K.K.5
Lenz, J.6
-
14
-
-
33845296602
-
Identification of an infectious progenitor for the multiple-copy HERV-K human endogenous retroelements
-
doi:10.1101/gr.5565706
-
Dewannieux M, Harper F, Richaud A, Letzelter C, Ribet D, Pierron G, et al. Identification of an infectious progenitor for the multiple-copy HERV-K human endogenous retroelements. Genome Res (2006) 16:1548-56. doi:10.1101/gr.5565706
-
(2006)
Genome Res
, vol.16
, pp. 1548-1556
-
-
Dewannieux, M.1
Harper, F.2
Richaud, A.3
Letzelter, C.4
Ribet, D.5
Pierron, G.6
-
15
-
-
33846542981
-
Reconstitution of an infectious human endogenous retrovirus
-
doi:10.1371/journal.ppat.0030010
-
Lee YN, Bieniasz PD. Reconstitution of an infectious human endogenous retrovirus. PLoS Pathog (2007) 3:e10. doi:10.1371/journal.ppat.0030010
-
(2007)
PLoS Pathog
, vol.3
-
-
Lee, Y.N.1
Bieniasz, P.D.2
-
16
-
-
80455158263
-
Identification characterization, and comparative genomic distribution of the HERV-K (HML-2) group of human endogenous retroviruses
-
doi:10.1186/1742-4690-8-90
-
Subramanian RP, Wildschutte JH, Russo C, Coffin JM. Identification characterization, and comparative genomic distribution of the HERV-K (HML-2) group of human endogenous retroviruses. Retrovirology (2011) 8:90. doi:10.1186/1742-4690-8-90
-
(2011)
Retrovirology
, vol.8
, pp. 90
-
-
Subramanian, R.P.1
Wildschutte, J.H.2
Russo, C.3
Coffin, J.M.4
-
17
-
-
0035873870
-
A HERV-K provirus in chimpanzees, bonobos and gorillas, but not humans
-
doi:10.1016/S0960-9822(01)00227-5
-
Barbulescu M, Turner G, Su M, Kim R, Jensen-Seaman MI, Deinard AS, et al. A HERV-K provirus in chimpanzees, bonobos and gorillas, but not humans. Curr Biol (2001) 11:779-83. doi:10.1016/S0960-9822(01)00227-5
-
(2001)
Curr Biol
, vol.11
, pp. 779-783
-
-
Barbulescu, M.1
Turner, G.2
Su, M.3
Kim, R.4
Jensen-Seaman, M.I.5
Deinard, A.S.6
-
18
-
-
0033621090
-
Constructing primate phylogenies from ancient retrovirus sequences
-
doi:10.1073/pnas.96.18.10254
-
Johnson WE, Coffin JM. Constructing primate phylogenies from ancient retrovirus sequences. Proc Natl Acad Sci U S A (1999) 96:10254-60. doi:10.1073/pnas.96.18.10254
-
(1999)
Proc Natl Acad Sci U S A
, vol.96
, pp. 10254-10260
-
-
Johnson, W.E.1
Coffin, J.M.2
-
19
-
-
1842687449
-
Long-term reinfection of the human genome by endogenous retroviruses
-
doi:10.1073/pnas.0307800101
-
Belshaw R, Pereira V, Katzourakis A, Talbot G, Paces J, Burt A, et al. Long-term reinfection of the human genome by endogenous retroviruses. Proc Natl Acad Sci U S A (2004) 101:4894-9. doi:10.1073/pnas.0307800101
-
(2004)
Proc Natl Acad Sci U S A
, vol.101
, pp. 4894-4899
-
-
Belshaw, R.1
Pereira, V.2
Katzourakis, A.3
Talbot, G.4
Paces, J.5
Burt, A.6
-
20
-
-
1242319532
-
Human endogenous retrovirus K solo-LTR formation and insertional polymorphisms: implications for human and viral evolution
-
doi:10.1073/pnas.0307885100
-
Hughes JF, Coffin JM. Human endogenous retrovirus K solo-LTR formation and insertional polymorphisms: implications for human and viral evolution. Proc Natl Acad Sci U S A (2004) 101:1668-72. doi:10.1073/pnas.0307885100
-
(2004)
Proc Natl Acad Sci U S A
, vol.101
, pp. 1668-1672
-
-
Hughes, J.F.1
Coffin, J.M.2
-
21
-
-
0036281673
-
A novel gene from the human endogenous retrovirus K expressed in transformed cells
-
Armbruester V, Sauter M, Krautkraemer E, Meese E, Kleiman A, Best B, et al. A novel gene from the human endogenous retrovirus K expressed in transformed cells. Clin Cancer Res (2002) 8:1800-7.
