-
1
-
-
33847250395
-
Mouse and rat BDNF gene structure and expression revisited
-
doi: 10.1002/jnr.21139
-
Aid, T., Kazantseva, A., Piirsoo, M., Palm, K., and Timmusk, T. (2007). Mouse and rat BDNF gene structure and expression revisited. J. Neurosci. Res. 85, 525-535. doi: 10.1002/jnr.21139
-
(2007)
J. Neurosci. Res.
, vol.85
, pp. 525-535
-
-
Aid, T.1
Kazantseva, A.2
Piirsoo, M.3
Palm, K.4
Timmusk, T.5
-
2
-
-
84876899530
-
Integrated transcriptional and competitive endogenous RNA networks are cross-regulated in permissive molecular environments
-
doi: 10.1073/pnas.1222509110
-
Ala, U., Karreth, F. A., Bosia, C., Pagnani, A., Taulli, R., Leopold, V., et al. (2013). Integrated transcriptional and competitive endogenous RNA networks are cross-regulated in permissive molecular environments. Proc. Natl. Acad. Sci. U.S.A. 110, 7154-7159. doi: 10.1073/pnas.1222509110
-
(2013)
Proc. Natl. Acad. Sci. U.S.A.
, vol.110
, pp. 7154-7159
-
-
Ala, U.1
Karreth, F.A.2
Bosia, C.3
Pagnani, A.4
Taulli, R.5
Leopold, V.6
-
3
-
-
84897108067
-
The long non-coding RNA Gomafu is acutely regulated in response to neuronal activation and involved in schizophrenia-associated alternative splicing
-
doi: 10.1038/mp.2013.45 [Epub ahead of print]
-
Barry, G., Briggs, J. A., Vanichkina, D. P., Poth, E. M., Beveridge, N. J., Ratnu, V. S., et al. (2013). The long non-coding RNA Gomafu is acutely regulated in response to neuronal activation and involved in schizophrenia-associated alternative splicing. Mol. Psychiatry doi: 10.1038/mp.2013.45 [Epub ahead of print].
-
(2013)
Mol. Psychiatry
-
-
Barry, G.1
Briggs, J.A.2
Vanichkina, D.P.3
Poth, E.M.4
Beveridge, N.J.5
Ratnu, V.S.6
-
4
-
-
84875200257
-
Long noncoding RNAs: Cellular address codes in development and disease
-
doi: 10.1016/j.cell.2013.02.012
-
Batista, P. J., and Chang, H. Y. (2013). Long noncoding RNAs: cellular address codes in development and disease. Cell 152, 1298-1307. doi: 10.1016/j.cell.2013.02.012
-
(2013)
Cell
, vol.152
, pp. 1298-1307
-
-
Batista, P.J.1
Chang, H.Y.2
-
5
-
-
34250305146
-
Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project
-
doi: 10.1038/nature05874
-
Birney, E., Stamatoyannopoulos, J. A., Dutta, A., Guigo, R., Gingeras, T. R., Margulies, E. H., et al. (2007). Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project. Nature 447, 799-816. doi: 10.1038/nature05874
-
(2007)
Nature
, vol.447
, pp. 799-816
-
-
Birney, E.1
Stamatoyannopoulos, J.A.2
Dutta, A.3
Guigo, R.4
Gingeras, T.R.5
Margulies, E.H.6
-
6
-
-
68149182666
-
Balanced gene regulation by an embryonic brain ncRNA is critical for adult hippocampal GABA circuitry
-
doi: 10.1038/nn.2371
-
Bond, A. M., Vangompel, M. J., Sametsky, E. A., Clark, M. F., Savage, J. C., Disterhoft, J. F., et al. (2009). Balanced gene regulation by an embryonic brain ncRNA is critical for adult hippocampal GABA circuitry. Nat. Neurosci. 12, 1020-1027. doi: 10.1038/nn.2371
-
(2009)
Nat. Neurosci.
