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Nano Letters

Volumn 13, Issue 12, 2013, Pages 6144-6150

Nanopore-based identification of individual nucleotides for direct RNA sequencing

(4) Ayub, Mariam a Hardwick, Steven W b Luisi, Ben F b Bayley, Hagan a

a UNIVERSITY OF OXFORD (United Kingdom)

b UNIVERSITY OF CAMBRIDGE (United Kingdom)

Author keywords

hemolysin; base identification; cyclodextrin; nanopore; protein engineering; RNA sequencing

Indexed keywords

DIPHOSPHATES; IDENTIFICATION METHOD; IDENTIFICATION OF INDIVIDUALS; MONOPHOSPHATES; POLYNUCLEOTIDE PHOSPHORYLASE; PROTEIN ENGINEERING; RIBONUCLEOSIDES; RNA SEQUENCING;

BLOOD; CYCLODEXTRINS; NUCLEOTIDES; RNA;

NANOPORES;

HEMOLYSIN; NANOMATERIAL; NUCLEOTIDE;

ARTICLE; CHEMISTRY; ISOLATION AND PURIFICATION; NANOPORE; NUCLEOTIDE SEQUENCE; SEQUENCE ANALYSIS;

BASE SEQUENCE; HEMOLYSIN PROTEINS; NANOPORES; NANOSTRUCTURES; NUCLEOTIDES; SEQUENCE ANALYSIS, RNA;

EID: 84890387605 PISSN: 15306984 EISSN: 15306992 Source Type: Journal
DOI: 10.1021/nl403469r Document Type: Article

Times cited : (104)

References (51)

1
- 33751414735
- Bayley, H. Curr. Opin. Chem. Biol. 2006, 10 (6) 628-637
- (2006) Curr. Opin. Chem. Biol. , vol.10 , Issue.6 , pp. 628-637
- Bayley, H.¹

2
- 53649108801
- Branton, D.; Deamer, D. W.; Marziali, A.; Bayley, H.; Benner, S. A.; Butler, T.; Di Ventra, M.; Garaj, S.; Hibbs, A.; Huang, X.; Jovanovich, S. B.; Krstic, P. S.; Lindsay, S.; Ling, X. S.; Mastrangelo, C. H.; Meller, A.; Oliver, J. S.; Pershin, Y. V.; Ramsey, J. M.; Riehn, R.; Soni, G. V.; Tabard-Cossa, V.; Wanunu, M.; Wiggin, M.; Schloss, J. A. Nat. Biotechnol. 2008, 26 (10) 1146-1153
- (2008) Nat. Biotechnol. , vol.26 , Issue.10 , pp. 1146-1153
- Branton, D.¹ Deamer, D.W.² Marziali, A.³ Bayley, H.⁴ Benner, S.A.⁵ Butler, T.⁶ Di Ventra, M.⁷ Garaj, S.⁸ Hibbs, A.⁹ Huang, X.¹⁰ Jovanovich, S.B.¹¹ Krstic, P.S.¹² Lindsay, S.¹³ Ling, X.S.¹⁴ Mastrangelo, C.H.¹⁵ Meller, A.¹⁶ Oliver, J.S.¹⁷ Pershin, Y.V.¹⁸ Ramsey, J.M.¹⁹ Riehn, R.²⁰ more..

3
- 34347237191
- Muthukumar, M. Annu. Rev. Biophys. Biomol. Struct. 2007, 36 (1) 435-450
- (2007) Annu. Rev. Biophys. Biomol. Struct. , vol.36 , Issue.1 , pp. 435-450
- Muthukumar, M.¹

4
- 0030447720
- Song, L. Z.; Hobaugh, M. R.; Shustak, C.; Cheley, S.; Bayley, H.; Gouaux, J. E. Science 1996, 274 (5294) 1859-1866
- (1996) Science , vol.274 , Issue.5294 , pp. 1859-1866
- Song, L.Z.¹ Hobaugh, M.R.² Shustak, C.³ Cheley, S.⁴ Bayley, H.⁵ Gouaux, J.E.⁶

