-
1
-
-
79959875909
-
De novo assembly and validation of planaria transcriptome by massive parallel sequencing and shotgun proteomics
-
Adamidi, C., Wang, Y., Gruen, D., Mastrobuoni, G., You, X., Tolle, D., Dodt, M., Mackowiak, S. D., Gogol-Doering, A., Oenal, P. et al. (2011). De novo assembly and validation of planaria transcriptome by massive parallel sequencing and shotgun proteomics. Genome Res. 21, 1193-1200.
-
(2011)
Genome Res.
, vol.21
, pp. 1193-1200
-
-
Adamidi, C.1
Wang, Y.2
Gruen, D.3
Mastrobuoni, G.4
You, X.5
Tolle, D.6
Dodt, M.7
McKowiak, S.D.8
Gogol-Doering, A.9
Oenal, P.10
-
2
-
-
84859145480
-
The planarian neoblast: The rambling history of its origin and some current black boxes
-
Baguñà, J. (2012). The planarian neoblast: the rambling history of its origin and some current black boxes. Int. J. Dev. Biol. 56, 19-37.
-
(2012)
Int. J. Dev. Biol.
, vol.56
, pp. 19-37
-
-
Baguñà, J.1
-
3
-
-
0024437224
-
Regeneration and pattern formation in planarians. III. Evidence that neoblasts are totipotent stem cells and the source of blastema cells
-
Baguñà, J., Saló, E. and Auladell, C. (1989). Regeneration and pattern formation in planarians. III. Evidence that neoblasts are totipotent stem cells and the source of blastema cells. Development 107, 77-86.
-
(1989)
Development
, vol.107
, pp. 77-86
-
-
Baguñà, J.1
Saló, E.2
Auladell, C.3
-
4
-
-
0036631456
-
Proneural genes and the specification of neural cell types
-
Bertrand, N., Castro, D. S. and Guillemot, F. (2002). Proneural genes and the specification of neural cell types. Nat. Rev. Neurosci. 3, 517-530.
-
(2002)
Nat. Rev. Neurosci.
, vol.3
, pp. 517-530
-
-
Bertrand, N.1
Castro, D.S.2
Guillemot, F.3
-
5
-
-
84873119059
-
PBX/extradenticle is required to re-establish axial structures and polarity during planarian regeneration
-
Blassberg, R. A., Felix, D. A., Tejada-Romero, B. and Aboobaker, A. A. (2013). PBX/extradenticle is required to re-establish axial structures and polarity during planarian regeneration. Development 140, 730-739.
-
(2013)
Development
, vol.140
, pp. 730-739
-
-
Blassberg, R.A.1
Felix, D.A.2
Tejada-Romero, B.3
Aboobaker, A.A.4
-
7
-
-
37049023074
-
Regenerating the central nervous system: How easy for planarians!
-
Cebrià, F. (2007). Regenerating the central nervous system: how easy for planarians! Dev. Genes Evol. 217, 733-748.
-
(2007)
Dev. Genes Evol.
, vol.217
, pp. 733-748
-
-
Cebrià, F.1
-
8
-
-
24944490097
-
Planarian homologs of netrin and netrin receptor are required for proper regeneration of the central nervous system and the maintenance of nervous system architecture
-
Cebrià, F. and Newmark, P. A. (2005). Planarian homologs of netrin and netrin receptor are required for proper regeneration of the central nervous system and the maintenance of nervous system architecture. Development 132, 3691-3703.
-
(2005)
Development
, vol.132
, pp. 3691-3703
-
-
Cebrià, F.1
Newmark, P.A.2
-
9
-
-
0037057676
-
FGFR-related gene nou-darake restricts brain tissues to the head region of planarians
-
Cebrià, F., Kobayashi, C., Umesono, Y., Nakazawa, M., Mineta, K., Ikeo, K., Gojobori, T., Itoh, M., Taira, M., Sánchez Alvarado, A. et al. (2002). FGFR-related gene nou-darake restricts brain tissues to the head region of planarians. Nature 419, 620-624.
-
(2002)
Nature
, vol.419
, pp. 620-624
-
-
Cebrià, F.1
Kobayashi, C.2
Umesono, Y.3
Nakazawa, M.4
Mineta, K.5
Ikeo, K.6
Gojobori, T.7
Itoh, M.8
Taira, M.9
Sánchez Alvarado, A.10
-
10
-
-
34347272302
-
Regeneration and maintenance of the planarian midline is regulated by a slit orthologue
-
Cebrià, F., Guo, T., Jopek, J. and Newmark, P. A. (2007). Regeneration and maintenance of the planarian midline is regulated by a slit orthologue. Dev. Biol. 307, 394-406.
-
(2007)
Dev. Biol.
, vol.307
, pp. 394-406
-
-
Cebrià, F.1
Guo, T.2
Jopek, J.3
Newmark, P.A.4
-
11
-
-
78149372646
-
Genome-wide analyses reveal a role for peptide hormones in planarian germline development
-
Collins, J. J., 3rd, Hou, X., Romanova, E. V., Lambrus, B. G., Miller, C. M., Saberi, A., Sweedler, J. V. and Newmark, P. A. (2010). Genome-wide analyses reveal a role for peptide hormones in planarian germline development. PLoS Biol. 8, e1000509.
-
(2010)
PLoS Biol.
