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Volumn 79, Issue 23, 2013, Pages 7220-7228

Development of a tiered multilocus sequence typing scheme for members of the Lactobacillus acidophilus complex

Author keywords

[No Author keywords available]

Indexed keywords

INDUSTRIAL PRODUCTION; LACTOBACILLUS ACIDOPHILUS; LACTOBACILLUS SPECIES; MULTILOCUS SEQUENCE TYPING; NUCLEOTIDE SUBSTITUTION; RANDOM AMPLIFIED POLYMORPHIC DNAS; RESTRICTION FRAGMENT LENGTH POLYMORPHISMS; SAFETY ASSESSMENTS;

EID: 84888256243     PISSN: 00992240     EISSN: 10985336     Source Type: Journal    
DOI: 10.1128/AEM.02257-13     Document Type: Article
Times cited : (19)

References (33)
  • 3
    • 33846931503 scopus 로고    scopus 로고
    • Similarity and differences in the Lactobacillus acidophilus group identified by polyphasic analysis and comparative genomics
    • Berger B, Pridmore RD, Barretto C, Delmas-Julien F, Schreiber K, Arigoni F, Brussow H. 2007. Similarity and differences in the Lactobacillus acidophilus group identified by polyphasic analysis and comparative genomics. J. Bacteriol. 189:1311-1321.
    • (2007) J. Bacteriol. , vol.189 , pp. 1311-1321
    • Berger, B.1    Pridmore, R.D.2    Barretto, C.3    Delmas-Julien, F.4    Schreiber, K.5    Arigoni, F.6    Brussow, H.7
  • 8
    • 40049093710 scopus 로고    scopus 로고
    • Probiotics: definition, sources, selection, and uses
    • Sanders ME. 2008. Probiotics: definition, sources, selection, and uses. Clin. Infect. Dis. 46(Suppl 2):S58-S61.
    • (2008) Clin. Infect. Dis. , vol.46 , Issue.SUPPL. 2
    • Sanders, M.E.1
  • 9
    • 0035259025 scopus 로고    scopus 로고
    • Invited review: the scientific basis of Lactobacillus acidophilus NCFM functionality as a probiotic
    • Sanders ME, Klaenhammer TR. 2001. Invited review: the scientific basis of Lactobacillus acidophilus NCFM functionality as a probiotic. J. Dairy Sci. 84:319-331.
    • (2001) J. Dairy Sci. , vol.84 , pp. 319-331
    • Sanders, M.E.1    Klaenhammer, T.R.2
  • 10
    • 33749509177 scopus 로고    scopus 로고
    • Accuracy of species identity of commercial bacterial cultures intended for probiotic or nutritional use
    • Huys G, Vancanneyt M, D'Haene K, Vankerckhoven V, Goossens H, Swings J. 2006. Accuracy of species identity of commercial bacterial cultures intended for probiotic or nutritional use. Res. Microbiol. 157:803-810.
    • (2006) Res. Microbiol. , vol.157 , pp. 803-810
    • Huys, G.1    Vancanneyt, M.2    D'Haene, K.3    Vankerckhoven, V.4    Goossens, H.5    Swings, J.6
  • 11
    • 34547892713 scopus 로고    scopus 로고
    • Genotypic and phenotypic characterization of Lactobacillus casei strains isolated from different ecological niches suggests frequent recombination and niche specificity
    • Cai H, Rodriguez BT, Zhang W, Broadbent JR, Steele JL. 2007. Genotypic and phenotypic characterization of Lactobacillus casei strains isolated from different ecological niches suggests frequent recombination and niche specificity. Microbiology 153:2655-2665
    • (2007) Microbiology , vol.153 , pp. 2655-2665
    • Cai, H.1    Rodriguez, B.T.2    Zhang, W.3    Broadbent, J.R.4    Steele, J.L.5
  • 12
    • 30744434114 scopus 로고    scopus 로고
    • Development of a multilocus sequence typing method for analysis of Lactobacillus plantarum strains
