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Volumn 19, Issue 12, 2013, Pages 5187-5198

Insight into the molecular mechanism about lowered dihydrofolate binding affinity to dihydrofolate reductase-like 1 (DHFRL1)

Author keywords

Dihydrofolate; Dihydrofolate reductase like 1; MM GBSA; Molecular dynamics simulation

Indexed keywords

DIHYDROFOLATE REDUCTASE; DIHYDROFOLATE REDUCTASE LIKE 1; DIHYDROFOLIC ACID; REDUCED NICOTINAMIDE ADENINE DINUCLEOTIDE PHOSPHATE; UNCLASSIFIED DRUG;

EID: 84890849411     PISSN: 16102940     EISSN: 09485023     Source Type: Journal    
DOI: 10.1007/s00894-013-2018-2     Document Type: Article
Times cited : (5)

References (52)
  • 1
    • 0019455232 scopus 로고
    • 2,4-Diamino-5-benzylpyrimidines and analogues as antibacterial agents. 5. 3',5'-Dimethoxy-4'-substituted-benzyl analogues of trimethoprim
    • 10.1021/jm00140a005 1:CAS:528:DyaL3MXksFGnu7s%3D
    • Roth B, Aig E, Rauckman BS, Strelitz JZ, Phillips AP, Ferone R, Bushby SR, Sigel CW (1981) 2,4-Diamino-5-benzylpyrimidines and analogues as antibacterial agents. 5. 3',5'-Dimethoxy-4'-substituted-benzyl analogues of trimethoprim. J Med Chem 24:933-941
    • (1981) J Med Chem , vol.24 , pp. 933-941
    • Roth, B.1    Aig, E.2    Rauckman, B.S.3    Strelitz, J.Z.4    Phillips, A.P.5    Ferone, R.6    Bushby, S.R.7    Sigel, C.W.8
  • 3
    • 1542283603 scopus 로고    scopus 로고
    • Sustained clinical efficacy of sulfadoxine-pyrimethamine for uncomplicated falciparum malaria in Malawi after 10 years as first line treatment: Five year prospective study
    • 10.1136/bmj.37977.653750.EE 1:CAS:528:DC%2BD2cXivF2ltbY%3D
    • Plowe CV, Kublin PG, Dzinjalamala FK, Kamwendo DS, Mukadam RAG, Chimpeni P, Molyneux ME, Taylor TE (2004) Sustained clinical efficacy of sulfadoxine-pyrimethamine for uncomplicated falciparum malaria in Malawi after 10 years as first line treatment: five year prospective study. Brit Med J 328:545-548
    • (2004) Brit Med J , vol.328 , pp. 545-548
    • Plowe, C.V.1    Kublin, P.G.2    Dzinjalamala, F.K.3    Kamwendo, D.S.4    Mukadam, R.A.G.5    Chimpeni, P.6    Molyneux, M.E.7    Taylor, T.E.8
  • 4
    • 0026619403 scopus 로고
    • Antifolates: The next generation
    • 1:CAS:528:DyaK3sXhtl2jsbg%3D
    • Fleming GF, Schilsky RL (1992) Antifolates: the next generation. Semin Oncol 19:707-719
    • (1992) Semin Oncol , vol.19 , pp. 707-719
    • Fleming, G.F.1    Schilsky, R.L.2
  • 5
    • 71749089415 scopus 로고    scopus 로고
    • Cancer research: From folate antagonism to molecular targets
    • 10.1016/j.beha.2009.09.004
    • Bertino JR (2009) Cancer research: from folate antagonism to molecular targets. Best Pract Res Clin Haematol 22:577-582
    • (2009) Best Pract Res Clin Haematol , vol.22 , pp. 577-582
    • Bertino, J.R.1
  • 6
    • 13844298790 scopus 로고    scopus 로고
    • Targeting DHFR in parasitic protozoa
    • 10.1016/S1359-6446(04)03308-2 1:CAS:528:DC%2BD2MXhsFarsbs%3D
    • Anderson AC (2005) Targeting DHFR in parasitic protozoa. Drug Discov Today 10:121-128
    • (2005) Drug Discov Today , vol.10 , pp. 121-128
    • Anderson, A.C.1
  • 7
    • 0018852667 scopus 로고
    • On the mechanism of action of folate- and biopterin-requiring enzymes
    • 10.1146/annurev.bi.49.070180.001303 1:CAS:528:DyaL3cXks1Cht7c%3D
