The Roles of Salicylic Acid and Jasmonic Acid in Plant Immunity

Molecular Plant Immunity

Volumn , Issue , 2012, Pages 55-79

  Kachroo, Pradeep ^a   Kachroo, Aardra ^a  

^a UNIVERSITY OF KENTUCKY   (United States)

Author keywords

JA biosynthetic mutants, microbial defense alteration; JA, in defense gene expression regulation; Jasmonate mediation in plant immunity, biotic abiotic stress regulator; SA biosynthesis, via the shikimic acid pathway; SA derivatives, SAG as major glucose conjugate of SA; SA signaling pathway, SA for basal and R protein mediated resistance; Salicylic and jasmonic acid role in plant immunity; SAR involving SA, altered gene expressions in cell wall strength ROS; Signaling in response to JA, by receptor protein complex F box; Transcription factors, JA derived signaling regulation

Indexed keywords

EID: 84886850837     PISSN: None     EISSN: None     Source Type: Book    
DOI: 10.1002/9781118481431.ch4     Document Type: Chapter

References (267)

1. Aarts, N., Metz, M., Holub, E., Staskawicz, B.J., Daniels, M.J., Parker, J.E. (1998). Different requirements for EDS1 and NDR1 by disease resistance genes define at least two R gene-mediated signaling pathways in Arabidopsis. Proc Natl Acad Sci U S A 95: 10306-11.
2. Aldridge, D.C., Galt, S., Giles, D., Turner, W.B. (1971). Metabolites of Lasiodiplodia theobromae. J Chem Soc C 1623-7.
3. Anderson, J.M. (1989). Membrane derived fatty acids as precursors to second messengers. In W.F. Boss, D.J. Morre, eds. Second Messengers in Plant Growth and Development. New York, A. R. Liss, pp. 181-212.
4. Anderson, J.P., Badruzsaufari, E., Schenk, P.M., Manners, J.M., Desmond, O.J., Ehlert, C., Maclean, D.J., Ebert, P.R., Kazan, K. (2004). Antagonistic interaction between abscisic acid and jasmonate-ethylene signaling pathways modulates defense gene expression and disease resistance in Arabidopsis. Plant Cell 16: 3460-79.
5. Attaran, E., Zeier, T.E., Griebel, T., Zeier, J. (2009). Methyl salicylate production and jasmonate signaling are not essential for systemic acquired resistance in Arabidopsis. Plant Cell 21: 954-71.
6. Aufsatz, W., Stoiber, T., Rakic, B., Naumann, K. (2007). Arabidopsis histone deacetylase 6: a green link to RNA silencing. Oncogene 26: 5477-88.
7. Bäckström, S., Elfving, N., Nilsson, R., Wingsle, G., Björklund, S. (2007). Purification of a plant Mediator from Arabidopsis thaliana identifies PFT1 as the Med25 subunit. Mol Cell 26: 717-29.
8. Bell, E., Creelman, R.A., Mullet, J.E. (1995). A chloroplast lipoxygenase is required for wound-induced accumulation of jasmonic acid in Arabidopsis. Proc Natl Acad Sci U S A 92: 8675-9.
9. Bellés, J.M., Garro, R., Fayos, J.,Navarro, P., Primo, J., Conejero,V. (1999). Gentisic acid as a pathogen-inducible signal, additional to salicylic acid for activation of plant defenses in tomato. Mol Plant Microbe Interact 12: 227-35.
10. Benedetti, C.E., Xie, D., Turner, J.G. (1995). COI1-dependent expression of an Arabidopsis vegetative storage protein in flowers and siliques and in response to coronatine or methyl jasmonate. Plant Physiol 109: 567-72.
11. Bhattacharjee, S., Halane, M.K., Kim, S.H., Gassmann, W. (2011). Pathogen effectors target Arabidopsis EDS1 and alter its interaction with immune regulators. Science 334: 1405-8.
12. Boller, T., Gehri, A., Mauch, F., Vogeli, U. (1983). Chitinase in bean leaves: induction by ethylene, purification, properties, and possible function Phaseolus vulgaris, antibiotic function, defense capacity of plant cells against pathogens. Planta 157: 22-31.
13. Boter, M., Ruíz-Rivero, O., Abdeen, A., Prat, S. (2004). ConservedMYCtranscription factors play a key role in jasmonate signaling both in tomato and Arabidopsis. Genes Dev 18: 1577-91.
14. Branch, C., Hwang, C.F., Navarre, D.A., Williamson, V.M. (2004). Salicylic acid is part of the Mi-1-mediated defense response to root-knot nematode in tomato. Mol Plant Microbe Interact 17: 351-6.
15. Brodersen, P., Petersen, M., Pike, H.M., Olszak, B., Skov, S., Odum, N., Jorgensen, L.B., Brown, R.E., Mundy, J. (2002). Knockout of Arabidopsis accelerated-cell-death11 encoding a sphingosine transfer protein causes activation of programmed cell death and defense. Genes Dev 16: 490-502.
16. Browse, J., Howe, G.A. (2008). New weapons and a rapid response against insect attack. Plant Physiol 146: 832-8.
17. Buttery, R.G., Ling, L.C. (1993). Volatiles of tomato fruit and plant parts: relationship and biogenesis. In Teranishi, R., Buttery, R., Sugisawa, H., eds. Bioactive Volatile Compounds From Plants. Washington, D.C., ACS Books, pp. 23-34.
18. Cao, H., Bowling, S.A., Gordon, S., Dong, X. (1994). Characterization of an Arabidopsis mutant that is nonresponsive to inducers of systemic acquired resistance. Plant Cell 6: 1583-92.
19. Cao, H., Glazebrook, J., Clark, J.D., Volko, S., Dong, X. (1997). The Arabidopsis NPR1 gene that controls systemic acquired resistance encodes a novel protein containing ankyrin repeats. Cell 88: 57-64.
20. Cao, H., Li, X., Dong, X. (1998). Generation of broad-spectrum disease resistance by overexpression of an essential regulatory gene in systemic acquired resistance. Proc Natl Acad Sci U S A 95: 6531-6.
21. Carr, J.P., Dixon, D.C., Nikolau, B.J., Voelkerding, K.V., Klessig, D.F. (1987). Synthesis and localization of pathogenesis-related proteins in tobacco. Mol Cell Biol 7: 1580-3.
22. Century, K.S., Holub, E.B., Staskawicz, B.J. (1995). NDR1, a locus of Arabidopsis thaliana that is required for disease resistance to both a bacterial and a fungal pathogen. Proc Natl Acad Sci U S A 92: 6597-601.
23. Century, K.S., Shapiro, A.D., Repetti, P.P.,Dahlbeck, D., Holub, E., Staskawicz, B.J. (1997). NDR1, a pathogen-induced component required for Arabidopsis disease resistance. Science 278: 1963-5.
24. Cerdán, P.D., Chory, J. (2003). Regulation of flowering time by light quality. Nature 423:881-5.
25. Chadha, K.C, Brown, S.A. (1974). Biosynthesis of phenolic acids in tomato plants infected with Agrobacterium tumefaciens. Can J Bot 52: 2041-7.
26. Chanda, B., Xia, Y., Mandal, M., Yu, K., Sekine, K., Gao, Q.-M., Selote, D., Hu, Y., Stromberg, A., Navarre, D., Kachroo, A., Kachroo, P. (2011). Glycerol-3-phosphate is a critical mobile inducer of systemic immunity in plants. Nat Genet 43: 421-7.
27. Chandra-Shekara, A.C., Navarre, D., Kachroo, A., Kang, H.G., Klessig, D., Kachroo, P. (2004). Signaling requirement and role of salicylic acid in HRT- and rrt-mediated resistance to turnip crinkle virus in Arabidopsis. Plant J 40: 647-59.
28. Chen, F., D'Auria, J.C., Tholl, D., Ross, J.R., Gershenzon, J., Noel, J.P., Pichersky, E. (2003). An Arabidopsis gene for methylsalicylate biosynthesis, identified by a biochemical genomics approach, has a role in defense. Plant J 36: 577-88.
29. Chen, Y.Y., Lin, Y.M., Chao, T.C., Wang, J.F., Liu, A.C., Ho, F.I., Cheng, C.P. (2009). Virus-induced gene silencing reveals the involvement of ethylene-, salicylic acid- and mitogen-activated protein kinase-related defense pathways in the resistance of tomato to bacterial wilt. Physiol Plant 136: 324-35.
30. Chen, Z., Silva, H., Klessig, D.F. (1993). Involvement of reactive oxygen species in the induction of systemic acquired resistance by salicylic acid in plants. Science 242: 883-6.
31. Cheng, Z., Sun, L., Qi, T., Zhang, B., Peng, W., Liu, Y., Xie, D. (2011). The bHLH transcription factor MYC3 interacts with the Jasmonate ZIM-domain proteins to mediate jasmonate response in Arabidopsis. Mol Plant 4: 279-88.
