-
1
-
-
0036703330
-
RNA editing by adenosine deaminases generates RNA and protein diversity
-
Schaub, M. and Keller, W. (2002) RNA editing by adenosine deaminases generates RNA and protein diversity Biochimie 84, 791-803
-
(2002)
Biochimie
, vol.84
, pp. 791-803
-
-
Schaub, M.1
Keller, W.2
-
2
-
-
33344474405
-
Fine-tuning of RNA functions by modification and editing
-
(Grosjean, H. Ed.) pp, Springer, New York
-
Grosjean, H. (2005) Fine-tuning of RNA functions by modification and editing, in Topics in Current Genetics (Grosjean, H., Ed.) pp 1-22, Springer, New York.
-
(2005)
Topics in Current Genetics
, pp. 1-22
-
-
Grosjean, H.1
-
3
-
-
0027772363
-
RNA editing of AMPA receptor subunit GluR-B: A base-paired intron-exon structure determines position and efficiency
-
Higuchi, M., Single, F. N., Kohler, M., Sommer, B., Sprengel, R., and Seeburg, P. H. (1993) RNA editing of AMPA receptor subunit GluR-B: a base-paired intron-exon structure determines position and efficiency Cell 75, 1361-1370
-
(1993)
Cell
, vol.75
, pp. 1361-1370
-
-
Higuchi, M.1
Single, F.N.2
Kohler, M.3
Sommer, B.4
Sprengel, R.5
Seeburg, P.H.6
-
4
-
-
0030916712
-
Regulation of serotonin-2C receptor G-protein coupling by RNA editing
-
Burns, C. M., Chu, H., Rueter, S. M., Hutchinson, L. K., Canton, H., Sanders-Bush, E., and Emeson, R. B. (1997) Regulation of serotonin-2C receptor G-protein coupling by RNA editing Nature 387, 303-308
-
(1997)
Nature
, vol.387
, pp. 303-308
-
-
Burns, C.M.1
Chu, H.2
Rueter, S.M.3
Hutchinson, L.K.4
Canton, H.5
Sanders-Bush, E.6
Emeson, R.B.7
-
5
-
-
0035085519
-
RNA editing of the human serotonin 5-HT2C receptor. Alterations in suicide and implications for serotonergic pharmacotherapy
-
Niswender, C. M., Herrick-Davis, K., Dilley, G. E., Meltzer, H. Y., Overholser, J. C., Stockmeier, C. A., Emeson, R. B., and Sanders-Bush, E. (2001) RNA editing of the human serotonin 5-HT2C receptor. alterations in suicide and implications for serotonergic pharmacotherapy Neuropsychopharmacology 24, 478-491
-
(2001)
Neuropsychopharmacology
, vol.24
, pp. 478-491
-
-
Niswender, C.M.1
Herrick-Davis, K.2
Dilley, G.E.3
Meltzer, H.Y.4
Overholser, J.C.5
Stockmeier, C.A.6
Emeson, R.B.7
Sanders-Bush, E.8
-
6
-
-
0037171846
-
Altered editing of serotonin 2C receptor pre-mRNA in the prefrontal cortex of depressed suicide victims
-
Gurevich, I., Tamir, H., Arango, V., Dwork, A. J., Mann, J. J., and Schmauss, C. (2002) Altered editing of serotonin 2C receptor pre-mRNA in the prefrontal cortex of depressed suicide victims Neuron 34, 349-356
-
(2002)
Neuron
, vol.34
, pp. 349-356
-
-
Gurevich, I.1
Tamir, H.2
Arango, V.3
Dwork, A.J.4
Mann, J.J.5
Schmauss, C.6
-
7
-
-
0038645126
-
RNA editing of serotonin 2C receptor in human postmortem brains of major mental disorders
-
Iwamoto, K. and Kato, T. (2003) RNA editing of serotonin 2C receptor in human postmortem brains of major mental disorders Neurosci. Lett. 346, 169-172
-
(2003)
Neurosci. Lett.
, vol.346
, pp. 169-172
-
-
Iwamoto, K.1
Kato, T.2
-
8
-
-
1542378930
-
Glutamate receptors: RNA editing and death of motor neurons
-
Kawahara, Y., Ito, K., Sun, H., Aizawa, H., Kanazawa, I., and Kwak, S. (2004) Glutamate receptors: RNA editing and death of motor neurons Nature 427, 801
-
(2004)
Nature
, vol.427
, pp. 801
-
-
Kawahara, Y.1
Ito, K.2
Sun, H.3
Aizawa, H.4
Kanazawa, I.5
Kwak, S.6
-
9
-
-
30844442607
-
The snoRNA HBII-52 regulates alternative splicing of the serotonin receptor 2C
-
Kishore, S. and Stamm, S. (2006) The snoRNA HBII-52 regulates alternative splicing of the serotonin receptor 2C Science 311, 230-232
-
(2006)
Science
, vol.311
, pp. 230-232
-
-
Kishore, S.1
Stamm, S.2
-
10
-
-
66149158193
-
Loss of the imprinted snoRNA mbii-52 leads to increased 5htr2c pre-RNA editing and altered 5HT2CR-mediated behaviour
-
Doe, C. M., Relkovic, D., Garfield, A. S., Dalley, J. W., Theobald, D. E., Humby, T., Wilkinson, L. S., and Isles, A. R. (2009) Loss of the imprinted snoRNA mbii-52 leads to increased 5htr2c pre-RNA editing and altered 5HT2CR-mediated behaviour Hum. Mol. Genet. 18, 2140-2148
-
(2009)
Hum. Mol. Genet.
