메뉴 건너뛰기




Volumn 14, Issue 1, 2013, Pages

Microbial genomic taxonomy

Author keywords

Evolution; Genomics; Microbes; Taxonomy

Indexed keywords

AMINO ACID; NUCLEOTIDE; RNA 16S;

EID: 84890630720     PISSN: None     EISSN: 14712164     Source Type: Journal    
DOI: 10.1186/1471-2164-14-913     Document Type: Note
Times cited : (283)

References (75)
  • 3
    • 0014868747 scopus 로고
    • Polyphasic taxonomy of the genus vibrio: numerical taxonomy of Vibrio cholerae, Vibrio parahaemolyticus, and related Vibrio species
    • 248227, 5473901
    • Colwell RR. Polyphasic taxonomy of the genus vibrio: numerical taxonomy of Vibrio cholerae, Vibrio parahaemolyticus, and related Vibrio species. J Bacteriol 1970, 104:410-433. 248227, 5473901.
    • (1970) J Bacteriol , vol.104 , pp. 410-433
    • Colwell, R.R.1
  • 4
    • 0029942146 scopus 로고    scopus 로고
    • Polyphasic taxonomy, a consensus approach to bacterial systematics
    • 239450, 8801440
    • Vandamme P, Pot B, Gillis M, de Vos P, Kersters K, Swings J. Polyphasic taxonomy, a consensus approach to bacterial systematics. Microbiol Rev 1996, 60:407-438. 239450, 8801440.
    • (1996) Microbiol Rev , vol.60 , pp. 407-438
    • Vandamme, P.1    Pot, B.2    Gillis, M.3    de Vos, P.4    Kersters, K.5    Swings, J.6
  • 6
    • 33947302827 scopus 로고    scopus 로고
    • Taxonomic parameters revisited: tarnished gold standards
    • Stackebrandt E, Ebers J. Taxonomic parameters revisited: tarnished gold standards. Microbiol Today 2006, 33:152-155.
    • (2006) Microbiol Today , vol.33 , pp. 152-155
    • Stackebrandt, E.1    Ebers, J.2
  • 10
    • 79961183224 scopus 로고    scopus 로고
    • Metagenomic analysis of bacterial infections by means of high-throughput DNA sequencing
    • Nakamura S, Nakaya T, Iida T. Metagenomic analysis of bacterial infections by means of high-throughput DNA sequencing. Exp Biol Medi (Maywood, NJ) 2011, 236:968-971.
    • (2011) Exp Biol Medi (Maywood, NJ) , vol.236 , pp. 968-971
    • Nakamura, S.1    Nakaya, T.2    Iida, T.3
  • 12
    • 80053566742 scopus 로고    scopus 로고
    • The genus Listonella MacDonell and Colwell 1986 is a later heterotypic synonym of the genus Vibrio Pacini 1854 (Approved Lists 1980)-a taxonomic opinion
    • 3352160, 21296930
    • Thompson FL, Thompson CC, Dias GM, Naka H, Dubay C, Crosa JH. The genus Listonella MacDonell and Colwell 1986 is a later heterotypic synonym of the genus Vibrio Pacini 1854 (Approved Lists 1980)-a taxonomic opinion. Int J Syst Evol Microbiol 2011, 61(Pt 12):3023-3027. 3352160, 21296930.
    • (2011) Int J Syst Evol Microbiol , vol.61 , Issue.PART 12 , pp. 3023-3027
    • Thompson, F.L.1    Thompson, C.C.2    Dias, G.M.3    Naka, H.4    Dubay, C.5    Crosa, J.H.6
  • 13
    • 80053576890 scopus 로고    scopus 로고
    • Towards a genome based taxonomy of Mycoplasmas
    • 10.1016/j.meegid.2011.07.020, 21840423
    • Thompson CC, Vieira NM, Vicente A, Thompson F. Towards a genome based taxonomy of Mycoplasmas. Infect Genet Evol 2011, 11:1798-1804. 10.1016/j.meegid.2011.07.020, 21840423.