-
(2002)
Clin Cancer Res
, vol.8
, pp. 1800-1807
-
-
Armbruester, V.1
Sauter, M.2
Krautkraemer, E.3
Meese, E.4
Kleiman, A.5
Best, B.6
-
22
-
-
23844558503
-
Human endogenous retroviruses: from infectious elements to human genes
-
doi:10.1159/000084964
-
de Parseval N, Heidmann T. Human endogenous retroviruses: from infectious elements to human genes. Cytogenet Genome Res (2005) 110:318-32. doi:10.1159/000084964
-
(2005)
Cytogenet Genome Res
, vol.110
, pp. 318-332
-
-
de Parseval, N.1
Heidmann, T.2
-
23
-
-
55549145080
-
Endogenous retroviruses and cancer
-
doi:10.1007/s00018-008-8496-1
-
Ruprecht K, Mayer J, Sauter M, Roemer K, Mueller-Lantzsch N. Endogenous retroviruses and cancer. Cell Mol Life Sci (2008) 65:3366-82. doi:10.1007/s00018-008-8496-1
-
(2008)
Cell Mol Life Sci
, vol.65
, pp. 3366-3382
-
-
Ruprecht, K.1
Mayer, J.2
Sauter, M.3
Roemer, K.4
Mueller-Lantzsch, N.5
-
24
-
-
34249819684
-
Physical and functional interactions of human endogenous retrovirus proteins Np9 and rec with the promyelocytic leukemia zinc finger protein
-
doi:10.1128/JVI.02771-06
-
Denne M, Sauter M, Armbruester V, Licht JD, Roemer K, Mueller-Lantzsch N. Physical and functional interactions of human endogenous retrovirus proteins Np9 and rec with the promyelocytic leukemia zinc finger protein. J Virol (2007) 81:5607-16. doi:10.1128/JVI.02771-06
-
(2007)
J Virol
, vol.81
, pp. 5607-5616
-
-
Denne, M.1
Sauter, M.2
Armbruester, V.3
Licht, J.D.4
Roemer, K.5
Mueller-Lantzsch, N.6
-
25
-
-
77952697526
-
Human endogenous retrovirus protein Rec interacts with the testicular zinc-finger protein and androgen receptor
-
doi:10.1099/vir.0.014241-0
-
Kaufmann S, Sauter M, Schmitt M, Baumert B, Best B, Boese A, et al. Human endogenous retrovirus protein Rec interacts with the testicular zinc-finger protein and androgen receptor. J Gen Virol (2010) 91:1494-502. doi:10.1099/vir.0.014241-0
-
(2010)
J Gen Virol
, vol.91
, pp. 1494-1502
-
-
Kaufmann, S.1
Sauter, M.2
Schmitt, M.3
Baumert, B.4
Best, B.5
Boese, A.6
-
26
-
-
38849133558
-
Variable transcriptional activity of endogenous retroviruses in human breast cancer
-
doi:10.1128/JVI.02115-07
-
Frank O, Verbeke C, Schwarz N, Mayer J, Fabarius A, Hehlmann R, et al. Variable transcriptional activity of endogenous retroviruses in human breast cancer. J Virol (2008) 82:1808-18. doi:10.1128/JVI.02115-07
-
(2008)
J Virol
, vol.82
, pp. 1808-1818
-
-
Frank, O.1
Verbeke, C.2
Schwarz, N.3
Mayer, J.4
Fabarius, A.5
Hehlmann, R.6
-
27
-
-
56449110842
-
Identification of the HERV-K gag antigen in prostate cancer by SEREX using autologous patient serum and its immunogenicity
-
Ishida T, Obata Y, Ohara N, Matsushita H, Sato S, Uenaka A, et al. Identification of the HERV-K gag antigen in prostate cancer by SEREX using autologous patient serum and its immunogenicity. Cancer Immun (2008) 8:15.