, vol.8
-
-
Collins III, J.J.1
Hou, X.2
Romanova, E.V.3
Lambrus, B.G.4
Miller, C.M.5
Saberi, A.6
Sweedler, J.V.7
Newmark, P.A.8
-
12
-
-
84859745358
-
A Lissencephaly-1 homologue is essential for mitotic progression in the planarian Schmidtea mediterranea
-
Cowles, M. W., Hubert, A. and Zayas, R. M. (2012). A Lissencephaly-1 homologue is essential for mitotic progression in the planarian Schmidtea mediterranea. Dev. Dyn. 241, 901-910.
-
(2012)
Dev. Dyn.
, vol.241
, pp. 901-910
-
-
Cowles, M.W.1
Hubert, A.2
Zayas, R.M.3
-
13
-
-
39249084202
-
Control of multidendritic neuron differentiation in Drosophila: The role of Collier
-
Crozatier, M. and Vincent, A. (2008). Control of multidendritic neuron differentiation in Drosophila: the role of Collier. Dev. Biol. 315, 232-242.
-
(2008)
Dev. Biol.
, vol.315
, pp. 232-242
-
-
Crozatier, M.1
Vincent, A.2
-
14
-
-
84881602357
-
Transcription factors lhx1/5-1 and pitx are required for the maintenance and regeneration of serotonergic neurons in planarians
-
Currie, K. W. and Pearson, B. J. (2013). Transcription factors lhx1/5-1 and pitx are required for the maintenance and regeneration of serotonergic neurons in planarians. Development 140, 3577-3588.
-
(2013)
Development
, vol.140
, pp. 3577-3588
-
-
Currie, K.W.1
Pearson, B.J.2
-
15
-
-
79959221582
-
Coe genes are expressed in differentiating neurons in the central nervous system of protostomes
-
Demilly, A., Simionato, E., Ohayon, D., Kerner, P., Garcès, A. and Vervoort, M. (2011). Coe genes are expressed in differentiating neurons in the central nervous system of protostomes. PLoS ONE 6, e21213.
-
(2011)
PLoS ONE
, vol.6
-
-
Demilly, A.1
Simionato, E.2
Ohayon, D.3
Kerner, P.4
Garcès, A.5
Vervoort, M.6
-
16
-
-
0034824528
-
The COE-Collier/Olf1/EBF-transcription factors: Structural conservation and diversity of developmental functions
-
Dubois, L. and Vincent, A. (2001). The COE-Collier/Olf1/EBF-transcription factors: structural conservation and diversity of developmental functions. Mech. Dev. 108, 3-12.
-
(2001)
Mech. Dev.
, vol.108
, pp. 3-12
-
-
Dubois, L.1
Vincent, A.2
-
17
-
-
0032510040
-
XCoe2, a transcription factor of the Col/Olf-1/EBF family involved in the specification of primary neurons in Xenopus
-
Dubois, L., Bally-Cuif, L., Crozatier, M., Moreau, J., Paquereau, L. and Vincent, A. (1998). XCoe2, a transcription factor of the Col/Olf-1/EBF family involved in the specification of primary neurons in Xenopus. Curr. Biol. 8, 199-209.
-
(1998)
Curr. Biol.
, vol.8
, pp. 199-209
-
-
Dubois, L.1
Bally-Cuif, L.2
Crozatier, M.3
Moreau, J.4
Paquereau, L.5
Vincent, A.6
-
18
-
-
33746940777
-
The zebrafish bHLH PAS transcriptional regulator, single-minded 1 (sim1), is required for isotocin cell development
-
Eaton, J. L. and Glasgow, E. (2006). The zebrafish bHLH PAS transcriptional regulator, single-minded 1 (sim1), is required for isotocin cell development. Dev. Dyn. 235, 2071-2082.
-
(2006)
Dev. Dyn.
, vol.235
, pp. 2071-2082
-
-
Eaton, J.L.1
Glasgow, E.2
-
19
-
-
51049089115
-
Molecular analysis of stem cells and their descendants during cell turnover and regeneration in the planarian Schmidtea mediterranea
-
Eisenhoffer, G. T., Kang, H. and Sánchez Alvarado, A. (2008). Molecular analysis of stem cells and their descendants during cell turnover and regeneration in the planarian Schmidtea mediterranea. Cell Stem Cell 3, 327-339.
-
(2008)
Cell Stem Cell
, vol.3
, pp. 327-339
-
-
Eisenhoffer, G.T.1
Kang, H.2
Sánchez Alvarado, A.3
-
20
-
-
84886300075
-
The history and enduring contributions of planarians to the study of animal regeneration
-
Elliott, S. A. and Sánchez Alvarado, A. (2013). The history and enduring contributions of planarians to the study of animal regeneration. Wiley Interdiscip. Rev. Dev. Biol. 2, 301-326.
-
(2013)
Wiley Interdiscip. Rev. Dev. Biol.
, vol.2
, pp. 301-326
-
-
Elliott, S.A.1
Sánchez Alvarado, A.2
-
21
-
-
77952416108
-
The TALE class homeobox gene Smedprep defines the anterior compartment for head regeneration
-
Felix, D. A. and Aboobaker, A. A. (2010). The TALE class homeobox gene Smedprep defines the anterior compartment for head regeneration. PLoS Genet. 6, e1000915.
-
(2010)
PLoS Genet.