    • (2011) Infect Genet Evol , vol.11 , pp. 1798-1804
    • Thompson, C.C.1    Vieira, N.M.2    Vicente, A.3    Thompson, F.4
  • 17
    • 84876334475 scopus 로고    scopus 로고
    • Seeing the Tree of Life behind the phylogenetic forest
    • 10.1186/1741-7007-11-46, 3626908, 23587361
    • Puigbò P, Wolf YI, Koonin EV. Seeing the Tree of Life behind the phylogenetic forest. BMC Biol 2013, 11:46. 10.1186/1741-7007-11-46, 3626908, 23587361.
    • (2013) BMC Biol , vol.11 , pp. 46
    • Puigbò, P.1    Wolf, Y.I.2    Koonin, E.V.3
  • 18
    • 22144486947 scopus 로고    scopus 로고
    • Fuzzy species among recombinogenic bacteria
    • 10.1186/1741-7007-3-6, 554772, 15752428
    • Hanage WP, Fraser C, Spratt BG. Fuzzy species among recombinogenic bacteria. BMC Biol 2005, 3:6. 10.1186/1741-7007-3-6, 554772, 15752428.
    • (2005) BMC Biol , vol.3 , pp. 6
    • Hanage, W.P.1    Fraser, C.2    Spratt, B.G.3
  • 19
    • 0029060923 scopus 로고
    • Dinucleotide relative abundance extremes: a genomic signature
    • 10.1016/S0168-9525(00)89076-9, 7482779
    • Karlin S, Burge C. Dinucleotide relative abundance extremes: a genomic signature. Trends Genet 1995, 11:283-290. 10.1016/S0168-9525(00)89076-9, 7482779.
    • (1995) Trends Genet , vol.11 , pp. 283-290
    • Karlin, S.1    Burge, C.2
  • 20
    • 1842332701 scopus 로고    scopus 로고
    • Compositional biases of bacterial genomes and evolutionary implications
    • 179198, 9190805
    • Karlin S, Mrázek J, Campbell AM. Compositional biases of bacterial genomes and evolutionary implications. J Bacteriol 1997, 179:3899-3913. 179198, 9190805.
    • (1997) J Bacteriol , vol.179 , pp. 3899-3913
    • Karlin, S.1    Mrázek, J.2    Campbell, A.M.3
  • 21
    • 0032173634 scopus 로고    scopus 로고
    • Global dinucleotide signatures and analysis of genomic heterogeneity
    • Karlin S. Global dinucleotide signatures and analysis of genomic heterogeneity. Curr Opinion Microbiol 1998, 1:598-610.
    • (1998) Curr Opinion Microbiol , vol.1 , pp. 598-610
    • Karlin, S.1
  • 22
    • 2642588849 scopus 로고    scopus 로고
    • A genomic perspective on the relationship between the Aquificales and the epsilon-Proteobacteria
    • 10.1078/0723-2020-00272, 15214637
    • Coenye T, Vandamme P. A genomic perspective on the relationship between the Aquificales and the epsilon-Proteobacteria. Syst Appl Microbiol 2004, 27:313-322. 10.1078/0723-2020-00272, 15214637.
    • (2004) Syst Appl Microbiol , vol.27 , pp. 313-322
    • Coenye, T.1    Vandamme, P.2
  • 23
    • 33750300550 scopus 로고    scopus 로고
    • The reach of the genome signature in prokaryotes
    • 10.1186/1471-2148-6-84, 1621082, 17040564
    • Van Passel MWJ, Kuramae EE, Luyf ACM, Bart A, Boekhout T. The reach of the genome signature in prokaryotes. BMC Evol Biol 2006, 6:84. 10.1186/1471-2148-6-84, 1621082, 17040564.