    • Benkovic SJ (1980) On the mechanism of action of folate- and biopterin-requiring enzymes. Annu Rev Biochem 49:227-251
    • (1980) Annu Rev Biochem , vol.49 , pp. 227-251
    • Benkovic, S.J.1
  • 8
    • 0021332477 scopus 로고
    • Human dihydrofolate reductase gene is located in chromosome 5 and is unlinked to the related pseudogenes
    • 10.1073/pnas.81.5.1484 1:CAS:528:DyaL2cXhvVKls74%3D
    • Maurer BJ, Barker PE, Masters JN, Ruddle FH, Attardi G (1984) Human dihydrofolate reductase gene is located in chromosome 5 and is unlinked to the related pseudogenes. Proc Natl Acad Sci U S A 81:1484-1488
    • (1984) Proc Natl Acad Sci U S A , vol.81 , pp. 1484-1488
    • Maurer, B.J.1    Barker, P.E.2    Masters, J.N.3    Ruddle, F.H.4    Attardi, G.5
  • 9
    • 80053060915 scopus 로고    scopus 로고
    • The former annotated human pseudogene dihydrofolate reductase-like 1 (DHFRL1) is expressed and functional
    • 10.1073/pnas.1103605108 1:CAS:528:DC%2BC3MXht1GqtrfE
    • McEntee G, Minguzzi S, O'Brien K, Ben Larbi N, Loscher C, O'Fagain C, Parle-McDermott A (2011) The former annotated human pseudogene dihydrofolate reductase-like 1 (DHFRL1) is expressed and functional. Proc Natl Acad Sci U S A 108:15157-15162
    • (2011) Proc Natl Acad Sci U S A , vol.108 , pp. 15157-15162
    • McEntee, G.1    Minguzzi, S.2    O'Brien, K.3    Ben Larbi, N.4    Loscher, C.5    O'Fagain, C.6    Parle-Mcdermott, A.7
  • 10
    • 80053089625 scopus 로고    scopus 로고
    • Identification of a de novo thymidylate biosynthesis pathway in mammalian mitochondria
    • 10.1073/pnas.1103623108 1:CAS:528:DC%2BC3MXht1GqtrfF
    • Anderson DD, Quintero CM, Stover PJ (2011) Identification of a de novo thymidylate biosynthesis pathway in mammalian mitochondria. Proc Natl Acad Sci U S A 108:15163-15168
    • (2011) Proc Natl Acad Sci U S A , vol.108 , pp. 15163-15168
    • Anderson, D.D.1    Quintero, C.M.2    Stover, P.J.3
  • 11
    • 0028241517 scopus 로고
    • Methotrexate-resistant variants of human dihydrofolate reductase. Effects of Phe31 substitutions
    • 1:CAS:528:DyaK2cXktVert7g%3D
    • Chunduru SK, Cody V, Luft JR, Pangborn W, Appleman JR, Blakley RL (1994) Methotrexate-resistant variants of human dihydrofolate reductase. Effects of Phe31 substitutions. J Biol Chem 269:9547-9555
    • (1994) J Biol Chem , vol.269 , pp. 9547-9555
    • Chunduru, S.K.1    Cody, V.2    Luft, J.R.3    Pangborn, W.4    Appleman, J.R.5    Blakley, R.L.6
  • 12
    • 67749106478 scopus 로고    scopus 로고
    • Multiple conformers in active site of human dihydrofolate reductase F31R/Q35E double mutant suggest structural basis for methotrexate resistance
    • 10.1074/jbc.M109.018010 1:CAS:528:DC%2BD1MXos1ensrc%3D
    • Volpato JP, Yachnin BJ, Blanchet J, Guerrero V, Poulin L, Fossati E, Berghuis AM, Pelletier JN (2009) Multiple conformers in active site of human dihydrofolate reductase F31R/Q35E double mutant suggest structural basis for methotrexate resistance. J Biol Chem 284:20079-20089
    • (2009) J Biol Chem , vol.284 , pp. 20079-20089
    • Volpato, J.P.1    Yachnin, B.J.2    Blanchet, J.3    Guerrero, V.4    Poulin, L.5    Fossati, E.6    Berghuis, A.M.7    Pelletier, J.N.8
  • 13
    • 0028920025 scopus 로고