, vol.12
, pp. 1020-1027
-
-
Bond, A.M.1
Vangompel, M.J.2
Sametsky, E.A.3
Clark, M.F.4
Savage, J.C.5
Disterhoft, J.F.6
-
7
-
-
84866665985
-
The DMD locus harbours multiple long non-coding RNAs which orchestrate and control transcription of muscle dystrophin mRNA isoforms
-
doi: 10.1371/journal.pone.0045328
-
Bovolenta, M., Erriquez, D., Valli, E., Brioschi, S., Scotton, C., Neri, M., et al. (2012). The DMD locus harbours multiple long non-coding RNAs which orchestrate and control transcription of muscle dystrophin mRNA isoforms. PLoS ONE 7:e45328. doi: 10.1371/journal.pone.0045328
-
(2012)
PLoS ONE
, vol.7
-
-
Bovolenta, M.1
Erriquez, D.2
Valli, E.3
Brioschi, S.4
Scotton, C.5
Neri, M.6
-
8
-
-
84860885909
-
A long ncRNA links copy number variation to a polycomb/trithorax epigenetic switch in FSHD muscular dystrophy
-
doi: 10.1016/j.cell.2012.03.035
-
Cabianca, D. S., Casa, V., Bodega, B., Xynos, A., Ginelli, E., Tanaka, Y., et al. (2012). A long ncRNA links copy number variation to a polycomb/trithorax epigenetic switch in FSHD muscular dystrophy. Cell 149, 819-831. doi: 10.1016/j.cell.2012.03.035
-
(2012)
Cell
, vol.149
, pp. 819-831
-
-
Cabianca, D.S.1
Casa, V.2
Bodega, B.3
Xynos, A.4
Ginelli, E.5
Tanaka, Y.6
-
9
-
-
24644519490
-
The transcriptional landscape of the mammalian genome
-
doi: 10.1126/science.1112014
-
Carninci, P., Kasukawa, T., Katayama, S., Gough, J., Frith, M. C., Maeda, N., et al. (2005). The transcriptional landscape of the mammalian genome. Science 309, 1559-1563. doi: 10.1126/science.1112014
-
(2005)
Science
, vol.309
, pp. 1559-1563
-
-
Carninci, P.1
Kasukawa, T.2
Katayama, S.3
Gough, J.4
Frith, M.C.5
Maeda, N.6
-
10
-
-
84869088820
-
Long non-coding antisense RNA controls Uchl1 translation through an embedded SINEB2 repeat
-
doi: 10.1038/nature11508
-
Carrieri, C., Cimatti, L., Biagioli, M., Beugnet, A., Zucchelli, S., Fedele, S., et al. (2012). Long non-coding antisense RNA controls Uchl1 translation through an embedded SINEB2 repeat. Nature 491, 454-457. doi: 10.1038/nature11508
-
(2012)
Nature
, vol.491
, pp. 454-457
-
-
Carrieri, C.1
Cimatti, L.2
Biagioli, M.3
Beugnet, A.4
Zucchelli, S.5
Fedele, S.6
-
11
-
-
80054715378
-
A long noncoding RNA controls muscle differentiation by functioning as a competing endogenous RNA
-
doi: 10.1016/j.cell.2011.09.028
-
Cesana, M., Cacchiarelli, D., Legnini, I., Santini, T., Sthandier, O., Chinappi, M., et al. (2011). A long noncoding RNA controls muscle differentiation by functioning as a competing endogenous RNA. Cell 147, 358-369. doi: 10.1016/j.cell.2011.09.028
-
(2011)
Cell
, vol.147
, pp. 358-369
-
-
Cesana, M.1
Cacchiarelli, D.2
Legnini, I.3
Santini, T.4
Sthandier, O.5
Chinappi, M.6
-
12
-
-
0014937223
-
Central dogma of molecular biology
-
doi: 10.1038/227561a0
-
Crick, F. (1970). Central dogma of molecular biology. Nature 227, 561-563. doi: 10.1038/227561a0
-
(1970)
Nature
, vol.227
, pp. 561-563
-
-
Crick, F.1
-
13
-
-
78650306521
-
Small RNA sorting: Matchmaking for Argonautes
-
doi: 10.1038/nrg2916
-
Czech, B., and Hannon, G. J. (2011). Small RNA sorting: matchmaking for Argonautes. Nat. Rev. Genet. 12, 19-31. doi: 10.1038/nrg2916
-
(2011)
Nat. Rev. Genet.
, vol.12
, pp. 19-31
-
-
Czech, B.1
Hannon, G.J.2
-
14
-
-
81355142141
-
Non-coding RNAs in human disease
-
doi: 10.1038/nrg3074
-
Esteller, M. (2011). Non-coding RNAs in human disease. Nat. Rev. Genet. 12, 861-874. doi: 10.1038/nrg3074
-
(2011)
Nat. Rev. Genet.
, vol.12
, pp. 861-874
-
-
Esteller, M.1
-
15
-
-
46749083733
-
Expression of a noncoding RNA is elevated in Alzheimer's disease and drives rapid feed-forward regulation of beta-secretase
-
doi: 10.1038/nm1784
-
Faghihi, M. A., Modarresi, F., Khalil, A. M., Wood, D. E., Sahagan, B. G., Morgan, T. E., et al. (2008). Expression of a noncoding RNA is elevated in Alzheimer's disease and drives rapid feed-forward regulation of beta-secretase. Nat. Med. 14, 723-730. doi: 10.1038/nm1784
-
(2008)
Nat. Med.