5
- 0030465241
- Kasianowicz, J. J.; Brandin, E.; Branton, D.; Deamer, D. W. Proc. Natl. Acad. Sci. U.S.A. 1996, 93 (24) 13770-3
- (1996) Proc. Natl. Acad. Sci. U.S.A. , vol.93 , Issue.24 , pp. 13770-13773
- Kasianowicz, J.J.¹ Brandin, E.² Branton, D.³ Deamer, D.W.⁴

6
- 14844290867
- Ashkenasy, N.; Sánchez-Quesada, J.; Bayley, H.; Ghadiri, M. R. Angew. Chem., Int. Ed. 2005, 44 (9) 1401-1404
- (2005) Angew. Chem., Int. Ed. , vol.44 , Issue.9 , pp. 1401-1404
- Ashkenasy, N.¹ Sánchez-Quesada, J.² Bayley, H.³ Ghadiri, M.R.⁴

7
- 32244449078
- Astier, Y.; Braha, O.; Bayley, H. J. Am. Chem. Soc. 2006, 128 (5) 1705-1710
- (2006) J. Am. Chem. Soc. , vol.128 , Issue.5 , pp. 1705-1710
- Astier, Y.¹ Braha, O.² Bayley, H.³

8
- 66049132042
- Stoddart, D.; Heron, A. J.; Mikhailova, E.; Maglia, G.; Bayley, H. Proc. Natl. Acad. Sci. U.S.A. 2009, 106 (19) 7702-7
- (2009) Proc. Natl. Acad. Sci. U.S.A. , vol.106 , Issue.19 , pp. 7702-7707
- Stoddart, D.¹ Heron, A.J.² Mikhailova, E.³ Maglia, G.⁴ Bayley, H.⁵

9
- 70349527955
- Purnell, R. F.; Schmidt, J. J. ACS Nano 2009, 3 (9) 2533-8
- (2009) ACS Nano , vol.3 , Issue.9 , pp. 2533-2538
- Purnell, R.F.¹ Schmidt, J.J.²

10
- 77958014348
- Derrington, I. M.; Butler, T. Z.; Collins, M. D.; Manrao, E.; Pavlenok, M.; Niederweis, M.; Gundlach, J. H. Proc. Natl. Acad. Sci. U.S.A. 2010, 107 (37) 16060-16065
- (2010) Proc. Natl. Acad. Sci. U.S.A. , vol.107 , Issue.37 , pp. 16060-16065
- Derrington, I.M.¹ Butler, T.Z.² Collins, M.D.³ Manrao, E.⁴ Pavlenok, M.⁵ Niederweis, M.⁶ Gundlach, J.H.⁷

11
- 80053530116
- Manrao, E. A.; Derrington, I. M.; Pavlenok, M.; Niederweis, M.; Gundlach, J. H. PLoS One 2011, 6 (10) e25723
- (2011) PLoS One , vol.6 , Issue.10 , pp. 25723
- Manrao, E.A.¹ Derrington, I.M.² Pavlenok, M.³ Niederweis, M.⁴ Gundlach, J.H.⁵

12
- 38349169632
- Cockroft, S. L.; Chu, J.; Amorin, M.; Ghadiri, M. R. J. Am. Chem. Soc. 2008, 130 (3) 818-820
- (2008) J. Am. Chem. Soc. , vol.130 , Issue.3 , pp. 818-820
- Cockroft, S.L.¹ Chu, J.² Amorin, M.³ Ghadiri, M.R.⁴