    • Methotrexate-resistant variants of human dihydrofolate reductase with substitutions of leucine 22. Kinetics, crystallography, and potential as selectable markers
    • 10.1074/jbc.270.10.5057 1:CAS:528:DyaK2MXksVSltr4%3D
    • Lewis WS, Cody V, Galitsky N, Luft JR, Pangborn W, Chunduru SK, Spencer HT, Appleman JR, Blakley RL (1995) Methotrexate-resistant variants of human dihydrofolate reductase with substitutions of leucine 22. Kinetics, crystallography, and potential as selectable markers. J Biol Chem 270:5057-5064
    • (1995) J Biol Chem , vol.270 , pp. 5057-5064
    • Lewis, W.S.1    Cody, V.2    Galitsky, N.3    Luft, J.R.4    Pangborn, W.5    Chunduru, S.K.6    Spencer, H.T.7    Appleman, J.R.8    Blakley, R.L.9
  • 14
    • 76249112547 scopus 로고    scopus 로고
    • Fast and accurate predictions of binding free energies using MM-PBSA and MM-GBSA
    • 1:CAS:528:DC%2BC3cXhtlenuro%3D
    • Rastelli G, Rio AD, Degliesposti G, Sgobba M (2010) Fast and accurate predictions of binding free energies using MM-PBSA and MM-GBSA. J Comput Chem 31:797-810
    • (2010) J Comput Chem , vol.31 , pp. 797-810
    • Rastelli, G.1    Rio, A.D.2    Degliesposti, G.3    Sgobba, M.4
  • 15
    • 0034351147 scopus 로고    scopus 로고
    • QM/MM and SCRF studies of the ionization state of 8-methylpterin substrate bound to dihydrofolate reductase: Existence of a low-barrier hydrogen bond
    • 10.1016/S1093-3263(00)00034-6 1:CAS:528:DC%2BD3cXktFShs78%3D
    • Cummins PL, Gready JE (2000) QM/MM and SCRF studies of the ionization state of 8-methylpterin substrate bound to dihydrofolate reductase: existence of a low-barrier hydrogen bond. J Mol Graph Model 18:42-49
    • (2000) J Mol Graph Model , vol.18 , pp. 42-49
    • Cummins, P.L.1    Gready, J.E.2
  • 18
    • 0031023843 scopus 로고    scopus 로고
    • Molecular dynamics simulations of the docking of substituted N5-deazapterins to dihydrofolate reductase
    • 10.1093/protein/10.1.23 1:CAS:528:DyaK2sXhsVersrk%3D
    • Gorse AD, Gready JE (1997) Molecular dynamics simulations of the docking of substituted N5-deazapterins to dihydrofolate reductase. Protein Eng 10:23-30
    • (1997) Protein Eng , vol.10 , pp. 23-30
    • Gorse, A.D.1    Gready, J.E.2
  • 19
    • 77949616435 scopus 로고    scopus 로고
    • Computational analysis of binding between malarial dihydrofolate reductases and anti-folates
    • 10.1186/1475-2875-9-65
    • Choowongkomon K, Theppabutr S, Songtawee N, Day N, White N, Woodrow C, Imwong M (2010) Computational analysis of binding between malarial dihydrofolate reductases and anti-folates. Malar J 9:65
    • (2010) Malar J , vol.9 , pp. 65
    • Choowongkomon, K.1    Theppabutr, S.2    Songtawee, N.3    Day, N.4    White, N.5    Woodrow, C.6    Imwong, M.7
  • 20
    • 84875675509 scopus 로고    scopus 로고
    • Connecting protein conformational dynamics with catalytic function as illustrated in dihydrofolate reductase
    • 10.1021/bi301559q 1:CAS:528:DC%2BC3sXkt1ymuw%3D%3D
    • Fan Y, Cembran A, Ma S, Gao J (2013) Connecting protein conformational dynamics with catalytic function as illustrated in dihydrofolate reductase. Biochemistry 52:2036-2049
    • (2013) Biochemistry , vol.52 , pp. 2036-2049
    • Fan, Y.1    Cembran, A.2    Ma, S.3    Gao, J.4
  • 21
    • 3042660150 scopus 로고    scopus 로고