    • de Las Rivas B, Marcobal A, Munoz R. 2006. Development of a multilocus sequence typing method for analysis of Lactobacillus plantarum strains. Microbiology 152:85-93.
    • (2006) Microbiology , vol.152 , pp. 85-93
    • De Las Rivas, B.1    Marcobal, A.2    Munoz, R.3
  • 13
    • 0242657388 scopus 로고    scopus 로고
    • Analysis, characterization, and loci of the tuf genes in Lactobacillus and Bifidobacterium species and their direct application for species identification
    • Ventura M, Canchaya C, Meylan V, Klaenhammer TR, Zink R. 2003. Analysis, characterization, and loci of the tuf genes in Lactobacillus and Bifidobacterium species and their direct application for species identification. Appl. Environ. Microbiol. 69:6908-6922.
    • (2003) Appl. Environ. Microbiol. , vol.69 , pp. 6908-6922
    • Ventura, M.1    Canchaya, C.2    Meylan, V.3    Klaenhammer, T.R.4    Zink, R.5
  • 14
    • 43049140781 scopus 로고    scopus 로고
    • Taxonomic and strain-specific identification of the probiotic strain Lactobacillus rhamnosus 35 within the Lactobacillus casei group
    • Coudeyras S, Marchandin H, Fajon C, Forestier C. 2008. Taxonomic and strain-specific identification of the probiotic strain Lactobacillus rhamnosus 35 within the Lactobacillus casei group. Appl. Environ. Microbiol. 74:2679-2689.
    • (2008) Appl. Environ. Microbiol. , vol.74 , pp. 2679-2689
    • Coudeyras, S.1    Marchandin, H.2    Fajon, C.3    Forestier, C.4
  • 15
    • 77957254306 scopus 로고    scopus 로고
    • Comparison of phenotypic (Biolog system) and genotypic (random amplified polymorphic DNA-polymerase chain reaction, RAPD-PCR, and amplified fragment length polymorphism, AFLP) methods for typing Lactobacillus plantarum isolates from raw vegetables and fruits
    • Di Cagno R, Minervini G, Sgarbi E, Lazzi C, Bernini V, Neviani E, Gobbetti M. 2010. Comparison of phenotypic (Biolog system) and genotypic (random amplified polymorphic DNA-polymerase chain reaction, RAPD-PCR, and amplified fragment length polymorphism, AFLP) methods for typing Lactobacillus plantarum isolates from raw vegetables and fruits. Int. J. Food Microbiol. 143:246-253.
    • (2010) Int. J. Food Microbiol. , vol.143 , pp. 246-253
    • Di Cagno, R.1    Minervini, G.2    Sgarbi, E.3    Lazzi, C.4    Bernini, V.5    Neviani, E.6    Gobbetti, M.7
  • 16
    • 26644438794 scopus 로고    scopus 로고
    • Rapid identification of dairy lactic acid bacteria by M13-generated, RAPD-PCR fingerprint databases
    • Rossetti L, Giraffa G. 2005. Rapid identification of dairy lactic acid bacteria by M13-generated, RAPD-PCR fingerprint databases. J. Microbiol. Methods 63:135-144.
    • (2005) J. Microbiol. Methods , vol.63 , pp. 135-144
    • Rossetti, L.1    Giraffa, G.2
  • 17
    • 77951666025 scopus 로고    scopus 로고
    • Comparative evaluation of automated ribotyping and RAPD-PCR for typing of Lactobacillus spp. occurring in dental caries
    • Svec P, Kukletova M, Sedlacek I. 2010. Comparative evaluation of automated ribotyping and RAPD-PCR for typing of Lactobacillus spp. occurring in dental caries. Antonie Van Leeuwenhoek 98:85-92.
    • (2010) Antonie Van Leeuwenhoek , vol.98 , pp. 85-92
    • Svec, P.1    Kukletova, M.2    Sedlacek, I.3