13
- 78149408624
- Olasagasti, F.; Lieberman, K. R.; Benner, S.; Cherf, G. M.; Dahl, J. M.; Deamer, D. W.; Akeson, M. Nat. Nanotechnol. 2010, 5 (11) 798-806
- (2010) Nat. Nanotechnol. , vol.5 , Issue.11 , pp. 798-806
- Olasagasti, F.¹ Lieberman, K.R.² Benner, S.³ Cherf, G.M.⁴ Dahl, J.M.⁵ Deamer, D.W.⁶ Akeson, M.⁷

14
- 78650483427
- Chu, J.; Gonzalez-Lopez, M.; Cockroft, S. L.; Amorin, M.; Ghadiri, M. R. Angew. Chem., Int. Ed. 2010, 49 (52) 10106-9
- (2010) Angew. Chem., Int. Ed. , vol.49 , Issue.52 , pp. 10106-10109
- Chu, J.¹ Gonzalez-Lopez, M.² Cockroft, S.L.³ Amorin, M.⁴ Ghadiri, M.R.⁵

15
- 78650280872
- Lieberman, K. R.; Cherf, G. M.; Doody, M. J.; Olasagasti, F.; Kolodji, Y.; Akeson, M. J. Am. Chem. Soc. 2010, 132 (50) 17961-72
- (2010) J. Am. Chem. Soc. , vol.132 , Issue.50 , pp. 17961-17972
- Lieberman, K.R.¹ Cherf, G.M.² Doody, M.J.³ Olasagasti, F.⁴ Kolodji, Y.⁵ Akeson, M.⁶

16
- 84860435798
- Pennisi, E. Science 2012, 336 (6081) 534-537
- (2012) Science , vol.336 , Issue.6081 , pp. 534-537
- Pennisi, E.¹

17
- 84859633774
- Schneider, G. F.; Dekker, C. Nat. Biotechnol. 2012, 30 (4) 326-328
- (2012) Nat. Biotechnol. , vol.30 , Issue.4 , pp. 326-328
- Schneider, G.F.¹ Dekker, C.²

18
- 84863455680
- Bayley, H. Phys. Life Rev. 2012, 9 (2) 161-163
- (2012) Phys. Life Rev. , vol.9 , Issue.2 , pp. 161-163
- Bayley, H.¹

19
- 84859175970
- Cherf, G. M.; Lieberman, K. R.; Rashid, H.; Lam, C. E.; Karplus, K.; Akeson, M. Nat. Biotechnol. 2012, 30 (4) 344-8
- (2012) Nat. Biotechnol. , vol.30 , Issue.4 , pp. 344-348
- Cherf, G.M.¹ Lieberman, K.R.² Rashid, H.³ Lam, C.E.⁴ Karplus, K.⁵ Akeson, M.⁶

20
- 84859629295
- Manrao, E. A.; Derrington, I. M.; Laszlo, A. H.; Langford, K. W.; Hopper, M. K.; Gillgren, N.; Pavlenok, M.; Niederweis, M.; Gundlach, J. H. Nat. Biotechnol. 2012, 30 (4) 349-53
- (2012) Nat. Biotechnol. , vol.30 , Issue.4 , pp. 349-353
- Manrao, E.A.¹ Derrington, I.M.² Laszlo, A.H.³ Langford, K.W.⁴ Hopper, M.K.⁵ Gillgren, N.⁶ Pavlenok, M.⁷ Niederweis, M.⁸ Gundlach, J.H.⁹

21
- 64449088698
- Clarke, J.; Wu, H.-C.; Jayasinghe, L.; Patel, A.; Reid, S.; Bayley, H. Nat. Nanotechnol. 2009, 4 (4) 265-270
- (2009) Nat. Nanotechnol. , vol.4 , Issue.4 , pp. 265-270
- Clarke, J.¹ Wu, H.-C.² Jayasinghe, L.³ Patel, A.⁴ Reid, S.⁵ Bayley, H.⁶

22
- 57749195712
- Wang, Z.; Gerstein, M.; Snyder, M. Nat. Rev. Genet. 2009, 10 (1) 57-63
- (2009) Nat. Rev. Genet. , vol.10 , Issue.1 , pp. 57-63
- Wang, Z.¹ Gerstein, M.² Snyder, M.³