    • Structure, dynamics, and catalytic function of dihydrofolate reductase
    • 10.1146/annurev.biophys.33.110502.133613 1:CAS:528:DC%2BD2cXltlKktro%3D
    • Schnell JR, Dyson HJ, Wright PE (2004) Structure, dynamics, and catalytic function of dihydrofolate reductase. Annu Rev Biophys Biomol Struct 33:119-140
    • (2004) Annu Rev Biophys Biomol Struct , vol.33 , pp. 119-140
    • Schnell, J.R.1    Dyson, H.J.2    Wright, P.E.3
  • 22
    • 1842531419 scopus 로고    scopus 로고
    • Pivotal role of Gly 121 in dihydrofolate reductase from Escherichia coli: The altered structure of a mutant enzyme may form the basis of its diminished catalytic performance
    • 10.1021/bi036164k 1:CAS:528:DC%2BD2cXitVOqtr0%3D
    • Swanwick RS, Shrimpton PJ, Allemann RK (2004) Pivotal role of Gly 121 in dihydrofolate reductase from Escherichia coli: the altered structure of a mutant enzyme may form the basis of its diminished catalytic performance. Biochemistry 43:4119-4127
    • (2004) Biochemistry , vol.43 , pp. 4119-4127
    • Swanwick, R.S.1    Shrimpton, P.J.2    Allemann, R.K.3
  • 23
    • 0025805956 scopus 로고
    • Role of the conserved active site residue tryptophan-24 of human dihydrofolate reductase as revealed by mutagenesis
    • 10.1021/bi00219a038 1:CAS:528:DyaK3MXlvVWjsg%3D%3D
    • Beard WA, Appleman JR, Huang S, Delcamp TJ, Freisheim JH, Blakley RL (1991) Role of the conserved active site residue tryptophan-24 of human dihydrofolate reductase as revealed by mutagenesis. Biochemistry 30:1432-1440
    • (1991) Biochemistry , vol.30 , pp. 1432-1440
    • Beard, W.A.1    Appleman, J.R.2    Huang, S.3    Delcamp, T.J.4    Freisheim, J.H.5    Blakley, R.L.6
  • 24
    • 0024239622 scopus 로고
    • Site-directed mutagenesis of mouse dihydrofolate reductase. Mutants with increased resistance to methotrexate and trimethoprim
    • 1:CAS:528:DyaL1cXmtVOntrc%3D
    • Thillet J, Absil J, Stone SR, Pictet R (1988) Site-directed mutagenesis of mouse dihydrofolate reductase. Mutants with increased resistance to methotrexate and trimethoprim. J Biol Chem 263:12500-12508
    • (1988) J Biol Chem , vol.263 , pp. 12500-12508
    • Thillet, J.1    Absil, J.2    Stone, S.R.3    Pictet, R.4
  • 25
    • 0034602373 scopus 로고    scopus 로고
    • Free energy calculations on dimer stability of the HIV protease using molecular dynamics and a continuum solvent model
    • 10.1006/jmbi.2000.4057 1:CAS:528:DC%2BD3cXotlyit7k%3D
    • Wang W, Kollman PA (2000) Free energy calculations on dimer stability of the HIV protease using molecular dynamics and a continuum solvent model. J Mol Biol 303:567-582
    • (2000) J Mol Biol , vol.303 , pp. 567-582
    • Wang, W.1    Kollman, P.A.2
  • 26
    • 84961980685 scopus 로고    scopus 로고
    • Binding of a diverse set of ligands to Avidin and Streptavidin: An accurate quantitative prediction of their relative affinities by a combination of molecular mechanics and continuum solvent models
    • 10.1021/jm000241h 1:CAS:528:DC%2BD3cXmt1Kns7w%3D
    • Kuhn B, Kollman PA (2000) Binding of a diverse set of ligands to Avidin and Streptavidin: an accurate quantitative prediction of their relative affinities by a combination of molecular mechanics and continuum solvent models. J Med Chem 43:3786-3791