, vol.18
, pp. 2140-2148
-
-
Doe, C.M.1
Relkovic, D.2
Garfield, A.S.3
Dalley, J.W.4
Theobald, D.E.5
Humby, T.6
Wilkinson, L.S.7
Isles, A.R.8
-
11
-
-
66349122954
-
Genome-wide identification of human RNA editing sites by parallel DNA capturing and sequencing
-
Li, J. B., Levanon, E. Y., Yoon, J. K., Aach, J., Xie, B., LeProust, E., Zhang, K., Gao, Y., and Church, G. M. (2009) Genome-wide identification of human RNA editing sites by parallel DNA capturing and sequencing Science 324, 1210-1213
-
(2009)
Science
, vol.324
, pp. 1210-1213
-
-
Li, J.B.1
Levanon, E.Y.2
Yoon, J.K.3
Aach, J.4
Xie, B.5
Leproust, E.6
Zhang, K.7
Gao, Y.8
Church, G.M.9
-
12
-
-
78650542645
-
RNA editing changes the lesion specificity for the DNA repair enzyme NEIL1
-
Yeo, J., Goodman, R. A., Schirle, N. T., David, S. S., and Beal, P. A. (2010) RNA editing changes the lesion specificity for the DNA repair enzyme NEIL1 Proc. Natl. Acad. Sci. U. S. A. 107, 20715-20719
-
(2010)
Proc. Natl. Acad. Sci. U. S. A.
, vol.107
, pp. 20715-20719
-
-
Yeo, J.1
Goodman, R.A.2
Schirle, N.T.3
David, S.S.4
Beal, P.A.5
-
13
-
-
84868207785
-
Mutations in ADAR1 cause Aicardi-Goutieres syndrome associated with a type i interferon signature
-
Rice, G. I., Kasher, P. R., Forte, G. M., Mannion, N. M., Greenwood, S. M., Szynkiewicz, M., Dickerson, J. E., Bhaskar, S. S., Zampini, M., Briggs, T. A., Jenkinson, E. M., Bacino, C. A., Battini, R., Bertini, E., Brogan, P. A., Brueton, L. A., Carpanelli, M., De Laet, C., de Lonlay, P., del Toro, M., Desguerre, I., Fazzi, E., Garcia-Cazorla, A., Heiberg, A., Kawaguchi, M., Kumar, R., Lin, J. P., Lourenco, C. M., Male, A. M., Marques, W., Jr., Mignot, C., Olivieri, I., Orcesi, S., Prabhakar, P., Rasmussen, M., Robinson, R. A., Rozenberg, F., Schmidt, J. L., Steindl, K., Tan, T. Y., van der Merwe, W. G., Vanderver, A., Vassallo, G., Wakeling, E. L., Wassmer, E., Whittaker, E., Livingston, J. H., Lebon, P., Suzuki, T., McLaughlin, P. J., Keegan, L. P., O'Connell, M. A., Lovell, S. C., and Crow, Y. J. (2012) Mutations in ADAR1 cause Aicardi-Goutieres syndrome associated with a type I interferon signature Nat. Genet. 44, 1243-1248
-
(2012)
Nat. Genet.
, vol.44
, pp. 1243-1248
-
-
Rice, G.I.1
Kasher, P.R.2
Forte, G.M.3
Mannion, N.M.4
Greenwood, S.M.5
Szynkiewicz, M.6
Dickerson, J.E.7
Bhaskar, S.S.8
Zampini, M.9
Briggs, T.A.10
Jenkinson, E.M.11
Bacino, C.A.12
Battini, R.13
Bertini, E.14
Brogan, P.A.15
Brueton, L.A.16
Carpanelli, M.17
De Laet, C.18
De Lonlay, P.19
Del Toro, M.20
Desguerre, I.21
Fazzi, E.22
Garcia-Cazorla, A.23
Heiberg, A.24
Kawaguchi, M.25
Kumar, R.26
Lin, J.P.27
Lourenco, C.M.28
Male, A.M.29
Marques Jr., W.30
Mignot, C.31
Olivieri, I.32
Orcesi, S.33
Prabhakar, P.34
Rasmussen, M.35
Robinson, R.A.36
Rozenberg, F.37
Schmidt, J.L.38
Steindl, K.39
Tan, T.Y.40
Van Der Merwe, W.G.41
Vanderver, A.42
Vassallo, G.43
Wakeling, E.L.44
Wassmer, E.45
Whittaker, E.46
Livingston, J.H.47
Lebon, P.48
Suzuki, T.49
McLaughlin, P.J.50
Keegan, L.P.51
O'Connell, M.A.52
Lovell, S.C.53
Crow, Y.J.54
more..
