-
1
-
-
77749282898
-
The global burden of nontyphoidal Salmonella gastroenteritis
-
10.1086/650733, 20158401
-
Majowicz SE, Musto J, Scallan E, Angulo FJ, Kirk M, O'Brien SJ, Jones TF, Fazil A, Hoekstra RM. The global burden of nontyphoidal Salmonella gastroenteritis. Clin Infect Dis 2010, 50(6):882-889. 10.1086/650733, 20158401.
-
(2010)
Clin Infect Dis
, vol.50
, Issue.6
, pp. 882-889
-
-
Majowicz, S.E.1
Musto, J.2
Scallan, E.3
Angulo, F.J.4
Kirk, M.5
O'Brien, S.J.6
Jones, T.F.7
Fazil, A.8
Hoekstra, R.M.9
-
2
-
-
79960546349
-
Global monitoring of Salmonella serovar distribution from the World Health Organization Global Foodborne Infections Network Country Data Bank: results of quality assured laboratories from 2001 to 2007
-
10.1089/fpd.2010.0787, 21492021
-
Hendriksen RS, Vieira AR, Karlsmose S, Lo Fo Wong DM, Jensen AB, Wegener HC, Aarestrup FM. Global monitoring of Salmonella serovar distribution from the World Health Organization Global Foodborne Infections Network Country Data Bank: results of quality assured laboratories from 2001 to 2007. Foodborne Pathog Dis 2011, 8(8):887-900. 10.1089/fpd.2010.0787, 21492021.
-
(2011)
Foodborne Pathog Dis
, vol.8
, Issue.8
, pp. 887-900
-
-
Hendriksen, R.S.1
Vieira, A.R.2
Karlsmose, S.3
Lo Fo Wong, D.M.4
Jensen, A.B.5
Wegener, H.C.6
Aarestrup, F.M.7
-
4
-
-
84859027209
-
Improving resolution of public health surveillance for human Salmonella enterica serovar Typhimurium infection: 3 years of prospective multiple-locus variable-number tandem-repeat analysis (MLVA)
-
10.1186/1471-2334-12-78, 3368731, 22462487
-
Sintchenko V, Wang Q, Howard P, Ha CW, Kardamanidis K, Musto J, Gilbert GL. Improving resolution of public health surveillance for human Salmonella enterica serovar Typhimurium infection: 3 years of prospective multiple-locus variable-number tandem-repeat analysis (MLVA). BMC Infect Dis 2012, 12:78. 10.1186/1471-2334-12-78, 3368731, 22462487.
-
(2012)
BMC Infect Dis
, vol.12
, pp. 78
-
-
Sintchenko, V.1
Wang, Q.2
Howard, P.3
Ha, C.W.4
Kardamanidis, K.5
Musto, J.6
Gilbert, G.L.7
-
5
-
-
77952308281
-
Monitoring the incidence and causes of diseases potentially transmitted by food in Australia: annual report of the OzFoodNet Network, 2008
-
OzFoodNet Working Group
-
OzFoodNet Working Group Monitoring the incidence and causes of diseases potentially transmitted by food in Australia: annual report of the OzFoodNet Network, 2008. Commun Dis Intell 2009, 33(4):389-413. OzFoodNet Working Group.
-
(2009)
Commun Dis Intell
, vol.33
, Issue.4
, pp. 389-413
-
-
-
6
-
-
79954613924
-
Salmonella in chicken meat, eggs and humans; Adelaide, South Australia, 2008
-
10.1016/j.ijfoodmicro.2011.02.004, 21429610
-
Fearnley E, Raupach J, Lagala F, Cameron S. Salmonella in chicken meat, eggs and humans; Adelaide, South Australia, 2008. Int J Food Microbiol 2011, 146(3):219-227. 10.1016/j.ijfoodmicro.2011.02.004, 21429610.
-
(2011)
Int J Food Microbiol
, vol.146
, Issue.3
, pp. 219-227
-
-
Fearnley, E.1
Raupach, J.2
Lagala, F.3
Cameron, S.4
-
7
-
-
0036043452
-
Outbreak of gastroenteritis due to Salmonella typhimurium phage type I 35a following consumption of raw egg
-
Hall R. Outbreak of gastroenteritis due to Salmonella typhimurium phage type I 35a following consumption of raw egg. Communicable diseases intelligence quarterly report 2002, 26(2):285-287.
-
(2002)
Communicable diseases intelligence quarterly report
, vol.26
, Issue.2
, pp. 285-287
-
-
Hall, R.1
-
8
-
-
0036371713
-
An outbreak of Salmonella typhimurium PTI35 gastroenteritis associated with a minimally cooked dessert containing raw eggs
-
Sarna M, Dowse G, Evans G, Guest C. An outbreak of Salmonella typhimurium PTI35 gastroenteritis associated with a minimally cooked dessert containing raw eggs. Communicable diseases intelligence quarterly report 2002, 26(1):32-37.
-
(2002)
Communicable diseases intelligence quarterly report
, vol.26
, Issue.1
, pp. 32-37
-
-
Sarna, M.1
Dowse, G.2
Evans, G.3
Guest, C.4
-
9
-
-
0036359503
-
An outbreak of Salmonella typhimurium phage type 135 infection linked to the consumption of raw shell eggs in an aged care facility
-
Tribe IG, Cowell D, Cameron P, Cameron S. An outbreak of Salmonella typhimurium phage type 135 infection linked to the consumption of raw shell eggs in an aged care facility. Communicable diseases intelligence quarterly report 2002, 26(1):38-39.
-
(2002)
Communicable diseases intelligence quarterly report
, vol.26
, Issue.1
, pp. 38-39
-
-
Tribe, I.G.1
Cowell, D.2
Cameron, P.3
Cameron, S.4
-
10
-
-
84888286282
-
-
Melbourne: Victorian Department of Human Services, Department of Health, Victoria
-
Department of Health, Victoria Surveillance of Notifiable Infectious Diseases in Victoria 2008 2009, 24. Melbourne: Victorian Department of Human Services, Department of Health, Victoria.
-
(2009)
Surveillance of Notifiable Infectious Diseases in Victoria 2008
, pp. 24
-
-
-
11
-
-
0141781174
-
An outbreak of Salmonella typhimurium phage type 135a in a child care centre
-
McCall BJ, Bell RJ, Neill AS, Micalizzi GR, Vakaci GR, Towner CD. An outbreak of Salmonella typhimurium phage type 135a in a child care centre. Communicable diseases intelligence quarterly report 2003, 27(2):257-259.
