-
6
-
-
0028055018
-
The winds of (evolutionary) change: Breathing new life into microbiology
-
(1994)
J. Bacteriol.
, vol.176
, pp. 1-6
-
-
Olsen, G.J.1
-
9
-
-
0030868589
-
Comparison of archaeal and bacterial genomes: Computer analysis of protein sequences predicts novel functions and suggests a chimeric origin for the archaea
-
(1997)
Mol. Microbiol.
, vol.25
, pp. 619-637
-
-
Koonin, E.V.1
-
10
-
-
0033603539
-
Phylogenetic classification and the universal tree
-
(1999)
Science
, vol.284
, pp. 2124-2129
-
-
Doolittle, W.F.1
-
15
-
-
0035162592
-
The COG database: New developments in phylogenetic classification of proteins from complete genomes
-
(2001)
Nucleic Acids Res.
, vol.29
, pp. 22-28
-
-
Tatusov, R.L.1
-
16
-
-
0036143446
-
Genomes in flux: The evolution of archaeal and proteobacterial gene content
-
(2002)
Genome Res.
, vol.12
, pp. 17-25
-
-
Snel, B.1
-
18
-
-
0034831587
-
Defining the core of nontransferable prokaryotic genes: The euryarchaeal core
-
(2001)
J. Mol. Evol.
, vol.53
, pp. 340-350
-
-
Nesbo, C.L.1
-
19
-
-
0033591094
-
Is it time to uproot the tree of life?
-
(1999)
Science
, vol.284
, pp. 1305-1307
-
-
Pennisi, E.1
-
21
-
-
0032900532
-
Genome phylogeny based on gene content
-
(1999)
Nat. Genet.
, vol.21
, pp. 108-110
-
-
Snel, B.1
-
22
-
-
0000298267
-
Lateral gene transfer, genome surveys, and the phylogeny of prokaryotes
-
(1999)
Science
, vol.286
-
-
Huynen, M.A.1
-
23
-
-
0036499057
-
SHOT: A web server for the construction of genome phylogenies
-
(2002)
Trends Genet.
, vol.18
, pp. 158-162
-
-
Korbel, J.O.1
-
24
-
-
0032778047
-
The genomic tree as revealed from whole proteome comparisons
-
(1999)
Genome Res.
, vol.9
, pp. 550-557
-
-
Tekaia, F.1
-
27
-
-
0033918311
-
Whole-genome trees based on the occurrence of folds and orthologs: Implications for comparing genomes on different levels
-
(2000)
Genome Res.
, vol.10
, pp. 808-818
-
-
Lin, J.1
Gerstein, M.2
-
28
-
-
0034572821
-
Towards understanding the first genome sequence of a crenarchaeon by genome annotation using clusters of orthologous groups of proteins (COGs)
-
RESEARCH0009
-
(2000)
Genome Biol.
-
-
Natale, D.A.1
-
29
-
-
0348044549
-
Genome trees constructed using five different approaches suggest new major bacterial clades
-
(2001)
BMC Evol. Biol.
, vol.1
, pp. 8
-
-
Wolf, Y.I.1
-
30
-
-
0036210883
-
Inferring genome trees by using a filter to eliminate phylogenetically discordant sequences and a distance matrix based on mean normalized BLASTP scores
-
(2002)
J. Bacteriol.
, vol.184
, pp. 2072-2080
-
-
Clarke, G.D.1
-
31
-
-
0033008596
-
Distribution of protein folds in the three superkingdoms of life
-
(1999)
Genome Res.
, vol.9
, pp. 17-26
-
-
Wolf, Y.I.1
-
32
-
-
0000298267
-
Lateral gene transfer, genome surveys, and the phylogeny of prokaryotes
-
(1999)
Science
, vol.286
-
-
Doolittle, W.F.1
-
34
-
-
0035085816
-
Genome alignment, evolution of prokaryotic genome organization and prediction of gene function using genomic context
-
(2001)
Genome Res.
, vol.11
, pp. 356-372
-
-
Wolf, Y.I.1
-
37
-
-
0033858110
-
From complete genomes to measures of substitution rate variability within and between proteins
-
(2000)
Genome Res.
, vol.10
, pp. 991-1000
-
-
Grishin, N.V.1
-
38
-
-
0033859839
-
Phylogeny of 33 ribosomal and six other proteins encoded in an ancient gene cluster that is conserved across prokaryotic genomes: Influence of excluding poorly alignable sites from analysis
-
(2000)
Int. J. Syst. Evol. Microbiol.
, vol.50
, pp. 1655-1663
-
-
Hansmann, S.1
Martin, W.2
-
39
-
-
0034942865
-
Universal trees based on large combined protein sequence data sets
-
(2001)
Nat. Genet.
, vol.28
, pp. 281-285
-
-
Brown, J.R.1
-
46
-
-
0027104018
-
Matrix representation in reconstructing phylogenetic relationships among the eukaryotes
-
(1992)
Biosystems
, vol.28
, pp. 47-55
-
-
Ragan, M.A.1
-
48
-
-
0033936591
-
Extracting species trees from complex gene trees: Reconciled trees and vertebrate phylogeny
-
(2000)
Mol. Phylogenet. Evol.
, vol.14
, pp. 89-106
-
-
Page, R.D.1
|