, vol.6
-
-
Felix, D.A.1
Aboobaker, A.A.2
-
22
-
-
79960561671
-
Stem cell-based growth, regeneration, and remodeling of the planarian intestine
-
Forsthoefel, D. J., Park, A. E. and Newmark, P. A. (2011). Stem cell-based growth, regeneration, and remodeling of the planarian intestine. Dev. Biol. 356, 445-459.
-
(2011)
Dev. Biol.
, vol.356
, pp. 445-459
-
-
Forsthoefel, D.J.1
Park, A.E.2
Newmark, P.A.3
-
23
-
-
84867686201
-
An RNAi screen reveals intestinal regulators of branching morphogenesis, differentiation, and stem cell proliferation in planarians
-
Forsthoefel, D. J., James, N. P., Escobar, D. J., Stary, J. M., Vieira, A. P., Waters, F. A. and Newmark, P. A. (2012). An RNAi screen reveals intestinal regulators of branching morphogenesis, differentiation, and stem cell proliferation in planarians. Dev. Cell 23, 691-704.
-
(2012)
Dev. Cell
, vol.23
, pp. 691-704
-
-
Forsthoefel, D.J.1
James, N.P.2
Escobar, D.J.3
Stary, J.M.4
Vieira, A.P.5
Waters, F.A.6
Newmark, P.A.7
-
24
-
-
0036469896
-
Neurogenesis in the adult brain
-
Gage, F. H. (2002). Neurogenesis in the adult brain. J. Neurosci. 22, 612-613.
-
(2002)
J. Neurosci.
, vol.22
, pp. 612-613
-
-
Gage, F.H.1
-
25
-
-
67649840679
-
Origins of neurogenesis, a cnidarian view
-
Galliot, B., Quiquand, M., Ghila, L., de Rosa, R., Miljkovic-Licina, M. and Chera, S. (2009). Origins of neurogenesis, a cnidarian view. Dev. Biol. 332, 2-24.
-
(2009)
Dev. Biol.
, vol.332
, pp. 2-24
-
-
Galliot, B.1
Quiquand, M.2
Ghila, L.3
de Rosa, R.4
Miljkovic-Licina, M.5
Chera, S.6
-
26
-
-
0347519182
-
Ebf gene function is required for coupling neuronal differentiation and cell cycle exit
-
Garcia-Dominguez, M., Poquet, C., Garel, S. and Charnay, P. (2003). Ebf gene function is required for coupling neuronal differentiation and cell cycle exit. Development 130, 6013-6025.
-
(2003)
Development
, vol.130
, pp. 6013-6025
-
-
Garcia-Dominguez, M.1
Poquet, C.2
Garel, S.3
Charnay, P.4
-
27
-
-
0034521247
-
Control of the migratory pathway of facial branchiomotor neurones
-
Garel, S., Garcia-Dominguez, M. and Charnay, P. (2000). Control of the migratory pathway of facial branchiomotor neurones. Development 127, 5297-5307.
-
(2000)
Development
, vol.127
, pp. 5297-5307
-
-
Garel, S.1
Garcia-Dominguez, M.2
Charnay, P.3
-
28
-
-
78650873849
-
The planarian flatworm: An in vivo model for stem cell biology and nervous system regeneration
-
Gentile, L., Cebrià, F. and Bartscherer, K. (2011). The planarian flatworm: an in vivo model for stem cell biology and nervous system regeneration. Dis. Model. Mech. 4, 12-19.
-
(2011)
Dis. Model. Mech.
, vol.4
, pp. 12-19
-
-
Gentile, L.1
Cebrià, F.2
Bartscherer, K.3
-
29
-
-
0034023140
-
Amos, a proneural gene for Drosophila olfactory sense organs that is regulated by lozenge
-
Goulding, S. E., zur Lage, P. and Jarman, A. P. (2000). Amos, a proneural gene for Drosophila olfactory sense organs that is regulated by lozenge. Neuron 25, 69-78.
-
(2000)
Neuron
, vol.25
, pp. 69-78
-
-
Goulding, S.E.1
Zur Lage, P.2
Jarman, A.P.3
-
30
-
-
84865847909
-
Amputation induces stem cell mobilization to sites of injury during planarian regeneration
-
Guedelhoefer, O. C., 4th and Sánchez Alvarado, A. (2012). Amputation induces stem cell mobilization to sites of injury during planarian regeneration. Development 139, 3510-3520.
-
(2012)
Development
, vol.139
, pp. 3510-3520
-
-
Guedelhoefer IV, O.C.1
Sánchez Alvarado, A.2
-
31
-
-
36549046563
-
Spatial and temporal specification of neural fates by transcription factor codes
-
Guillemot, F. (2007). Spatial and temporal specification of neural fates by transcription factor codes. Development 134, 3771-3780.
-
(2007)
Development
, vol.134
, pp. 3771-3780
-
-
Guillemot, F.1
-
32
-
-
38349179867
-
Beta-catenin defines head versus tail identity during planarian regeneration and homeostasis
-
Gurley, K. A., Rink, J. C. and Sánchez Alvarado, A. (2008). Beta-catenin defines head versus tail identity during planarian regeneration and homeostasis. Science 319, 323-327.
-
(2008)
Science
, vol.319
, pp. 323-327
-
-
Gurley, K.A.1
Rink, J.C.2
Sánchez Alvarado, A.3
-
33
-
-
10344264425
-
Hes genes regulate size, shape and histogenesis of the nervous system by control of the timing of neural stem cell differentiation
-
Hatakeyama, J., Bessho, Y., Katoh, K., Ookawara, S., Fujioka, M., Guillemot, F. and Kageyama, R. (2004). Hes genes regulate size, shape and histogenesis of the nervous system by control of the timing of neural stem cell differentiation. Development 131, 5539-5550.