    • (2006) BMC Evol Biol , vol.6 , pp. 84
    • Van Passel, M.W.J.1    Kuramae, E.E.2    Luyf, A.C.M.3    Bart, A.4    Boekhout, T.5
  • 24
    • 70449717295 scopus 로고    scopus 로고
    • Analysis of genomic signatures in prokaryotes using multinomial regression and hierarchical clustering
    • 10.1186/1471-2164-10-487, 2770534, 19845945
    • Bohlin J, Skjerve E, Ussery DW. Analysis of genomic signatures in prokaryotes using multinomial regression and hierarchical clustering. BMC Genomics 2009, 10:487. 10.1186/1471-2164-10-487, 2770534, 19845945.
    • (2009) BMC Genomics , vol.10 , pp. 487
    • Bohlin, J.1    Skjerve, E.2    Ussery, D.W.3
  • 25
    • 77954009908 scopus 로고    scopus 로고
    • Examination of genome homogeneity in prokaryotes using genomic signatures
    • 10.1371/journal.pone.0008113, 2781299, 19956556
    • Bohlin J, Skjerve E. Examination of genome homogeneity in prokaryotes using genomic signatures. PloS One 2009, 4:e8113. 10.1371/journal.pone.0008113, 2781299, 19956556.
    • (2009) PloS One , vol.4
    • Bohlin, J.1    Skjerve, E.2
  • 27
    • 67649911268 scopus 로고    scopus 로고
    • Metagenomic signatures of 86 microbial and viral metagenomes
    • 10.1111/j.1462-2920.2009.01901.x, 19302541
    • Willner D, Thurber RV, Rohwer F. Metagenomic signatures of 86 microbial and viral metagenomes. Environ Microbiol 2009, 11:1752-1766. 10.1111/j.1462-2920.2009.01901.x, 19302541.
    • (2009) Environ Microbiol , vol.11 , pp. 1752-1766
    • Willner, D.1    Thurber, R.V.2    Rohwer, F.3
  • 28
    • 65349189672 scopus 로고    scopus 로고
    • Phylogenetic signals in DNA composition: limitations and prospects
    • 10.1093/molbev/msp032, 19233962
    • Mrázek J. Phylogenetic signals in DNA composition: limitations and prospects. Mol Biol Evol 2009, 26:1163-1169. 10.1093/molbev/msp032, 19233962.
    • (2009) Mol Biol Evol , vol.26 , pp. 1163-1169
    • Mrázek, J.1
  • 29
    • 0034942865 scopus 로고    scopus 로고
    • Universal trees based on large combined protein sequence data sets
    • 10.1038/90129, 11431701
    • Brown JR, Douady CJ, Italia MJ, Marshall WE, Stanhope MJ. Universal trees based on large combined protein sequence data sets. Nature Genet 2001, 28:281-285. 10.1038/90129, 11431701.
    • (2001) Nature Genet , vol.28 , pp. 281-285
    • Brown, J.R.1    Douady, C.J.2    Italia, M.J.3    Marshall, W.E.4    Stanhope, M.J.5
  • 30
    • 0035749071 scopus 로고    scopus 로고
    • Bacterial molecular phylogeny using supertree approach
    • Daubin V, Gouy M, Perrière G. Bacterial molecular phylogeny using supertree approach. Genome Inform 2001, 12:155-164.
    • (2001) Genome Inform , vol.12 , pp. 155-164
    • Daubin, V.1    Gouy, M.2    Perrière, G.3
  • 31
    • 0036719929 scopus 로고    scopus 로고
    • Genome trees and the tree of life
    • 10.1016/S0168-9525(02)02744-0, 12175808
    • Wolf YI, Rogozin IB, Grishin NV, Koonin EV. Genome trees and the tree of life. Trends Genet 2002, 18:472-479. 10.1016/S0168-9525(02)02744-0, 12175808.