23
- 53849102573
- Marguerat, S.; Wilhelm, B. T.; Bahler, J. Biochem. Soc. Trans. 2008, 36, 1091-1096
- (2008) Biochem. Soc. Trans. , vol.36 , pp. 1091-1096
- Marguerat, S.¹ Wilhelm, B.T.² Bahler, J.³

24
- 46249106990
- Mortazavi, A.; Williams, B. A.; McCue, K.; Schaeffer, L.; Wold, B. Nat. Methods 2008, 5 (7) 621-628
- (2008) Nat. Methods , vol.5 , Issue.7 , pp. 621-628
- Mortazavi, A.¹ Williams, B.A.² McCue, K.³ Schaeffer, L.⁴ Wold, B.⁵

25
- 62049085786
- Maher, C. A.; Kumar-Sinha, C.; Cao, X.; Kalyana-Sundaram, S.; Han, B.; Jing, X.; Sam, L.; Barrette, T.; Palanisamy, N.; Chinnaiyan, A. M. Nature 2009, 458 (7234) 97-101
- (2009) Nature , vol.458 , Issue.7234 , pp. 97-101
- Maher, C.A.¹ Kumar-Sinha, C.² Cao, X.³ Kalyana-Sundaram, S.⁴ Han, B.⁵ Jing, X.⁶ Sam, L.⁷ Barrette, T.⁸ Palanisamy, N.⁹ Chinnaiyan, A.M.¹⁰

26
- 66149092582
- Maher, B. Nature 2009, 459 (7244) 146-7
- (2009) Nature , vol.459 , Issue.7244 , pp. 146-147
- Maher, B.¹

27
- 84555163558
- Wanunu, M.; Bhattacharya, S.; Xie, Y.; Tor, Y.; Aksimentiev, A.; Drndic, M. ACS Nano 2011, 5 (12) 9345-9353
- (2011) ACS Nano , vol.5 , Issue.12 , pp. 9345-9353
- Wanunu, M.¹ Bhattacharya, S.² Xie, Y.³ Tor, Y.⁴ Aksimentiev, A.⁵ Drndic, M.⁶

28
- 60149088848
- Carthew, R. W.; Sontheimer, E. J. Cell 2009, 136 (4) 642-655
- (2009) Cell , vol.136 , Issue.4 , pp. 642-655
- Carthew, R.W.¹ Sontheimer, E.J.²

29
- 78149415469
- Wanunu, M.; Dadosh, T.; Ray, V.; Jin, J.; McReynolds, L.; Drndic, M. Nat. Nanotechnol. 2010, 5 (11) 807-814
- (2010) Nat. Nanotechnol. , vol.5 , Issue.11 , pp. 807-814
- Wanunu, M.¹ Dadosh, T.² Ray, V.³ Jin, J.⁴ McReynolds, L.⁵ Drndic, M.⁶

30
- 80455174619
- Wang, Y.; Zheng, D.; Tan, Q.; Wang, M. X.; Gu, L.-Q. Nat. Nanotechnol. 2011, 6 (10) 668-674
- (2011) Nat. Nanotechnol. , vol.6 , Issue.10 , pp. 668-674
- Wang, Y.¹ Zheng, D.² Tan, Q.³ Wang, M.X.⁴ Gu, L.-Q.⁵

31
- 0032762996
- Akeson, M.; Branton, D.; Kasianowicz, J. J.; Brandin, E.; Deamer, D. W. Biophys. J. 1999, 77 (6) 3227-33
- (1999) Biophys. J. , vol.77 , Issue.6 , pp. 3227-3233
- Akeson, M.¹ Branton, D.² Kasianowicz, J.J.³ Brandin, E.⁴ Deamer, D.W.⁵