-
(2003)
Communicable diseases intelligence quarterly report
, vol.27
, Issue.2
, pp. 257-259
-
-
McCall, B.J.1
Bell, R.J.2
Neill, A.S.3
Micalizzi, G.R.4
Vakaci, G.R.5
Towner, C.D.6
-
12
-
-
65549115050
-
Recurring outbreaks of Salmonella typhimurium phage type 135 associated with the consumption of products containing raw egg in Tasmania
-
Stephens N, Coleman D, Shaw K. Recurring outbreaks of Salmonella typhimurium phage type 135 associated with the consumption of products containing raw egg in Tasmania. Commun Dis Intell 2008, 32(4):466-468.
-
(2008)
Commun Dis Intell
, vol.32
, Issue.4
, pp. 466-468
-
-
Stephens, N.1
Coleman, D.2
Shaw, K.3
-
13
-
-
34250634468
-
Large outbreaks of Salmonella Typhimurium phage type 135 infections associated with the consumption of products containing raw egg in Tasmania
-
Stephens N, Sault C, Firestone SM, Lightfoot D, Bell C. Large outbreaks of Salmonella Typhimurium phage type 135 infections associated with the consumption of products containing raw egg in Tasmania. Commun Dis Intell 2007, 31(1):118-124.
-
(2007)
Commun Dis Intell
, vol.31
, Issue.1
, pp. 118-124
-
-
Stephens, N.1
Sault, C.2
Firestone, S.M.3
Lightfoot, D.4
Bell, C.5
-
14
-
-
84888289490
-
-
Melbourne: Victorian Department of Human Services, Department of Health, Victoria
-
Department of Health, Victoria Surveillance of Notifiable Infectious Diseases in Victoria 1998 1999, 25. Melbourne: Victorian Department of Human Services, Department of Health, Victoria.
-
(1999)
Surveillance of Notifiable Infectious Diseases in Victoria 1998
, pp. 25
-
-
-
15
-
-
14644423047
-
-
Melbourne: Victorian Department of Human Services, Department of Health, Victoria
-
Department of Health, Victoria Surveillance of Notifiable Infectious Diseases in Victoria 2002 2003, 21-23. Melbourne: Victorian Department of Human Services, Department of Health, Victoria.
-
(2003)
Surveillance of Notifiable Infectious Diseases in Victoria 2002
, pp. 21-23
-
-
-
16
-
-
33947732336
-
A multi-jurisdiction outbreak of Salmonella Typhimurium phage type 135 associated with purchasing chicken meat from a supermarket chain
-
McPherson ME, Fielding JE, Telfer B, Stephens N, Combs BG, Rice BA, Fitzsimmons GJ, Gregory JE. A multi-jurisdiction outbreak of Salmonella Typhimurium phage type 135 associated with purchasing chicken meat from a supermarket chain. Communicable diseases intelligence quarterly report 2006, 30(4):449-455.
-
(2006)
Communicable diseases intelligence quarterly report
, vol.30
, Issue.4
, pp. 449-455
-
-
McPherson, M.E.1
Fielding, J.E.2
Telfer, B.3
Stephens, N.4
Combs, B.G.5
Rice, B.A.6
Fitzsimmons, G.J.7
Gregory, J.E.8
-
17
-
-
84997498636
-
Draft Genome Sequences for Ten Salmonella enterica Serovar Typhimurium Phage Type 135 Variants
-
3675509, 23792739
-
Hogg G, Dimovski K, Hiley L, Holt KE. Draft Genome Sequences for Ten Salmonella enterica Serovar Typhimurium Phage Type 135 Variants. Genome Announc 2013, 1(3):e00293-13. 3675509, 23792739.
-
(2013)
Genome Announc
, vol.1
, Issue.3
-
-
Hogg, G.1
Dimovski, K.2
Hiley, L.3
Holt, K.E.4
-
18
-
-
73649127936
-
Short-term signatures of evolutionary change in the Salmonella enterica serovar typhimurium 14028 genome
-
10.1128/JB.01233-09, 2805332, 19897643
-
Jarvik T, Smillie C, Groisman EA, Ochman H. Short-term signatures of evolutionary change in the Salmonella enterica serovar typhimurium 14028 genome. J Bacteriol 2010, 192(2):560-567. 10.1128/JB.01233-09, 2805332, 19897643.
-
(2010)
J Bacteriol
, vol.192
, Issue.2
, pp. 560-567
-
-
Jarvik, T.1
Smillie, C.2
Groisman, E.A.3
Ochman, H.4
-
19
-
-
79960435782
-
Complete genome sequence of the universal killer Salmonella enterica Serovar Typhimurium UK-1 (ATCC 68169)
-
10.1128/JB.05224-11, 3147501, 21622747
-
Luo Y, Kong Q, Yang J, Golden G, Wanda SY, Jensen RV, Ernst PB, Curtiss R. Complete genome sequence of the universal killer Salmonella enterica Serovar Typhimurium UK-1 (ATCC 68169). J Bacteriol 2011, 193(15):4035-4036. 10.1128/JB.05224-11, 3147501, 21622747.
-
(2011)
J Bacteriol
, vol.193
, Issue.15
, pp. 4035-4036
-
-
Luo, Y.1
Kong, Q.2
Yang, J.3
Golden, G.4
Wanda, S.Y.5
Jensen, R.V.6
Ernst, P.B.7
Curtiss, R.8
-
20
-
-
73249140740
-
Epidemic multiple drug resistant Salmonella Typhimurium causing invasive disease in sub-Saharan Africa have a distinct genotype
-
10.1101/gr.091017.109, 2792184, 19901036
-
Kingsley RA, Msefula CL, Thomson NR, Kariuki S, Holt KE, Gordon MA, Harris D, Clarke L, Whitehead S, Sangal V, et al. Epidemic multiple drug resistant Salmonella Typhimurium causing invasive disease in sub-Saharan Africa have a distinct genotype. Genome Res 2009, 19(12):2279-2287. 10.1101/gr.091017.109, 2792184, 19901036.
-
(2009)
Genome Res
, vol.19
, Issue.12
, pp. 2279-2287
-
-
Kingsley, R.A.1
Msefula, C.L.2
Thomson, N.R.3
Kariuki, S.4
Holt, K.E.5
Gordon, M.A.6
Harris, D.7
Clarke, L.8
Whitehead, S.9
Sangal, V.10
-
21
-
-
84865279579
-
Characterization and differential gene expression between two phenotypic phase variants in Salmonella enterica serovar Typhimurium
-
10.1371/journal.pone.0043592, 3427373, 22937065
-
Patterson SK, Borewicz K, Johnson T, Xu W, Isaacson RE. Characterization and differential gene expression between two phenotypic phase variants in Salmonella enterica serovar Typhimurium. PLoS One 2012, 7(8):e43592. 10.1371/journal.pone.0043592, 3427373, 22937065.