, vol.14
, pp. 723-730
-
-
Faghihi, M.A.1
Modarresi, F.2
Khalil, A.M.3
Wood, D.E.4
Sahagan, B.G.5
Morgan, T.E.6
-
16
-
-
84874025014
-
The NeST long ncRNA controls microbial susceptibility and epigenetic activation of the interferon-gamma locus
-
doi: 10.1016/j.cell.2013.01.015
-
Gomez, J. A., Wapinski, O. L., Yang, Y. W., Bureau, J. F., Gopinath, S., Monack, D. M., et al. (2013). The NeST long ncRNA controls microbial susceptibility and epigenetic activation of the interferon-gamma locus. Cell 152, 743-754. doi: 10.1016/j.cell.2013.01.015
-
(2013)
Cell
, vol.152
, pp. 743-754
-
-
Gomez, J.A.1
Wapinski, O.L.2
Yang, Y.W.3
Bureau, J.F.4
Gopinath, S.5
Monack, D.M.6
-
17
-
-
79951495822
-
LncRNAs transactivate STAU1-mediated mRNA decay by duplexing with 3′ UTRs via Alu elements
-
doi: 10.1038/nature09701
-
Gong, C., and Maquat, L. E. (2011). lncRNAs transactivate STAU1-mediated mRNA decay by duplexing with 3′ UTRs via Alu elements. Nature 470, 284-288. doi: 10.1038/nature09701
-
(2011)
Nature
, vol.470
, pp. 284-288
-
-
Gong, C.1
Maquat, L.E.2
-
18
-
-
84873829893
-
The tissue-specific lncRNA Fendrr is an essential regulator of heart and body wall development in the mouse
-
doi: 10.1016/j.devcel.2012.12.012
-
Grote, P., Wittler, L., Hendrix, D., Koch, F., Wahrisch, S., Beisaw, A., et al. (2013). The tissue-specific lncRNA Fendrr is an essential regulator of heart and body wall development in the mouse. Dev. Cell 24, 206-214. doi: 10.1016/j.devcel.2012.12.012
-
(2013)
Dev. Cell
, vol.24
, pp. 206-214
-
-
Grote, P.1
Wittler, L.2
Hendrix, D.3
Koch, F.4
Wahrisch, S.5
Beisaw, A.6
-
19
-
-
84879969127
-
Ribosome profiling provides evidence that large noncoding RNAs do not encode proteins
-
doi: 10.1016/j.cell.2013.06.009
-
Guttman, M., Russell, P., Ingolia, N. T., Weissman, J. S., and Lander, E. S. (2013). Ribosome profiling provides evidence that large noncoding RNAs do not encode proteins. Cell 154, 240-251. doi: 10.1016/j.cell.2013.06.009
-
(2013)
Cell
, vol.154
, pp. 240-251
-
-
Guttman, M.1
Russell, P.2
Ingolia, N.T.3
Weissman, J.S.4
Lander, E.S.5
-
20
-
-
78650966670
-
Vernalization-mediated epigenetic silencing by a long intronic noncoding RNA
-
doi: 10.1126/science.1197349
-
Heo, J. B., and Sung, S. (2011). Vernalization-mediated epigenetic silencing by a long intronic noncoding RNA. Science 331, 76-79. doi: 10.1126/science.1197349
-
(2011)
Science
, vol.331
, pp. 76-79
-
-
Heo, J.B.1
Sung, S.2
-
21
-
-
84881579993
-
In vitro-differentiated neural cell cultures progress towards donor-identical brain tissue
-
doi: 10.1093/hmg/ddt208
-
Hjelm, B. E., Salhia, B., Kurdoglu, A., Szelinger, S., Reiman, R. A., Sue, L. I., et al. (2013). In vitro-differentiated neural cell cultures progress towards donor-identical brain tissue. Hum. Mol. Genet. 22, 3534-3546. doi: 10.1093/hmg/ddt208
-
(2013)
Hum. Mol. Genet.
, vol.22
, pp. 3534-3546
-
-
Hjelm, B.E.1
Salhia, B.2
Kurdoglu, A.3
Szelinger, S.4
Reiman, R.A.5
Sue, L.I.6
-
22
-
-
77749279749
-
Neural differentiation of human induced pluripotent stem cells follows developmental principles but with variable potency
-
doi: 10.1073/pnas.0910012107
-
Hu, B. Y., Weick, J. P., Yu, J., Ma, L. X., Zhang, X. Q., Thomson, J. A., et al. (2010). Neural differentiation of human induced pluripotent stem cells follows developmental principles but with variable potency. Proc. Natl. Acad. Sci. U.S.A. 107, 4335-4340. doi: 10.1073/pnas.0910012107
-
(2010)
Proc. Natl. Acad. Sci. U.S.A.