    • (2002) Trends Genet , vol.18 , pp. 472-479
    • Wolf, Y.I.1    Rogozin, I.B.2    Grishin, N.V.3    Koonin, E.V.4
  • 32
    • 0036330981 scopus 로고    scopus 로고
    • The phage proteomic tree: a genome-based taxonomy for phage
    • 10.1128/JB.184.16.4529-4535.2002, 135240, 12142423
    • Rohwer F, Edwards R. The phage proteomic tree: a genome-based taxonomy for phage. J Bacteriol 2002, 184:4529-4535. 10.1128/JB.184.16.4529-4535.2002, 135240, 12142423.
    • (2002) J Bacteriol , vol.184 , pp. 4529-4535
    • Rohwer, F.1    Edwards, R.2
  • 33
    • 0035007418 scopus 로고    scopus 로고
    • Frequency of morphological phage descriptions in the year 2000
    • 10.1007/s007050170120, 11448025
    • Ackermann HW. Frequency of morphological phage descriptions in the year 2000. Arch Virol 2001, 146:843-857. 10.1007/s007050170120, 11448025.
    • (2001) Arch Virol , vol.146 , pp. 843-857
    • Ackermann, H.W.1
  • 34
    • 0030801002 scopus 로고    scopus 로고
    • Gapped BLAST and PSI-BLAST: a new generation of protein database search programs
    • 10.1093/nar/25.17.3389, 146917, 9254694
    • Altschul SF, Madden TL, Schäffer AA, Zhang J, Zhang Z, Miller W, Lipman DJ. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res 1997, 25:3389-3402. 10.1093/nar/25.17.3389, 146917, 9254694.
    • (1997) Nucleic Acids Res , vol.25 , pp. 3389-3402
    • Altschul, S.F.1    Madden, T.L.2    Schäffer, A.A.3    Zhang, J.4    Zhang, Z.5    Miller, W.6    Lipman, D.J.7
  • 35
    • 14044262978 scopus 로고    scopus 로고
    • Genomic insights that advance the species definition for prokaryotes
    • Konstantinidis KT, Tiedje JM. Genomic insights that advance the species definition for prokaryotes. Sciences-New York 2005, 102:2567-2572.
    • (2005) Sciences-New York , vol.102 , pp. 2567-2572
    • Konstantinidis, K.T.1    Tiedje, J.M.2
  • 36
    • 24944587193 scopus 로고    scopus 로고
    • Towards a genome-based taxonomy for prokaryotes
    • 10.1128/JB.187.18.6258-6264.2005, 1236649, 16159757
    • Konstantinidis KT, Tiedje JM. Towards a genome-based taxonomy for prokaryotes. J Bacteriol 2005, 187:6258-6264. 10.1128/JB.187.18.6258-6264.2005, 1236649, 16159757.
    • (2005) J Bacteriol , vol.187 , pp. 6258-6264
    • Konstantinidis, K.T.1    Tiedje, J.M.2
  • 37
    • 33750998520 scopus 로고    scopus 로고
    • Toward a more robust assessment of intraspecies diversity, using fewer genetic markers
    • 10.1128/AEM.01398-06, 1636164, 16980418
    • Konstantinidis KT, Ramette A, Tiedje JM. Toward a more robust assessment of intraspecies diversity, using fewer genetic markers. Appl Environ Microbiol 2006, 72:7286-7293. 10.1128/AEM.01398-06, 1636164, 16980418.
    • (2006) Appl Environ Microbiol , vol.72 , pp. 7286-7293
    • Konstantinidis, K.T.1    Ramette, A.2    Tiedje, J.M.3
  • 39
    • 73149098333 scopus 로고    scopus 로고
    • Shifting the genomic gold standard for the prokaryotic species definition
    • 10.1073/pnas.0906412106, 2776425, 19855009
    • Richter M, Rosselló-Móra R. Shifting the genomic gold standard for the prokaryotic species definition. Proc Nat Acad Sci USA 2009, 106:19126-19131. 10.1073/pnas.0906412106, 2776425, 19855009.