-
14
-
-
26444527501
-
Identification of a novel ADAR mutation in a Chinese family with dyschromatosis symmetrica hereditaria (DSH)
-
Xing, Q., Wang, M., Chen, X., Qian, X., Qin, W., Gao, J., Wu, S., Gao, R., Feng, G., and He, L. (2005) Identification of a novel ADAR mutation in a Chinese family with dyschromatosis symmetrica hereditaria (DSH) Arch. Dermatol. Res. 297, 139-142
-
(2005)
Arch. Dermatol. Res.
, vol.297
, pp. 139-142
-
-
Xing, Q.1
Wang, M.2
Chen, X.3
Qian, X.4
Qin, W.5
Gao, J.6
Wu, S.7
Gao, R.8
Feng, G.9
He, L.10
-
15
-
-
0029164692
-
Expression and regulation by interferon of a double-stranded-RNA-specific adenosine deaminase from human cells: Evidence for two forms of the deaminase
-
Patterson, J. P. and Samuel, C. E. (1995) Expression and regulation by interferon of a double-stranded-RNA-specific adenosine deaminase from human cells: evidence for two forms of the deaminase Mol. Cell. Biol. 15, 5376-5388
-
(1995)
Mol. Cell. Biol.
, vol.15
, pp. 5376-5388
-
-
Patterson, J.P.1
Samuel, C.E.2
-
16
-
-
0030051809
-
A mammalian RNA editing enzyme
-
Melcher, T., Maas, S., Herb, A., Sprengel, R., Seeburg, P. H., and Higuchi, M. (1996) A mammalian RNA editing enzyme Nature 379, 460-464
-
(1996)
Nature
, vol.379
, pp. 460-464
-
-
Melcher, T.1
Maas, S.2
Herb, A.3
Sprengel, R.4
Seeburg, P.H.5
Higuchi, M.6
-
17
-
-
0029775644
-
RED2, a brain-specific member of the RNA-specific adenosine deaminase family
-
Melcher, T., Maas, S., Herb, A., Sprengel, R., Higuchi, M., and Seeburg, P. H. (1996) RED2, a brain-specific member of the RNA-specific adenosine deaminase family J. Biol. Chem. 271, 31795-31798
-
(1996)
J. Biol. Chem.
, vol.271
, pp. 31795-31798
-
-
Melcher, T.1
Maas, S.2
Herb, A.3
Sprengel, R.4
Higuchi, M.5
Seeburg, P.H.6
-
18
-
-
33750704956
-
Adenosine-to-inosine RNA editing: Perspectives and predictions
-
Hoopengardner, B. (2006) Adenosine-to-inosine RNA editing: perspectives and predictions Mini-Rev. Med. Chem. 6, 1213-1216
-
(2006)
Mini-Rev. Med. Chem.
, vol.6
, pp. 1213-1216
-
-
Hoopengardner, B.1
-
19
-
-
80054895180
-
Pin1 and WWP2 regulate GluR2 Q/R site RNA editing by ADAR2 with opposing effects
-
Marcucci, R., Brindle, J., Paro, S., Casadio, A., Hempel, S., Morrice, N., Bisso, A., Keegan, L. P., Del Sal, G., and O'Connell, M. A. (2011) Pin1 and WWP2 regulate GluR2 Q/R site RNA editing by ADAR2 with opposing effects EMBO J. 30, 4211-4222
-
(2011)
EMBO J.
, vol.30
, pp. 4211-4222
-
-
Marcucci, R.1
Brindle, J.2
Paro, S.3
Casadio, A.4
Hempel, S.5
Morrice, N.6
Bisso, A.7
Keegan, L.P.8
Del Sal, G.9
O'Connell, M.A.10
-
20
-
-
81855226703
-
ADAR Proteins: Structure and Catalytic Mechanism
-
Goodman, R. A., Macbeth, M. R., and Beal, P. A. (2012) ADAR Proteins: Structure and Catalytic Mechanism Curr. Top. Microbiol. Immunol. 353, 1-33
-
(2012)
Curr. Top. Microbiol. Immunol.