32. Chern, M., Fitzgerald, H.A., Canlas, P.E., Navarre, D.A., Ronald, P.C. (2005). Overexpression of a rice NPR1 homolog leads to constitutive activation of defense response and hypersensitivity to light. Mol Plant Microbe Interact 18: 511-20.
33. Chern, M.S., Fitzgerald, H.A., Yadav, R.C., Canlas, P.E., Dong, X., Ronald, P.C. (2001). Evidence for a disease-resistance pathway in rice similar to the NPR1-mediated signaling pathway in Arabidopsis. Plant J 27: 101-13.
34. Chini, A., Fonseca, S., Chico, J.M., Fernández-Calvo, P., Solano, R. (2009). The ZIM domain mediates homo- and heteromeric interactions between Arabidopsis JAZ proteins. Plant J 59: 77-87.
35. Chini, A., Fonseca, S., Fernandez, G., Adie, B., Chico, J.M., Lorenzo, O., Garcia-Casado, G., Lopez-Vidriero, I., Lozano, F.M., Ponce, M.R., Micol, J.L., Solano, R. (2007). The JAZ family of repressors is the missing link in jasmonate signalling. Nature 448: 666-71.
36. Cleland, C.F., Tanaka, O. (1979). Effect of day length on the ability of salicylic acid to induce flowering in the long-day Lema gibba G3 and the short-day plant Lemma paucicostata 6746. Plant Physiol 64: 421-4.
37. Cohen, Y., Gisi, U., Niderman, T. (1993). Local and systemic protection against Phytophthora infestans induced in potato and tomato plants by jasmonic acid and jasmonic acid methyl ester. Phytopathology 83: 1054-62.
38. Coppinger, P., Pepetti, P.P., Day, B., Dahlbeck, D., Mehlert, A., Staskawicz, B.J. (2004). Overexpression of the plasma membranelocalized NDR1 protein results in enhanced bacterial resistance in Arabidopsis thaliana. Plant J 40: 225-37.
39. Coquoz, J.L., Buchala, A., Métraux, J.-P. (1998). The biosynthesis of salicylic acid in potato plants. Plant Physiol 117: 1095-101.
40. Dean, J.V., Delaney, S.P. (2008). Metabolism of salicylic acid in wild-type, ugt74f1 and ugt74f2 glucosyltransferase mutants of Arabidopsis thaliana. Physiol Plant 132: 417-25.
41. Dean, J.V., Mohammed, L.A., Fitzpatrick, T. (2005). The formation, vacuolar localization and tonoplast transport of salicylic acid glucose conjugates in tobacco cell suspension cultures. Planta 221: 287-96.
42. Dean, J.V., Shah, R.P., Mohammed, L.A. (2003). Formation and vacuolar localization of salicylic acid glucose conjugates in soybean cell suspension cultures. Physiol Plant 118: 328-36.
43. Delaney, T.P., Friedrich, L., Ryals, J.A. (1995). Arabidopsis signal transduction mutant defective in chemically and biologically induced disease resistance. Proc Natl Acad Sci U S A 92: 6602-6.
44. Demetriou, K., Kapazoglou, A., Tondelli, A., Francia, E., Stanca, M.A., Bladenopoulos, K., Tsaftaris, A.S. (2009). Epigenetic chromatin modifiers in barley: I. cloning, mapping and expression analysis of the plant specific HD2 family of histone deacetylases from barley, during seed development and after hormonal treatment. Physiol Plant 136: 358-68.
45. Demianski, A.J., Chung, K.M., Kunkel, B.N. (2012). Analysis of Arabidopsis JAZ gene expression during Pseudomonas syringae pathogenesis. Mol Plant Pathol 13: 46-57.
46. Demole, E., Lederer, E., Mercier, D. (1962). Isolement et détermination de la structure du jasmonate de méthyle, constituant odorant caractéristique de l'essence de jasmin. Helv Chim Acta 45: 675-85.
47. Després, C., Chubak, C., Rochon, A, Clark, R., Bethune, T., Desveaux, D., Fobert, P.R. (2003). The Arabidopsis NPR1 disease resistance protein is a novel cofactor that confers redox regulation of DNA binding activity to the basic domain/leucine zipper transcription factor TGA1. Plant Cell 15: 2181-91.
48. Després, C., DeLong, C., Glaze, S., Liu, E., Fobert, P.R. (2000). The Arabidopsis NPR1/NIM1 protein enhances the DNA binding activity of a subgroup of the TGA family of bZIP transcription factors. Plant Cell 12: 279-90.
49. Desveaux, D., Subramaniam, R., Despres, C., Mess, J. N., Levesque, C., Fobert, P. R., Dangl, J. L. and Brisson, N. (2004). A "Whirly" transcription factor is required for salicylic acid-dependent disease resistance in Arabidopsis. Dev Cell 6: 229-40.
50. Devoto, A., Ellis, C., Magusin, A., Chang, H.-S., Chilcott, C., Zhu, T., Turner, J.G. (2005). Expression profiling reveals COI1 to be a key regulator of genes involved in wound- and methyl jasmonate-induced secondary metabolism, defence, and hormone interactions. Plant Mol Biol 58: 497-513.
51. Devoto, A., Nieto-Rostro, M., Xie, D., Ellis, C., Harmston, R., Patrick, E., Davis, J., Sherratt, L., Coleman, M. Turner, J.G. (2002). COI1 links jasmonate signalling and fertility to the SCF ubiquitin-ligase complex in Arabidopsis. Plant J 32: 457-66.
52. Devoto, A., Turner, J.G. (2003). Regulation of jasmonate-mediated plant responses in Arabidopsis. Ann Bot 92: 329-37.
53. Dixon, R.A., Paiva, N.L. (1995). Stress-induced phenylpropanoid metabolism. Plant Cell 7: 1085-97.
54. Doares, S.H., Narvaez-Vasquez, J., Conconi, A., Ryan, C.A. (1995). Salicylic acid inhibits synthesis of proteinase inhibitors in tomato leaves induced by systemin and jasmonic acid. Plant Physiol 108: 1741-6.
55. Dombrecht, B., Xue, G.P., Sprague, S.J., Kirkegaard, J.A., Ross, J.J., Reid, J.B., Fitt, G.P., Sewelam, N., Schenk, P.M., Manners, J.M., Kazan, K. (2007). MYC2 differentially modulates diverse jasmonate-dependent functions in Arabidopsis. Plant Cell 19: 2225-45.
56. Duijff, B.J., Pouhair, D., Olivain, C., Alabouvette, C., Lemanceau, P. (1998). Implication of systemic induced resistance in the suppression of fusarium wilt of tomato by Pseudomonas fluorescens WCS417r and by nonpathogenic Fusarium oxysporum Fo47. Eur J Plant Pathol 104: 903-10.
57. Durner, J., Klessig, D.F. (1995). Inhibition of ascorbate peroxidase by salicylic acid and 2.6-dichloroisonicdinic acid, two inducers of plant defense responses. Proc Natl Acad Sci U S A 92: 11312-6.
58. Durner, J., Wendehenne, D., Klessig, D. (1998). Defense gene induction in tobacco by nitric oxide, cyclic GMP, and cyclic ADP-ribose. Proc Natl Acad Sci U S A 95: 10328-33.
59. Durrant, W.E., Dong, X. (2004). Systemic acquired resistance. Annu Rev Phytopathol 42: 185-209.
60. Edwards, K., Cramer, C.L., Bolwell, G.P., Dixon, R.A., Schuch,W., Lamb, C.J. (1985). Rapid transient induction of phenylalanine ammonia-lyase mRNA in elicitor-treated bean cells. Proc Natl Acad Sci U S A 82: 6731-5.
61. Edwards, R. (1994). Conjugation and metabolism of salicylic acid in tobacco. J Plant Physiol 143: 609-14.
62. Effmert, U., Saschenbrecker, S., Ross, J., Negre, F., Fraser, C.M., Noel, J.P., Dudareva, N., Piechulla, B. (2005). Floral benzenoid carboxyl methyltransferases: from in vitro to in planta function. Phytochemistry 11: 1211-30.
63. Ellis, C., Turner, J.G. (2001). The Arabidopsis mutant cev1 has constitutively active jasmonate and ethylene signal pathways and enhanced resistance to pathogens. Plant Cell 13: 1025-33.
64. Enyedi, A.J., Yalpani, N., Silverman, P., Raskin, I. (1992). Localization, conjugation, and function of salicylic acid in tobacco during the hypersensitive reaction to tobacco mosaic virus. Proc Natl Acad Sci U S A 89: 2480-4.
65. Epple, P., Apel, K., Bohlmann, H. (1995). An Arabidopsis thaliana thionin gene is inducible via a signal transduction pathway different from that for pathogenesis-related proteins. Plant Physiol 109: 813-20.