-
(2012)
PLoS One
, vol.7
, Issue.8
-
-
Patterson, S.K.1
Borewicz, K.2
Johnson, T.3
Xu, W.4
Isaacson, R.E.5
-
22
-
-
79958037599
-
Genome sequences of Salmonella enterica serovar typhimurium, Choleraesuis, Dublin, and Gallinarum strains of well- defined virulence in food-producing animals
-
10.1128/JB.00394-11, 3133203, 21478351
-
Richardson EJ, Limaye B, Inamdar H, Datta A, Manjari KS, Pullinger GD, Thomson NR, Joshi RR, Watson M, Stevens MP. Genome sequences of Salmonella enterica serovar typhimurium, Choleraesuis, Dublin, and Gallinarum strains of well- defined virulence in food-producing animals. J Bacteriol 2011, 193(12):3162-3163. 10.1128/JB.00394-11, 3133203, 21478351.
-
(2011)
J Bacteriol
, vol.193
, Issue.12
, pp. 3162-3163
-
-
Richardson, E.J.1
Limaye, B.2
Inamdar, H.3
Datta, A.4
Manjari, K.S.5
Pullinger, G.D.6
Thomson, N.R.7
Joshi, R.R.8
Watson, M.9
Stevens, M.P.10
-
23
-
-
0035950182
-
Complete genome sequence of Salmonella enterica serovar Typhimurium LT2
-
10.1038/35101614, 11677609
-
McClelland M, Sanderson KE, Spieth J, Clifton SW, Latreille P, Courtney L, Porwollik S, Ali J, Dante M, Du F, et al. Complete genome sequence of Salmonella enterica serovar Typhimurium LT2. Nature 2001, 413(6858):852-856. 10.1038/35101614, 11677609.
-
(2001)
Nature
, vol.413
, Issue.6858
, pp. 852-856
-
-
McClelland, M.1
Sanderson, K.E.2
Spieth, J.3
Clifton, S.W.4
Latreille, P.5
Courtney, L.6
Porwollik, S.7
Ali, J.8
Dante, M.9
Du, F.10
-
24
-
-
78751691839
-
Whole-genome analysis of Salmonella enterica serovar Typhimurium T000240 reveals the acquisition of a genomic island involved in multidrug resistance via IS1 derivatives on the chromosome
-
10.1128/AAC.01215-10, 3028819, 21098248
-
Izumiya H, Sekizuka T, Nakaya H, Taguchi M, Oguchi A, Ichikawa N, Nishiko R, Yamazaki S, Fujita N, Watanabe H, et al. Whole-genome analysis of Salmonella enterica serovar Typhimurium T000240 reveals the acquisition of a genomic island involved in multidrug resistance via IS1 derivatives on the chromosome. Antimicrob Agents Chemother 2011, 55(2):623-630. 10.1128/AAC.01215-10, 3028819, 21098248.
-
(2011)
Antimicrob Agents Chemother
, vol.55
, Issue.2
, pp. 623-630
-
-
Izumiya, H.1
Sekizuka, T.2
Nakaya, H.3
Taguchi, M.4
Oguchi, A.5
Ichikawa, N.6
Nishiko, R.7
Yamazaki, S.8
Fujita, N.9
Watanabe, H.10
-
25
-
-
84869126391
-
Draft genome sequence of Salmonella enterica serovar Typhimurium ST1660/06, a multidrug-resistant clinical strain isolated from a diarrheic patient
-
10.1128/JB.01593-12, 3486384, 23105062
-
Li L, Cheng CK, Cheung MK, Law PT, Ling JM, Kam KM, Cheung WM, Kwan HS. Draft genome sequence of Salmonella enterica serovar Typhimurium ST1660/06, a multidrug-resistant clinical strain isolated from a diarrheic patient. J Bacteriol 2012, 194(22):6319-6320. 10.1128/JB.01593-12, 3486384, 23105062.
-
(2012)
J Bacteriol
, vol.194
, Issue.22
, pp. 6319-6320
-
-
Li, L.1
Cheng, C.K.2
Cheung, M.K.3
Law, P.T.4
Ling, J.M.5
Kam, K.M.6
Cheung, W.M.7
Kwan, H.S.8
-
26
-
-
84868201561
-
Intracontinental spread of human invasive Salmonella Typhimurium pathovariants in sub-Saharan Africa
-
10.1038/ng.2423, 3491877, 23023330
-
Okoro CK, Kingsley RA, Connor TR, Harris SR, Parry CM, Al-Mashhadani MN, Kariuki S, Msefula CL, Gordon MA, de Pinna E, et al. Intracontinental spread of human invasive Salmonella Typhimurium pathovariants in sub-Saharan Africa. Nat Genet 2012, 44(11):1215-1221. 10.1038/ng.2423, 3491877, 23023330.
-
(2012)
Nat Genet
, vol.44
, Issue.11
, pp. 1215-1221
-
-
Okoro, C.K.1
Kingsley, R.A.2
Connor, T.R.3
Harris, S.R.4
Parry, C.M.5
Al-Mashhadani, M.N.6
Kariuki, S.7
Msefula, C.L.8
Gordon, M.A.9
de Pinna, E.10
-
27
-
-
33644630612
-
Comparisons of dN/dS are time dependent for closely related bacterial genomes
-
10.1016/j.jtbi.2005.08.037, 16239014
-
Rocha EP, Smith JM, Hurst LD, Holden MT, Cooper JE, Smith NH, Feil EJ. Comparisons of dN/dS are time dependent for closely related bacterial genomes. Journal of theoretical biology 2006, 239(2):226-235. 10.1016/j.jtbi.2005.08.037, 16239014.
-
(2006)
Journal of theoretical biology
, vol.239
, Issue.2
, pp. 226-235
-
-
Rocha, E.P.1
Smith, J.M.2
Hurst, L.D.3
Holden, M.T.4
Cooper, J.E.5
Smith, N.H.6
Feil, E.J.7
-
28
-
-
0022535023
-
DNA and amino acid sequence analysis of structural and immunity genes of colicins Ia and Ib
-
213442, 3531169
-
Mankovich JA, Hsu CH, Konisky J. DNA and amino acid sequence analysis of structural and immunity genes of colicins Ia and Ib. J Bacteriol 1986, 168(1):228-236. 213442, 3531169.
-
(1986)
J Bacteriol
, vol.168
, Issue.1
, pp. 228-236
-
-
Mankovich, J.A.1
Hsu, C.H.2
Konisky, J.3
-
29
-
-
0013877444
-
The relation of resistance transfer factors to the F-factor (sex-factor) of Escherichia coli K12
-
10.1017/S0016672300009538, 5324663
-
Meynell E, Datta N. The relation of resistance transfer factors to the F-factor (sex-factor) of Escherichia coli K12. Genetical research 1966, 7(1):134-140. 10.1017/S0016672300009538, 5324663.