32
- 84869155578
- Ayub, M.; Bayley, H. Nano Lett. 2012, 12 (11) 5637-5643
- (2012) Nano Lett. , vol.12 , Issue.11 , pp. 5637-5643
- Ayub, M.¹ Bayley, H.²

33
- 84879077504
- Cracknell, J. A.; Japrung, D.; Bayley, H. Nano Lett. 2013, 13 (6) 2500-2505
- (2013) Nano Lett. , vol.13 , Issue.6 , pp. 2500-2505
- Cracknell, J.A.¹ Japrung, D.² Bayley, H.³

34
- 0035989992
- Cheley, S.; Gu, L.-Q.; Bayley, H. Chem. Biol. 2002, 9 (7) 829-838
- (2002) Chem. Biol. , vol.9 , Issue.7 , pp. 829-838
- Cheley, S.¹ Gu, L.-Q.² Bayley, H.³

35
- 77952412597
- Banerjee, A.; Mikhailova, E.; Cheley, S.; Gu, L.-Q.; Montoya, M.; Nagaoka, Y.; Gouaux, E.; Bayley, H. Proc. Natl. Acad. Sci. U.S.A. 2010, 107 (18) 8165-8170
- (2010) Proc. Natl. Acad. Sci. U.S.A. , vol.107 , Issue.18 , pp. 8165-8170
- Banerjee, A.¹ Mikhailova, E.² Cheley, S.³ Gu, L.-Q.⁴ Montoya, M.⁵ Nagaoka, Y.⁶ Gouaux, E.⁷ Bayley, H.⁸

36
- 0034614053
- Sanchez-Quesada, J.; Ghadiri, M. R.; Bayley, H.; Braha, O. J. Am. Chem. Soc. 2000, 122 (48) 11757-11766
- (2000) J. Am. Chem. Soc. , vol.122 , Issue.48 , pp. 11757-11766
- Sanchez-Quesada, J.¹ Ghadiri, M.R.² Bayley, H.³ Braha, O.⁴

37
- 0035951448
- Gu, L.-Q.; Cheley, S.; Bayley, H. Science 2001, 291 (5504) 636-640
- (2001) Science , vol.291 , Issue.5504 , pp. 636-640
- Gu, L.-Q.¹ Cheley, S.² Bayley, H.³

38
- 0035169385
- Gu, L.-Q.; Cheley, S.; Bayley, H. J. Gen. Physiol. 2001, 118 (5) 481-494
- (2001) J. Gen. Physiol. , vol.118 , Issue.5 , pp. 481-494
- Gu, L.-Q.¹ Cheley, S.² Bayley, H.³

39
- 34147179318
- Yuan, D.-Q.; Izuka, A.; Fukudome, M.; Rekharsky, M. V.; Inoue, Y.; Fujita, K. Tetrahedron Lett. 2007, 48 (19) 3479-3483
- (2007) Tetrahedron Lett. , vol.48 , Issue.19 , pp. 3479-3483
- Yuan, D.-Q.¹ Izuka, A.² Fukudome, M.³ Rekharsky, M.V.⁴ Inoue, Y.⁵ Fujita, K.⁶

40
- 37549026870
- Wu, H.-C.; Astier, Y.; Maglia, G.; Mikhailova, E.; Bayley, H. J. Am. Chem. Soc. 2007, 129 (51) 16142-16148
- (2007) J. Am. Chem. Soc. , vol.129 , Issue.51 , pp. 16142-16148
- Wu, H.-C.¹ Astier, Y.² Maglia, G.³ Mikhailova, E.⁴ Bayley, H.⁵

41
- 84890336363
- Hardwick, S. W.; Gubbey, T.; Hug, I.; Jenal, U.; Luisi, B. F. Open Biol. 2012, 2, 4
- (2012) Open Biol. , vol.2 , pp. 4
- Hardwick, S.W.¹ Gubbey, T.² Hug, I.³ Jenal, U.⁴ Luisi, B.F.⁵