-
(2004)
Development
, vol.131
, pp. 5539-5550
-
-
Hatakeyama, J.1
Bessho, Y.2
Katoh, K.3
Ookawara, S.4
Fujioka, M.5
Guillemot, F.6
Kageyama, R.7
-
34
-
-
34548460311
-
Selective expression of Knot/Collier, a transcriptional regulator of the EBF/Olf-1 family, endows the Drosophila sensory system with neuronal class-specific elaborated dendritic patterns
-
Hattori, Y., Sugimura, K. and Uemura, T. (2007). Selective expression of Knot/Collier, a transcriptional regulator of the EBF/Olf-1 family, endows the Drosophila sensory system with neuronal class-specific elaborated dendritic patterns. Genes Cells 12, 1011-1022.
-
(2007)
Genes Cells
, vol.12
, pp. 1011-1022
-
-
Hattori, Y.1
Sugimura, K.2
Uemura, T.3
-
35
-
-
0034848658
-
One-, two-, and three-color whole-mount in situ hybridization to Drosophila embryos
-
Hauptmann, G. (2001). One-, two-, and three-color whole-mount in situ hybridization to Drosophila embryos. Methods 23, 359-372.
-
(2001)
Methods
, vol.23
, pp. 359-372
-
-
Hauptmann, G.1
-
36
-
-
0034026869
-
The proneural gene amos promotes multiple dendritic neuron formation in the Drosophila peripheral nervous system
-
Huang, M. L., Hsu, C. H. and Chien, C. T. (2000). The proneural gene amos promotes multiple dendritic neuron formation in the Drosophila peripheral nervous system. Neuron 25, 57-67.
-
(2000)
Neuron
, vol.25
, pp. 57-67
-
-
Huang, M.L.1
Hsu, C.H.2
Chien, C.T.3
-
37
-
-
84872034966
-
Epigenetic regulation of planarian stem cells by the SET1/MLL family of histone methyltransferases
-
Hubert, A., Henderson, J. M., Ross, K. G., Cowles, M. W., Torres, J. and Zayas, R. M. (2013). Epigenetic regulation of planarian stem cells by the SET1/MLL family of histone methyltransferases. Epigenetics 8, 79-91.
-
(2013)
Epigenetics
, vol.8
, pp. 79-91
-
-
Hubert, A.1
Henderson, J.M.2
Ross, K.G.3
Cowles, M.W.4
Torres, J.5
Zayas, R.M.6
-
38
-
-
81155161904
-
Early planarian brain regeneration is independent of blastema polarity mediated by the Wnt/β-catenin pathway
-
Iglesias, M., Almuedo-Castillo, M., Aboobaker, A. A. and Saló, E. (2011). Early planarian brain regeneration is independent of blastema polarity mediated by the Wnt/β-catenin pathway. Dev. Biol. 358, 68-78.
-
(2011)
Dev. Biol.
, vol.358
, pp. 68-78
-
-
Iglesias, M.1
Almuedo-Castillo, M.2
Aboobaker, A.A.3
Saló, E.4
-
39
-
-
0029595271
-
Targeted disruption of mammalian hairy and Enhancer of split homolog-1 (HES-1) leads to up-regulation of neural helix-loop-helix factors, premature neurogenesis, and severe neural tube defects
-
Ishibashi, M., Ang, S. L., Shiota, K., Nakanishi, S., Kageyama, R. and Guillemot, F. (1995). Targeted disruption of mammalian hairy and Enhancer of split homolog-1 (HES-1) leads to up-regulation of neural helix-loop-helix factors, premature neurogenesis, and severe neural tube defects. Genes Dev. 9, 3136-3148.
-
(1995)
Genes Dev.
, vol.9
, pp. 3136-3148
-
-
Ishibashi, M.1
Ang, S.L.2
Shiota, K.3
Nakanishi, S.4
Kageyama, R.5
Guillemot, F.6
-
40
-
-
0027955819
-
Neuronal cell fate specification in Drosophila
-
Jan, Y. N. and Jan, L. Y. (1994). Neuronal cell fate specification in Drosophila. Curr. Opin. Neurobiol. 4, 8-13.
-
(1994)
Curr. Opin. Neurobiol.
, vol.4
, pp. 8-13
-
-
Jan, Y.N.1
Jan, L.Y.2
-
41
-
-
37049025567
-
Knot/Collier and cut control different aspects of dendrite cytoskeleton and synergize to define final arbor shape
-
Jinushi-Nakao, S., Arvind, R., Amikura, R., Kinameri, E., Liu, A. W. and Moore, A. W. (2007). Knot/Collier and cut control different aspects of dendrite cytoskeleton and synergize to define final arbor shape. Neuron 56, 963-978.
-
(2007)
Neuron
, vol.56
, pp. 963-978
-
-
Jinushi-Nakao, S.1
Arvind, R.2
Amikura, R.3
Kinameri, E.4
Liu, A.W.5
Moore, A.W.6
-
42
-
-
44249090065
-
Roles of Hes genes in neural development
-
Kageyama, R., Ohtsuka, T. and Kobayashi, T. (2008). Roles of Hes genes in neural development. Dev. Growth Differ. 50 Suppl., S97-S103.