-
(2008)
Cancer Immun
, vol.8
, pp. 15
-
-
Ishida, T.1
Obata, Y.2
Ohara, N.3
Matsushita, H.4
Sato, S.5
Uenaka, A.6
-
28
-
-
0028950010
-
Human endogenous retrovirus K10: expression of Gag protein and detection of antibodies in patients with seminomas
-
Sauter M, Schommer S, Kremmer E, Remberger K, Dölken G, Lemm I, et al. Human endogenous retrovirus K10: expression of Gag protein and detection of antibodies in patients with seminomas. J Virol (1995) 69:414-21.
-
(1995)
J Virol
, vol.69
, pp. 414-421
-
-
Sauter, M.1
Schommer, S.2
Kremmer, E.3
Remberger, K.4
Dölken, G.5
Lemm, I.6
-
29
-
-
20144381235
-
Expression of human endogenous retrovirus K in melanomas and melanoma cell lines
-
doi:10.1158/0008-5472.CAN-04-2983
-
Buscher K. Expression of human endogenous retrovirus K in melanomas and melanoma cell lines. Cancer Res (2005) 65:4172-80. doi:10.1158/0008-5472.CAN-04-2983
-
(2005)
Cancer Res
, vol.65
, pp. 4172-4180
-
-
Buscher, K.1
-
30
-
-
0027244861
-
Evidence that HERV-K is the endogenous retrovirus sequence that codes for the human teratocarcinoma-derived retrovirus HTDV
-
doi:10.1006/viro.1993.1487
-
Boller K, König H, Sauter M, Mueller-Lantzsch N, Löwer R, Löwer J, et al. Evidence that HERV-K is the endogenous retrovirus sequence that codes for the human teratocarcinoma-derived retrovirus HTDV. Virology (1993) 196:349-53. doi:10.1006/viro.1993.1487
-
(1993)
Virology
, vol.196
, pp. 349-353
-
-
Boller, K.1
König, H.2
Sauter, M.3
Mueller-Lantzsch, N.4
Löwer, R.5
Löwer, J.6
-
31
-
-
0032705360
-
Antibody to human endogenous retrovirus peptide in urine of human immunodeficiency virus type 1-positive patients
-
Stevens RW, Baltch AL, Smith RP, McCreedy BJ, Michelsen PB, Bopp LH, et al. Antibody to human endogenous retrovirus peptide in urine of human immunodeficiency virus type 1-positive patients. Clin Diagn Lab Immunol (1999) 6:783-6.