, vol.353
, pp. 1-33
-
-
Goodman, R.A.1
MacBeth, M.R.2
Beal, P.A.3
-
21
-
-
0036966283
-
New and old roles of the double-stranded RNA-binding domain
-
Doyle, M. and Jantsch, M. F. (2002) New and old roles of the double-stranded RNA-binding domain J. Struct. Biol. 140, 147-153
-
(2002)
J. Struct. Biol.
, vol.140
, pp. 147-153
-
-
Doyle, M.1
Jantsch, M.F.2
-
22
-
-
0032535613
-
Molecular basis of double-stranded RNA-protein interactions: Structure of a dsRNA-binding domain complexed with dsRNA
-
Ryter, J. M. and Schultz, S. C. (1998) Molecular basis of double-stranded RNA-protein interactions: structure of a dsRNA-binding domain complexed with dsRNA EMBO J. 17, 7505-7513
-
(1998)
EMBO J.
, vol.17
, pp. 7505-7513
-
-
Ryter, J.M.1
Schultz, S.C.2
-
23
-
-
0028407347
-
Binding properties of newly identified Xenopus proteins containing dsRNA-binding motifs
-
Bass, B. L., Hurst, S. R., and Singer, J. D. (1994) Binding properties of newly identified Xenopus proteins containing dsRNA-binding motifs Curr. Biol. 4, 301-314
-
(1994)
Curr. Biol.
, vol.4
, pp. 301-314
-
-
Bass, B.L.1
Hurst, S.R.2
Singer, J.D.3
-
24
-
-
79956271523
-
Predicting sites of ADAR editing in double-stranded RNA
-
Eggington, J. M., Greene, T., and Bass, B. L. (2011) Predicting sites of ADAR editing in double-stranded RNA Nat. Commun. 2, 319
-
(2011)
Nat. Commun.
, vol.2
, pp. 319
-
-
Eggington, J.M.1
Greene, T.2
Bass, B.L.3
-
25
-
-
24644519954
-
Inositol hexakisphosphate is bound in the ADAR2 core and required for RNA editing
-
Macbeth, M. R., Schubert, H. L., VanDemark, A. P., Lingam, A. T., Hill, C. P., and Bass, B. L. (2005) Inositol hexakisphosphate is bound in the ADAR2 core and required for RNA editing Science 309, 1534-1539
-
(2005)
Science
, vol.309
, pp. 1534-1539
-
-
MacBeth, M.R.1
Schubert, H.L.2
Vandemark, A.P.3
Lingam, A.T.4
Hill, C.P.5
Bass, B.L.6
-
26
-
-
33947510692
-
High-throughput screening for functional adenosine to inosine RNA editing systems
-
Pokharel, S. and Beal, P. A. (2006) High-throughput screening for functional adenosine to inosine RNA editing systems ACS Chem. Biol. 1, 761-765
-
(2006)
ACS Chem. Biol.
, vol.1
, pp. 761-765
-
-
Pokharel, S.1
Beal, P.A.2
-
27
-
-
84887589722
-
A Screening Protocol for Identification of Functional Mutants of RNA Editing Adenosine Deaminases
-
Eifler, T., Chan, D., and Beal, P. A. (2012) A Screening Protocol for Identification of Functional Mutants of RNA Editing Adenosine Deaminases Curr. Protoc. Chem. Biol. 4, 357-369
-
(2012)
Curr. Protoc. Chem. Biol.
, vol.4
, pp. 357-369
-
-
Eifler, T.1
Chan, D.2
Beal, P.A.3
-
28
-
-
84870344968
-
Mechanistic insights into editing-site specificity of ADARs
-
Kuttan, A. and Bass, B. L. (2012) Mechanistic insights into editing-site specificity of ADARs Proc. Natl. Acad. Sci. U. S. A. 109, E3295-E3304
-
(2012)
Proc. Natl. Acad. Sci. U. S. A.
, vol.109
-
-
Kuttan, A.1
Bass, B.L.2
-
29
-
-
84874618556
-
A high-throughput screen to identify enhancers of ADAR-mediated RNA-editing
-
Garncarz, W., Tariq, A., Handl, C., Pusch, O., and Jantsch, M. F. (2013) A high-throughput screen to identify enhancers of ADAR-mediated RNA-editing RNA Biol. 10, 192-204
-
(2013)
RNA Biol.
, vol.10
, pp. 192-204
-
-
Garncarz, W.1
Tariq, A.2
Handl, C.3
Pusch, O.4
Jantsch, M.F.5
-
30
-
-
84874622310
-
RNA editing of the GLI1 transcription factor modulates the output of Hedgehog signaling
-
Shimokawa, T., Rahman, M. F., Tostar, U., Sonkoly, E., Stahle, M., Pivarcsi, A., Palaniswamy, R., and Zaphiropoulos, P. G. (2013) RNA editing of the GLI1 transcription factor modulates the output of Hedgehog signaling RNA Biol. 10, 321-333
-
(2013)
RNA Biol.