-
(2008)
Dev. Growth Differ.
, vol.50
, Issue.SUPPL.
-
-
Kageyama, R.1
Ohtsuka, T.2
Kobayashi, T.3
-
43
-
-
33747590622
-
-
New York, NY, USA: Oxford University Press
-
Kempermann, G. (2011). Adult Neurogenesis. New York, NY, USA: Oxford University Press.
-
(2011)
Adult Neurogenesis
-
-
Kempermann, G.1
-
44
-
-
84866531932
-
New neurons for 'survival of the fittest'
-
Kempermann, G. (2012). New neurons for 'survival of the fittest'. Nat. Rev. Neurosci. 13, 727-736.
-
(2012)
Nat. Rev. Neurosci.
, vol.13
, pp. 727-736
-
-
Kempermann, G.1
-
45
-
-
0345708353
-
The mammalian basic helix-loop-helix/PAS family of transcriptional regulators
-
Kewley, R. J., Whitelaw, M. L. and Chapman-Smith, A. (2004). The mammalian basic helix-loop-helix/PAS family of transcriptional regulators. Int. J. Biochem. Cell Biol. 36, 189-204.
-
(2004)
Int. J. Biochem. Cell Biol.
, vol.36
, pp. 189-204
-
-
Kewley, R.J.1
Whitelaw, M.L.2
Chapman-Smith, A.3
-
46
-
-
84859966322
-
The cell biology of regeneration
-
King, R. S. and Newmark, P. A. (2012). The cell biology of regeneration. J. Cell Biol. 196, 553-562.
-
(2012)
J. Cell Biol.
, vol.196
, pp. 553-562
-
-
King, R.S.1
Newmark, P.A.2
-
47
-
-
0036469897
-
Neurogenesis in embryos and in adult neural stem cells
-
Kintner, C. (2002). Neurogenesis in embryos and in adult neural stem cells. J. Neurosci. 22, 639-643.
-
(2002)
J. Neurosci.
, vol.22
, pp. 639-643
-
-
Kintner, C.1
-
48
-
-
84856254786
-
Coordinated regulation of cholinergic motor neuron traits through a conserved terminal selector gene
-
Kratsios, P., Stolfi, A., Levine, M. and Hobert, O. (2012). Coordinated regulation of cholinergic motor neuron traits through a conserved terminal selector gene. Nat. Neurosci. 15, 205-214.
-
(2012)
Nat. Neurosci.
, vol.15
, pp. 205-214
-
-
Kratsios, P.1
Stolfi, A.2
Levine, M.3
Hobert, O.4
-
49
-
-
84856090845
-
Lineage tracing
-
Kretzschmar, K. and Watt, F. M. (2012). Lineage tracing. Cell 148, 33-45.
-
(2012)
Cell
, vol.148
, pp. 33-45
-
-
Kretzschmar, K.1
Watt, F.M.2
-
50
-
-
84864376995
-
A comparative transcriptomic analysis reveals conserved features of stem cell pluripotency in planarians and mammals
-
Labbé, R. M., Irimia, M., Currie, K. W., Lin, A., Zhu, S. J., Brown, D. D., Ross, E. J., Voisin, V., Bader, G. D., Blencowe, B. J. et al. (2012). A comparative transcriptomic analysis reveals conserved features of stem cell pluripotency in planarians and mammals. Stem Cells 30, 1734-1745.
-
(2012)
Stem Cells
, vol.30
, pp. 1734-1745
-
-
Labbé, R.M.1
Irimia, M.2
Currie, K.W.3
Lin, A.4
Zhu, S.J.5
Brown, D.D.6
Ross, E.J.7
Voisin, V.8
Bader, G.D.9
Blencowe, B.J.10
-
51
-
-
80052333516
-
dlx and sp6-9 Control optic cup regeneration in a prototypic eye
-
Lapan, S. W. and Reddien, P. W. (2011). dlx and sp6-9 Control optic cup regeneration in a prototypic eye. PLoS Genet. 7, e1002226.
-
(2011)
PLoS Genet.
, vol.7
-
-
Lapan, S.W.1
Reddien, P.W.2
-
52
-
-
84865798210
-
Transcriptome analysis of the planarian eye identifies ovo as a specific regulator of eye regeneration
-
Lapan, S. W. and Reddien, P. W. (2012). Transcriptome analysis of the planarian eye identifies ovo as a specific regulator of eye regeneration. Cell Rep. 2, 294-307.
-
(2012)
Cell Rep.
, vol.2
, pp. 294-307
-
-
Lapan, S.W.1
Reddien, P.W.2
-
53
-
-
79959795419
-
Two-color fluorescent in situ hybridization in the embryonic zebrafish brain using differential detection systems
-
Lauter, G., Söll, I. and Hauptmann, G. (2011). Two-color fluorescent in situ hybridization in the embryonic zebrafish brain using differential detection systems. BMC Dev. Biol. 11, 43.
-
(2011)
BMC Dev. Biol.
, vol.11
, pp. 43
-
-
Lauter, G.1
Söll, I.2
Hauptmann, G.3
-
54
-
-
0004259642
-
-
New Haven, CT, USA: Yale University Press
-
Lentz, T. L. (1968). Primitive Nervous Systems. New Haven, CT, USA: Yale University Press.