66. Falk, A., Feys, B.J., Frost, L.N., Jones, J.D., Daniels, M.J., Parker, J.E. (1999). EDS1, an essential component of R gene-mediated disease resistance in Arabidopsis has homology to eukaryotic lipases. Proc Natl Acad Sci U S A 96: 3292-7.
67. Fan, W., Dong, X. (2002). In vivo interaction between NPR1 and transcription factor TGA2 leads to salicylic acid-mediated gene activation in Arabidopsis. Plant Cell 14: 1377-89.
68. Felton, G.W., Korth, K.L., Bi, J.L., Wesley, S.V., Huhman, D.V., Mathews, M.C., Murphy, J.B., Lamb, C., Dixon, R.A. (1999). Inverse relationship between systemic resistance of plants to microorganisms and to insect herbivory. Curr Biol 9: 317-20.
69. Fernández-Calvo, P., Chini, A., Fernández-Barbero, G., Chico, J.M., Gimenez-Ibanez, S., Geerinck, J., Eeckhout, D., Schweizer, F., Godoy, M., Franco-Zorrilla, J.M., Pauwels, L.,Witters, E., Puga, M.I., Paz-Ares, J., Goossens, A., Reymond, P., De Jaeger, G., Solano, R. (2011). The Arabidopsis bHLH transcription factors MYC3 and MYC4 are targets of JAZ repressors and act additively with MYC2 in the activation of jasmonate responses. Plant Cell 23: 701-15.
70. Ferrari, S., Plotnikova, J.M., De Lorenzo, G., Ausubel, F.M. (2003). Arabidopsis local resistance to Botrytis cinerea involves salicylic acid and camalexin and requires EDS4 and PAD2, but not SID2, EDS5 or PAD4. Plant J 35: 193-205.
71. Feys, B.J., Moisan, L.J., Newman, M.-A., Parker, J.E. (2001). Direct interaction between the Arabidopsis disease resistance signaling proteins, EDS1 and PAD4. Embo J 20: 5400-11.
72. Feys, B.J., Wiermer, M., Bhat, R.A., Moisan, L.J., Medina-Escobar, N., Neu, C., Cabral, A., Parker, J.E. (2005). Arabidopsis senescence-associated gene101 stablizes and signals within an enhanced disease susceptibility1 complex in plant innate immunity. Plant Cell 17: 2601-13.
73. Feys, B.J.F., Benedetti, C.E., Penfold, C.N., Turner, J.G. (1994). Arabidopsis mutants selected for resistance to the phytotoxin coronatine are male sterile, insensitive to methyl jasmonate, and resistant to a bacterial pathogen. Plant Cell 6: 751-9.
74. Fitzgerald, H.A., Chern, M.S., Navarre, R., Ronald, P.C. (2004). Overexpression of (At)NPR1 in rice leads to a BTH- and environment-induced lesion-mimic/cell death phenotype. Mol Plant Microbe Interact 17: 140-51.
75. Fong, P.M., Tian, L., Chen, Z.J. (2006). Arabidopsis thaliana histone deacetylase 1 (AtHD1) is localized in euchromatic regions and demonstrates histone deacetylase activity in vitro. Cell Res 16: 479-88.
76. Friedrich, L., Vernooij, E., Gaffney, T., Morse, A., Ryals, J. (1995). Characterization of tobacco plants expressing a bacterial salicylate hydroxylase gene. Plant Mol Biol 29: 959-68.
77. Fu, Z.Q., Yan, S., Saleh, A., Wang, W., Ruble, J., Oka, N., Mohan, R., Spoel, S.H., Tada, Y., Zheng, Y., Dong, X. (2012) NPR3 and NPR4 are receptors for the immune signal salicylic acid in plants. Nature 16: 228-32.
78. Gaffney, T., Friedrich, L., Vernooij, B., Negmtto, D., Nye, G., Uknes, S., Ward, E., Kessmann, H., Ryals, J. (1993). Requirement of salicylic acid for the induction of systemic acquired resistance. Science 261: 754-6.
79. García, A.V., Blanvillain-Baufumé, S., Huibers, R.P., Wiermer, M., Li, G., Gobbato, E., Rietz, S., Parker, J.E. (2010). Balanced nuclear and cytoplasmic activities of EDS1 are required for a complete plant innate immune response. PLoS Pathogens 6: e1000970.
80. Garcion, C., Lohmann, A., Lamodiere, E., Catinot, J., Buchala, A., Doermann, P., Metraux, J.-P. (2008). Characterization and biological function of the ISOCHORISMATE SYNTHASE2 gene of Arabidopsis. Plant Physiol 147: 1279-87.
81. Genoud, T., Buchala, A.J., Chua, N.H., Métraux, J.P. (2002). Phytochrome signalling modulates the SA-perceptive pathway in Arabidopsis. Plant J 31: 87-95.
82. Glazebrook, J., Ausubel, F.M. (1994). Isolation of phytoalexin- deficient mutants of Arabidopsis thaliana and characterization of their interactions with bacterial pathogens. Proc Natl Acad Sci U S A 91: 8955-9.
83. Glazebrook, J., Chen, W., Estes, B., Chang, H.S., Nawrath, C., Metraux, J.P., Zhu, T., Katagiri, F. (2003). Topology of the network integrating salicylate and jasmonate signal transduction derived from global expression phenotyping. Plant J 34: 217-28.
84. Glazebrook, J., Rogers, E.E., Ausubel, F.M. (1996). Isolation of Arabidopsis mutants with enhanced disease susceptibility by direct screening. Genetics 143: 973-82.
85. Griebel, T., Zeier, J. (2008). Light regulation and daytime dependency of inducible plant defenses in Arabidopsis: phytochrome signaling controls systemic acquired resistance rather than local defense. Plant Physiol 147: 790-801.
86. He, Y., Gan, S. (2002). A gene encoding an acyl hydrolase is involved in leaf senescence in Arabidopsis. Plant Cell 14: 805-15.
87. Heidrich, K., Wirthmueller, L., Tasset, C., Pouzet, C., Deslandes, L., Parker, J.E. (2011). Arabidopsis EDS1 connects pathogen effector recognition to cell compartment-specific immune responses. Science 334: 1401-4.
88. Heil, M., Koch, T., Hilpert, A., Fiala, B., Boland, W., Linsenmair, K.E. (2001). Extrafloral nectar production of the ant-associated plant, Macaranga tanarius, is an induced, indirect, defensive response elicited by jasmonic acid. Proc Natl Acad Sci U S A 98: 1083-8.
89. Heitz, T., Bergey, D.R., Ryan, C.A. (1997). A gene encoding a chloroplast-targeted lipoxygenase in tomato leaves is transiently induced by wounding, systemin, and methyl jasmonate. Plant Physiol 114:1085-93.
90. Hilpert, B., Bohlmann, H., den Camp, R., Przybyla, D., Miersch, O., Buchala, A., Apel, K. (2001). Isolation and characterization of signal transduction mutants of Arabidopsis thaliana that constitutively activate the octadecanoid pathway and form necrotic microlesions. Plant J 26: 435-46.
91. Horvath, D.M., Huang, D.J., Chua, N.H. (1998). Four classes of salicylate-induced tobacco genes. Mol Plant Microbe Interact 11: 895-905.
92. Howe, G.A., Jander, G. (2008). Plant immunity to insect herbivores. Annu Rev Plant Biol 59: 41-66.
93. Hu, G., deHart, A.K.A., Li, Y., Ustach, C., Handley, V., Navarre, R., Hwang, C.-F., Aegerter, B.J., Williamson, V.M., Baker, B. (2005). EDS1 in tomato is required for resistance mediated by TIR-class R genes and the receptor-like R gene Ve. Plant J 42: 376-91.
94. Huang, J., Gu, M., Lai, Z., Fan, B., Shi, K., Zhou, Y-H., Yu, J-Q., Chen, Z. (2010). Functional analysis of the Arabidopsis PAL gene family in plant growth, development and response to environmental stress. Plant Physiol 153: 1526-38.
95. Hyun, Y., Choi, S., Hwang, H.J., Yu, J., Nam, S.J., Ko, J., Park, J.Y., Seo, Y.S., Kim, E.Y., Ryu, S.B., Kim, W.T, Lee, Y., Kang, H., Lee, I. (2008). Cooperation and functional diversification of two closely related galactolipase genes for jasmonate biosynthesis. Dev Cell 14: 183-92.
96. Iavicoli, A., Boutet, E., Buchala, A., Métraux, J.P. (2003). Induced systemic resistance in Arabidopsis thaliana in response to root inoculation with Pseudomonas fluorescens CHA0. Mol Plant Microbe Interact 16: 851-858.