, vol.10
, pp. 321-333
-
-
Shimokawa, T.1
Rahman, M.F.2
Tostar, U.3
Sonkoly, E.4
Stahle, M.5
Pivarcsi, A.6
Palaniswamy, R.7
Zaphiropoulos, P.G.8
-
31
-
-
0034633941
-
Analysis of the RNA-editing reaction of ADAR2 with structural and fluorescent analogues of the GluR-B R/G editing site
-
Stephens, O. M., Yi-Brunozzi, H. Y., and Beal, P. A. (2000) Analysis of the RNA-editing reaction of ADAR2 with structural and fluorescent analogues of the GluR-B R/G editing site Biochemistry 39, 12243-12251
-
(2000)
Biochemistry
, vol.39
, pp. 12243-12251
-
-
Stephens, O.M.1
Yi-Brunozzi, H.Y.2
Beal, P.A.3
-
32
-
-
0028046412
-
Protein-protein interactions in the yeast pheromone response pathway - Ste5p interacts with all members of the Map kinase cascade
-
Printen, J. A. and Sprague, G. F. (1994) Protein-protein interactions in the yeast pheromone response pathway-Ste5p interacts with all members of the Map kinase cascade Genetics 138, 609-619
-
(1994)
Genetics
, vol.138
, pp. 609-619
-
-
Printen, J.A.1
Sprague, G.F.2
-
33
-
-
34548594092
-
Large-scale overexpression and purification of ADARs from Saccharomyces cerevisiae for biophysical and biochemical studies
-
Macbeth, M. R. and Bass, B. L. (2007) Large-scale overexpression and purification of ADARs from Saccharomyces cerevisiae for biophysical and biochemical studies Methods Enzymol. 424, 319-331
-
(2007)
Methods Enzymol.
, vol.424
, pp. 319-331
-
-
MacBeth, M.R.1
Bass, B.L.2
-
34
-
-
2142738304
-
WebLogo: A sequence logo generator
-
Crooks, G. E., Hon, G., Chandonia, J. M., and Brenner, S. E. (2004) WebLogo: A sequence logo generator Genome. Res. 14, 1188-1190
-
(2004)
Genome. Res.
, vol.14
, pp. 1188-1190
-
-
Crooks, G.E.1
Hon, G.2
Chandonia, J.M.3
Brenner, S.E.4
-
35
-
-
77957919940
-
Selective inhibition of ADAR2-catalyzed editing of the serotonin 2c receptor pre-mRNA by a helix-threading peptide
-
Schirle, N. T., Goodman, R. A., Krishnamurthy, M., and Beal, P. A. (2010) Selective inhibition of ADAR2-catalyzed editing of the serotonin 2c receptor pre-mRNA by a helix-threading peptide Org. Biomol. Chem. 8, 4898-4904
-
(2010)
Org. Biomol. Chem.
, vol.8
, pp. 4898-4904
-
-
Schirle, N.T.1
Goodman, R.A.2
Krishnamurthy, M.3
Beal, P.A.4
-
36
-
-
34548554580
-
Probing adenosine-to-inosine editing reactions using RNA-containing nucleoside analogs
-
Maydanovych, O., Easterwood, L. M., Cui, T., Veliz, E. A., Pokharel, S., and Beal, P. A. (2007) Probing adenosine-to-inosine editing reactions using RNA-containing nucleoside analogs Methods Enzymol. 424, 369-386
-
(2007)
Methods Enzymol.
, vol.424
, pp. 369-386
-
-
Maydanovych, O.1
Easterwood, L.M.2
Cui, T.3
Veliz, E.A.4
Pokharel, S.5
Beal, P.A.6
-
37
-
-
53649088131
-
Applications of next-generation sequencing technologies in functional genomics
-
Morozova, O. and Marra, M. A. (2008) Applications of next-generation sequencing technologies in functional genomics Genomics 92, 255-264
-
(2008)
Genomics
, vol.92
, pp. 255-264
-
-
Morozova, O.1
Marra, M.A.2
-
38
-
-
33745926178
-
Sensitive mutation detection in heterogeneous cancer specimens by massively parallel picoliter reactor sequencing
-
Thomas, R. K., Nickerson, E., Simons, J. F., Janne, P. A., Tengs, T., Yuza, Y., Garraway, L. A., LaFramboise, T., Lee, J. C., Shah, K., O'Neill, K., Sasaki, H., Lindeman, N., Wong, K. K., Borras, A. M., Gutmann, E. J., Dragnev, K. H., DeBiasi, R., Chen, T. H., Glatt, K. A., Greulich, H., Desany, B., Lubeski, C. K., Brockman, W., Alvarez, P., Hutchison, S. K., Leamon, J. H., Ronan, M. T., Turenchalk, G. S., Egholm, M., Sellers, W. R., Rothberg, J. M., and Meyerson, M. (2006) Sensitive mutation detection in heterogeneous cancer specimens by massively parallel picoliter reactor sequencing Nat. Med. 12, 852-855
-
(2006)
Nat. Med.