    • (2009) Proc Nat Acad Sci USA , vol.106 , pp. 19126-19131
    • Richter, M.1    Rosselló-Móra, R.2
  • 41
    • 77952891913 scopus 로고    scopus 로고
    • Digital DNA-DNA hybridization for microbial species delineation by means of genome-to-genome sequence comparison
    • Auch AF, von Jan M, Klenk H-P, Göker M. Digital DNA-DNA hybridization for microbial species delineation by means of genome-to-genome sequence comparison. Stand Genom Sci 2010, 2:117-134.
    • (2010) Stand Genom Sci , vol.2 , pp. 117-134
    • Auch, A.F.1    von Jan, M.2    Klenk, H.-P.3    Göker, M.4
  • 42
    • 77952891045 scopus 로고    scopus 로고
    • Standard operating procedure for calculating genome-to-genome distances based on high-scoring segment pairs
    • Auch AF, Klenk H-P, Göker M. Standard operating procedure for calculating genome-to-genome distances based on high-scoring segment pairs. Stand Genom Sci 2010, 2:142-148.
    • (2010) Stand Genom Sci , vol.2 , pp. 142-148
    • Auch, A.F.1    Klenk, H.-P.2    Göker, M.3
  • 43
    • 84874011652 scopus 로고    scopus 로고
    • Genome sequence-based species delimitation with confidence intervals and improved distance functions
    • Meier-Kolthoff JP, Alexander AF, Hans-Peter K, Markus K. Genome sequence-based species delimitation with confidence intervals and improved distance functions. BMC Bioinform 2013, 14:60.
    • (2013) BMC Bioinform , vol.14 , pp. 60
    • Meier-Kolthoff, J.P.1    Alexander, A.F.2    Hans-Peter, K.3    Markus, K.4
  • 44
    • 4544321687 scopus 로고    scopus 로고
    • Biodiversity of Vibrios
    • 10.1128/MMBR.68.3.403-431.2004, 515257, 15353563
    • Thompson FL, Iida T, Swings J. Biodiversity of Vibrios. Microbiol Mol Biol Rev 2004, 68:403-431. 10.1128/MMBR.68.3.403-431.2004, 515257, 15353563.
    • (2004) Microbiol Mol Biol Rev , vol.68 , pp. 403-431
    • Thompson, F.L.1    Iida, T.2    Swings, J.3
  • 45
    • 25144436280 scopus 로고    scopus 로고
    • Phylogeny and molecular identification of vibrios on the basis of multilocus sequence analysis
    • 10.1128/AEM.71.9.5107-5115.2005, 1214639, 16151093
    • Thompson FL, Gevers D, Thompson CC, Dawyndt P, Naser S, Hoste B, Munn CB, Swings J. Phylogeny and molecular identification of vibrios on the basis of multilocus sequence analysis. Appl Environ Microbiol 2005, 71:5107-5115. 10.1128/AEM.71.9.5107-5115.2005, 1214639, 16151093.
    • (2005) Appl Environ Microbiol , vol.71 , pp. 5107-5115
    • Thompson, F.L.1    Gevers, D.2    Thompson, C.C.3    Dawyndt, P.4    Naser, S.5    Hoste, B.6    Munn, C.B.7    Swings, J.8
  • 46
    • 44449179494 scopus 로고    scopus 로고
    • Identification of vibrio cholerae and vibrio mimicus by multilocus sequence analysis (MLSA)
    • Thompson CC, Thompson FL, Vicente ACP. Identification of vibrio cholerae and vibrio mimicus by multilocus sequence analysis (MLSA). Int J Syst Evol Microbiol 2008, 58(Pt 3):617-621.