97. Ishiguro, S., Kawai-Oda, A., Ueda, J., Nishida, I., Okada, K. (2001). The defective in anther dehiscence1 gene encodes a novel phospholipase A1 catalyzing the initial step of jasmonic acid biosynthesis, which synchronizes pollen maturation, anther dehiscence, and flower opening in Arabidopsis. Plant Cell 13: 2191-209.
98. Ishihara, T., Sekine, K.-T., Hase, S., Kanayama, Y., Seo, S., Ohashi, Y., Kusano, T., Shibata, D., Shah, J., Takahashi, H. (2008). Overexpression of the Arabidopsis thaliana EDS5 gene enhances resistance to viruses. Plant Biol 10: 451-61.
99. Ito, T., Ng, K.H., Lim, T.S., Yu, H., Meyerowitz, E.M. (2007). The homeotic protein agamous controls late stamen development by regulating a jasmonate biosynthetic gene in Arabidopsis. Plant Cell 19: 3516-29.
100. James, D.J. (2003). Field evaluation of herbivore-induced plant volatiles as attractants for beneficial insects: methyl salicylate and the general lacewing, Chrysopa nigricornis. J Chem Ecol 29: 1601-9.
101. Jensen, A.B., Raventos, D., Mundy, J. (2002). Fusion genetic analysis of jasmonate-signalling mutants in Arabidopsis. Plant J 29: 595-606.
102. Jeong, R.-D., Chandra-Shekara, A.C., Barman, S., Navarre, D., Klessig, D., Kachroo, A., Kachroo, P. (2010). Cryptochrome 2 and phototropin 2 regulate resistance protein mediated viral defense by negatively regulating a E3 ubiquitin ligase. Proc Natl Acad Sci U S A 107: 13538-43.
103. Jirage, D., Tootle, T.L., Reuber, T.L., Frost, L.N., Feys, B.J., et al. (1999). Arabidopsis thaliana PAD4 encodes a lipase-like gene that is important for salicylic acid signaling. Proc Natl Acad Sci U S A 96: 13583-8.
104. Jung, H.W., Tschaplinkski, T.J., Wang, L., Glazebrook, J., Greenberg, J.T. (2009). Priming in systemic plant immunity. Science 324: 89-91.
105. Kachroo, A., Lapchyk, L., Fukushigae, H., Hildebrand, D., Klessig, D., Kachroo, P. (2003). Plastidial fatty acid signaling modulates salicylic acid- and jasmonic acid-mediated defense pathways in the Arabidopsis ssi2 mutant. Plant Cell 12: 2952-65.
106. Kachroo, A., Kachroo, P. (2007). Salicylic acid-, jasmonic acid- and ethylene-mediated regulation of plant defense signaling. In J. Setlow, ed. Genetic Engineering, Principles and Methods, Vol. 28. New York, Plenum Publishing Corporation, pp. 55-83.
107. Kachroo, A., Venugopal, S.C., Lapchyk, L., Falcone, D., Hildebrand, D., Kachroo, P. (2004). Oleic acid levels regulated by glycerolipid metabolism modulate defense gene expression in Arabidopsis. Proc Natl Acad Sci U S A 101: 5152-7.
108. Kachroo, P., Yoshioka, K., Shah, J., Dooner, H., Klessig, D.F. (2000). Resistance to turnip crinkle virus in Arabidopsis requires two host genes and is salicylic acid dependent but NPR1, ethylene and jasmonate independent. Plant Cell 12: 677-90.
109. Katsir, L., Schilmiller, A.L., Staswick, P.E., He, S.Y., Howe, G.A. (2008). COI1 is a critical component of a receptor for jasmonate and the bacterial virulence factor coronatine. Proc Natl Acad Sci U S A 105: 7100-5.
110. Kawano, T., Tanaka, S., Kadono, T., Muto, S. (2004). Salicylic acid glucoside acts as a slow inducer of oxidative burst in tobacco suspension culture. Z Naturforsch 59: 684-92.
111. Kazan, K., Manners, J.M. (2011). The interplay between light and jasmonate signaling during defence and development. J Exp Bot 62: 4087-100.
112. Kidd, B.N., Edgar, C.I., Kumar, K.K., Aitken, E.A., Schenk, P.M.,Manners, J.M., Kazan, K. (2009). The mediator complex subunit PFT1 is a key regulator of jasmonate-dependent defense in Arabidopsis. Plant Cell 21: 2237-52.
113. Kim, H.S., Delaney, T.P. (2002). Over-expression of TGA5, which encodes a bZIP transcription factor that interacts with NIM1/NPR1, confers SAR-independent resistance in Arabidopsis thaliana to Peronospora parasitica. Plant J 32: 151- 63.
114. Kim, Y.J., Bjorklund, S., Li, Y., Sayre, M.H., Kornberg, R.D. (1994). A multiprotein Mediator of transcriptional activation and its interaction with the C-terminal repeat domain of RNA polymerase II. Cell 4:599-608.
115. Klessig, D.F., Malamy, J. (1994). The salicylic acid signal in plants. Plant Mol Biol 26: 1439-58.
116. Kloepper, J.W., Ryu, C.-M., Zhang, S.A. (2004). Induced systemic resistance and promotion of plant growth by Bacillus spp. Phytopathology 94: 1259-66.
117. Koleske, A.J., Young, R.A. (1994). An RNA polymerase II holoenzyme responsive to activators. Nature 368: 466-9.
118. Koo, Y.J., Kim, M.A., Kim, E.H., Song, J.T. Jung, C., Moon, J.-K., Kim, J.-H., Seo, H.-S., Song, S.-I., Kim, J.-K., Lee, J.S., Cheong, J.-J., Choi, Y.D. (2007). Overexpression of salicylic acid carboxyl methyltransferase reduces salicylic acid-mediated pathogen resistance in Arabidopsis thaliana. Plant Mol Biol 64: 1-15.
119. Kramell, R., Atzorn, R., Schneider, G., Miersch, O., Brückner, C., Schmidt, J., Sembdner, G., Parthier, B. (1995). Occurrence and identification of jasmonic acid and its amino acid conjugates induced by osmotic stress in barley leaf tissue. J Plant Growth Regul 14: 29-36.
120. Kumar, D., Klessig, D.F. (2003). High-affinity salicylic acid-binding protein 2 is required for plant innate immunity and has salicylic acid stimulated lipase activity. Proc Natl Acad Sci U S A 100: 16101-6.
121. Kunkel, B.N., Brooks, D.M. (2002). Cross talk between signaling pathways. Curr Opin Plant Biol 5: 325-31.
122. Laudert, D., Weiler, E.W. (1998). Allene oxide synthase: a major control point in Arabidopsis thaliana octadecanoid signalling. Plant J 15: 675-84.
123. Lawton, K., Weymann, K., Friedrich, L., Vernooij, B., Uknes, S., Ryals, J. (1995). Systemic acquired resistance in Arabidopsis requires salicylic acid but not ethylene. Mol Plant Microbe Interact 8: 863-70.
124. Lawton, M.A., Dixon, R.A., Hahlbrock, K., Lamb, C.J. (1983). Rapid induction of the synthesis of phenylalanine ammonia-lyase and of chalcone synthase in elicitor-treated plant cells. Eur J Biochem 129: 593-601.
125. Le Henanff, G., Heitz, T., Mestre, P., Mutterer, J., Walter, B., Chong, J. (2009). Characterization of Vitis vinifera NPR1 homologs involved in the regulation of pathogenesis-related gene expression. BMC Plant Biol 9: 54.
126. Lee, H.-I., Raskin, I. (1998). Glucosylation of salicylic acid in Nicotiana tabacum cv. Xanthi-nc. Phytopathology 88: 692-7.
127. Lee, H.-I., Raskin, I. (1999). Purification, cloning, and expression of a pathogen inducible UDP-glucose:salicylic acid glucosyltransferase from tobacco. J Biol Chem 274: 36637-42.
128. Li, C.,Williams, M.M., Loh, Y.-T., Lee, I.G., Howe, G.A. (2002). Resistance of cultivated tomato to cell content-feeding herbivores is regulated by the octadecanoid-signaling pathway. Plant Physiol 130: 494-503.
129. Li, L., Zhao, Y., McCaig, B.C., Wingerd, B.A., Wang, J., Whalon, M.E., Pichersky, E., Howe, G.A. (2004). The tomato homolog of coronatine-insensitive1 is required for the maternal control of seed maturation, jasmonate-signaled defense responses, and glandular trichome development. Plant Cell 16:126-43.
130. Liang, X.W., Dron, M., Cramer, C.L., Dixon, R.A., Lamb, C.J. (1989). Differential regulation of phenylalanine ammonia-lyase genes during plant development and by environmental cues. J Biol Chem 264:14486-92.
131. Lindermayr, C., Sell, S., Müller, B., Leister, D., Durner, J. (2010). Redox regulation of the NPR1-TGA1 system of Arabidopsis thaliana by nitric oxide. Plant Cell 22: 2894-907.