-
(1999)
Clin Diagn Lab Immunol
, vol.6
, pp. 783-786
-
-
Stevens, R.W.1
Baltch, A.L.2
Smith, R.P.3
McCreedy, B.J.4
Michelsen, P.B.5
Bopp, L.H.6
-
32
-
-
33846252381
-
Detection of HERV-K(HML-2) viral RNA in plasma of HIV type 1-infected individuals
-
doi:10.1089/aid.2006.22.979
-
Contreras-Galindo R, Kaplan MH, Markovitz DM, Lorenzo E, Yamamura Y. Detection of HERV-K(HML-2) viral RNA in plasma of HIV type 1-infected individuals. AIDS Res Hum Retroviruses (2006) 22:979-84. doi:10.1089/aid.2006.22.979
-
(2006)
AIDS Res Hum Retroviruses
, vol.22
, pp. 979-984
-
-
Contreras-Galindo, R.1
Kaplan, M.H.2
Markovitz, D.M.3
Lorenzo, E.4
Yamamura, Y.5
-
33
-
-
37349065803
-
T cell responses to human endogenous retroviruses in HIV-1 infection
-
doi:10.1371/journal.ppat.0030165
-
Garrison KE, Jones RB, Meiklejohn DA, Anwar N, Ndhlovu LC, Chapman JM, et al. T cell responses to human endogenous retroviruses in HIV-1 infection. PLoS Pathog (2007) 3:e165. doi:10.1371/journal.ppat.0030165
-
(2007)
PLoS Pathog
, vol.3
-
-
Garrison, K.E.1
Jones, R.B.2
Meiklejohn, D.A.3
Anwar, N.4
Ndhlovu, L.C.5
Chapman, J.M.6
-
34
-
-
84855928953
-
Characterization of human endogenous retroviral elements in the blood of HIV-1-infected individuals
-
doi:10.1128/JVI.00602-11
-
Contreras-Galindo R, Kaplan MH, Contreras-Galindo AC, Gonzalez-Hernandez MJ, Ferlenghi I, Giusti F, et al. Characterization of human endogenous retroviral elements in the blood of HIV-1-infected individuals. J Virol (2012) 86:262-76. doi:10.1128/JVI.00602-11
-
(2012)
J Virol
, vol.86
, pp. 262-276
-
-
Contreras-Galindo, R.1
Kaplan, M.H.2
Contreras-Galindo, A.C.3
Gonzalez-Hernandez, M.J.4
Ferlenghi, I.5
Giusti, F.6
-
35
-
-
80053158287
-
Selective changes of retroelement expression in human prostate cancer
-
doi:10.1093/carcin/bgr181
-
Goering W, Ribarska T, Schulz WA. Selective changes of retroelement expression in human prostate cancer. Carcinogenesis (2011) 32:1484-92. doi:10.1093/carcin/bgr181
-
(2011)
Carcinogenesis
, vol.32
, pp. 1484-1492
-
-
Goering, W.1
Ribarska, T.2
Schulz, W.A.3
-
36
-
-
34347240368
-
Activation of endogenous retrovirus reverse transcriptase in multiple sclerosis patient lymphocytes by inactivated HSV-1, HHV-6 and VZV
-
doi:10.1016/j.jneuroim.2007.04.003
-
Brudek T, Lühdorf P, Christensen T, Hansen HJ, Møller-Larsen A. Activation of endogenous retrovirus reverse transcriptase in multiple sclerosis patient lymphocytes by inactivated HSV-1, HHV-6 and VZV. J Neuroimmunol (2007) 187:147-55. doi:10.1016/j.jneuroim.2007.04.003
-
(2007)
J Neuroimmunol
, vol.187
, pp. 147-155
-
-
Brudek, T.1
Lühdorf, P.2
Christensen, T.3
Hansen, H.J.4
Møller-Larsen, A.5
-
37
-
-
77952172555
-
A role for human endogenous retrovirus-K (HML-2) in rheumatoid arthritis: investigating mechanisms of pathogenesis
-
doi:10.1111/j.1365-2249.2010.04110.x