    • (2008) Int J Syst Evol Microbiol , vol.58 , Issue.PART 3 , pp. 617-621
    • Thompson, C.C.1    Thompson, F.L.2    Vicente, A.C.P.3
  • 47
    • 80053650964 scopus 로고    scopus 로고
    • Usefulness of a real-time PCR platform for G + C content and DNA-DNA hybridization estimations in vibrios
    • 10.1099/ijs.0.023606-0, 21057054
    • Moreira AP, Pereira N, Thompson FL. Usefulness of a real-time PCR platform for G + C content and DNA-DNA hybridization estimations in vibrios. Int J Syst Evol Microbiol 2011, 61:2379-2383. 10.1099/ijs.0.023606-0, 21057054.
    • (2011) Int J Syst Evol Microbiol , vol.61 , pp. 2379-2383
    • Moreira, A.P.1    Pereira, N.2    Thompson, F.L.3
  • 49
    • 84875273263 scopus 로고    scopus 로고
    • Horizontal gene transfer and the evolution of bacterial and archaeal population structure
    • 10.1016/j.tig.2012.12.006, 23332119
    • Polz MF, Alm EJ, Hanage WP. Horizontal gene transfer and the evolution of bacterial and archaeal population structure. Trends Genet 2013, 29:170-175. 10.1016/j.tig.2012.12.006, 23332119.
    • (2013) Trends Genet , vol.29 , pp. 170-175
    • Polz, M.F.1    Alm, E.J.2    Hanage, W.P.3
  • 51
    • 84870578736 scopus 로고    scopus 로고
    • Public good dynamics drive evolution of iron acquisition strategies in natural bacterioplankton populations
    • 10.1073/pnas.1213344109, 3523850, 23169633
    • Cordero OX, Ventouras LA, DeLong EF, Polz MF. Public good dynamics drive evolution of iron acquisition strategies in natural bacterioplankton populations. Proc Nat Acad Sci USA 2012, 109:20059-20064. 10.1073/pnas.1213344109, 3523850, 23169633.
    • (2012) Proc Nat Acad Sci USA , vol.109 , pp. 20059-20064
    • Cordero, O.X.1    Ventouras, L.A.2    DeLong, E.F.3    Polz, M.F.4
  • 52
    • 84859499489 scopus 로고    scopus 로고
    • Population genomics of early events in the ecological differentiation of bacteria
    • 10.1126/science.1218198, 3337212, 22491847
    • Shapiro BJ, Friedman J, Cordero OX, Preheim SP, Timberlake SC, Szabo G, Polz MF, Alm EJ. Population genomics of early events in the ecological differentiation of bacteria. Science 2012, 336:48-51. 10.1126/science.1218198, 3337212, 22491847.
    • (2012) Science , vol.336 , pp. 48-51
    • Shapiro, B.J.1    Friedman, J.2    Cordero, O.X.3    Preheim, S.P.4    Timberlake, S.C.5    Szabo, G.6    Polz, M.F.7    Alm, E.J.8
  • 54
    • 82955240516 scopus 로고    scopus 로고
    • Merging taxonomy with ecological population prediction in a case study of Vibrionaceae
    • 10.1128/AEM.00665-11, 3194886, 21873482
    • Preheim SP, Timberlake S, Polz MF. Merging taxonomy with ecological population prediction in a case study of Vibrionaceae. Appl Environ Microbiol 2011, 77:7195-7206. 10.1128/AEM.00665-11, 3194886, 21873482.
    • (2011) Appl Environ Microbiol , vol.77 , pp. 7195-7206
    • Preheim, S.P.1    Timberlake, S.2    Polz, M.F.3
  • 57
    • 45249102246 scopus 로고    scopus 로고
    • Vibrio cholerae O1 hybrid El Tor strains, Asia and Africa
    • 10.3201/eid1406.080129, 2600311, 18507925
    • Safa A, Sultana J, Cam PD, Mwansa JC, Kong RY. Vibrio cholerae O1 hybrid El Tor strains, Asia and Africa. Emerg Infect Dis 2008, 14:987-988. 10.3201/eid1406.080129, 2600311, 18507925.