132. Lipka, V., Dittgen, J., Bednarek, P., Bhat, R.,Wiermer, M., et al. (2005). Pre- and postinvasion defenses both contribute to nonhost resistance in Arabidopsis. Science 310: 1180-3.
133. Liu, G., Holub, E.B., Alonso, J.M., Ecker, J.R., Fobert, P.R. (2005). An Arabidopsis NPR1-like gene, NPR4, is required for disease resistance. Plant J 41: 304-18.
134. Liu, P.-P., Dahl, C.C., Klessig, D.F. (2011). The extent to which methyl salicylate is required for systemic acquired resistance is dependent on exposure to light after infection. Plant Physiol 157: 2216-26.
135. Liu, Y., Schiff, M., Marathe, R., Dinesh-Kumar, S.P. (2002). Tobacco Rar1, EDS1 and NPR1/NIM1 like genes are required for N-mediated resistance to tobacco mosaic virus. Plant J 30: 415-29.
136. Loon, L.C.V., Gerritsen, Y.A.M., Ritter, C.E. (1987). Identification, purification, and characterization of pathogenesis-related proteins from virus-infected Samsun NN tobacco leaves. Plant Mol Biol 9: 593-609.
137. Lorenzo, O., Chico, J.M., Sanchez-Serrano, J.J., Solano, R. (2004). JASMONATE-INSENSITIVE1 encodes a MYC transcription factor essential to discriminate between different jasmonate-regulated defense responses in Arabidopsis. Plant Cell 16: 1938-50.
138. Makandar, R., Essig, J.S., Schapaugh, M.A., Trick, H.N., Shah, J. (2006). Genetically engineered resistance to Fusarium head blight in wheat by expression of Arabidopsis NPR1. Mol Plant Microbe Interact 19: 123-9.
139. Maldonado, A.M., Doerner, P., Dixon, R.A., Lamb, C.J., Cameron, R.K. (2002). A putative lipid transfer protein involved in systemic resistance signaling in Arabidopsis. Nature 419: 399-403.
140. Malik, S., Roeder, R.G. (2005). Dynamic regulation of pol II transcription by the mammalian Mediator complex. Trends Biochem Sci 30: 256-63.
141. Malnoy, M., Jin, Q., Borejsza-Wysocka, E.E., He, S.Y., Aldwinckle, H.S. (2007). Overexpression of the apple MpNPR1 gene confers increased disease resistance in Malus x domestica. Mol Plant Microbe Interact 20: 1568-80.
142. Martinez, C., Pons, E., Prats, G., Léon, J. (2004). Salicylic acid regulates flowering time and links defence responses and reproductive development. Plant J 37: 209-17.
143. Mason, H.S., Mullet, J.E. (1990). Expression of two soybean vegetative storage protein genes during development and response to water deficit, wounding, and jasmonic acid. Plant Cell 2: 569-79.
144. Mateo, A., Muhlenbock, P., Rustérucci, C., Chang, C.C., Miszalski, Z., Karpinska, B., Parker, J.E., Mullineaux, P.M., Karpinski, S. (2004). Lesion simulating disease 1 is required for acclimation to conditions that promote excess excitation energy. Plant Physiol 136: 2818-30.
145. Mauch-Mani, B., Slusarenko, A.J. (1996). Production of salicylic acid precursors is a major function of phenylalanine ammonialyase in the resistance of Arabidopsis to Peronospora parasitica. Plant Cell 8: 203-12.
146. McConn, M., Browse, J. (1996). The critical requirement for linolenic acid is pollen development, not photosynthesis, in an Arabidopsis mutant. Plant Cell 8: 403-16.
147. Meeuse, B.J.D. (1966). The voodoo lily. Sci Am 215: 80-8.
148. Meeuse, B.J.D. (1975). Thermogenic respiration in aroids. Annu Rev Plant Physiol 26: 117-26.
149. Melotto, M.,Mecey, C., Niu, Y.J., Chung, H.S., Katsir, L., Yao, J.,Zeng,W.Q., Thines, B., Staswick, P., Browse, J., Howe, G.A., He, S.Y. (2008). A critical role of two positively charged amino acids in the Jas motif of Arabidopsis JAZ proteins in mediating coronatine- and jasmonoyl isoleucine-dependent interactions with the COI1 F-box protein. Plant J 55: 979-88.
150. Meuwly, P.,Molders,W., Buchala, A.,Métraux, J.P. (1995). Local and systemic biosynthesis of salicylic acid in infected cucumber plants. Plant Physiol 109: 1107-14.
151. Moeder, W., Pozo, O.D., Navarre, D.A., Martin, G.B., Klessig, D.F. (2007). Aconitase plays a role in regulating resistance to oxidative stress and cell death in Arabidopsis and Nicotiana benthamiana. Plant Mol Biol 63: 273-87.
152. Morris, K., Mackerness, S.A., Page, T., John, C.F., Murphy, A.M., Carr, J.P., Buchanan-Wollaston, V. (2000). Salicylic acid has a role in regulating gene expression during leaf senescence. Plant J 23: 677-85.
153. Mou, Z., Fan,W., Dong, X. (2003). Inducers of plant systemic acquired resistance regulate NPR1 function through redox changes. Cell 113: 935-44.
154. Mussig, C., Biesgen, C., Lisso, J., Uwer, U., Weiler, E.W., Altmann, T. (2000). A novel stress-inducible 12-oxophytodienoate reductase from Arabidopsis thaliana provides a potential link between brassino steroid-action and jasmonic-acid synthesis. J Plant Physiol 157: 143-52.
155. Navarre, D.A.,Wendehenne, D., Durner, J., Noad, R., Klessig, D.F. (2000). Nitric oxide modulates the activity of tobacco aconitase. Plant Physiol 122: 573-82.
156. Nawrath, C., Heck, S., Parinthawong, N.,Métraux, J.-P. (2002). EDS5, an essential component of salicylic acid-dependent signaling for disease resistance in Arabidopsis, is a member of the MATE transporter family. Plant Cell 14: 275-86.
157. Niggeweg, R., Thurow, C., Weigel, R., Pfitzner, U., Gatz, C. (2000). Tobacco TGA factors differ with respect to interaction with NPR1, activation potential and DNA-binding properties. Plant Mol Biol 42: 775-88.
158. Norman-Setterblad, C., Vidal, S., Palva, E.T. (2000). Interacting signal pathways control defense gene expression in Arabidopsis in response to cell wall-degrading enzymes from Erwinia carotovora. Mol Plant Microbe Interact 13: 430-8.
159. Ohlrogge, J., Browse, J. (1995). Lipid biosynthesis. Plant Cell 7: 957-70.
160. Pajerowska-Mukhtar, K., Stich, B., Achenbach, U., Ballvora, A., Lübeck, J., Strahwald, J., Tacke, E., Hofferbert, H.R., Ilarionova, E., Bellin, D.,Walkemeier, B., Basekow, R., Kersten, B., Gebhardt, C. (2009). Single nucleotide polymorphisms in the allene oxide synthase 2 gene are associated with field resistance to late blight in populations of tetraploid potato cultivars. Genetics 181: 1115-27.
161. Pajerowska-Mukhtar, K.M., Mukhtar, M.S., Guex, N., Halim, V.A., Rosahl, S., Somssich, I.E., Gebhardt, C. (2008). Natural variation of potato allene oxide synthase 2 causes differential levels of jasmonates and pathogen resistance in Arabidopsis. Planta 228: 293-306.
162. Pallas, J.A., Paiva, N.L., Lamb, C., Dixon, R.A. (1996). Tobacco plants epigenetically suppressed in phenylalanine ammonia-lyase expression do not develop systemic acquired resistance in response to infection by tobacco mosaic virus. Plant J 10: 281-93.
163. Park, C.J., Kim, K.J., Shin, R., Park, J.M., Shin, Y.C., Paek, K.H. (2004). Pathogenesis-related protein 10 isolated from hot pepper functions as a ribonuclease in an antiviral pathway. Plant J 37: 186-98.
164. Park, S.-W., Kaimoyo, E., Kumar, D., Mosher, S., Klessig, D.F. (2007). Methyl salicylate is a critical mobile signal for plant systemic acquired resistance. Science 318: 113-6.
165. Park, S.-W., Liu, P.-P., Forouhar, F., Vlot, A.C., Tong, L., Tietjen, K., Klessig, D. (2009). Use of a synthetic salicylic acid analog to investigate the roles of methyl salicylate and its esterases in plant disease resistance. J Biol Chem 284: 7307-17.
166. Parker, J.E., Holub, E.B., Frost, L.N., Falk, A., Gunn, N.D., Daniels, M.J. (1996). Characterization of eds1, a mutation in Arabidopsis suppressing resistance to Peronospora parasitica specified by several different RPP genes. Plant Cell 8: 2033-46.