-
(1968)
Primitive Nervous Systems
-
-
Lentz, T.L.1
-
55
-
-
73849134426
-
Emerging roles of the EBF family of transcription factors in tumor suppression
-
Liao, D. (2009). Emerging roles of the EBF family of transcription factors in tumor suppression. Mol. Cancer Res. 7, 1893-1901.
-
(2009)
Mol. Cancer Res.
, vol.7
, pp. 1893-1901
-
-
Liao, D.1
-
56
-
-
33846276536
-
A comparative framework for understanding the biological principles of adult neurogenesis
-
Lindsey, B. W. and Tropepe, V. (2006). A comparative framework for understanding the biological principles of adult neurogenesis. Prog. Neurobiol. 80, 281-307.
-
(2006)
Prog. Neurobiol.
, vol.80
, pp. 281-307
-
-
Lindsey, B.W.1
Tropepe, V.2
-
57
-
-
0032532480
-
Development of neuroendocrine lineages requires the bHLH-PAS transcription factor SIM1
-
Michaud, J. L., Rosenquist, T., May, N. R. and Fan, C. M. (1998). Development of neuroendocrine lineages requires the bHLH-PAS transcription factor SIM1. Genes Dev. 12, 3264-3275.
-
(1998)
Genes Dev.
, vol.12
, pp. 3264-3275
-
-
Michaud, J.L.1
Rosenquist, T.2
May, N.R.3
Fan, C.M.4
-
58
-
-
0026314893
-
The Drosophila single-minded gene encodes a helix-loop-helix protein that acts as a master regulator of CNS midline development
-
Nambu, J. R., Lewis, J. O., Wharton, K. A., Jr and Crews, S. T. (1991). The Drosophila single-minded gene encodes a helix-loop-helix protein that acts as a master regulator of CNS midline development. Cell 67, 1157-1167.
-
(1991)
Cell
, vol.67
, pp. 1157-1167
-
-
Nambu, J.R.1
Lewis, J.O.2
Wharton Jr., K.A.3
Crews, S.T.4
-
59
-
-
0342369613
-
Bromodeoxyuridine specifically labels the regenerative stem cells of planarians
-
Newmark, P. A. and Sánchez Alvarado, A. (2000). Bromodeoxyuridine specifically labels the regenerative stem cells of planarians. Dev. Biol. 220, 142-153.
-
(2000)
Dev. Biol.
, vol.220
, pp. 142-153
-
-
Newmark, P.A.1
Sánchez Alvarado, A.2
-
60
-
-
68549140377
-
Germ cell specification and regeneration in planarians
-
Newmark, P. A., Wang, Y. and Chong, T. (2008). Germ cell specification and regeneration in planarians. Cold Spring Harb. Symp. Quant. Biol. 73, 573-581.
-
(2008)
Cold Spring Harb. Symp. Quant. Biol.
, vol.73
, pp. 573-581
-
-
Newmark, P.A.1
Wang, Y.2
Chong, T.3
-
61
-
-
0034623005
-
T-Coffee: A novel method for fast and accurate multiple sequence alignment
-
Notredame, C., Higgins, D. G. and Heringa, J. (2000). T-Coffee: a novel method for fast and accurate multiple sequence alignment. J. Mol. Biol. 302, 205-217.
-
(2000)
J. Mol. Biol.
, vol.302
, pp. 205-217
-
-
Notredame, C.1
Higgins, D.G.2
Heringa, J.3
-
62
-
-
84862214826
-
Gene expression of pluripotency determinants is conserved between mammalian and planarian stem cells
-
Önal, P., Grün, D., Adamidi, C., Rybak, A., Solana, J., Mastrobuoni, G., Wang, Y., Rahn, H. P., Chen, W., Kempa, S. et al. (2012). Gene expression of pluripotency determinants is conserved between mammalian and planarian stem cells. EMBO J. 31, 2755-2769.
-
(2012)
EMBO J.
, vol.31
, pp. 2755-2769
-
-
Önal, P.1
Grün, D.2
Adamidi, C.3
Rybak, A.4
Solana, J.5
Mastrobuoni, G.6
Wang, Y.7
Rahn, H.P.8
Chen, W.9
Kempa, S.10
-
63
-
-
59649084941
-
Formaldehyde-based whole-mount in situ hybridization method for planarians
-
Pearson, B. J., Eisenhoffer, G. T., Gurley, K. A., Rink, J. C., Miller, D. E. and Sánchez Alvarado, A. (2009). Formaldehyde-based whole-mount in situ hybridization method for planarians. Dev. Dyn. 238, 443-450.
-
(2009)
Dev. Dyn.
, vol.238
, pp. 443-450
-
-
Pearson, B.J.1
Eisenhoffer, G.T.2
Gurley, K.A.3
Rink, J.C.4
Miller, D.E.5
Sánchez Alvarado, A.6
-
64
-
-
0035873574
-
Xebf3 is a regulator of neuronal differentiation during primary neurogenesis in Xenopus
-
Pozzoli, O., Bosetti, A., Croci, L., Consalez, G. G. and Vetter, M. L. (2001). Xebf3 is a regulator of neuronal differentiation during primary neurogenesis in Xenopus. Dev. Biol. 233, 495-512.
-
(2001)
Dev. Biol.