-
Freimanis G, Hooley P, Ejtehadi HD, Ali HA, Veitch A, Rylance PB, et al. A role for human endogenous retrovirus-K (HML-2) in rheumatoid arthritis: investigating mechanisms of pathogenesis. Clin Exp Immunol (2010) 160:340-7. doi:10.1111/j.1365-2249.2010.04110.x
-
(2010)
Clin Exp Immunol
, vol.160
, pp. 340-347
-
-
Freimanis, G.1
Hooley, P.2
Ejtehadi, H.D.3
Ali, H.A.4
Veitch, A.5
Rylance, P.B.6
-
38
-
-
50549099314
-
Expression patterns of transcribed human endogenous retrovirus HERV-K(HML-2) loci in human tissues and the need for a HERV Transcriptome Project
-
doi:10.1186/1471-2164-9-354
-
Flockerzi A, Ruggieri A, Frank O, Sauter M, Maldener E, Kopper B, et al. Expression patterns of transcribed human endogenous retrovirus HERV-K(HML-2) loci in human tissues and the need for a HERV Transcriptome Project. BMC Genomics (2008) 9:354. doi:10.1186/1471-2164-9-354
-
(2008)
BMC Genomics
, vol.9
, pp. 354
-
-
Flockerzi, A.1
Ruggieri, A.2
Frank, O.3
Sauter, M.4
Maldener, E.5
Kopper, B.6
-
39
-
-
53749108111
-
Human endogenous retrovirus family HERV-K(HML-2) RNA transcripts are selectively packaged into retroviral particles produced by the human germ cell tumor line Tera-1 and originate mainly from a provirus on chromosome 22q11.21
-
doi:10.1128/JVI.01016-08
-
Ruprecht K, Ferreira H, Flockerzi A, Wahl S, Sauter M, Mayer J, et al. Human endogenous retrovirus family HERV-K(HML-2) RNA transcripts are selectively packaged into retroviral particles produced by the human germ cell tumor line Tera-1 and originate mainly from a provirus on chromosome 22q11.21. J Virol (2008) 82:10008-16. doi:10.1128/JVI.01016-08
-
(2008)
J Virol
, vol.82
, pp. 10008-10016
-
-
Ruprecht, K.1
Ferreira, H.2
Flockerzi, A.3
Wahl, S.4
Sauter, M.5
Mayer, J.6
-
40
-
-
58149502605
-
A single amino acid substitution in a segment of the CA protein within Gag that has similarity to human immunodeficiency virus type 1 blocks infectivity of a human endogenous retrovirus K provirus in the human genome
-
doi:10.1128/JVI.01439-08
-
Heslin DJ, Murcia P, Arnaud F, van Doorslaer K, Palmarini M, Lenz J. A single amino acid substitution in a segment of the CA protein within Gag that has similarity to human immunodeficiency virus type 1 blocks infectivity of a human endogenous retrovirus K provirus in the human genome. J Virol (2009) 83:1105-14. doi:10.1128/JVI.01439-08
-
(2009)
J Virol
, vol.83
, pp. 1105-1114
-
-
Heslin, D.J.1
Murcia, P.2
Arnaud, F.3
van Doorslaer, K.4
Palmarini, M.5
Lenz, J.6
-
41
-
-
0034910214
-
Expression of human endogenous retrovirus k envelope transcripts in human breast cancer
-
Wang-Johanning F, Frost AR, Johanning GL, Khazaeli MB, LoBuglio AF, Shaw DR, et al. Expression of human endogenous retrovirus k envelope transcripts in human breast cancer. Clin Cancer Res (2001) 7:1553-60.