42
- 79952321198
- Hardwick, S. W.; Chan, V. S. Y.; Broadhurst, R. W.; Luisi, B. F. Nucleic Acids Res. 2011, 39 (4) 1449-1459
- (2011) Nucleic Acids Res. , vol.39 , Issue.4 , pp. 1449-1459
- Hardwick, S.W.¹ Chan, V.S.Y.² Broadhurst, R.W.³ Luisi, B.F.⁴

43
- 0021891882
- Eckstein, F. Annu. Rev. Biochem. 1985, 54, 367-402
- (1985) Annu. Rev. Biochem. , vol.54 , pp. 367-402
- Eckstein, F.¹

44
- 0014773872
- Eckstein, F.; Gindl, H. Eur. J. Biochem. 1970, 13 (3) 558-564
- (1970) Eur. J. Biochem. , vol.13 , Issue.3 , pp. 558-564
- Eckstein, F.¹ Gindl, H.²

45
- 34247536747
- Hornblower, B.; Coombs, A.; Whitaker, R. D.; Kolomeisky, A.; Picone, S. J.; Meller, A.; Akeson, M. Nat. Methods 2007, 4 (4) 315-317
- (2007) Nat. Methods , vol.4 , Issue.4 , pp. 315-317
- Hornblower, B.¹ Coombs, A.² Whitaker, R.D.³ Kolomeisky, A.⁴ Picone, S.J.⁵ Meller, A.⁶ Akeson, M.⁷

46
- 79954608650
- Nurmohamed, S.; Vincent, H. A.; Titman, C. M.; Chandran, V.; Pears, M. R.; Du, D.; Griffin, J. L.; Callaghan, A. J.; Luisi, B. F. J. Biol. Chem. 2011, 286 (16) 14315-14323
- (2011) J. Biol. Chem. , vol.286 , Issue.16 , pp. 14315-14323
- Nurmohamed, S.¹ Vincent, H.A.² Titman, C.M.³ Chandran, V.⁴ Pears, M.R.⁵ Du, D.⁶ Griffin, J.L.⁷ Callaghan, A.J.⁸ Luisi, B.F.⁹

47
- 0014806605
- Godefroy, T. Eur. J. Biochem. 1970, 14 (2) 222-231
- (1970) Eur. J. Biochem. , vol.14 , Issue.2 , pp. 222-231
- Godefroy, T.¹

48
- 0014939142
- Chou, J. Y.; Singer, M. F. J. Biol. Chem. 1970, 245 (5) 995
- (1970) J. Biol. Chem. , vol.245 , Issue.5 , pp. 995
- Chou, J.Y.¹ Singer, M.F.²

49
- 0016651413
- Chou, J. Y.; Singer, M. F.; Mcphie, P. J. Biol. Chem. 1975, 250 (2) 508-514
- (1975) J. Biol. Chem. , vol.250 , Issue.2 , pp. 508-514
- Chou, J.Y.¹ Singer, M.F.² McPhie, P.³

50
- 37549012162
- Chang, S. A.; Cozad, M.; Mackie, G. A.; Jones, G. H. J. Bacteriol. 2008, 190 (1) 98-106
- (2008) J. Bacteriol. , vol.190 , Issue.1 , pp. 98-106
- Chang, S.A.¹ Cozad, M.² Mackie, G.A.³ Jones, G.H.⁴

51
- 78650005633
- Hall, A. R.; Scott, A.; Rotem, D.; Mehta, K. K.; Bayley, H.; Dekker, C. Nat. Nanotechnol. 2010, 5 (12) 874-7
- (2010) Nat. Nanotechnol. , vol.5 , Issue.12 , pp. 874-877
- Hall, A.R.¹ Scott, A.² Rotem, D.³ Mehta, K.K.⁴ Bayley, H.⁵ Dekker, C.⁶

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