, vol.12
, pp. 852-855
-
-
Thomas, R.K.1
Nickerson, E.2
Simons, J.F.3
Janne, P.A.4
Tengs, T.5
Yuza, Y.6
Garraway, L.A.7
Laframboise, T.8
Lee, J.C.9
Shah, K.10
O'Neill, K.11
Sasaki, H.12
Lindeman, N.13
Wong, K.K.14
Borras, A.M.15
Gutmann, E.J.16
Dragnev, K.H.17
Debiasi, R.18
Chen, T.H.19
Glatt, K.A.20
Greulich, H.21
Desany, B.22
Lubeski, C.K.23
Brockman, W.24
Alvarez, P.25
Hutchison, S.K.26
Leamon, J.H.27
Ronan, M.T.28
Turenchalk, G.S.29
Egholm, M.30
Sellers, W.R.31
Rothberg, J.M.32
Meyerson, M.33
more..
-
39
-
-
84866483171
-
A comparison of direct sequencing, pyrosequencing, high resolution melting analysis, TheraScreen DxS, and the K-ras StripAssay for detecting KRAS mutations in non small cell lung carcinomas
-
Jancik, S., Drabek, J., Berkovcova, J., Xu, Y. Z., Stankova, M., Klein, J., Kolek, V., Skarda, J., Tichy, T., Grygarkova, I., Radzioch, D., and Hajduch, M. (2012) A comparison of direct sequencing, pyrosequencing, high resolution melting analysis, TheraScreen DxS, and the K-ras StripAssay for detecting KRAS mutations in non small cell lung carcinomas J. Exp. Clin. Cancer Res. 31, 79
-
(2012)
J. Exp. Clin. Cancer Res.
, vol.31
, pp. 79
-
-
Jancik, S.1
Drabek, J.2
Berkovcova, J.3
Xu, Y.Z.4
Stankova, M.5
Klein, J.6
Kolek, V.7
Skarda, J.8
Tichy, T.9
Grygarkova, I.10
Radzioch, D.11
Hajduch, M.12
-
40
-
-
0344035669
-
The importance of internal loops within RNA substrates of ADAR1
-
Lehmann, K. A. and Bass, B. L. (1999) The importance of internal loops within RNA substrates of ADAR1 J. Mol. Biol. 291, 1-13
-
(1999)
J. Mol. Biol.
, vol.291
, pp. 1-13
-
-
Lehmann, K.A.1
Bass, B.L.2
-
41
-
-
0034711082
-
Double-stranded RNA adenosine deaminases ADAR1 and ADAR2 have overlapping specificities
-
Lehmann, K. A. and Bass, B. L. (2000) Double-stranded RNA adenosine deaminases ADAR1 and ADAR2 have overlapping specificities Biochemistry 39, 12875-12884
-
(2000)
Biochemistry
, vol.39
, pp. 12875-12884
-
-
Lehmann, K.A.1
Bass, B.L.2
-
42
-
-
1042289731
-
Structure and sequence determinants required for the RNA editing of ADAR2 substrates
-
Dawson, T. R., Sansam, C. L., and Emeson, R. B. (2004) Structure and sequence determinants required for the RNA editing of ADAR2 substrates J. Biol. Chem. 279, 4941-4951
-
(2004)
J. Biol. Chem.
, vol.279
, pp. 4941-4951
-
-
Dawson, T.R.1
Sansam, C.L.2
Emeson, R.B.3
-
43
-
-
0025017157
-
Saccharomyces-cerevisiae U1 small nuclear-RNA secondary structure contains both universal and yeast-specific domains
-
Kretzner, L., Krol, A., and Rosbash, M. (1990) Saccharomyces-cerevisiae U1 small nuclear-RNA secondary structure contains both universal and yeast-specific domains Proc. Natl. Acad. Sci. U. S. A. 87, 851-855
-
(1990)
Proc. Natl. Acad. Sci. U. S. A.
, vol.87
, pp. 851-855
-
-
Kretzner, L.1
Krol, A.2
Rosbash, M.3
-
44
-
-
0030924389
-
Variable regions V13 and V3 of Saccharomyces cerevisiae contain structural features essential for normal biogenesis and stability of 5.8S and 25S rRNA
-
Jeeninga, R. E., Van Delft, Y., de Graaff-Vincent, M., Dirks-Mulder, A., Venema, J., and Raue, H. A. (1997) Variable regions V13 and V3 of Saccharomyces cerevisiae contain structural features essential for normal biogenesis and stability of 5.8S and 25S rRNA RNA 3, 476-488
-
(1997)
RNA
, vol.3
, pp. 476-488
-
-
Jeeninga, R.E.1
Van Delft, Y.2
De Graaff-Vincent, M.3
Dirks-Mulder, A.4
Venema, J.5
Raue, H.A.6
-
45
-
-
59649092854
-
Messenger RNA targeting to endoplasmic reticulum stress signalling sites
-
Aragon, T., van Anken, E., Pincus, D., Serafimova, I. M., Korennykh, A. V., Rubio, C. A., and Walter, P. (2009) Messenger RNA targeting to endoplasmic reticulum stress signalling sites Nature 457, 736-740
-
(2009)
Nature
, vol.457
, pp. 736-740
-
-
Aragon, T.1
Van Anken, E.2
Pincus, D.3
Serafimova, I.M.4
Korennykh, A.V.5
Rubio, C.A.6
Walter, P.7
-
46
-
-
4644234057
-
The binding selectivity of ADAR2's dsRBMs contributes to RNA-editing selectivity
-
Stephens, O. M., Haudenschild, B. L., and Beal, P. A. (2004) The binding selectivity of ADAR2's dsRBMs contributes to RNA-editing selectivity Chem. Biol. 11, 1239-1250
-
(2004)
Chem. Biol.