    • (2000) J Med Chem , vol.43 , pp. 3786-3791
    • Kuhn, B.1    Kollman, P.A.2
  • 27
    • 0037208314 scopus 로고    scopus 로고
    • Mapping the binding site of a large set of quinazoline type EGF-R inhibitors using molecular field analyses and molecular docking studies
    • Hou T, Zhu L, Chen L, Xu X (2002) Mapping the binding site of a large set of quinazoline type EGF-R inhibitors using molecular field analyses and molecular docking studies. J Chem Inf Comput Sci 43:273-287
    • (2002) J Chem Inf Comput Sci , vol.43 , pp. 273-287
    • Hou, T.1    Zhu, L.2    Chen, L.3    Xu, X.4
  • 28
    • 0347602124 scopus 로고    scopus 로고
    • Converging free energy estimates: MM-PB(GB)SA studies on the protein-protein complex Ras-Raf
    • 10.1002/jcc.10379 1:CAS:528:DC%2BD2cXhtVKjuw%3D%3D
    • Gohlke H, Case DA (2004) Converging free energy estimates: MM-PB(GB)SA studies on the protein-protein complex Ras-Raf. J Comput Chem 25:238-250
    • (2004) J Comput Chem , vol.25 , pp. 238-250
    • Gohlke, H.1    Case, D.A.2
  • 29
    • 39049111013 scopus 로고    scopus 로고
    • Characterization of domain-peptide interaction interface: A case study on the amphiphysin-1 SH3 domain
    • 10.1016/j.jmb.2007.12.054 1:CAS:528:DC%2BD1cXhsleju7Y%3D
    • Hou T, Zhang W, Case DA, Wang W (2008) Characterization of domain-peptide interaction interface: a case study on the amphiphysin-1 SH3 domain. J Mol Biol 376:1201-1214
    • (2008) J Mol Biol , vol.376 , pp. 1201-1214
    • Hou, T.1    Zhang, W.2    Case, D.A.3    Wang, W.4
  • 34
    • 2942532422 scopus 로고    scopus 로고
    • Development and testing of a general amber force field
    • 10.1002/jcc.20035 1:CAS:528:DC%2BD2cXksFakurc%3D
    • Wang J, Wolf RM, Caldwell JW, Kollman PA, Case DA (2004) Development and testing of a general amber force field. J Comput Chem 25:1157-1174
    • (2004) J Comput Chem , vol.25 , pp. 1157-1174
    • Wang, J.1    Wolf, R.M.2    Caldwell, J.W.3    Kollman, P.A.4    Case, D.A.5
  • 36
    • 3042524904 scopus 로고
    • A well-behaved electrostatic potential based method using charge restraints for deriving atomic charges: The RESP model
    • 10.1021/j100142a004 1:CAS:528:DyaK3sXlvVyqsLs%3D
    • Bayly CI, Cieplak P, Cornell W, Kollman PA (1993) A well-behaved electrostatic potential based method using charge restraints for deriving atomic charges: the RESP model. J Phys Chem 97:10269-10280
    • (1993) J Phys Chem , vol.97 , pp. 10269-10280
    • Bayly, C.I.1    Cieplak, P.2    Cornell, W.3    Kollman, P.A.4
  • 37
    • 33748538349 scopus 로고    scopus 로고
    • Automatic atom type and bond type perception in molecular mechanical calculations
    • 10.1016/j.jmgm.2005.12.005
    • Wang J, Wang W, Kollman PA, Case DA (2006) Automatic atom type and bond type perception in molecular mechanical calculations. J Mol Graph Model 25:247-260
    • (2006) J Mol Graph Model , vol.25 , pp. 247-260
    • Wang, J.1    Wang, W.2    Kollman, P.A.3    Case, D.A.4
  • 38
    • 0008796956 scopus 로고
    • Molecular dynamics/free energy perturbation study on the relative affinities of the binding of reduced and oxidized NADP to dihydrofolate reductase
    • 10.1021/ja00022a008 1:CAS:528:DyaK3MXmt1Krtr4%3D