  • 18
    • 37849048682 scopus 로고    scopus 로고
    • Lactobacillus strain diversity based on partial hsp60 gene sequences and design of PCR-restriction fragment length polymorphism assays for species identification and differentiation
    • Blaiotta G, Fusco V, Ercolini D, Aponte M, Pepe O, Villani F. 2008. Lactobacillus strain diversity based on partial hsp60 gene sequences and design of PCR-restriction fragment length polymorphism assays for species identification and differentiation. Appl. Environ. Microbiol. 74:208-215.
    • (2008) Appl. Environ. Microbiol. , vol.74 , pp. 208-215
    • Blaiotta, G.1    Fusco, V.2    Ercolini, D.3    Aponte, M.4    Pepe, O.5    Villani, F.6
  • 19
    • 35448962013 scopus 로고    scopus 로고
    • Multilocus sequence typing of Lactobacillus casei reveals a clonal population structure with low levels of homologous recombination
    • Diancourt L, Passet V, Chervaux C, Garault P, Smokvina T, Brisse S. 2007. Multilocus sequence typing of Lactobacillus casei reveals a clonal population structure with low levels of homologous recombination. Appl. Environ. Microbiol. 73:6601-6611.
    • (2007) Appl. Environ. Microbiol. , vol.73 , pp. 6601-6611
    • Diancourt, L.1    Passet, V.2    Chervaux, C.3    Garault, P.4    Smokvina, T.5    Brisse, S.6
  • 21
    • 77954710528 scopus 로고    scopus 로고
    • Strain typing and the ecological structure of Escherichia coli
    • Gordon DM. 2010. Strain typing and the ecological structure of Escherichia coli. J. AOAC Int. 93:974-984.
    • (2010) J. AOAC Int. , vol.93 , pp. 974-984
    • Gordon, D.M.1
  • 22
    • 0036840257 scopus 로고    scopus 로고
    • Listeria monocytogenes virulence and pathogenicity, a food safety perspective
    • Kathariou S. 2002. Listeria monocytogenes virulence and pathogenicity, a food safety perspective. J. Food Prot. 65:1811-1829.
    • (2002) J. Food Prot. , vol.65 , pp. 1811-1829
    • Kathariou, S.1
  • 23
    • 30744470609 scopus 로고    scopus 로고
    • Application of phylogenetic networks in evolutionary studies
    • Huson DH, Bryant D. 2006. Application of phylogenetic networks in evolutionary studies. Mol. Biol. Evol. 23:254-267.
    • (2006) Mol. Biol. Evol. , vol.23 , pp. 254-267
    • Huson, D.H.1    Bryant, D.2
  • 24
    • 79957613599 scopus 로고    scopus 로고
    • MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods
    • Tamura K, Peterson D, Peterson N, Stecher G, Nei M, Kumar S. 2011. MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol. Biol. Evol. 28:2731-2739.
    • (2011) Mol. Biol. Evol. , vol.28 , pp. 2731-2739
    • Tamura, K.1    Peterson, D.2    Peterson, N.3    Stecher, G.4    Nei, M.5    Kumar, S.6
  • 25
    • 0034848170 scopus 로고    scopus 로고
    • DAMBE: software package for data analysis in molecular biology and evolution
    • Xia X, Xie Z. 2001. DAMBE: software package for data analysis in molecular biology and evolution. J. Hered. 92:371-373.
    • (2001) J. Hered. , vol.92 , pp. 371-373
    • Xia, X.1    Xie, Z.2
  • 27
    • 0026722016 scopus 로고
    • Taxonomic study of the Lactobacillus acidophilus group, with recognition of Lactobacillus gallinarum sp