, vol.11
, pp. 1239-1250
-
-
Stephens, O.M.1
Haudenschild, B.L.2
Beal, P.A.3
-
47
-
-
0030067869
-
Editing of the GLuR-B ion channel RNA in vitro by recombinant double-stranded RNA adenosine deaminase
-
Dabiri, G. A., Lai, F., Drakas, R. A., and Nishikura, K. (1996) Editing of the GLuR-B ion channel RNA in vitro by recombinant double-stranded RNA adenosine deaminase EMBO J. 15, 34-45
-
(1996)
EMBO J.
, vol.15
, pp. 34-45
-
-
Dabiri, G.A.1
Lai, F.2
Drakas, R.A.3
Nishikura, K.4
-
49
-
-
0034724219
-
Induction of basal cell carcinomas and trichoepitheliomas in mice overexpressing GLI-1
-
Nilsson, M., Unden, A. B., Krause, D., Malmqwist, U., Raza, K., Zaphiropoulos, P. G., and Toftgard, R. (2000) Induction of basal cell carcinomas and trichoepitheliomas in mice overexpressing GLI-1 Proc. Natl. Acad. Sci. U. S. A. 97, 3438-3443
-
(2000)
Proc. Natl. Acad. Sci. U. S. A.
, vol.97
, pp. 3438-3443
-
-
Nilsson, M.1
Unden, A.B.2
Krause, D.3
Malmqwist, U.4
Raza, K.5
Zaphiropoulos, P.G.6
Toftgard, R.7
-
50
-
-
0028641157
-
Hac1: A novel yeast bZIP protein binding to the CRE motif is a multicopy suppressor for cdc10 mutant of Schizosaccharomyces pombe
-
Nojima, H., Leem, S. H., Araki, H., Sakai, A., Nakashima, N., Kanaoka, Y., and Ono, Y. (1994) Hac1: a novel yeast bZIP protein binding to the CRE motif is a multicopy suppressor for cdc10 mutant of Schizosaccharomyces pombe Nucleic Acids Res. 22, 5279-5288
-
(1994)
Nucleic Acids Res.
, vol.22
, pp. 5279-5288
-
-
Nojima, H.1
Leem, S.H.2
Araki, H.3
Sakai, A.4
Nakashima, N.5
Kanaoka, Y.6
Ono, Y.7
-
51
-
-
0032509939
-
Splicing: HACking into the unfolded-protein response
-
Shamu, C. E. (1998) Splicing: HACking into the unfolded-protein response Curr. Biol. 8, R121-R123
-
(1998)
Curr. Biol.
, vol.8
-
-
Shamu, C.E.1
-
52
-
-
2442672951
-
Bromodomain factor 1 (Bdf1) is phosphorylated by protein kinase CK2
-
Sawa, C., Nedea, E., Krogan, N., Wada, T., Handa, H., Greenblatt, J., and Buratowski, S. (2004) Bromodomain factor 1 (Bdf1) is phosphorylated by protein kinase CK2 Mol. Cell. Biol. 24, 4734-4742
-
(2004)
Mol. Cell. Biol.
, vol.24
, pp. 4734-4742
-
-
Sawa, C.1
Nedea, E.2
Krogan, N.3
Wada, T.4
Handa, H.5
Greenblatt, J.6
Buratowski, S.7
-
53
-
-
0024233053
-
An unwinding activity that covalently modifies its double-stranded RNA substrate
-
Bass, B. L. and Weintraub, H. (1988) An unwinding activity that covalently modifies its double-stranded RNA substrate Cell 55, 1089-1098
-
(1988)
Cell
, vol.55
, pp. 1089-1098
-
-
Bass, B.L.1
Weintraub, H.2
-
54
-
-
18444380595
-
The double-stranded RNA-binding motif, a versatile macromolecular docking platform
-
Chang, K. Y. and Ramos, A. (2005) The double-stranded RNA-binding motif, a versatile macromolecular docking platform FEBS J. 272, 2109-2117
-
(2005)
FEBS J.