-
(2001)
Clin Cancer Res
, vol.7
, pp. 1553-1560
-
-
Wang-Johanning, F.1
Frost, A.R.2
Johanning, G.L.3
Khazaeli, M.B.4
LoBuglio, A.F.5
Shaw, D.R.6
-
42
-
-
33845986281
-
Only those genes of the KIAA1245 gene subfamily that contain HERV(K) LTRs in their introns are transcriptionally active
-
doi:10.1016/j.virol.2006.06.027
-
Illarionova AE, Vinogradova TV, Sverdlov ED. Only those genes of the KIAA1245 gene subfamily that contain HERV(K) LTRs in their introns are transcriptionally active. Virology (2007) 358:39-47. doi:10.1016/j.virol.2006.06.027
-
(2007)
Virology
, vol.358
, pp. 39-47
-
-
Illarionova, A.E.1
Vinogradova, T.V.2
Sverdlov, E.D.3
-
43
-
-
7544230404
-
Human endogenous retroviral elements belonging to the HERV-S family from human tissues, cancer cells, and primates: expression, structure, phylogeny and evolution
-
doi:10.1016/j.gene.2004.08.007
-
Yi J-M, Kim T-H, Huh J-W, Park KS, Jang S-B, Kim H-M, et al. Human endogenous retroviral elements belonging to the HERV-S family from human tissues, cancer cells, and primates: expression, structure, phylogeny and evolution. Gene (2004) 342:283-92. doi:10.1016/j.gene.2004.08.007
-
(2004)
Gene
, vol.342
, pp. 283-292
-
-
Yi, J.-M.1
Kim, T.-H.2
Huh, J.-W.3
Park, K.S.4
Jang, S.-B.5
Kim, H.-M.6
-
44
-
-
2942577721
-
Expression analysis of endogenous retroviral elements belonging to the HERV-F family from human tissues and cancer cells
-
doi:10.1016/j.canlet.2004.01.026
-
Yi J-M, Kim H-S. Expression analysis of endogenous retroviral elements belonging to the HERV-F family from human tissues and cancer cells. Cancer Lett (2004) 211:89-96. doi:10.1016/j.canlet.2004.01.026
-
(2004)
Cancer Lett
, vol.211
, pp. 89-96
-
-
Yi, J.-M.1
Kim, H.-S.2
-
45
-
-
0037663943
-
Detecting the expression of human endogenous retrovirus E envelope transcripts in human prostate adenocarcinoma
-
doi:10.1002/cncr.11451
-
Wang-Johanning F, Frost AR, Jian B, Azerou R, Lu DW, Chen D-T, et al. Detecting the expression of human endogenous retrovirus E envelope transcripts in human prostate adenocarcinoma. Cancer (2003) 98:187-97. doi:10.1002/cncr.11451
-
(2003)
Cancer
, vol.98
, pp. 187-197
-
-
Wang-Johanning, F.1
Frost, A.R.2
Jian, B.3
Azerou, R.4
Lu, D.W.5
Chen, D.-T.6
-
46
-
-
2942642114
-
Digital expression profiles of human endogenous retroviral families in normal and cancerous tissues
-
Stauffer Y, Theiler G, Sperisen P, Lebedev Y, Jongeneel CV. Digital expression profiles of human endogenous retroviral families in normal and cancerous tissues. Cancer Immun (2004) 4:2.
-
(2004)
Cancer Immun
, vol.4
, pp. 2
-
-
Stauffer, Y.1
Theiler, G.2
Sperisen, P.3
Lebedev, Y.4
Jongeneel, C.V.5
-
47
-
-
0347755531
-
The UCSC Table Browser data retrieval tool
-
doi:10.1093/nar/gkh103
-
Karolchik D, Hinrichs AS, Furey TS, Roskin KM, Sugnet CW, Haussler D, et al. The UCSC Table Browser data retrieval tool. Nucleic Acids Res (2004) 32:D493-6. doi:10.1093/nar/gkh103
-
(2004)
Nucleic Acids Res
, vol.32
-
-
Karolchik, D.1
Hinrichs, A.S.2
Furey, T.S.3
Roskin, K.M.4
Sugnet, C.W.5
Haussler, D.6
-
48
-
-
0036079158
-
The human genome browser at UCSC
-
doi:10.1101/gr.229102. Article published online before print in May 2002.
-
Kent WJ, Sugnet CW, Furey TS, Roskin KM, Pringle TH, Zahler AM, et al. The human genome browser at UCSC. Genome Res (2002) 12:996-1006. doi:10.1101/gr.229102. Article published online before print in May 2002.