-
(1966)
Genetical research
, vol.7
, Issue.1
, pp. 134-140
-
-
Meynell, E.1
Datta, N.2
-
30
-
-
59149104994
-
Complete genome sequence and comparative analysis of the wild-type commensal Escherichia coli strain SE11 isolated from a healthy adult
-
10.1093/dnares/dsn026, 2608844, 18931093
-
Oshima K, Toh H, Ogura Y, Sasamoto H, Morita H, Park SH, Ooka T, Iyoda S, Taylor TD, Hayashi T, et al. Complete genome sequence and comparative analysis of the wild-type commensal Escherichia coli strain SE11 isolated from a healthy adult. DNA research: an international journal for rapid publication of reports on genes and genomes 2008, 15(6):375-386. 10.1093/dnares/dsn026, 2608844, 18931093.
-
(2008)
DNA research: an international journal for rapid publication of reports on genes and genomes
, vol.15
, Issue.6
, pp. 375-386
-
-
Oshima, K.1
Toh, H.2
Ogura, Y.3
Sasamoto, H.4
Morita, H.5
Park, S.H.6
Ooka, T.7
Iyoda, S.8
Taylor, T.D.9
Hayashi, T.10
-
31
-
-
80052965901
-
The genome sequence of the incompatibility group Igamma plasmid R621a: evolution of IncI plasmids
-
10.1016/j.plasmid.2011.06.004, 21763721
-
Takahashi H, Shao M, Furuya N, Komano T. The genome sequence of the incompatibility group Igamma plasmid R621a: evolution of IncI plasmids. Plasmid 2011, 66(2):112-121. 10.1016/j.plasmid.2011.06.004, 21763721.
-
(2011)
Plasmid
, vol.66
, Issue.2
, pp. 112-121
-
-
Takahashi, H.1
Shao, M.2
Furuya, N.3
Komano, T.4
-
32
-
-
79960418330
-
Comparative genomics of 28 Salmonella enterica isolates: evidence for CRISPR-mediated adaptive sublineage evolution
-
10.1128/JB.00297-11, 3133335, 21602358
-
Fricke WF, Mammel MK, McDermott PF, Tartera C, White DG, Leclerc JE, Ravel J, Cebula TA. Comparative genomics of 28 Salmonella enterica isolates: evidence for CRISPR-mediated adaptive sublineage evolution. J Bacteriol 2011, 193(14):3556-3568. 10.1128/JB.00297-11, 3133335, 21602358.
-
(2011)
J Bacteriol
, vol.193
, Issue.14
, pp. 3556-3568
-
-
Fricke, W.F.1
Mammel, M.K.2
McDermott, P.F.3
Tartera, C.4
White, D.G.5
Leclerc, J.E.6
Ravel, J.7
Cebula, T.A.8
-
33
-
-
70149099368
-
Antimicrobial resistance-conferring plasmids with similarity to virulence plasmids from avian pathogenic Escherichia coli strains in Salmonella enterica serovar Kentucky isolates from poultry
-
10.1128/AEM.00786-09, 2747853, 19648374
-
Fricke WF, McDermott PF, Mammel MK, Zhao S, Johnson TJ, Rasko DA, Fedorka-Cray PJ, Pedroso A, Whichard JM, Leclerc JE, et al. Antimicrobial resistance-conferring plasmids with similarity to virulence plasmids from avian pathogenic Escherichia coli strains in Salmonella enterica serovar Kentucky isolates from poultry. Appl Environ Microbiol 2009, 75(18):5963-5971. 10.1128/AEM.00786-09, 2747853, 19648374.
-
(2009)
Appl Environ Microbiol
, vol.75
, Issue.18
, pp. 5963-5971
-
-
Fricke, W.F.1
McDermott, P.F.2
Mammel, M.K.3
Zhao, S.4
Johnson, T.J.5
Rasko, D.A.6
Fedorka-Cray, P.J.7
Pedroso, A.8
Whichard, J.M.9
Leclerc, J.E.10
-
34
-
-
80053411166
-
The genome sequence of E. coli W (ATCC 9637): comparative genome analysis and an improved genome-scale reconstruction of E. coli
-
10.1186/1471-2164-12-9, 3032704, 21208457
-
Archer CT, Kim JF, Jeong H, Park JH, Vickers CE, Lee SY, Nielsen LK. The genome sequence of E. coli W (ATCC 9637): comparative genome analysis and an improved genome-scale reconstruction of E. coli. BMC Genomics 2011, 12:9. 10.1186/1471-2164-12-9, 3032704, 21208457.
-
(2011)
BMC Genomics
, vol.12
, pp. 9
-
-
Archer, C.T.1
Kim, J.F.2
Jeong, H.3
Park, J.H.4
Vickers, C.E.5
Lee, S.Y.6
Nielsen, L.K.7
-
35
-
-
84863467493
-
Optical mapping and sequencing of the Escherichia coli KO11 genome reveal extensive chromosomal rearrangements, and multiple tandem copies of the Zymomonas mobilis pdc and adhB genes
-
10.1007/s10295-011-1052-2, 22075923
-
Turner PC, Yomano LP, Jarboe LR, York SW, Baggett CL, Moritz BE, Zentz EB, Shanmugam KT, Ingram LO. Optical mapping and sequencing of the Escherichia coli KO11 genome reveal extensive chromosomal rearrangements, and multiple tandem copies of the Zymomonas mobilis pdc and adhB genes. Journal of industrial microbiology & biotechnology 2012, 39(4):629-639. 10.1007/s10295-011-1052-2, 22075923.
-
(2012)
Journal of industrial microbiology & biotechnology
, vol.39
, Issue.4
, pp. 629-639
-
-
Turner, P.C.1
Yomano, L.P.2
Jarboe, L.R.3
York, S.W.4
Baggett, C.L.5
Moritz, B.E.6
Zentz, E.B.7
Shanmugam, K.T.8
Ingram, L.O.9
-
36
-
-
84855874471
-
Genome sequences and phylogenetic analysis of K88- and F18-positive porcine enterotoxigenic Escherichia coli
-
10.1128/JB.06225-11, 3256668, 22081385
-
Shepard SM, Danzeisen JL, Isaacson RE, Seemann T, Achtman M, Johnson TJ. Genome sequences and phylogenetic analysis of K88- and F18-positive porcine enterotoxigenic Escherichia coli. J Bacteriol 2012, 194(2):395-405. 10.1128/JB.06225-11, 3256668, 22081385.