, vol.107
, pp. 4335-4340
-
-
Hu, B.Y.1
Weick, J.P.2
Yu, J.3
Ma, L.X.4
Zhang, X.Q.5
Thomson, J.A.6
-
23
-
-
77955323879
-
A large intergenic noncoding RNA induced by p53 mediates global gene repression in the p53 response
-
doi: 10.1016/j.cell.2010.06.040
-
Huarte, M., Guttman, M., Feldser, D., Garber, M., Koziol, M. J., Kenzelmann-Broz, D., et al. (2010). A large intergenic noncoding RNA induced by p53 mediates global gene repression in the p53 response. Cell 142, 409-419. doi: 10.1016/j.cell.2010.06.040
-
(2010)
Cell
, vol.142
, pp. 409-419
-
-
Huarte, M.1
Guttman, M.2
Feldser, D.3
Garber, M.4
Koziol, M.J.5
Kenzelmann-Broz, D.6
-
24
-
-
84862781818
-
New and Xisting regulatory mechanisms of X chromosome inactivation
-
doi: 10.1016/j.gde.2012.02.007
-
Jeon, Y., Sarma, K., and Lee, J. T. (2012). New and Xisting regulatory mechanisms of X chromosome inactivation. Curr. Opin. Genet. Dev. 22, 62-71. doi: 10.1016/j.gde.2012.02.007
-
(2012)
Curr. Opin. Genet. Dev.
, vol.22
, pp. 62-71
-
-
Jeon, Y.1
Sarma, K.2
Lee, J.T.3
-
25
-
-
84873300214
-
Braveheart, a long noncoding RNA required for cardiovascular lineage commitment
-
doi: 10.1016/j.cell.2013.01.003
-
Klattenhoff, C. A., Scheuermann, J. C., Surface, L. E., Bradley, R. K., Fields, P. A., Steinhauser, M. L., et al. (2013). Braveheart, a long noncoding RNA required for cardiovascular lineage commitment. Cell 152, 570-583. doi: 10.1016/j.cell.2013.01.003
-
(2013)
Cell
, vol.152
, pp. 570-583
-
-
Klattenhoff, C.A.1
Scheuermann, J.C.2
Surface, L.E.3
Bradley, R.K.4
Fields, P.A.5
Steinhauser, M.L.6
-
26
-
-
84872135457
-
Control of somatic tissue differentiation by the long non-coding RNA TINCR
-
doi: 10.1038/nature11661
-
Kretz, M., Siprashvili, Z., Chu, C., Webster, D. E., Zehnder, A., Qu, K., et al. (2013). Control of somatic tissue differentiation by the long non-coding RNA TINCR. Nature493, 231-235. doi: 10.1038/nature11661
-
(2013)
Nature
, vol.493
, pp. 231-235
-
-
Kretz, M.1
Siprashvili, Z.2
Chu, C.3
Webster, D.E.4
Zehnder, A.5
Qu, K.6
-
27
-
-
0025255313
-
Catalytic RNA and the origin of genetic systems
-
doi: 10.1016/0168-9525(90)90148-Y
-
Lamond, A. I., and Gibson, T. J. (1990). Catalytic RNA and the origin of genetic systems. Trends Genet. 6, 145-149. doi: 10.1016/0168-9525(90)90148-Y
-
(1990)
Trends Genet.
, vol.6
, pp. 145-149
-
-
Lamond, A.I.1
Gibson, T.J.2
-
28
-
-
84871069553
-
Epigenetic regulation by long noncoding RNAs
-
doi: 10.1126/science.1231776
-
Lee, J. T. (2012). Epigenetic regulation by long noncoding RNAs. Science 338, 1435-1439. doi: 10.1126/science.1231776
-
(2012)
Science
, vol.338
, pp. 1435-1439
-
-
Lee, J.T.1
-
29
-
-
79959446962
-
PhyloCSF: A comparative genomics method to distinguish protein coding and non-coding regions
-
doi: 10.1093/bioinformatics/btr209
-
Lin, M. F., Jungreis, I., and Kellis, M. (2011). PhyloCSF: a comparative genomics method to distinguish protein coding and non-coding regions. Bioinformatics 27, i275-282. doi: 10.1093/bioinformatics/btr209
-
(2011)
Bioinformatics
, vol.27
-
-
Lin, M.F.1
Jungreis, I.2
Kellis, M.3
-
30
-
-
75349113672
-
Molecular networks involved in mouse cerebral corticogenesis and spatio-temporal regulation of Sox4 and Sox11 novel antisense transcripts revealed by transcriptome profiling
-
doi: 10.1186/gb-2009-10-10-r104
-
Ling, K. H., Hewitt, C. A., Beissbarth, T., Hyde, L., Banerjee, K., Cheah, P. S., et al. (2009). Molecular networks involved in mouse cerebral corticogenesis and spatio-temporal regulation of Sox4 and Sox11 novel antisense transcripts revealed by transcriptome profiling. Genome Biol. 10, R104. doi: 10.1186/gb-2009-10-10-r104
-
(2009)
Genome Biol.