    • (2008) Emerg Infect Dis , vol.14 , pp. 987-988
    • Safa, A.1    Sultana, J.2    Cam, P.D.3    Mwansa, J.C.4    Kong, R.Y.5
  • 58
    • 0018899141 scopus 로고
    • Phylogenetic analysis of the mycoplasmas
    • 10.1073/pnas.77.1.494, 348298, 6928642
    • Woese CR, Maniloff J, Zablen LB. Phylogenetic analysis of the mycoplasmas. Proc Nat Acad Sci USA 1980, 77:494-498. 10.1073/pnas.77.1.494, 348298, 6928642.
    • (1980) Proc Nat Acad Sci USA , vol.77 , pp. 494-498
    • Woese, C.R.1    Maniloff, J.2    Zablen, L.B.3
  • 59
    • 0345975842 scopus 로고
    • Origin and evolution of wall-less prokaryotes
    • New York: Marcel Dekkar Inc, Madoff S
    • Neimark HC. Origin and evolution of wall-less prokaryotes. The bacterial L-Forms 1986, 21-42. New York: Marcel Dekkar Inc, Madoff S.
    • (1986) The bacterial L-Forms , pp. 21-42
    • Neimark, H.C.1
  • 60
    • 77955549622 scopus 로고    scopus 로고
    • Sea-land transitions in isopods: pattern of symbiont distribution in two species of intertidal isopods Ligia pallasii and Ligia occidentalis in the Eastern Pacific
    • Eberl R. Sea-land transitions in isopods: pattern of symbiont distribution in two species of intertidal isopods Ligia pallasii and Ligia occidentalis in the Eastern Pacific. Symbiosis (Philadelphia, Pa) 2010, 51:107-116.
    • (2010) Symbiosis (Philadelphia, Pa) , vol.51 , pp. 107-116
    • Eberl, R.1
  • 61
    • 78149481811 scopus 로고    scopus 로고
    • Spatial variation in an avian host community: implications for disease dynamics
    • 10.1007/s10393-009-0269-2, 20130959
    • States SL, Hochachka WM, Dhondt A. Spatial variation in an avian host community: implications for disease dynamics. EcoHealth 2009, 6:540-545. 10.1007/s10393-009-0269-2, 20130959.
    • (2009) EcoHealth , vol.6 , pp. 540-545
    • States, S.L.1    Hochachka, W.M.2    Dhondt, A.3
  • 63
    • 64749102782 scopus 로고    scopus 로고
    • Culture-independent characterization of bacterial communities associated with the cold-water coral Lophelia pertusa in the northeastern Gulf of Mexico
    • 10.1128/AEM.02357-08, 2675238, 19233949
    • Kellogg CA, Lisle JT, Galkiewicz JP. Culture-independent characterization of bacterial communities associated with the cold-water coral Lophelia pertusa in the northeastern Gulf of Mexico. Appl Environ Microbiol 2009, 75:2294-2303. 10.1128/AEM.02357-08, 2675238, 19233949.
    • (2009) Appl Environ Microbiol , vol.75 , pp. 2294-2303
    • Kellogg, C.A.1    Lisle, J.T.2    Galkiewicz, J.P.3
  • 64
    • 0141445785 scopus 로고    scopus 로고
    • Phylogeny and evolution
    • New York: Kluver Academic/Plenum Publishers, Razin RH
    • Maniloff J. Phylogeny and evolution. Molecular Biology and Pathogenicity of Mycoplasmas 2002, 31-43. New York: Kluver Academic/Plenum Publishers, Razin RH.
    • (2002) Molecular Biology and Pathogenicity of Mycoplasmas , pp. 31-43
    • Maniloff, J.1
  • 65
    • 35448934845 scopus 로고    scopus 로고
    • Revised minimal standards for description of new species of the class Mollicutes (division Tenericutes)
    • Brown DR, Whitcomb RF, Bradbury JM. Revised minimal standards for description of new species of the class Mollicutes (division Tenericutes). Int J Syst Evol Microb 2007, 57(Pt 11):2703-2719.