-
(2012)
J Bacteriol
, vol.194
, Issue.2
, pp. 395-405
-
-
Shepard, S.M.1
Danzeisen, J.L.2
Isaacson, R.E.3
Seemann, T.4
Achtman, M.5
Johnson, T.J.6
-
37
-
-
84868319863
-
Genomic comparison of Escherichia coli O104:H4 isolates from 2009 and 2011 reveals plasmid, and prophage heterogeneity, including shiga toxin encoding phage stx2
-
10.1371/journal.pone.0048228, 3486847, 23133618
-
Ahmed SA, Awosika J, Baldwin C, Bishop-Lilly KA, Biswas B, Broomall S, Chain PS, Chertkov O, Chokoshvili O, Coyne S, et al. Genomic comparison of Escherichia coli O104:H4 isolates from 2009 and 2011 reveals plasmid, and prophage heterogeneity, including shiga toxin encoding phage stx2. PLoS One 2012, 7(11):e48228. 10.1371/journal.pone.0048228, 3486847, 23133618.
-
(2012)
PLoS One
, vol.7
, Issue.11
-
-
Ahmed, S.A.1
Awosika, J.2
Baldwin, C.3
Bishop-Lilly, K.A.4
Biswas, B.5
Broomall, S.6
Chain, P.S.7
Chertkov, O.8
Chokoshvili, O.9
Coyne, S.10
-
38
-
-
70349315444
-
Complete nucleotide sequences of plasmids pEK204, pEK499, and pEK516, encoding CTX-M enzymes in three major Escherichia coli lineages from the United Kingdom, all belonging to the international O25:H4-ST131 clone
-
10.1128/AAC.00688-09, 2764225, 19687243
-
Woodford N, Carattoli A, Karisik E, Underwood A, Ellington MJ, Livermore DM. Complete nucleotide sequences of plasmids pEK204, pEK499, and pEK516, encoding CTX-M enzymes in three major Escherichia coli lineages from the United Kingdom, all belonging to the international O25:H4-ST131 clone. Antimicrob Agents Chemother 2009, 53(10):4472-4482. 10.1128/AAC.00688-09, 2764225, 19687243.
-
(2009)
Antimicrob Agents Chemother
, vol.53
, Issue.10
, pp. 4472-4482
-
-
Woodford, N.1
Carattoli, A.2
Karisik, E.3
Underwood, A.4
Ellington, M.J.5
Livermore, D.M.6
-
39
-
-
78049387115
-
A commensal gone bad: complete genome sequence of the prototypical enterotoxigenic Escherichia coli strain H10407
-
10.1128/JB.00710-10, 2953697, 20802035
-
Crossman LC, Chaudhuri RR, Beatson SA, Wells TJ, Desvaux M, Cunningham AF, Petty NK, Mahon V, Brinkley C, Hobman JL, et al. A commensal gone bad: complete genome sequence of the prototypical enterotoxigenic Escherichia coli strain H10407. J Bacteriol 2010, 192(21):5822-5831. 10.1128/JB.00710-10, 2953697, 20802035.
-
(2010)
J Bacteriol
, vol.192
, Issue.21
, pp. 5822-5831
-
-
Crossman, L.C.1
Chaudhuri, R.R.2
Beatson, S.A.3
Wells, T.J.4
Desvaux, M.5
Cunningham, A.F.6
Petty, N.K.7
Mahon, V.8
Brinkley, C.9
Hobman, J.L.10
-
40
-
-
77955289397
-
Complete nucleotide sequence of CTX-M-15-plasmids from clinical Escherichia coli isolates: insertional events of transposons and insertion sequences
-
10.1371/journal.pone.0011202, 2887853, 20585456
-
Smet A, Van Nieuwerburgh F, Vandekerckhove TT, Martel A, Deforce D, Butaye P, Haesebrouck F. Complete nucleotide sequence of CTX-M-15-plasmids from clinical Escherichia coli isolates: insertional events of transposons and insertion sequences. PLoS One 2010, 5(6):e11202. 10.1371/journal.pone.0011202, 2887853, 20585456.
-
(2010)
PLoS One
, vol.5
, Issue.6
-
-
Smet, A.1
Van Nieuwerburgh, F.2
Vandekerckhove, T.T.3
Martel, A.4
Deforce, D.5
Butaye, P.6
Haesebrouck, F.7
-
41
-
-
84886379482
-
Tracking the establishment of local endemic populations of an emergent enteric pathogen
-
10.1073/pnas.1308632110, 3808646, 24082120
-
Holt KE, Thieu Nga TV, Thanh DP, Vinh H, Kim DW, Vu Tra MP, Campbell JI, Hoang NV, Vinh NT, Minh PV, et al. Tracking the establishment of local endemic populations of an emergent enteric pathogen. Proc Natl Acad Sci U S A 2013, 110(43):17522-17527. 10.1073/pnas.1308632110, 3808646, 24082120.
-
(2013)
Proc Natl Acad Sci U S A
, vol.110
, Issue.43
, pp. 17522-17527
-
-
Holt, K.E.1
Thieu Nga, T.V.2
Thanh, D.P.3
Vinh, H.4
Kim, D.W.5
Vu Tra, M.P.6
Campbell, J.I.7
Hoang, N.V.8
Vinh, N.T.9
Minh, P.V.10
-
42
-
-
81055156189
-
Comparative genomics and phylogeny of the IncI1 plasmids: a common plasmid type among porcine enterotoxigenic Escherichia coli
-
10.1016/j.plasmid.2011.07.003, 21843549
-
Johnson TJ, Shepard SM, Rivet B, Danzeisen JL, Carattoli A. Comparative genomics and phylogeny of the IncI1 plasmids: a common plasmid type among porcine enterotoxigenic Escherichia coli. Plasmid 2011, 66(3):144-151. 10.1016/j.plasmid.2011.07.003, 21843549.
-
(2011)
Plasmid
, vol.66
, Issue.3
, pp. 144-151
-
-
Johnson, T.J.1
Shepard, S.M.2
Rivet, B.3
Danzeisen, J.L.4
Carattoli, A.5
-
43
-
-
84870861913
-
DNA sequence analysis of plasmids from multidrug resistant Salmonella enterica serotype Heidelberg isolates
-
10.1371/journal.pone.0051160, 3519518, 23251446
-
Han J, Lynne AM, David DE, Tang H, Xu J, Nayak R, Kaldhone P, Logue CM, Foley SL. DNA sequence analysis of plasmids from multidrug resistant Salmonella enterica serotype Heidelberg isolates. PLoS One 2012, 7(12):e51160. 10.1371/journal.pone.0051160, 3519518, 23251446.