, vol.272
, pp. 2109-2117
-
-
Chang, K.Y.1
Ramos, A.2
-
55
-
-
0025268577
-
Human U2 snRNA can function in pre-mRNA splicing in yeast
-
Shuster, E. O. and Guthrie, C. (1990) Human U2 snRNA can function in pre-mRNA splicing in yeast Nature 345, 270-273
-
(1990)
Nature
, vol.345
, pp. 270-273
-
-
Shuster, E.O.1
Guthrie, C.2
-
56
-
-
84868106296
-
A distant cis acting intronic element induces site-selective RNA editing
-
Daniel, C., Veno, M. T., Ekdahl, Y., Kjems, J., and Ohman, M. (2012) A distant cis acting intronic element induces site-selective RNA editing Nucleic Acids Res. 40, 9876-9886
-
(2012)
Nucleic Acids Res.
, vol.40
, pp. 9876-9886
-
-
Daniel, C.1
Veno, M.T.2
Ekdahl, Y.3
Kjems, J.4
Ohman, M.5
-
57
-
-
0025110720
-
Mutations define essential and nonessential U2 RNA structures
-
Ares, M., Jr. and Igel, A. H. (1990) Mutations define essential and nonessential U2 RNA structures Mol. Biol. Rep. 14, 131-132
-
(1990)
Mol. Biol. Rep.
, vol.14
, pp. 131-132
-
-
Ares Jr., M.1
Igel, A.H.2
-
58
-
-
0025785531
-
Limited functional equivalence of phylogenetic variation in small nuclear RNA: Yeast U2 RNA with altered branchpoint complementarity inhibits splicing and produces a dominant lethal phenotype
-
Miraglia, L., Seiwert, S., Igel, A. H., and Ares, M., Jr. (1991) Limited functional equivalence of phylogenetic variation in small nuclear RNA: yeast U2 RNA with altered branchpoint complementarity inhibits splicing and produces a dominant lethal phenotype Proc. Natl. Acad. Sci. U. S. A. 88, 7061-7065
-
(1991)
Proc. Natl. Acad. Sci. U. S. A.
, vol.88
, pp. 7061-7065
-
-
Miraglia, L.1
Seiwert, S.2
Igel, A.H.3
Ares Jr., M.4
-
59
-
-
4644339417
-
Evidence for auto-inhibition by the N terminus of hADAR2 and activation by dsRNA binding
-
Macbeth, M. R., Lingam, A. T., and Bass, B. L. (2004) Evidence for auto-inhibition by the N terminus of hADAR2 and activation by dsRNA binding RNA 10, 1563-1571
-
(2004)
RNA
, vol.10
, pp. 1563-1571
-
-
MacBeth, M.R.1
Lingam, A.T.2
Bass, B.L.3
-
60
-
-
0035851115
-
Conformational changes that occur during an RNA-editing adenosine deamination reaction
-
Yi-Brunozzi, H. Y., Stephens, O. M., and Beal, P. A. (2001) Conformational changes that occur during an RNA-editing adenosine deamination reaction J. Biol. Chem. 276, 37827-37833
-
(2001)
J. Biol. Chem.
, vol.276
, pp. 37827-37833
-
-
Yi-Brunozzi, H.Y.1
Stephens, O.M.2
Beal, P.A.3
-
61
-
-
84878219205
-
A simple fluorescence method for pK(a) determination in RNA and DNA reveals highly shifted pK(a)'s
-
Wilcox, J. L. and Bevilacqua, P. C. (2013) A simple fluorescence method for pK(a) determination in RNA and DNA reveals highly shifted pK(a)'s J. Am. Chem. Soc. 135, 7390-7393
-
(2013)
J. Am. Chem. Soc.
, vol.135
, pp. 7390-7393
-
-
Wilcox, J.L.1
Bevilacqua, P.C.2
-
62
-
-
32044468729
-
Structure and specific RNA binding of ADAR2 double-stranded RNA binding motifs
-
Stefl, R., Xu, M., Skrisovska, L., Emeson, R. B., and Allain, F. H. (2006) Structure and specific RNA binding of ADAR2 double-stranded RNA binding motifs Structure 14, 345-355
-
(2006)
Structure
, vol.14
, pp. 345-355
-
-
Stefl, R.1
Xu, M.2
Skrisovska, L.3
Emeson, R.B.4
Allain, F.H.5
-
63
-
-
69049117276
-
Matching active site and substrate structures for an RNA editing reaction
-
Pokharel, S., Jayalath, P., Maydanovych, O., Goodman, R. A., Wang, S. C., Tantillo, D. J., and Beal, P. A. (2009) Matching active site and substrate structures for an RNA editing reaction J. Am. Chem. Soc. 131, 11882-11891
-
(2009)
J. Am. Chem. Soc.
, vol.131
, pp. 11882-11891
-
-
Pokharel, S.1
Jayalath, P.2
Maydanovych, O.3
Goodman, R.A.4
Wang, S.C.5
Tantillo, D.J.6
Beal, P.A.7
|