    • Fujisawa T, Benno Y, Yaeshima T, Mitsuoka T. 1992. Taxonomic study of the Lactobacillus acidophilus group, with recognition of Lactobacillus gallinarum sp. nov. and Lactobacillus johnsonii sp. nov. and synonymy of Lactobacillus acidophilus group A3 (Johnson et al. 1980) with the type strain of Lactobacillus amylovorus (Nakamura 1981). Int. J. Syst. Bacteriol. 42:487-491.
    • (1992) , vol.42 , pp. 487-491
    • Fujisawa, T.1    Benno, Y.2    Yaeshima, T.3    Mitsuoka, T.4
  • 28
    • 0033990717 scopus 로고    scopus 로고
    • Molecular identification of potentially probiotic lactobacilli
    • Roy D, Ward P, Vincent D, Mondou F. 2000. Molecular identification of potentially probiotic lactobacilli. Curr. Microbiol. 40:40-46.
    • (2000) Curr. Microbiol. , vol.40 , pp. 40-46
    • Roy, D.1    Ward, P.2    Vincent, D.3    Mondou, F.4
  • 29
    • 0029069692 scopus 로고
    • Evaluation of random amplified polymorphic DNA (RAPD)-PCR as a method to differentiate Lactobacillus acidophilus, Lactobacillus crispatus, Lactobacillus amylovorus, Lactobacillus gallinarum, Lactobacillus gasseri, and Lactobacillus johnsonii
    • Du Plessis EM, Dicks LM. 1995. Evaluation of random amplified polymorphic DNA (RAPD)-PCR as a method to differentiate Lactobacillus acidophilus, Lactobacillus crispatus, Lactobacillus amylovorus, Lactobacillus gallinarum, Lactobacillus gasseri, and Lactobacillus johnsonii. Curr. Microbiol. 31:114-118.
    • (1995) Curr. Microbiol. , vol.31 , pp. 114-118
    • Du Plessis, E.M.1    Dicks, L.M.2
  • 30
    • 79952269117 scopus 로고    scopus 로고
    • Multilocus sequence typing reveals a novel subspeciation of Lactobacillus delbrueckii
    • Tanigawa K, Watanabe K. 2011. Multilocus sequence typing reveals a novel subspeciation of Lactobacillus delbrueckii. Microbiology 157:727-738.
    • (2011) Microbiology , vol.157 , pp. 727-738
    • Tanigawa, K.1    Watanabe, K.2
  • 31
    • 0020519407 scopus 로고
    • Synonymy of strains of Lactobacillus acidophilus group A2 (Johnson et al. 1980) with the type strain of Lactobacillus crispatus (Brygoo and Aladame 1953) Moore and Holdeman 1970
    • Cato EP, Moore WEC, Johnson JL. 1983. Synonymy of strains of Lactobacillus acidophilus group A2 (Johnson et al. 1980) with the type strain of Lactobacillus crispatus (Brygoo and Aladame 1953) Moore and Holdeman 1970. Int. J. Syst. Bacteriol. 33:426-428.
    • (1983) Int. J. Syst. Bacteriol. , vol.33 , pp. 426-428
    • Cato, E.P.1    Moore, W.E.C.2    Johnson, J.L.3
  • 32
    • 0000177804 scopus 로고
    • Heterogeneity of the species Lactobacillus acidophilus (Moro) Hansen and Moquot as revealed by biochemical characteristics and DNA-DNA hybridization
    • Lauer E, Helming C, Kandler O. 1980. Heterogeneity of the species Lactobacillus acidophilus (Moro) Hansen and Moquot as revealed by biochemical characteristics and DNA-DNA hybridization. Zentralbl. Bakteriol. Mikrobiol. Hyg. I C 1:150-168.
    • (1980) Zentralbl. Bakteriol. Mikrobiol. Hyg. I C , vol.1 , pp. 150-168
    • Lauer, E.1    Helming, C.2    Kandler, O.3
  • 33
    • 0019251207 scopus 로고
    • Lactobacillus gasseri sp
    • Lauer E, Kandler O. 1980. Lactobacillus gasseri sp. nov., a new species of the subgenus Thermobacterium. Zentralbl. Bakteriol. Mikrobiol. Hyg. I C 1:75-78.
    • (1980) , vol.1 , pp. 75-78
    • Lauer, E.1    Kandler, O.2


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