-
(2012)
PLoS One
, vol.7
, Issue.12
-
-
Han, J.1
Lynne, A.M.2
David, D.E.3
Tang, H.4
Xu, J.5
Nayak, R.6
Kaldhone, P.7
Logue, C.M.8
Foley, S.L.9
-
44
-
-
84866285343
-
Characterization of a novel microcin that kills enterohemorrhagic Escherichia coli O157:H7 and O26
-
10.1128/AEM.01067-12, 3426703, 22773653
-
Eberhart LJ, Deringer JR, Brayton KA, Sawant AA, Besser TE, Call DR. Characterization of a novel microcin that kills enterohemorrhagic Escherichia coli O157:H7 and O26. Appl Environ Microbiol 2012, 78(18):6592-6599. 10.1128/AEM.01067-12, 3426703, 22773653.
-
(2012)
Appl Environ Microbiol
, vol.78
, Issue.18
, pp. 6592-6599
-
-
Eberhart, L.J.1
Deringer, J.R.2
Brayton, K.A.3
Sawant, A.A.4
Besser, T.E.5
Call, D.R.6
-
45
-
-
84877126916
-
The plasmidome of a Salmonella enterica serovar Derby isolated from pork meat
-
10.1016/j.plasmid.2013.01.001, 23333216
-
Bleicher A, Schofl G, Rodicio Mdel R, Saluz HP. The plasmidome of a Salmonella enterica serovar Derby isolated from pork meat. Plasmid 2013, 69(3):202-210. 10.1016/j.plasmid.2013.01.001, 23333216.
-
(2013)
Plasmid
, vol.69
, Issue.3
, pp. 202-210
-
-
Bleicher, A.1
Schofl, G.2
Rodicio Mdel, R.3
Saluz, H.P.4
-
46
-
-
0036235520
-
Characterization of plasmids carrying CMY-2 from expanded-spectrum cephalosporin-resistant Salmonella strains isolated in the United States between 1996 and 1998
-
10.1128/AAC.46.5.1269-1272.2002, 127137, 11959555
-
Carattoli A, Tosini F, Giles WP, Rupp ME, Hinrichs SH, Angulo FJ, Barrett TJ, Fey PD. Characterization of plasmids carrying CMY-2 from expanded-spectrum cephalosporin-resistant Salmonella strains isolated in the United States between 1996 and 1998. Antimicrob Agents Chemother 2002, 46(5):1269-1272. 10.1128/AAC.46.5.1269-1272.2002, 127137, 11959555.
-
(2002)
Antimicrob Agents Chemother
, vol.46
, Issue.5
, pp. 1269-1272
-
-
Carattoli, A.1
Tosini, F.2
Giles, W.P.3
Rupp, M.E.4
Hinrichs, S.H.5
Angulo, F.J.6
Barrett, T.J.7
Fey, P.D.8
-
47
-
-
84862792042
-
High resolution clustering of Salmonella enterica serovar Montevideo strains using a next-generation sequencing approach
-
10.1186/1471-2164-13-32, 3368722, 22260654
-
Allard MW, Luo Y, Strain E, Li C, Keys CE, Son I, Stones R, Musser SM, Brown EW. High resolution clustering of Salmonella enterica serovar Montevideo strains using a next-generation sequencing approach. BMC Genomics 2012, 13:32. 10.1186/1471-2164-13-32, 3368722, 22260654.
-
(2012)
BMC Genomics
, vol.13
, pp. 32
-
-
Allard, M.W.1
Luo, Y.2
Strain, E.3
Li, C.4
Keys, C.E.5
Son, I.6
Stones, R.7
Musser, S.M.8
Brown, E.W.9
-
48
-
-
84857411659
-
Genomic epidemiology of the Escherichia coli O104:H4 outbreaks in Europe, 2011
-
10.1073/pnas.1121491109, 3286951, 22315421
-
Grad YH, Lipsitch M, Feldgarden M, Arachchi HM, Cerqueira GC, Fitzgerald M, Godfrey P, Haas BJ, Murphy CI, Russ C, et al. Genomic epidemiology of the Escherichia coli O104:H4 outbreaks in Europe, 2011. Proc Natl Acad Sci U S A 2012, 109(8):3065-3070. 10.1073/pnas.1121491109, 3286951, 22315421.
-
(2012)
Proc Natl Acad Sci U S A
, vol.109
, Issue.8
, pp. 3065-3070
-
-
Grad, Y.H.1
Lipsitch, M.2
Feldgarden, M.3
Arachchi, H.M.4
Cerqueira, G.C.5
Fitzgerald, M.6
Godfrey, P.7
Haas, B.J.8
Murphy, C.I.9
Russ, C.10
-
49
-
-
48349124258
-
High-throughput sequencing provides insights into genome variation and evolution in Salmonella Typhi
-
10.1038/ng.195, 2652037, 18660809
-
Holt KE, Parkhill J, Mazzoni CJ, Roumagnac P, Weill FX, Goodhead I, Rance R, Baker S, Maskell DJ, Wain J, et al. High-throughput sequencing provides insights into genome variation and evolution in Salmonella Typhi. Nat Genet 2008, 40(8):987-993. 10.1038/ng.195, 2652037, 18660809.
-
(2008)
Nat Genet
, vol.40
, Issue.8
, pp. 987-993
-
-
Holt, K.E.1
Parkhill, J.2
Mazzoni, C.J.3
Roumagnac, P.4
Weill, F.X.5
Goodhead, I.6
Rance, R.7
Baker, S.8
Maskell, D.J.9
Wain, J.10
-
50
-
-
84876847817
-
Neutral genomic microevolution of a recently emerged pathogen, Salmonella enterica serovar Agona
-
10.1371/journal.pgen.1003471, 3630104, 23637636
-
Zhou Z, McCann A, Litrup E, Murphy R, Cormican M, Fanning S, Brown D, Guttman DS, Brisse S, Achtman M. Neutral genomic microevolution of a recently emerged pathogen, Salmonella enterica serovar Agona. PLoS Genet 2013, 9(4):e1003471. 10.1371/journal.pgen.1003471, 3630104, 23637636.
-
(2013)
PLoS Genet
, vol.9
, Issue.4
-
-
Zhou, Z.1
McCann, A.2
Litrup, E.3
Murphy, R.4
Cormican, M.5
Fanning, S.6
Brown, D.7
Guttman, D.S.8
Brisse, S.9
Achtman, M.10
-
51
-
-
0027208795
-
Mechanisms of genome propagation and helper exploitation by satellite phage P4
-
372931, 8246844
-
Lindqvist BH, Deho G, Calendar R. Mechanisms of genome propagation and helper exploitation by satellite phage P4. Microbiological reviews 1993, 57(3):683-702. 372931, 8246844.