    • (2007) Int J Syst Evol Microb , vol.57 , Issue.PART 11 , pp. 2703-2719
    • Brown, D.R.1    Whitcomb, R.F.2    Bradbury, J.M.3
  • 67
    • 33748541938 scopus 로고    scopus 로고
    • Prokaryoplankton standing stocks in oligotrophic gyre and equatorial provinces of the Atlantic Ocean: evaluation of inter-annual variability
    • Heywood JL, Zubkov MV, Tarran GA, Fuchs BMHP. Prokaryoplankton standing stocks in oligotrophic gyre and equatorial provinces of the Atlantic Ocean: evaluation of inter-annual variability. Deep Sea Res 2006, 53:1530-1547.
    • (2006) Deep Sea Res , vol.53 , pp. 1530-1547
    • Heywood, J.L.1    Zubkov, M.V.2    Tarran, G.A.3    Fuchs, B.M.H.P.4
  • 69
    • 0033009854 scopus 로고    scopus 로고
    • Prochlorococcus, a marine photosynthetic prokaryote of global significance
    • 98958, 10066832
    • Partensky F, Hess WR, Vaulot D. Prochlorococcus, a marine photosynthetic prokaryote of global significance. Microbiol Mol Biol Rev 1999, 63:106-127. 98958, 10066832.
    • (1999) Microbiol Mol Biol Rev , vol.63 , pp. 106-127
    • Partensky, F.1    Hess, W.R.2    Vaulot, D.3
  • 70
    • 65549114090 scopus 로고    scopus 로고
    • The interplay of homologous recombination and horizontal gene transfer in bacterial speciation
    • 10.1007/978-1-60327-853-9_3, 19271178
    • Lawrence JG, Retchless AC. The interplay of homologous recombination and horizontal gene transfer in bacterial speciation. Methods Mol Biol 2009, 532:29-53. 10.1007/978-1-60327-853-9_3, 19271178.
    • (2009) Methods Mol Biol , vol.532 , pp. 29-53
    • Lawrence, J.G.1    Retchless, A.C.2
  • 71
    • 78650792359 scopus 로고    scopus 로고
    • Metapopulation structure of Vibrionaceae among coastal marine invertebrates
    • 10.1111/j.1462-2920.2010.02328.x, 20819104
    • Preheim SP, Boucher Y, Wildschutte H, David LA, Veneziano D, Alm EJ, Polz MF. Metapopulation structure of Vibrionaceae among coastal marine invertebrates. Environ Microbiol 2011, 13:265-275. 10.1111/j.1462-2920.2010.02328.x, 20819104.
    • (2011) Environ Microbiol , vol.13 , pp. 265-275
    • Preheim, S.P.1    Boucher, Y.2    Wildschutte, H.3    David, L.A.4    Veneziano, D.5    Alm, E.J.6    Polz, M.F.7
  • 72
    • 79959466997 scopus 로고    scopus 로고
    • Genome sequencing reveals unique mutations in characteristic metabolic pathways and the transfer of virulence genes between V. mimicus and V. cholerae
    • 10.1371/journal.pone.0021299, 3120857, 21731695
    • Wang D, Wang H, Zhou Y, Zhang Q, Zhang F, Du P, Wang S, Chen C, Kan B. Genome sequencing reveals unique mutations in characteristic metabolic pathways and the transfer of virulence genes between V. mimicus and V. cholerae. PloS One 2011, 6:e21299. 10.1371/journal.pone.0021299, 3120857, 21731695.
    • (2011) PloS One , vol.6
    • Wang, D.1    Wang, H.2    Zhou, Y.3    Zhang, Q.4    Zhang, F.5    Du, P.6    Wang, S.7    Chen, C.8    Kan, B.9


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.