    • Cummins PL, Ramnarayan K, Singh UC, Gready JE (1991) Molecular dynamics/free energy perturbation study on the relative affinities of the binding of reduced and oxidized NADP to dihydrofolate reductase. J Am Chem Soc 113:8247-8256
    • (1991) J Am Chem Soc , vol.113 , pp. 8247-8256
    • Cummins, P.L.1    Ramnarayan, K.2    Singh, U.C.3    Gready, J.E.4
  • 39
    • 0004016501 scopus 로고
    • Comparison of simple potential functions for simulating liquid water
    • 10.1063/1.445869 1:CAS:528:DyaL3sXksF2htL4%3D
    • Jorgensen WL, Chandrasekhar J, Madura JD, Impey RW, Klein ML (1983) Comparison of simple potential functions for simulating liquid water. J Chem Phys 79:926-935
    • (1983) J Chem Phys , vol.79 , pp. 926-935
    • Jorgensen, W.L.1    Chandrasekhar, J.2    Madura, J.D.3    Impey, R.W.4    Klein, M.L.5
  • 40
    • 33646940952 scopus 로고
    • Numerical integration of the cartesian equations of motion of a system with constraints: Molecular dynamics of n-alkanes
    • 10.1016/0021-9991(77)90098-5 1:CAS:528:DyaE2sXktVGhsL4%3D
    • Ryckaert J-P, Ciccotti G, Berendsen HJC (1977) Numerical integration of the cartesian equations of motion of a system with constraints: molecular dynamics of n-alkanes. J Comput Phys 23:327-341
    • (1977) J Comput Phys , vol.23 , pp. 327-341
    • Ryckaert, J.-P.1    Ciccotti, G.2    Berendsen, H.J.C.3
  • 42
    • 33748637571 scopus 로고    scopus 로고
    • Recent advances in free energy calculations with a combination of molecular mechanics and continuum models
    • 10.2174/157340906778226454 1:CAS:528:DC%2BD28Xos1GqtLs%3D
    • Wang J, Hou T, Xu X (2006) Recent advances in free energy calculations with a combination of molecular mechanics and continuum models. Curr Comput Aided Drug Des 2:287-306
    • (2006) Curr Comput Aided Drug des , vol.2 , pp. 287-306
    • Wang, J.1    Hou, T.2    Xu, X.3
  • 44
    • 1842479952 scopus 로고    scopus 로고
    • Exploring protein native states and large-scale conformational changes with a modified generalized born model
    • 10.1002/prot.20033 1:CAS:528:DC%2BD2cXjtFKhs78%3D
    • Onufriev A, Bashford D, Case DA (2004) Exploring protein native states and large-scale conformational changes with a modified generalized born model. Proteins 55:383-394
    • (2004) Proteins , vol.55 , pp. 383-394
    • Onufriev, A.1    Bashford, D.2    Case, D.A.3
  • 45
    • 0000408363 scopus 로고    scopus 로고
    • Approximate atomic surfaces from linear combinations of pairwise overlaps (LCPO)
    • 10.1002/(SICI)1096-987X(19990130)20:2<217: AID-JCC4>3.0.CO;2-A 1:CAS:528:DyaK1MXltVCltQ%3D%3D
    • Weiser J, Shenkin PS, Still WC (1999) Approximate atomic surfaces from linear combinations of pairwise overlaps (LCPO). J Comput Chem 20:217-230
    • (1999) J Comput Chem , vol.20 , pp. 217-230
    • Weiser, J.1    Shenkin, P.S.2    Still, W.C.3
  • 46
    • 79952588669 scopus 로고    scopus 로고
    • Assessing the performance of the MM/PBSA and MM/GBSA methods. 1. The accuracy of binding free energy calculations based on molecular dynamics simulations
    • 10.1021/ci100275a
    • Hou T, Wang J, Li Y, Wang W (2010) Assessing the performance of the MM/PBSA and MM/GBSA methods. 1. The accuracy of binding free energy calculations based on molecular dynamics simulations. J Chem Inf Model 51:69-82
    • (2010) J Chem Inf Model , vol.51 , pp. 69-82