167. Pauwels, L., Barbero, G.F., Geerinck, J., Tilleman, S., Grunewald, W., Pérez, A.C., Chico, J.M., Bossche, R.V., Sewell, J., Gil, E., García-Casado, G., Witters, E., Inzé, D., Long, J.A., De Jaeger, G., Solano, R., Goossens, A. (2010). NINJA connects the co-repressor TOPLESS to jasmonate signalling. Nature 464: 788-91.
168. Peleg-Grossman, S., Golani, Y., Kaye, Y.,Melamed-Book, N., Levine, A. (2009). NPR1 protein regulates pathogenic and symbiotic interactions between Rhizobium and legumes and non-legumes. PLoS ONE 4: e8399.
169. Penninckx, I.A.M.A., Eggermont, K., Terras, F.R.G., Thomma, B.P.H.J., De Samblanx, G.W., Buchala, A.,Métraux, J.-P., Manners, J.M., Broekaert,W.F. (1996). Pathogen-induced systemic activation of a plant defensin gene in Arabidopsis follows a salicylic acid-independent pathway. Plant Cell 8: 2309-23.
170. Persson, K., Schneider, G., Jordan, D.B., Viitanen, P.V., Sandalova, T. (1999). Crystal structure analysis of a pentameric fungal and an icosahedral plant lumazine synthase reveals the structural basis for differences in assembly. Protein Sci 8: 2355-65.
171. Pieterse, C.M.J., Van Wees, S.C.M., Van Pelt, J.A., Knoester, M., Laan, R., Gerrits, H., Weisbeek, P.J., Van Loon, L.C. (1998). A novel signaling pathway controlling induced systemic resistance in Arabidopsis. Plant Cell 10: 1571-80.
172. Pozo, M.J., Azcon-Aguilar, C. (2007). Unraveling mycorrhiza-induced resistance. Curr Opin Plant Biol 10: 393-8.
173. Radhika, V., Kost, C., Boland, W., Heil, M. (2010). The role of jasmonates in floral nectar secretion. PLoS ONE 5: e9265.
174. Raridan, G.J., Delaney, T.P. (2002). Role of salicylic acid and NIM1/NPR1 in race-specific resistance in Arabidopsis. Genetics 161: 803-11.
175. Raskin, I. (1992). Role of salicylic acid in plants. Annu Rev Plant Physiol Plant Mol Biol 43: 439-63.
176. Raskin, I., Ehmann, A., Melander, W.R., and Meeuse, B.J.D. (1987). Salicylic acid: a natural inducer of heat production in Arum lilies. Science 237: 1601-2.
177. Raskin, I., Turner, I.V., Melander,W.R. (1989). Regulation of heat production in the inflorescences of an Arum lily by endogenous salicylic acid. Proc Natl Acad Sci U S A 86: 2214-8.
178. Rasmussen, J.B., Hammerschmidt, R., Zook, M.N. (1991). Systemic induction of salicylic acid accumulation in cucumber after inoculation with Pseudomonas syringae pv syringae. Plant Physiol 97: 1342-7.
179. Robert-Seilaniantz, A., Grant, M., Jones, J.D.J. (2011). Hormone crosstalk in plant disease and defense: more than just jasmonatesalicylate antagonism. Ann Rev Phytopathol 49: 317-43.
180. Reymond, P., Farmer, E.E. (1998). Jasmonate and salicylate as global signals for defense gene expression. Curr Opin Plant Biol 1: 404-11.
181. Rhoads, D.M., McIntosh, L. (1992). Salicylic acid regulation of respiration in higher plants: alternative oxidase expression. Plant Cell 4: 1131-9.
182. Robson, F., Okamoto, H., Patrick, E., Harris, S.-R.,Wasternack, C., Brearley, C., Turner, J.G. (2010). Jasmonate and phytochrome A signaling in Arabidopsis wound and shade responses are integrated through JAZ1 stability. Plant Cell 22: 1143-60.
183. Roden, L.C., Ingle, R.A. (2009). Light, rhythms, infection: the role of light and the circadian clock in determining the outcome of plant-pathogen interactions. Plant Cell 21: 2546-52.
184. Rogers, E.E., Ausubel, F.M. (1997). Arabidopsis enhanced disease susceptibility mutants exhibit enhanced susceptibility to several bacterial pathogens and alterations in PR-1 gene expression. Plant Cell 9: 305-16.
185. Rohde, A., Morreel, K., Ralph, J., Goeminne, G., Hostyn,V., Rycke, R.D.,Kushnir, S., Doorsselaere, J.V., Joseleau, J.-P.,Vuylsteke, M., Driessche, G.V., Beeuman, J.V., Messens, E., Boerjan, W. (2004). Molecular phenotyping of the pal1 and pal2 mutants of Arabidopsis thaliana reveals far-reaching consequences on phenylpropanoid, amino acid and carbohydrate metabolism. Plant Cell 16: 2749-71.
186. Ross, A.F. (1961). Systemic acquired resistance induced by localized virus infections in plants. Virology 14: 340-58.
187. Rossi, M., Goggin, F.L., Milligan, S.B., Kaloshian, I., Ullman, D.E., Williamson, V.M. (1998). The nematode resistance gene Mi of tomato confers resistance against the potato aphid. Proc Natl Acad Sci U S A 95: 9750-4.
188. Rueffer, M., Steipe, B., Zenk, M.H. (1995). Evidence against specific binding of salicylic acid to plant catalase. FEBS Lett 377: 175-80.
189. Rustérucci, C., Aviv, D.H., Holt, B.F., Dangl, J.L., Parker, J.E. (2001). The disease resistance signaling components EDS1 and PAD4 are essential regulators of the cell death pathway controlled by LSD1 in Arabidopsis. Plant Cell 13: 2211-24.
190. Ryals, J., Weymann, K., Lawton, K., Friedrich, L., Ellis, D., Steiner, H.-Y., Johnson, J., Delaney, T.P., Jesse, T., Vos, P., Uknes, S. (1997). The Arabidopsis NIM1 protein shows homology to the mammalian transcription factor inhibitor IkB. Plant Cell 9: 425-39.
191. Ryals, J.A., Neuenschwander, U.H., Willits, M.G., Molina, A., Steiner, H.-Y., Hunt, M.D. (1996). Systemic acquired resistance. Plant Cell 8: 1809-19.
192. Sanders, P.M., Lee, P.Y., Biesgen, C., Boone, J.D., Beals, T.P., Weiler, E.W., Goldberg, R.B. (2000). The Arabidopsis delayed dehiscence1 gene encodes an enzyme in the jasmonic acid synthesis pathway. Plant Cell 12: 1041-62.
193. Schenk, P. M., Kazan, K., Wilson, I., Anderson, J. P., Richmond, T., Somerville, S. C., Manners, J. M. (2000). Coordinated plant defense responses in Arabidopsis revealed by microarray analysis. Proc Natl Acad Sci U S A 97: 11655-60.
194. Schiestl, F.P., Roubik, D.W. (2003). Odor compound detection in male euglossine bees. J Chem Ecol 29: 253-7.
195. Schommer, C., Palatnik, J.F., Aggarwal, P, Chételat, A., Cubas, P., Farmer, E.E., Nath, U., Weigel, D., Carrington, J.C. (2008). Control of jasmonate biosynthesis and senescence by miR319 targets. PLoS Biol 6: e230.
196. Shah, J. (2003). The salicylic acid loop in plant defense. Curr Opin Plant Biol 6: 365-71.
197. Shah, J. (2009). Plant under attack: systemic signaling in defense. Curr Opin Plant Biol 12: 459-64.
198. Shah, J., Tsui, F., Klessig, D.F. (1997). Characterization of a salicylic acid-insensitive mutant (sai1) of Arabidopsis thaliana identified in a selective screen utilizing the SA-inducible expression of the tms2 gene. Mol Plant Microbe Interact 10: 69-78.
199. Shapiro, A.D., Zhang, C. (2001). The role of NDR1 in avirulence gene-directed signaling and control of programmed cell death in Arabidopsis. Plant Physiol 127: 1089-101.
200. Sheard, L.B., Tan, X., Mao, H., Wither, J., Ben-Nissan, G., Hinds, T.R., Kobayashi, Y., Hsu, F.-F., Sharon, M., Brose, J., He, S.Y., Rizo, J., Howe, G.A., Zheng, N. (2010). Jasmonate perception by inositol-phosphate-potentiated COI1-JAZ co-receptor. Nature 468: 400-5.
201. Shi, Z., Maximova, S.N., Liu, Y., Verica, J., Guilinan, M.J. (2010). Functional analysis of the Theobroma cacao NPR1 gene in Arabidopsis. BMC Plant Biol 10: 248.
202. Shulaev, V., Léon, J., Raskin, I. (1995). Is salicylic acid a translocated signal of systemic acquired resistance in tobacco? Plant Cell 7: 1691-701.