, vol.233
, pp. 495-512
-
-
Pozzoli, O.1
Bosetti, A.2
Croci, L.3
Consalez, G.G.4
Vetter, M.L.5
-
65
-
-
0031840035
-
unc-3, a gene required for axonal guidance in Caenorhabditis elegans, encodes a member of the O/E family of transcription factors
-
Prasad, B. C., Ye, B., Zackhary, R., Schrader, K., Seydoux, G. and Reed, R. R. (1998). unc-3, a gene required for axonal guidance in Caenorhabditis elegans, encodes a member of the O/E family of transcription factors. Development 125, 1561-1568.
-
(1998)
Development
, vol.125
, pp. 1561-1568
-
-
Prasad, B.C.1
Ye, B.2
Zackhary, R.3
Schrader, K.4
Seydoux, G.5
Reed, R.R.6
-
66
-
-
0031041307
-
Two murine homologs of the Drosophila single-minded protein that interact with the mouse aryl hydrocarbon receptor nuclear translocator protein
-
Probst, M. R., Fan, C. M., Tessier-Lavigne, M. and Hankinson, O. (1997). Two murine homologs of the Drosophila single-minded protein that interact with the mouse aryl hydrocarbon receptor nuclear translocator protein. J. Biol. Chem. 272, 4451-4457.
-
(1997)
J. Biol. Chem.
, vol.272
, pp. 4451-4457
-
-
Probst, M.R.1
Fan, C.M.2
Tessier-Lavigne, M.3
Hankinson, O.4
-
68
-
-
84873741792
-
Specialized progenitors and regeneration
-
Reddien, P. W. (2013). Specialized progenitors and regeneration. Development 140, 951-957.
-
(2013)
Development
, vol.140
, pp. 951-957
-
-
Reddien, P.W.1
-
69
-
-
17844395204
-
Identification of genes needed for regeneration, stem cell function, and tissue homeostasis by systematic gene perturbation in planaria
-
Reddien, P. W., Bermange, A. L., Murfitt, K. J., Jennings, J. R. and Sánchez Alvarado, A. (2005a). Identification of genes needed for regeneration, stem cell function, and tissue homeostasis by systematic gene perturbation in planaria. Dev. Cell 8, 635-649.
-
(2005)
Dev. Cell
, vol.8
, pp. 635-649
-
-
Reddien, P.W.1
Bermange, A.L.2
Murfitt, K.J.3
Jennings, J.R.4
Sánchez Alvarado, A.5
-
70
-
-
28144464878
-
SMEDWI-2 is a PIWI-like protein that regulates planarian stem cells
-
Reddien, P. W., Oviedo, N. J., Jennings, J. R., Jenkin, J. C. and Sánchez Alvarado, A. (2005b). SMEDWI-2 is a PIWI-like protein that regulates planarian stem cells. Science 310, 1327-1330.
-
(2005)
Science
, vol.310
, pp. 1327-1330
-
-
Reddien, P.W.1
Oviedo, N.J.2
Jennings, J.R.3
Jenkin, J.C.4
Sánchez Alvarado, A.5
-
71
-
-
84859355786
-
Transcriptome analysis reveals strain-specific and conserved stemness genes in Schmidtea mediterranea
-
Resch, A. M., Palakodeti, D., Lu, Y. C., Horowitz, M. and Graveley, B. R. (2012). Transcriptome analysis reveals strain-specific and conserved stemness genes in Schmidtea mediterranea. PLoS ONE 7, e34447.
-
(2012)
PLoS ONE
, vol.7
-
-
Resch, A.M.1
Palakodeti, D.2
Lu, Y.C.3
Horowitz, M.4
Graveley, B.R.5
-
72
-
-
79955391920
-
Direct in vivo cellular reprogramming involves transition through discrete, non-pluripotent steps
-
Richard, J. P., Zuryn, S., Fischer, N., Pavet, V., Vaucamps, N. and Jarriault, S. (2011). Direct in vivo cellular reprogramming involves transition through discrete, non-pluripotent steps. Development 138, 1483-1492.
-
(2011)
Development
, vol.138
, pp. 1483-1492
-
-
Richard, J.P.1
Zuryn, S.2
Fischer, N.3
Pavet, V.4
Vaucamps, N.5
Jarriault, S.6
-
73
-
-
52249111368
-
Sponge genes provide new insight into the evolutionary origin of the neurogenic circuit
-
Richards, G. S., Simionato, E., Perron, M., Adamska, M., Vervoort, M. and Degnan, B. M. (2008). Sponge genes provide new insight into the evolutionary origin of the neurogenic circuit. Curr. Biol. 18, 1156-1161.
-
(2008)
Curr. Biol.
, vol.18
, pp. 1156-1161
-
-
Richards, G.S.1
Simionato, E.2
Perron, M.3
Adamska, M.4
Vervoort, M.5
Degnan, B.M.6
-
74
-
-
84872946712
-
Stem cell systems and regeneration in planaria
-
Rink, J. C. (2013). Stem cell systems and regeneration in planaria. Dev. Genes Evol. 223, 67-84.
-
(2013)
Dev. Genes Evol.
, vol.223
, pp. 67-84
-
-
Rink, J.C.1
-
76
-
-
80053087577
-
A regulatory program for excretory system regeneration in planarians
-
Scimone, M. L., Srivastava, M., Bell, G. W. and Reddien, P. W. (2011). A regulatory program for excretory system regeneration in planarians. Development 138, 4387-4398.