, vol.10
-
-
Ling, K.H.1
Hewitt, C.A.2
Beissbarth, T.3
Hyde, L.4
Banerjee, K.5
Cheah, P.S.6
-
31
-
-
79951837277
-
Spatiotemporal regulation of multiple overlapping sense and novel natural antisense transcripts at the Nrgn and Camk2n1 gene loci during mouse cerebral corticogenesis
-
doi: 10.1093/cercor/bhq141
-
Ling, K. H., Hewitt, C. A., Beissbarth, T., Hyde, L., Cheah, P. S., Smyth, G. K., et al. (2011). Spatiotemporal regulation of multiple overlapping sense and novel natural antisense transcripts at the Nrgn and Camk2n1 gene loci during mouse cerebral corticogenesis. Cereb. Cortex 21, 683-697. doi: 10.1093/cercor/bhq141
-
(2011)
Cereb. Cortex
, vol.21
, pp. 683-697
-
-
Ling, K.H.1
Hewitt, C.A.2
Beissbarth, T.3
Hyde, L.4
Cheah, P.S.5
Smyth, G.K.6
-
32
-
-
84874780403
-
The vast, conserved mammalian lincRNome
-
doi: 10.1371/journal.pcbi.1002917
-
Managadze, D., Lobkovsky, A. E., Wolf, Y. I., Shabalina, S. A., Rogozin, I. B., and Koonin, E. V. (2013). The vast, conserved mammalian lincRNome. PLoS Comput. Biol.9:e1002917. doi: 10.1371/journal.pcbi.1002917
-
(2013)
PLoS Comput. Biol.
, vol.9
-
-
Managadze, D.1
Lobkovsky, A.E.2
Wolf, Y.I.3
Shabalina, S.A.4
Rogozin, I.B.5
Koonin, E.V.6
-
33
-
-
84873456575
-
ERNAs are required for p53-dependent enhancer activity and gene transcription
-
doi: 10.1016/j.molcel.2012.11.021
-
Melo, C. A., Drost, J., Wijchers, P. J., Van De Werken, H., De Wit, E., Oude Vrielink, J. A., et al. (2013). eRNAs are required for p53-dependent enhancer activity and gene transcription. Mol. Cell 49, 524-535. doi: 10.1016/j.molcel.2012.11.021
-
(2013)
Mol. Cell
, vol.49
, pp. 524-535
-
-
Melo, C.A.1
Drost, J.2
Wijchers, P.J.3
Van De Werken, H.4
De Wit, E.5
Oude Vrielink, J.A.6
-
34
-
-
0030461398
-
Requirement for a noncoding RNA in Drosophila polar granules for germ cell establishment
-
doi: 10.1126/science.274.5295.2075
-
Nakamura, A., Amikura, R., Mukai, M., Kobayashi, S., and Lasko, P. F. (1996). Requirement for a noncoding RNA in Drosophila polar granules for germ cell establishment. Science 274, 2075-2079. doi: 10.1126/science.274.5295.2075
-
(1996)
Science
, vol.274
, pp. 2075-2079
-
-
Nakamura, A.1
Amikura, R.2
Mukai, M.3
Kobayashi, S.4
Lasko, P.F.5
-
35
-
-
0033598827
-
Neural restrictive silencer factor recruits mSin3 and histone deacetylase complex to repress neuron-specific target genes
-
doi: 10.1073/pnas.96.24.13691
-
Naruse, Y., Aoki, T., Kojima, T., and Mori, N. (1999). Neural restrictive silencer factor recruits mSin3 and histone deacetylase complex to repress neuron-specific target genes. Proc. Natl. Acad. Sci. U.S.A. 96, 13691-13696. doi: 10.1073/pnas.96.24.13691
-
(1999)
Proc. Natl. Acad. Sci. U.S.A.