-
(1993)
Microbiological reviews
, vol.57
, Issue.3
, pp. 683-702
-
-
Lindqvist, B.H.1
Deho, G.2
Calendar, R.3
-
52
-
-
84876848287
-
Comprehensive assignment of roles for Salmonella typhimurium genes in intestinal colonization of food-producing animals
-
10.1371/journal.pgen.1003456, 3630085, 23637626
-
Chaudhuri RR, Morgan E, Peters SE, Pleasance SJ, Hudson DL, Davies HM, Wang J, van Diemen PM, Buckley AM, Bowen AJ, et al. Comprehensive assignment of roles for Salmonella typhimurium genes in intestinal colonization of food-producing animals. PLoS Genet 2013, 9(4):e1003456. 10.1371/journal.pgen.1003456, 3630085, 23637626.
-
(2013)
PLoS Genet
, vol.9
, Issue.4
-
-
Chaudhuri, R.R.1
Morgan, E.2
Peters, S.E.3
Pleasance, S.J.4
Hudson, D.L.5
Davies, H.M.6
Wang, J.7
van Diemen, P.M.8
Buckley, A.M.9
Bowen, A.J.10
-
53
-
-
0031036610
-
A novel plasmid-encoded phage abortive infection system from Lactococcus lactis biovar. diacetylactis
-
10.1111/j.1574-6968.1997.tb10185.x, 8997719
-
Deng YM, Harvey ML, Liu CQ, Dunn NW. A novel plasmid-encoded phage abortive infection system from Lactococcus lactis biovar. diacetylactis. FEMS Microbiol Lett 1997, 146(1):149-154. 10.1111/j.1574-6968.1997.tb10185.x, 8997719.
-
(1997)
FEMS Microbiol Lett
, vol.146
, Issue.1
, pp. 149-154
-
-
Deng, Y.M.1
Harvey, M.L.2
Liu, C.Q.3
Dunn, N.W.4
-
54
-
-
79955834999
-
Dutch patients, retail chicken meat and poultry share the same ESBL genes, plasmids and strains
-
10.1111/j.1469-0691.2011.03497.x, 21463397
-
Leverstein-van Hall MA, Dierikx CM, Cohen Stuart J, Voets GM, van den Munckhof MP, van Essen-Zandbergen A, Platteel T, Fluit AC, van de Sande-Bruinsma N, Scharinga J, et al. Dutch patients, retail chicken meat and poultry share the same ESBL genes, plasmids and strains. Clin Microbiol Infect 2011, 17(6):873-880. 10.1111/j.1469-0691.2011.03497.x, 21463397.
-
(2011)
Clin Microbiol Infect
, vol.17
, Issue.6
, pp. 873-880
-
-
Leverstein-van Hall, M.A.1
Dierikx, C.M.2
Cohen Stuart, J.3
Voets, G.M.4
van den Munckhof, M.P.5
van Essen-Zandbergen, A.6
Platteel, T.7
Fluit, A.C.8
van de Sande-Bruinsma, N.9
Scharinga, J.10
-
55
-
-
44449143907
-
Multilocus sequence typing of IncI1 plasmids carrying extended-spectrum beta-lactamases in Escherichia coli and Salmonella of human and animal origin
-
10.1093/jac/dkn131, 18367460
-
Garcia-Fernandez A, Chiaretto G, Bertini A, Villa L, Fortini D, Ricci A, Carattoli A. Multilocus sequence typing of IncI1 plasmids carrying extended-spectrum beta-lactamases in Escherichia coli and Salmonella of human and animal origin. The Journal of antimicrobial chemotherapy 2008, 61(6):1229-1233. 10.1093/jac/dkn131, 18367460.
-
(2008)
The Journal of antimicrobial chemotherapy
, vol.61
, Issue.6
, pp. 1229-1233
-
-
Garcia-Fernandez, A.1
Chiaretto, G.2
Bertini, A.3
Villa, L.4
Fortini, D.5
Ricci, A.6
Carattoli, A.7
-
56
-
-
84860771820
-
SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing
-
10.1089/cmb.2012.0021, 3342519, 22506599
-
Bankevich A, Nurk S, Antipov D, Gurevich AA, Dvorkin M, Kulikov AS, Lesin VM, Nikolenko SI, Pham S, Prjibelski AD, et al. SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing. Journal of computational biology: a journal of computational molecular cell biology 2012, 19(5):455-477. 10.1089/cmb.2012.0021, 3342519, 22506599.
-
(2012)
Journal of computational biology: a journal of computational molecular cell biology
, vol.19
, Issue.5
, pp. 455-477
-
-
Bankevich, A.1
Nurk, S.2
Antipov, D.3
Gurevich, A.A.4
Dvorkin, M.5
Kulikov, A.S.6
Lesin, V.M.7
Nikolenko, S.I.8
Pham, S.9
Prjibelski, A.D.10
-
57
-
-
77949587649
-
Fast and accurate long-read alignment with Burrows-Wheeler transform
-
10.1093/bioinformatics/btp698, 2828108, 20080505
-
Li H, Durbin R. Fast and accurate long-read alignment with Burrows-Wheeler transform. Bioinformatics 2010, 26(5):589-595. 10.1093/bioinformatics/btp698, 2828108, 20080505.
-
(2010)
Bioinformatics
, vol.26
, Issue.5
, pp. 589-595
-
-
Li, H.1
Durbin, R.2
-
58
-
-
2942538300
-
Versatile and open software for comparing large genomes
-
10.1186/gb-2004-5-2-r12, 395750, 14759262
-
Kurtz S, Phillippy A, Delcher AL, Smoot M, Shumway M, Antonescu C, Salzberg SL. Versatile and open software for comparing large genomes. Genome Biol 2004, 5(2):R12. 10.1186/gb-2004-5-2-r12, 395750, 14759262.
-
(2004)
Genome Biol
, vol.5
, Issue.2
-
-
Kurtz, S.1
Phillippy, A.2
Delcher, A.L.3
Smoot, M.4
Shumway, M.5
Antonescu, C.6
Salzberg, S.L.7
-
59
-
-
79959979274
-
PHAST: a fast phage search tool
-
Web Server issue, 10.1093/nar/gkr485, 3125810, 21672955
-
Zhou Y, Liang Y, Lynch KH, Dennis JJ, Wishart DS. PHAST: a fast phage search tool. Nucleic Acids Res 2011, 39:W347-W352. Web Server issue, 10.1093/nar/gkr485, 3125810, 21672955.
-
(2011)
Nucleic Acids Res
, vol.39
-
-
Zhou, Y.1
Liang, Y.2
Lynch, K.H.3
Dennis, J.J.4
Wishart, D.S.5
-
60
-
-
24044433279
-
ACT: the Artemis Comparison Tool
-
10.1093/bioinformatics/bti553, 15976072
-
Carver TJ, Rutherford KM, Berriman M, Rajandream MA, Barrell BG, Parkhill J. ACT: the Artemis Comparison Tool. Bioinformatics 2005, 21(16):3422-3423. 10.1093/bioinformatics/bti553, 15976072.