203. Shulaev, V., Silverman, P., Raskin, I. (1997). Airborne signaling by methyl salicylate in plant pathogen resistance. Nature 385, 718-21.
204. Silverman, P., Seskar, M.,Kanter, D., Schweizer, P.,Métraux, J.P., Raskin, I. (1995). Salicylic acid in rice: biosynthesis, conjugation, and possible role. Plant Physiol 108: 633-9.
205. Slaymaker, D.H., Navarre, D.A., Clark, D., Pozo, O.D., Martin, G.B., Klessig, D.F. (2002). The tobacco salicylic acid-binding protein 3 (SABP3) is the chloroplast carbonic anhydrase, which exhibits antioxidant activity and plays a role in the hypersensitive defense response. Proc Natl Acad Sci U S A 99: 11640-5.
206. Smith-Becker, J., Marois, E., Huguet, E.J., Midland, S.L., Sims, J.J., Keen, N.T. (1998). Accumulation of salicylic acid and 4-hydroxybenzoic acid in phloem of cucumber during systemic acquired resistance is preceded by a transient increase in phenylalanine ammonia-lyase activity in petioles and stems. Plant Physiol 116: 231-8.
207. Song, J.T., Koo, Y.J., Seo, H.K., Kim, M.C., Choi, Y.D., Kim, J.H. (2008). Overexpression of AtSGT1, an Arabidopsis salicylic acid glucosyltransferase, leads to increased susceptibility to Pseudomonas syringae. Phytochemistry 69: 1128-34.
208. Spoel, S.H., Dong, X. (2008). Making sense of hormone cross talk during plant immune response. Cell Host Microbe 3: 348-51.
209. Spoel, S.H., Koornneef, A., Claessens, S.M., Korzelius, J.P., Van Pelt, J.A., Mueller, M.J., Buchala, A.J., Metraux, J.P., Brown, R., Kazan, K., Van Loon, L.C., Dong, X., Pieterse, C.M. (2003). NPR1 modulates cross-talk between salicylate- and jasmonatedependent defense pathways through a novel function in the cytosol. Plant Cell 15: 760-70.
210. Spoel, S.H., Mou, Z., Tada, Y., Spivey, N.W., Genschik, P., Dong, X. (2009). Proteasome-mediated turnover of the transcription coactivator NPR1 plays dual roles in regulating plant immunity. Cell 137: 860-72.
211. Staswick, P.E. (2008). JAZing up jasmonate signaling. Trends Plant Sci 13: 66-71.
212. Staswick, P.E., Tiryaki, I. (2004). The oxylipin signal jasmonic acid is activated by an enzyme that conjugates it to isoleucine in Arabidopsis. Plant Cell 16: 2117-27.
213. Staswick, P.E., Tiryaki, I., Rowe, M.L. (2002). Jasmonate response locus JAR1 and several related Arabidopsis genes encode enzymes of the firefly luciferase superfamily that show activity on jasmonic, salicylic, and indole-3-acetic acids in an assay for adenylation. Plant Cell 14: 1405-15.
214. Strawn, M.A., Marr, S.K., Inoue, K., Inada, N., Zubieta, C., Wildermuth, M.C. (2007). Arabidopsis isochorismate synthase functional in pathogen-induced salicylate biosynthesis exhibits properties consistent with a role in diverse stress responses. J Biol Chem 282: 5919-33.
215. Tada, Y., Spoel, S.H., Pajerowska-Muhktar, K., Mou, Z., Song, J., Wang, C., Zuo, J., Dong, X. (2008). Plant immunity requires conformational changes of NPR1 via S-nitrosylation and thoredoxins. Science 321: 952-6.
216. Takahashi, H., Miller, J., Nozaki, Y., Takeda, M., Shah, J., Hase, S., Ikegami, M., Ehara, Y., Dinesh-Kumar, S.P. (2002). RCY1, an Arabidopsis thaliana RPP8/HRT family resistance gene, conferring resistance to cucumber mosaic virus requires salicylic acid, ethylene and a novel signal transduction mechanism. Plant J 32: 655-67.
217. Thaler, J.S., Owen, B., Higgins, V.J. (2004). The role of the jasmonate response in plant susceptibility to diverse pathogens with a range of lifestyles. Plant Physiol 135: 530-8.
218. Thines, B., Katsir, L., Melotto, M., Niu, Y., Mandaokar, A., Liu, G., Nomura, K., He, S.Y., Howe, G.A., Browse, J. (2007). JAZ repressor proteins are targets of the SCF (COI1) complex during jasmonate signalling. Nature 448: 661-5.
219. Thomma, B., Eggermont, K., Penninckx, I., Mauch-Mani, B., Vogelsang, R., Cammue, B.P.A., Broekaert, W.F. (1998). Separate jasmonate-dependent and salicylate-dependent defense-response pathways in Arabidopsis are essential for resistance to distinct microbial pathogens. Proc Natl Acad Sci U S A 95: 15107-11.
220. Tieman, D., Zeigler, M.L., Schmelz, E., Taylor, M.G., Rushing, S., Jones, J.B., Klee, H.J. (2010). Functional analysis of a tomato salicylic acid methyl transferase and its role in synthesis of the flavor volatile methyl salicylate. Plant J 62: 113-23.
221. Toledo-Ortiz, G., Huq, E., Quail, P.H. (2003). The Arabidopsis basic/helix-loop-helix transcription factor family. Plant Cell 15: 1749-70.
222. Truman, W., Bennett, M.H., Kubigsteltig, I., Turnbull, C., Grant, M. (2007). Arabidopsis systemic immunity uses conserved signaling pathways and is mediated by jasmonates. Proc Natl Acad Sci U S A 104: 1075-80.
223. Tzin, V., Galili, G. (2010). The biosynthetic pathways for shikimate and aromatic amino acids in Arabidopsis thaliana. The Arabidopsis Book 8: e0132.
224. Vanacker, H., Lu, H., Rate, D.N., Greenberg, J.T. (2001).Arole for salicylic acid and NPR1 in regulating cell growth in Arabidopsis. Plant J 28: 209-16.
225. van der Biezen, E.A., Freddie, C.T., Kahn, K., Parker, J.E., Jones, J.D.G. (2002). Arabidopsis RPP4 is a member of the RPP5 multigene family of TIR-NB-LRR genes and confers downy mildew resistance through multiple signalling components. Plant J 29: 439-51.
226. van Loon, L.C., Bakker, P.A.H.M. (2006). Root-associated bacteria inducing systemic resistance. In S.S. Gnanamanickam, ed. Plant-Associated Bacteria. Dordrecht, Springer, pp. 269-316.
227. van Loon, L.C., Bakker, P.A.H.M., Pieterse, C.M.J. (1998). Systemic resistance induced by rhizosphere bacteria. Annu Rev Phytopathol 36: 453-83.
228. van Loon, L.C., Rep, M., Pieterse, C.M. (2006). Significance of inducible defense-related proteins in infected plants. Annu Rev Phytopathol 44: 135-62.
229. van Wees, S.C.M., De Swart, E.A.M., Van Pelt, J.A., Van Loon, L.C., Pieterse, C.M.J. (2000). Enhancement of induced disease resistance by simultaneous activation of salicylate- and jasmonate-dependent defense pathways in Arabidopsis thaliana. Proc Natl Acad Sci U S A 97: 8711-6.
230. Venugopal, S.C., Jeong, R.-D., Mandal, M., Zhu, S., Chandra-Shekara, A.C., Xia, Y., Hersh, M., Stromberg, A.J., Navarre, D., Kachroo, A., Kachroo, P. (2009). Enhanced disease susceptibility 1 and salicylic acid act redundantly to regulate resistance gene expression and low oleate-induced defense signaling. PLOS Genet 5: e1000545.
231. Verberne, M.C., Sansuk, K., Bol, J.F., Linthorst, H.J.M., Verpoorte, R. (2007). Vitamin K1 accumulation in tobacco plants overexpressing bacterial genes involved in the biosynthesis of salicylic acid. J Biotechnol 128: 72-9.
232. Verhagen, B.W., Glazebrook, J., Zhu, T., Chang, H.S., van Loon, L.C., Pieterse, C.M. (2004). The transcriptome of rhizobacteriainduced systemic resistance in Arabidopsis. Mol Plant Microbe Interact 17: 895-908.
233. Vernooij, B., Friedrich, L., Morse, A., Reist, R., Kolditz-Jawhar, R.,Ward, E., Uknes, S., Kessmann, H., Ryals, J. (1994). Salicylic acid is not the translocated signal responsible for inducing systemic acquired resistance but is required in signal transduction. Plant Cell 6: 959-65.
234. Vick, B.A., Zimmerman, D.C. (1983). The biosynthesis of jasmonic acid: a physiological role for plant lipoxygenase. Biochem Biophys Res Commun 111: 470-7.