, vol.96
, pp. 13691-13696
-
-
Naruse, Y.1
Aoki, T.2
Kojima, T.3
Mori, N.4
-
36
-
-
84856492490
-
Human long non-coding RNAs promote pluripotency and neuronal differentiation by association with chromatin modifiers and transcription factors
-
doi: 10.1038/emboj.2011.459
-
Ng, S. Y., Johnson, R., and Stanton, L. W. (2012). Human long non-coding RNAs promote pluripotency and neuronal differentiation by association with chromatin modifiers and transcription factors. EMBO J. 31, 522-533. doi: 10.1038/emboj.2011.459
-
(2012)
EMBO J.
, vol.31
, pp. 522-533
-
-
Ng, S.Y.1
Johnson, R.2
Stanton, L.W.3
-
37
-
-
84883769504
-
Rise of the RNA machines: Exploring the structure of long non-coding RNAs
-
doi: 10.1016/j.jmb.2013.02.030
-
Novikova, I. V., Hennelly, S. P., Tung, C. S., and Sanbonmatsu, K. Y. (2013). Rise of the RNA machines: exploring the structure of long non-coding RNAs. J. Mol. Biol. 425, 3731-3746. doi: 10.1016/j.jmb.2013.02.030
-
(2013)
J. Mol. Biol.
, vol.425
, pp. 3731-3746
-
-
Novikova, I.V.1
Hennelly, S.P.2
Tung, C.S.3
Sanbonmatsu, K.Y.4
-
38
-
-
84882766445
-
A Prader-Willi locus lncRNA cloud modulates diurnal genes and energy expenditure
-
doi: 10.1093/hmg/ddt281 [Epub ahead of print]
-
Powell, W. T., Coulson, R. L., Crary, F. K., Wong, S. S., Ach, R. A., Tsang, P., et al. (2013). A Prader-Willi locus lncRNA cloud modulates diurnal genes and energy expenditure. Hum. Mol. Genet. doi: 10.1093/hmg/ddt281 [Epub ahead of print].
-
(2013)
Hum. Mol. Genet
-
-
Powell, W.T.1
Coulson, R.L.2
Crary, F.K.3
Wong, S.S.4
Ach, R.A.5
Tsang, P.6
-
39
-
-
34547499702
-
Dissecting the human BDNF locus: Bidirectional transcription, complex splicing, and multiple promoters
-
doi: 10.1016/j.ygeno.2007.05.004
-
Pruunsild, P., Kazantseva, A., Aid, T., Palm, K., and Timmusk, T. (2007). Dissecting the human BDNF locus: bidirectional transcription, complex splicing, and multiple promoters. Genomics 90, 397-406. doi: 10.1016/j.ygeno.2007.05.004
-
(2007)
Genomics
, vol.90
, pp. 397-406
-
-
Pruunsild, P.1
Kazantseva, A.2
Aid, T.3
Palm, K.4
Timmusk, T.5
-
40
-
-
84864126183
-
Emerging roles of non-coding RNAs in brain evolution, development, plasticity and disease
-
doi: 10.1038/nrn3234
-
Qureshi, I. A., and Mehler, M. F. (2012). Emerging roles of non-coding RNAs in brain evolution, development, plasticity and disease. Nat. Rev. Neurosci. 13, 528-541. doi: 10.1038/nrn3234
-
(2012)
Nat. Rev. Neurosci.
, vol.13
, pp. 528-541
-
-
Qureshi, I.A.1
Mehler, M.F.2
-
41
-
-
84861410998
-
Alternative splicing within the elk-1 5′ untranslated region serves to modulate initiation events downstream of the highly conserved upstream open reading frame 2
-
doi: 10.1128/MCB.06751-11
-
Rahim, G., Araud, T., Jaquier-Gubler, P., and Curran, J. (2012). Alternative splicing within the elk-1 5′ untranslated region serves to modulate initiation events downstream of the highly conserved upstream open reading frame 2. Mol. Cell. Biol.32, 1745-1756. doi: 10.1128/MCB.06751-11
-
(2012)
Mol. Cell. Biol.
, vol.32
, pp. 1745-1756
-
-
Rahim, G.1
Araud, T.2
Jaquier-Gubler, P.3
Curran, J.4
-
42
-
-
84877575447
-
Integration of genome-wide approaches identifies lncRNAs of adult neural stem cells and their progeny in vivo
-
doi: 10.1016/j.stem.2013.03.003
-
Ramos, A. D., Diaz, A., Nellore, A., Delgado, R. N., Park, K. Y., Gonzales-Roybal, G., et al. (2013). Integration of genome-wide approaches identifies lncRNAs of adult neural stem cells and their progeny in vivo. Cell Stem Cell 12, 616-628. doi: 10.1016/j.stem.2013.03.003
-
(2013)
Cell Stem Cell
, vol.12
, pp. 616-628
-
-
Ramos, A.D.1
Diaz, A.2
Nellore, A.3
Delgado, R.N.4
Park, K.Y.5
Gonzales-Roybal, G.6
-
43
-
-
84861904178
-
Genome regulation by long noncoding RNAs
-
doi: 10.1146/annurev-biochem-051410-092902
-
Rinn, J. L., and Chang, H. Y. (2012). Genome regulation by long noncoding RNAs. Annu. Rev. Biochem. 81, 145-166. doi: 10.1146/annurev-biochem-051410-092902
-
(2012)
Annu. Rev. Biochem.