-
(2005)
Bioinformatics
, vol.21
, Issue.16
, pp. 3422-3423
-
-
Carver, T.J.1
Rutherford, K.M.2
Berriman, M.3
Rajandream, M.A.4
Barrell, B.G.5
Parkhill, J.6
-
61
-
-
68549104404
-
The Sequence Alignment/Map format and SAMtools
-
10.1093/bioinformatics/btp352, 2723002, 19505943
-
Li H, Handsaker B, Wysoker A, Fennell T, Ruan J, Homer N, Marth G, Abecasis G, Durbin R. The Sequence Alignment/Map format and SAMtools. Bioinformatics 2009, 25(16):2078-2079. 10.1093/bioinformatics/btp352, 2723002, 19505943.
-
(2009)
Bioinformatics
, vol.25
, Issue.16
, pp. 2078-2079
-
-
Li, H.1
Handsaker, B.2
Wysoker, A.3
Fennell, T.4
Ruan, J.5
Homer, N.6
Marth, G.7
Abecasis, G.8
Durbin, R.9
-
62
-
-
84865683817
-
Shigella sonnei genome sequencing and phylogenetic analysis indicate recent global dissemination from Europe
-
10.1038/ng.2369, 3442231, 22863732
-
Holt K, Baker S, Weill F, Holmes E, Kitchen A, Yu J, Sangal V, Brown D, Coia J, Kim D, et al. Shigella sonnei genome sequencing and phylogenetic analysis indicate recent global dissemination from Europe. Nat Genet 2012, 44(9):1056-1059. 10.1038/ng.2369, 3442231, 22863732.
-
(2012)
Nat Genet
, vol.44
, Issue.9
, pp. 1056-1059
-
-
Holt, K.1
Baker, S.2
Weill, F.3
Holmes, E.4
Kitchen, A.5
Yu, J.6
Sangal, V.7
Brown, D.8
Coia, J.9
Kim, D.10
-
63
-
-
33750403801
-
RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models
-
10.1093/bioinformatics/btl446, 16928733
-
Stamatakis A. RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models. Bioinformatics 2006, 22(21):2688-2690. 10.1093/bioinformatics/btl446, 16928733.
-
(2006)
Bioinformatics
, vol.22
, Issue.21
, pp. 2688-2690
-
-
Stamatakis, A.1
-
64
-
-
39749191170
-
Drawing explicit phylogenetic networks and their integration into SplitsTree
-
10.1186/1471-2148-8-22, 2253509, 18218099
-
Kloepper TH, Huson DH. Drawing explicit phylogenetic networks and their integration into SplitsTree. BMC Evol Biol 2008, 8:22. 10.1186/1471-2148-8-22, 2253509, 18218099.
-
(2008)
BMC Evol Biol
, vol.8
, pp. 22
-
-
Kloepper, T.H.1
Huson, D.H.2
-
65
-
-
34547803197
-
PAML 4: phylogenetic analysis by maximum likelihood
-
10.1093/molbev/msm088, 17483113
-
Yang Z. PAML 4: phylogenetic analysis by maximum likelihood. Mol Biol Evol 2007, 24(8):1586-1591. 10.1093/molbev/msm088, 17483113.
-
(2007)
Mol Biol Evol
, vol.24
, Issue.8
, pp. 1586-1591
-
-
Yang, Z.1
-
66
-
-
0034201441
-
EMBOSS: the European Molecular Biology Open Software Suite
-
10.1016/S0168-9525(00)02024-2, 10827456
-
Rice P, Longden I, Bleasby A. EMBOSS: the European Molecular Biology Open Software Suite. Trends Genet 2000, 16(6):276-277. 10.1016/S0168-9525(00)02024-2, 10827456.
-
(2000)
Trends Genet
, vol.16
, Issue.6
, pp. 276-277
-
-
Rice, P.1
Longden, I.2
Bleasby, A.3
-
67
-
-
79961109150
-
BLAST Ring Image Generator (BRIG): simple prokaryote genome comparisons
-
10.1186/1471-2164-12-402, 3163573, 21824423
-
Alikhan NF, Petty NK, Ben Zakour NL, Beatson SA. BLAST Ring Image Generator (BRIG): simple prokaryote genome comparisons. BMC Genomics 2011, 12:402. 10.1186/1471-2164-12-402, 3163573, 21824423.
-
(2011)
BMC Genomics
, vol.12
, pp. 402
-
-
Alikhan, N.F.1
Petty, N.K.2
Ben Zakour, N.L.3
Beatson, S.A.4
-
68
-
-
84866902363
-
Short read sequence typing (SRST): multi-locus sequence types from short reads
-
10.1186/1471-2164-13-338, 3460743, 22827703
-
Inouye M, Conway TC, Zobel J, Holt KE. Short read sequence typing (SRST): multi-locus sequence types from short reads. BMC Genomics 2012, 13:338. 10.1186/1471-2164-13-338, 3460743, 22827703.
-
(2012)
BMC Genomics
, vol.13
, pp. 338
-
-
Inouye, M.1
Conway, T.C.2
Zobel, J.3
Holt, K.E.4
-
69
-
-
5344254628
-
Multiple-locus variable-number tandem-repeats analysis of Salmonella enterica subsp. enterica serovar Typhimurium using PCR multiplexing and multicolor capillary electrophoresis
-
10.1016/j.mimet.2004.06.014, 15369852
-
Lindstedt BA, Vardund T, Aas L, Kapperud G. Multiple-locus variable-number tandem-repeats analysis of Salmonella enterica subsp. enterica serovar Typhimurium using PCR multiplexing and multicolor capillary electrophoresis. J Microbiol Methods 2004, 59(2):163-172. 10.1016/j.mimet.2004.06.014, 15369852.
-
(2004)
J Microbiol Methods
, vol.59
, Issue.2
, pp. 163-172
-
-
Lindstedt, B.A.1
Vardund, T.2
Aas, L.3
Kapperud, G.4
-
70
-
-
76749124615
-
Development of a new nomenclature for Salmonella typhimurium multilocus variable number of tandem repeats analysis (MLVA)
-
Larsson JT, Torpdahl M, Petersen RF, Sorensen G, Lindstedt BA, Nielsen EM. Development of a new nomenclature for Salmonella typhimurium multilocus variable number of tandem repeats analysis (MLVA). Euro surveillance: bulletin europeen sur les maladies transmissibles = European communicable disease bulletin 2009, 14:15.
-
(2009)
Euro surveillance: bulletin europeen sur les maladies transmissibles = European communicable disease bulletin
, vol.14
, pp. 15
-
-
Larsson, J.T.1
Torpdahl, M.2
Petersen, R.F.3
Sorensen, G.4
Lindstedt, B.A.5
Nielsen, E.M.6
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