235. Vignutelli, A., Wasternack, C., Apel, K., Bohlmann, H. (1998). Systemic and local induction of an Arabidopsis thionin gene by wounding and pathogens. Plant J 14: 285-95.
236. Vijayan, P., Shockey, J., Lévesque, C.A, Cook, R.J., Browse, J. (1998). A role for jasmonate in pathogen defense of Arabidopsis. Proc Natl Acad Sci U S A 95: 7209-14.
237. Vinale, F., Sivasithamparam, K., Ghisalberti, E.L., Marra, R., Woo, S.L., Lorito, M. (2008). Trichoderma-plant-pathogen interactions. Soil Biol Biochem 40: 1-10.
238. Vlot, A.C., Liu, P.-P., Cameron, R.K., Park, S.W., Yang, Y., Kumar, D., Zhou, F., Padukkavidana, T., Gustafsson, C., Pichersky, E., Klessig, D.F. (2008). Identification of likely orthologs of tobacco salicylic acid binding protein 2 and their role in systemic resistance in Arabidopsis thaliana. Plant J 56: 445-56.
239. Wada, K.C., Yamada, M., Shiraya, T., Takeno, K. (2010). Salicylic acid and the flowering gene FLOWERING LOCUS T homolog are involved in poor-nutrition stress-induced flowering of Pharbitis nil. J Plant Physiol 167: 447-52.
240. Wang, D., Amornsiripanitch, N., Dong, X. (2006). A genomic approach to identify regulatory nodes in the transcriptional network of systemic acquired resistance in plants. PLoS Pathogens 2: e123.
241. Wang, Y.Q., Feechan, A., Yun, B.W., Shafiei, R., Hofmann, A., Taylor, P., Xue, P., Yang, F.Q., Xie, Z.S., Pallas, J.A., Chu, C.C., Loake, G.J. (2009). S-nitrosylation of AtSABP3 antagonizes the expression of plant immunity. J Biol Chem 284: 2131-7.
242. Ward, E.R., Uknes, S.J., Williams, S.C., Dincher, S.S., Wiederhold, D.L., Alexander, D.C., Ahl-Goy, P., Metraux, J.P., Ryals, J.A. (1991). Coordinate gene activity in response to agents that induce systemic acquired resistance. Plant Cell 3: 1085-94.
243. Wasternack, C. (2007). Jasmonates: an update on biosynthesis, signal transduction and action in plant stress response, growth and development. Ann Bot 100: 681-97.
244. Wildermuth, M.C., Dewdney, J., Wu, G., Ausubel, F.M. (2001). Isochorismate synthase is required to synthesize salicylic acid for plant defense. Nature 414: 562-71.
245. Wu, K., Zhang, L., Zhou, C., Yu, C.W., Chaikam, V. (2008). HDA6 is required for jasmonate response, senescence and flowering in Arabidopsis. J Exp Bot 59: 225-34.
246. Xia, Y., Gao, Q.-M., Navarre, D., Hildebrand, D., Kachroo, A., Kachroo, P. (2009). An intact cuticle in distal tissues is essential for the induction of systemic acquired resistance in plants. Cell Host Microbe 5: 151-65.
247. Xia, Y., Yu, K., Navarre, D., Seebold, K., Kachroo, A., Kachroo, P. (2010). The glabra1 mutation affects cuticle formation and plant responses to microbes. Plant Physiol 154: 833-46.
248. Xiao, S., Dai, L., Liu, F., Wang, Z., Peng, W., Xie, D. (2004). COS1: an Arabidopsis coronatine insensitive1 suppressor essential for regulation of jasmonate-mediated plant defense and senescence. Plant Cell 16: 1132-42.
249. Xie, D.X., Feys, B.F., James, S., Nieto-Rostro, M., Turner, J.G. (1998). COI1: an Arabidopsis gene required for jasmonate-regulated defense and fertility. Science 280: 1091-4.
250. Xu, L., Liu, F., Lechner, E., Genschik, P., Crosby,W.L., Ma, H., Peng,W., Huang, D., Xie, D. (2002). The SCFCOI1 ubiquitin-ligase complexes are required for jasmonate response in Arabidopsis. Plant Cell 14: 1919-35.
251. Xu, L., Liu, F., Wang, Z., Peng, W., Huang, R., Huang, D., Xie, D. (2001). An Arabidopsis mutant cex1 exhibits constant accumulation of jasmonate-regulated AtVSP, Thi2.1 and PDF1.2. FEBS Lett 494: 161-4.
252. Xu, C., Fan, J., Riekhof,W., Froehlich, J.E., Benning, C. (2003). A permease-like protein involved in ER to thylakoid lipid transfer in Arabidopsis. Embo J 22: 2370-9.
253. Yalpani, N., Altier, D.J., Barbour, E., Cigan, A.L., Scelonge, C.J. (2001). Production of 6-methylsalicylic acid by expression of a fungal polyketide synthase activates disease resistance in tobacco. Plant Cell 13: 1401-9.
254. Yalpani, N., Leon, J., Lawton, M.A., Raskin, I. (1993). Pathway of salicylic acid biosynthesis in healthy and virus-inoculated tobacco. Plant Physiol 103: 315-21.
255. Yalpani, N., Silverman, P., Wilson, T.M., Kleier, D.A., Raskin, I. (1991). Salicylic acid is a systemic signal and an inducer of pathogenesis-related proteins in virus-infected tobacco. Plant Cell 3: 809-18.
256. Yan, J., Zhang, C., Gu, M., Bai, Z., Zhang, W., Qi, T., Cheng, Z., Peng, W., Luo, H., Nan, F., Wang, Z., Xie, D. (2009). The Arabidopsis CORONATINE INSENSITIVE1 protein is a jasmonate receptor. Plant Cell 21: 2220-36.
257. Yan, Y.X., Stolz, S., Chetelat, A., Reymond, P., Pagni, M., Dubugnon, L., Farmer, E.E. (2007). A downstream mediator in the growth repression limb of the jasmonate pathway. Plant Cell 19: 2470-83.
258. Yuan, Y., Zhong, S., Li, Q., Zhu, Z., Lou, Y., Wang, L., Wang, J., Wang, M., Yang, D., He, Z. (2007). Functional analysis of rice NPR1-like genes reveals that OsNPR1/ NH1 is the rice orthologue conferring disease resistance with enhanced herbivore susceptibility. Plant Biotechnol J 5: 313-24.
259. Yun, D.J., Zhao, Y., Pardo, J.M., Narasimhan, M.L., Damsz, B., Lee, H., Abad, L.R., D'Urzo, M.P., Hasegawa, P.M., Bressan, R.A. (1997). Stress proteins on the yeast cell surface determine resistance to osmotin, a plant antifungal protein. Proc Natl Acad Sci U S A 94: 7082-7.
260. Zeigler, M.L. (2007). Role of methyl salicylate in tomato flavor and response to bacterial pathogen infection. Ph.D. thesis, University of Florida.
261. Zhang, Y., Cheng, Y.T., Qu, N., Zhao, Q., Bi, D., Li, X. (2006). Negative regulation of defense response in Arabidopsis by two NPR1 paralogs. Plant J 48: 647-56.
262. Zhang, Y., Fan, W., Kinkema, M., Li, X., Dong, X. (1999). Interaction of NPR1 with basic leucine zipper protein transcription factors that bind sequences required for salicylic acid induction of the PR-1 gene. Proc Natl Acad Sci U S A 96: 6523-8.
263. Zhang, Y., Tessaro, M.J., Lassner, M., Li, X. (2003). Knockout analysis of Arabidopsis transcription factors TGA2, TGA5, and TGA6 reveals their redundant and essential roles in systemic acquired resistance. Plant Cell 15: 2647-53.
264. Zhou, C., Zhang, L., Duan, J., Miki, B., Wu, K. (2005). Histone deacetylase19 is involved in jasmonic acid and ethylene signaling of pathogen response in Arabidopsis. Plant Cell 17: 1196-204.
265. Zhou, J.-M., Trifa, Y., Silva, H., Pontier, D., Lam, E., Shah, J., Klessig, D.F. (2000). NPR1 differentially interacts with members of the TGA/OBF family of transcription factors that bind an element of the PR-1 gene required for induction by salicylic acid. Mol Plant Microbe Interact 13: 191-202.
266. Zhou, N., Tootle, T.L., Tsui, F., Klessig, D.F., Glazebrook, J. (1998). PAD4 functions upstream from salicylic acid to control defense responses in Arabidopsis. Plant Cell 10: 1021-30.
267. Zhu, S., Jeong, R.-D., Venugopal, S.C., Lapchyk, L., Navarre, D., Kachroo, A., Kachroo, P. (2011). SAG101 forms a ternary complex with EDS1 and is required for resistance signaling against Turnip Crinkle Virus. PLoS Pathogens 7: e1002318.