-
(2002)
Genome Res
, vol.12
, pp. 996-1006
-
-
Kent, W.J.1
Sugnet, C.W.2
Furey, T.S.3
Roskin, K.M.4
Pringle, T.H.5
Zahler, A.M.6
-
50
-
-
0032103760
-
Repeats in genomic DNA: mining and meaning
-
doi:10.1016/S0959-440X(98)80067-5
-
Jurka J. Repeats in genomic DNA: mining and meaning. Curr Opin Struct Biol (1998) 8:333-7. doi:10.1016/S0959-440X(98)80067-5
-
(1998)
Curr Opin Struct Biol
, vol.8
, pp. 333-337
-
-
Jurka, J.1
-
51
-
-
0028988480
-
Identification of a Rev-related protein by analysis of spliced transcripts of the human endogenous retroviruses HTDV/HERV-K
-
Löwer R, Tönjes RR, Korbmacher C, Kurth R, Löwer J. Identification of a Rev-related protein by analysis of spliced transcripts of the human endogenous retroviruses HTDV/HERV-K. J Virol (1995) 69:141-9.
-
(1995)
J Virol
, vol.69
, pp. 141-149
-
-
Löwer, R.1
Tönjes, R.R.2
Korbmacher, C.3
Kurth, R.4
Löwer, J.5
-
52
-
-
84891045238
-
-
5th ed., New York: Garland Science.
-
Alberts B, Johnson A, Lewis J, Raff M, Roberts K, Walter P. Molecular Biology of the Cell. 5th ed. Vol. 6, New York: Garland Science (2008). p. 349-54.
-
(2008)
Molecular Biology of the Cell
, vol.6
, pp. 349-354
-
-
Alberts, B.1
Johnson, A.2
Lewis, J.3
Raff, M.4
Roberts, K.5
Walter, P.6
-
53
-
-
65249167467
-
Evolutionary conservation of orthoretroviral long terminal repeats (LTRs) and ab initio detection of single LTRs in genomic data
-
doi:10.1371/journal.pone.0005179
-
Benachenhou F, Jern P, Oja M, Sperber G, Blikstad V, Somervuo P, et al. Evolutionary conservation of orthoretroviral long terminal repeats (LTRs) and ab initio detection of single LTRs in genomic data. PLoS ONE (2009) 4:e5179. doi:10.1371/journal.pone.0005179
-
(2009)
PLoS ONE
, vol.4
-
-
Benachenhou, F.1
Jern, P.2
Oja, M.3
Sperber, G.4
Blikstad, V.5
Somervuo, P.6
-
54
-
-
2642539950
-
Tissue specificity of enhancer and promoter activities of a HERV-K(HML-2) LTR
-
doi:10.1016/j.virusres.2004.02.036
-
Ruda VM, Akopov SB, Trubetskoy DO, Manuylov NL, Vetchinova AS, Zavalova LL, et al. Tissue specificity of enhancer and promoter activities of a HERV-K(HML-2) LTR. Virus Res (2004) 104:11-6. doi:10.1016/j.virusres.2004.02.036
-
(2004)
Virus Res
, vol.104
, pp. 11-16
-
-
Ruda, V.M.1
Akopov, S.B.2
Trubetskoy, D.O.3
Manuylov, N.L.4
Vetchinova, A.S.5
Zavalova, L.L.6
-
55
-
-
0033180333
-
Endogenous retroviruses provide the primary polyadenylation signal for two new human genes (HHLA2 and HHLA3)
-
doi:10.1006/geno.1999.5877
-
Mager DL, Hunter DG, Schertzer M, Freeman JD. Endogenous retroviruses provide the primary polyadenylation signal for two new human genes (HHLA2 and HHLA3). Genomics (1999) 59:255-63. doi:10.1006/geno.1999.5877
-
(1999)
Genomics
, vol.59
, pp. 255-263
-
-
Mager, D.L.1
Hunter, D.G.2
Schertzer, M.3
Freeman, J.D.4
-
56
-
-
31144439046
-
Human endogenous retroviral elements as indicators of ectopic recombination events in the primate genome
-
doi:10.1534/genetics.105.043976
-