, vol.81
, pp. 145-166
-
-
Rinn, J.L.1
Chang, H.Y.2
-
44
-
-
34250729138
-
Functional demarcation of active and silent chromatin domains in human HOX loci by noncoding RNAs
-
doi: 10.1016/j.cell.2007.05.022
-
Rinn, J. L., Kertesz, M., Wang, J. K., Squazzo, S. L., Xu, X., Brugmann, S. A., et al. (2007). Functional demarcation of active and silent chromatin domains in human HOX loci by noncoding RNAs. Cell 129, 1311-1323. doi: 10.1016/j.cell.2007.05.022
-
(2007)
Cell
, vol.129
, pp. 1311-1323
-
-
Rinn, J.L.1
Kertesz, M.2
Wang, J.K.3
Squazzo, S.L.4
Xu, X.5
Brugmann, S.A.6
-
45
-
-
44349191455
-
Prader-Willi phenotype caused by paternal deficiency for the HBII-85 C/D box small nucleolar RNA cluster
-
doi: 10.1038/ng.158
-
Sahoo, T., Del Gaudio, D., German, J. R., Shinawi, M., Peters, S. U., Person, R. E., et al. (2008). Prader-Willi phenotype caused by paternal deficiency for the HBII-85 C/D box small nucleolar RNA cluster. Nat. Genet. 40, 719-721. doi: 10.1038/ng.158
-
(2008)
Nat. Genet.
, vol.40
, pp. 719-721
-
-
Sahoo, T.1
Del Gaudio, D.2
German, J.R.3
Shinawi, M.4
Peters, S.U.5
Person, R.E.6
-
46
-
-
84861204166
-
Novel classes of non-coding RNAs and cancer
-
doi: 10.1186/1479-5876-10-103
-
Sana, J., Faltejskova, P., Svoboda, M., and Slaby, O. (2012). Novel classes of non-coding RNAs and cancer. J. Transl. Med. 10, 103. doi: 10.1186/1479-5876-10-103
-
(2012)
J. Transl. Med.
, vol.10
, pp. 103
-
-
Sana, J.1
Faltejskova, P.2
Svoboda, M.3
Slaby, O.4
-
47
-
-
84874529746
-
Imprinted Igf2r silencing depends on continuous Airn lncRNA expression and is not restricted to a developmental window
-
doi: 10.1242/dev.088849
-
Santoro, F., Mayer, D., Klement, R. M., Warczok, K. E., Stukalov, A., Barlow, D. P., et al. (2013). Imprinted Igf2r silencing depends on continuous Airn lncRNA expression and is not restricted to a developmental window. Development 140, 1184-1195. doi: 10.1242/dev.088849
-
(2013)
Development
, vol.140
, pp. 1184-1195
-
-
Santoro, F.1
Mayer, D.2
Klement, R.M.3
Warczok, K.E.4
Stukalov, A.5
Barlow, D.P.6
-
48
-
-
0022131865
-
On the origin of RNA splicing and introns
-
doi: 10.1016/0092-8674(85)90092-3
-
Sharp, P. A. (1985). On the origin of RNA splicing and introns. Cell 42, 397-400. doi: 10.1016/0092-8674(85)90092-3
-
(1985)
Cell
, vol.42
, pp. 397-400
-
-
Sharp, P.A.1
-
49
-
-
33747195353
-
Induction of pluripotent stem cells from mouse embryonic and adult fibroblast cultures by defined factors
-
doi: 10.1016/j.cell.2006.07.024
-
Takahashi, K., and Yamanaka, S. (2006). Induction of pluripotent stem cells from mouse embryonic and adult fibroblast cultures by defined factors. Cell 126, 663-676. doi: 10.1016/j.cell.2006.07.024
-
(2006)
Cell
, vol.126
, pp. 663-676
-
-
Takahashi, K.1
Yamanaka, S.2
-
50
-
-
84870918579
-
Disruption of a large intergenic noncoding RNA in subjects with neurodevelopmental disabilities
-
doi: 10.1016/j.ajhg.2012.10.016
-
Talkowski, M. E., Maussion, G., Crapper, L., Rosenfeld, J. A., Blumenthal, I., Hanscom, C., et al. (2012). Disruption of a large intergenic noncoding RNA in subjects with neurodevelopmental disabilities. Am. J. Hum. Genet. 91, 1128-1134. doi: 10.1016/j.ajhg.2012.10.016
-
(2012)
Am. J. Hum. Genet.