    • Hou, T.1    Wang, J.2    Li, Y.3    Wang, W.4
  • 47
    • 77953159146 scopus 로고    scopus 로고
    • Cooperativity and specificity of Cys2His2 zinc finger protein-DNA interactions: A molecular dynamics simulation study
    • 10.1021/jp1017289 1:CAS:528:DC%2BC3cXmtVymt78%3D
    • Lee J, Kim J-S, Seok C (2010) Cooperativity and specificity of Cys2His2 zinc finger protein-DNA interactions: a molecular dynamics simulation study. J Phys Chem B 114:7662-7671
    • (2010) J Phys Chem B , vol.114 , pp. 7662-7671
    • Lee, J.1    Kim, J.-S.2    Seok, C.3
  • 48
    • 0043245780 scopus 로고    scopus 로고
    • Insights into protein-protein binding by binding free energy calculation and free energy decomposition for the Ras-Raf and Ras-RalGDS complexes
    • 10.1016/S0022-2836(03)00610-7 1:CAS:528:DC%2BD3sXlt1aqtbs%3D
    • Gohlke H, Kiel C, Case DA (2003) Insights into protein-protein binding by binding free energy calculation and free energy decomposition for the Ras-Raf and Ras-RalGDS complexes. J Mol Biol 330:891-913
    • (2003) J Mol Biol , vol.330 , pp. 891-913
    • Gohlke, H.1    Kiel, C.2    Case, D.A.3
  • 49
    • 77951203645 scopus 로고    scopus 로고
    • Design, synthesis, biological evaluation and computational investigation of novel inhibitors of dihydrofolate reductase of opportunistic pathogens
    • 10.1016/j.bmc.2010.03.031 1:CAS:528:DC%2BC3cXlsFCktbs%3D
    • Bag S, Tawari NR, Degani MS, Queener SF (2010) Design, synthesis, biological evaluation and computational investigation of novel inhibitors of dihydrofolate reductase of opportunistic pathogens. Bioorg Med Chem 18:3187-3197
    • (2010) Bioorg Med Chem , vol.18 , pp. 3187-3197
    • Bag, S.1    Tawari, N.R.2    Degani, M.S.3    Queener, S.F.4
  • 50
    • 0031015737 scopus 로고    scopus 로고
    • Loop and subdomain movements in the mechanism of Escherichia coli dihydrofolate reductase: Crystallographic evidence
    • 10.1021/bi962337c 1:CAS:528:DyaK2sXmtVymsA%3D%3D
    • Sawaya MR, Kraut J (1997) Loop and subdomain movements in the mechanism of Escherichia coli dihydrofolate reductase: crystallographic evidence. Biochemistry 36:586-603
    • (1997) Biochemistry , vol.36 , pp. 586-603
    • Sawaya, M.R.1    Kraut, J.2
  • 51
    • 0025037428 scopus 로고
    • Crystal structures of recombinant human dihydrofolate reductase complexed with folate and 5-deazafolate
    • 10.1021/bi00492a021 1:CAS:528:DyaK3cXlsVOqtLk%3D
    • Davies JF, Delcamp TJ, Prendergast NJ, Ashford VA, Freisheim JH, Kraut J (1990) Crystal structures of recombinant human dihydrofolate reductase complexed with folate and 5-deazafolate. Biochemistry 29:9467-9479
    • (1990) Biochemistry , vol.29 , pp. 9467-9479
    • Davies, J.F.1    Delcamp, T.J.2    Prendergast, N.J.3    Ashford, V.A.4    Freisheim, J.H.5    Kraut, J.6
  • 52
    • 0023931977 scopus 로고
    • Crystal structure of human dihydrofolate reductase complexed with folate
    • 10.1111/j.1432-1033.1988.tb14108.x 1:CAS:528:DyaL1cXktlCnsLs%3D
    • Oefner C, D'Arcy A, Winkler FK (1988) Crystal structure of human dihydrofolate reductase complexed with folate. Eur J Biochem 174:377-385
    • (1988) Eur J Biochem , vol.174 , pp. 377-385
    • Oefner, C.1    D'Arcy, A.2    Winkler, F.K.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.