-
(2011)
Development
, vol.138
, pp. 4387-4398
-
-
Scimone, M.L.1
Srivastava, M.2
Bell, G.W.3
Reddien, P.W.4
-
77
-
-
33947252158
-
Origin and diversification of the basic helix-loop-helix gene family in metazoans: Insights from comparative genomics
-
Simionato, E., Ledent, V., Richards, G., Thomas-Chollier, M., Kerner, P., Coornaert, D., Degnan, B. M. and Vervoort, M. (2007). Origin and diversification of the basic helix-loop-helix gene family in metazoans: insights from comparative genomics. BMC Evol. Biol. 7, 33.
-
(2007)
BMC Evol. Biol.
, vol.7
, pp. 33
-
-
Simionato, E.1
Ledent, V.2
Richards, G.3
Thomas-Chollier, M.4
Kerner, P.5
Coornaert, D.6
Degnan, B.M.7
Vervoort, M.8
-
78
-
-
84858724123
-
Defining the molecular profile of planarian pluripotent stem cells using a combinatorial RNAseq, RNA interference and irradiation approach
-
Solana, J., Kao, D., Mihaylova, Y., Jaber-Hijazi, F., Malla, S., Wilson, R. and Aboobaker, A. (2012). Defining the molecular profile of planarian pluripotent stem cells using a combinatorial RNAseq, RNA interference and irradiation approach. Genome Biol. 13, R19.
-
(2012)
Genome Biol.
, vol.13
-
-
Solana, J.1
Kao, D.2
Mihaylova, Y.3
Jaber-Hijazi, F.4
Malla, S.5
Wilson, R.6
Aboobaker, A.7
-
79
-
-
80052981801
-
Regeneration in an evolutionarily primitive brain-the planarian Dugesia japonica model
-
Umesono, Y., Tasaki, J., Nishimura, K., Inoue, T. and Agata, K. (2011). Regeneration in an evolutionarily primitive brain-the planarian Dugesia japonica model. Eur. J. Neurosci. 34, 863-869.
-
(2011)
Eur. J. Neurosci.
, vol.34
, pp. 863-869
-
-
Umesono, Y.1
Tasaki, J.2
Nishimura, K.3
Inoue, T.4
Agata, K.5
-
80
-
-
77957656702
-
A prominent requirement for single-minded and the ventral midline in patterning the dorsoventral axis of the crustacean Parhyale hawaiensis
-
Vargas-Vila, M. A., Hannibal, R. L., Parchem, R. J., Liu, P. Z. and Patel, N. H. (2010). A prominent requirement for single-minded and the ventral midline in patterning the dorsoventral axis of the crustacean Parhyale hawaiensis. Development 137, 3469-3476.
-
(2010)
Development
, vol.137
, pp. 3469-3476
-
-
Vargas-Vila, M.A.1
Hannibal, R.L.2
Parchem, R.J.3
Liu, P.Z.4
Patel, N.H.5
-
81
-
-
79955985703
-
Clonogenic neoblasts are pluripotent adult stem cells that underlie planarian regeneration
-
Wagner, D. E., Wang, I. E. and Reddien, P. W. (2011). Clonogenic neoblasts are pluripotent adult stem cells that underlie planarian regeneration. Science 332, 811-816.
-
(2011)
Science
, vol.332
, pp. 811-816
-
-
Wagner, D.E.1
Wang, I.E.2
Reddien, P.W.3
-
82
-
-
0030764519
-
Genes that guide growth cones along the C. elegans ventral nerve cord
-
Wightman, B., Baran, R. and Garriga, G. (1997). Genes that guide growth cones along the C. elegans ventral nerve cord. Development 124, 2571-2580.
-
(1997)
Development
, vol.124
, pp. 2571-2580
-
-
Wightman, B.1
Baran, R.2
Garriga, G.3
-
83
-
-
34250804337
-
Allocation of paraventricular and supraoptic neurons requires Sim1 function: A role for a Sim1 downstream gene PlexinC1
-
Xu, C. and Fan, C. M. (2007). Allocation of paraventricular and supraoptic neurons requires Sim1 function: a role for a Sim1 downstream gene PlexinC1. Mol. Endocrinol. 21, 1234-1245.
-
(2007)
Mol. Endocrinol.
, vol.21
, pp. 1234-1245
-
-
Xu, C.1
Fan, C.M.2
-
84
-
-
29444436838
-
The planarian Schmidtea mediterranea as a model for epigenetic germ cell specification: Analysis of ESTs from the hermaphroditic strain
-
Zayas, R. M., Hernández, A., Habermann, B., Wang, Y., Stary, J. M. and Newmark, P. A. (2005). The planarian Schmidtea mediterranea as a model for epigenetic germ cell specification: analysis of ESTs from the hermaphroditic strain. Proc. Natl. Acad. Sci. USA 102, 18491-18496.
-
(2005)
Proc. Natl. Acad. Sci. USA
, vol.102
, pp. 18491-18496
-
-
Zayas, R.M.1
Hernández, A.2
Habermann, B.3
Wang, Y.4
Stary, J.M.5
Newmark, P.A.6
-
85
-
-
84871707114
-
The Retinoblastoma pathway regulates stem cell proliferation in freshwater planarians
-
Zhu, S. J. and Pearson, B. J. (2013). The Retinoblastoma pathway regulates stem cell proliferation in freshwater planarians. Dev. Biol. 373, 442-452.
-
(2013)
Dev. Biol.
, vol.373
, pp. 442-452
-
-
Zhu, S.J.1
Pearson, B.J.2
|