, vol.91
, pp. 1128-1134
-
-
Talkowski, M.E.1
Maussion, G.2
Crapper, L.3
Rosenfeld, J.A.4
Blumenthal, I.5
Hanscom, C.6
-
51
-
-
0032491416
-
Embryonic stem cell lines derived from human blastocysts
-
doi: 10.1126/science.282.5391.1145
-
Thomson, J. A., Itskovitz-Eldor, J., Shapiro, S. S., Waknitz, M. A., Swiergiel, J. J., Marshall, V. S., et al. (1998). Embryonic stem cell lines derived from human blastocysts. Science 282, 1145-1147. doi: 10.1126/science.282.5391.1145
-
(1998)
Science
, vol.282
, pp. 1145-1147
-
-
Thomson, J.A.1
Itskovitz-Eldor, J.2
Shapiro, S.S.3
Waknitz, M.A.4
Swiergiel, J.J.5
Marshall, V.S.6
-
52
-
-
84866388360
-
Transcription of two long noncoding RNAs mediates mating-type control of gametogenesis in budding yeast
-
doi: 10.1016/j.cell.2012.06.049
-
van Werven, F. J., Neuert, G., Hendrick, N., Lardenois, A., Buratowski, S., Van Oudenaarden, A., et al. (2012). Transcription of two long noncoding RNAs mediates mating-type control of gametogenesis in budding yeast. Cell 150, 1170-1181. doi: 10.1016/j.cell.2012.06.049
-
(2012)
Cell
, vol.150
, pp. 1170-1181
-
-
van Werven, F.J.1
Neuert, G.2
Hendrick, N.3
Lardenois, A.4
Buratowski, S.5
Van Oudenaarden, A.6
-
53
-
-
84874969813
-
Long non-coding RNA ANRIL (CDKN2B-AS) is induced by the ATM-E2F1 signaling pathway
-
doi: 10.1016/j.cellsig.2013.02.006
-
Wan, G., Mathur, R., Hu, X., Liu, Y., Zhang, X., Peng, G., et al. (2013). Long non-coding RNA ANRIL (CDKN2B-AS) is induced by the ATM-E2F1 signaling pathway. Cell. Signal. 25, 1086-1095. doi: 10.1016/j.cellsig.2013.02.006
-
(2013)
Cell. Signal.
, vol.25
, pp. 1086-1095
-
-
Wan, G.1
Mathur, R.2
Hu, X.3
Liu, Y.4
Zhang, X.5
Peng, G.6
-
54
-
-
80051989609
-
Understanding the transcriptome through RNA structure
-
doi: 10.1038/nrg3049
-
Wan, Y., Kertesz, M., Spitale, R. C., Segal, E., and Chang, H. Y. (2011). Understanding the transcriptome through RNA structure. Nat. Rev. Genet. 12, 641-655. doi: 10.1038/nrg3049
-
(2011)
Nat. Rev. Genet.
, vol.12
, pp. 641-655
-
-
Wan, Y.1
Kertesz, M.2
Spitale, R.C.3
Segal, E.4
Chang, H.Y.5
-
55
-
-
79953748673
-
A long noncoding RNA maintains active chromatin to coordinate homeotic gene expression
-
doi: 10.1038/nature09819
-
Wang, K. C., Yang, Y. W., Liu, B., Sanyal, A., Corces-Zimmerman, R., Chen, Y., et al. (2011). A long noncoding RNA maintains active chromatin to coordinate homeotic gene expression. Nature 472, 120-124. doi: 10.1038/nature09819
-
(2011)
Nature
, vol.472
, pp. 120-124
-
-
Wang, K.C.1
Yang, Y.W.2
Liu, B.3
Sanyal, A.4
Corces-Zimmerman, R.5
Chen, Y.6
-
56
-
-
84865379361
-
LincRNA-p21 suppresses target mRNA translation
-
doi: 10.1016/j.molcel.2012.06.027
-
Yoon, J. H., Abdelmohsen, K., Srikantan, S., Yang, X., Martindale, J. L., De, S., et al. (2012). LincRNA-p21 suppresses target mRNA translation. Mol. Cell 47, 648-655. doi: 10.1016/j.molcel.2012.06.027
-
(2012)
Mol. Cell
, vol.47
, pp. 648-655
-
-
Yoon, J.H.1
Abdelmohsen, K.2
Srikantan, S.3
Yang, X.4
Martindale, J.L.5
De, S.6
|