Hughes JF, Coffin JM. Human endogenous retroviral elements as indicators of ectopic recombination events in the primate genome. Genetics (2005) 171:1183-94. doi:10.1534/genetics.105.043976
-
(2005)
Genetics
, vol.171
, pp. 1183-1194
-
-
Hughes, J.F.1
Coffin, J.M.2
-
57
-
-
44349150377
-
Serological response to human endogenous retrovirus K in melanoma patients correlates with survival probability
-
doi:10.1089/aid.2007.0286
-
Hahn S, Ugurel S, Hanschmann K-M, Strobel H, Tondera C, Schadendorf D, et al. Serological response to human endogenous retrovirus K in melanoma patients correlates with survival probability. AIDS Res Hum Retroviruses (2008) 24:717-23. doi:10.1089/aid.2007.0286
-
(2008)
AIDS Res Hum Retroviruses
, vol.24
, pp. 717-723
-
-
Hahn, S.1
Ugurel, S.2
Hanschmann, K.-M.3
Strobel, H.4
Tondera, C.5
Schadendorf, D.6
-
58
-
-
32044461054
-
Detection of T lymphocytes specific for human endogenous retrovirus K (HERV-K) in patients with seminoma
-
doi:10.1089/aid.2006.22.52
-
Rakoff-Nahoum S, Kuebler PJ, Heymann JJ, Sheehy EM, Ortiz GM, Ogg SG, et al. Detection of T lymphocytes specific for human endogenous retrovirus K (HERV-K) in patients with seminoma. AIDS Res Hum Retroviruses (2006) 22:52-6. doi:10.1089/aid.2006.22.52
-
(2006)
AIDS Res Hum Retroviruses
, vol.22
, pp. 52-56
-
-
Rakoff-Nahoum, S.1
Kuebler, P.J.2
Heymann, J.J.3
Sheehy, E.M.4
Ortiz, G.M.5
Ogg, S.G.6
-
59
-
-
84863177511
-
Immunotherapeutic potential of anti-human endogenous retrovirus-K envelope protein antibodies in targeting breast tumors
-
doi:10.1093/jnci/djr540
-
Wang-Johanning F, Rycaj K, Plummer JB, Li M, Yin B, Frerich K, et al. Immunotherapeutic potential of anti-human endogenous retrovirus-K envelope protein antibodies in targeting breast tumors. J Natl Cancer Inst (2012) 104:189-210. doi:10.1093/jnci/djr540
-
(2012)
J Natl Cancer Inst
, vol.104
, pp. 189-210
-
-
Wang-Johanning, F.1
Rycaj, K.2
Plummer, J.B.3
Li, M.4
Yin, B.5
Frerich, K.6
-
60
-
-
84907095419
-
R: A Language and Environment for Statistical Computing
-
R Development Core Team.
-
R Development Core Team. R: A Language and Environment for Statistical Computing. R Foundation for Statistical Computing (2008). Available from: http://www.R-project.org
-
(2008)
R Foundation for Statistical Computing
-
-
-
61
-
-
25844449770
-
Galaxy: a platform for interactive large-scale genome analysis
-
doi:10.1101/gr.4086505
-
Giardine B, Riemer C, Hardison RC, Burhans R, Elnitski L, Shah P, et al. Galaxy: a platform for interactive large-scale genome analysis. Genome Res (2005) 15:1451-5. doi:10.1101/gr.4086505
-
(2005)
Genome Res
, vol.15
, pp. 1451-1455
-
-
Giardine, B.1
Riemer, C.2
Hardison, R.C.3
Burhans, R.4
Elnitski, L.5
Shah, P.6
-
62
-
-
0036226603
-
BLAT-the BLAST-like alignment tool
-
doi:10.1101/gr.229202. Article published online before March 2002
-
Kent WJ. BLAT-the BLAST-like alignment tool. Genome Res (2002) 12:656-64. doi:10.1101/gr.229202. Article published online before March 2002
-
(2002)
Genome Res
, vol.12
, pp. 656-664
-
-
Kent, W.J.1
|