A downstream mediator in the growth repression limb of the jasmonate pathway

Plant Cell

Volumn 19, Issue 8, 2007, Pages 2470-2483

  Yan, Yuanxin ^a,c   Stolz, Stéphanie ^a   Chételat, Aurore ^a   Reymond, Philippe ^a   Pagni, Marco ^b   Dubugnon, Lucie ^a   Farmer, Edward E ^a  

^a UNIVERSITY OF LAUSANNE   (Switzerland)

^b SWISS INSTITUTE OF BIOINFORMATICS   (Switzerland)

^c TEXAS A AND M UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

BIOASSAY; GENES; GROWTH KINETICS; TISSUE; TRANSCRIPTION;

GROWTH REPRESSION; JASMONIC ACID (JA); PLANT TISSUES; TRANSIENT EXPRESSION ASSAYS;

PLANTS (BOTANY);

ARABIDOPSIS; ARABIDOPSIS THALIANA;

EID: 35348890918     PISSN: 10404651     EISSN: 1532298X     Source Type: Journal    
DOI: 10.1105/tpc.107.050708     Document Type: Article

References (45)

1. Abramoff, M.D., Magelhaes, P.J., and Ram, S.J. (2004). Image processing with ImageJ. Biophotonics Int. 11: 36-42.
2. Achard, P., Cheng, H., De Grawe, L., Decat, J., Schoutteten, H., Moritz, T., Van Der Straeten, D., Peng, J., and Harberd, N.P. (2006). Integration of plant responses to environmentally activated phytohormonal signals. Science 311: 91-94.
3. Bonaventure, G., Gfeller, A., Proebsting, W.M., Hoerstensteiner, S., Chételat, A., Martinoia, E., and Farmer, E.E. (2007). A gain of function allele of TPC1 activates oxylipin biogenesis after leaf wounding in Arabidopsis. Plant J. 49: 889-898.
4. Browse, J. (2005). Jasmonate: An oxylipin signal with many roles in plants. Vitam. Horm. 72: 431-456.
5. Caldelari, D., and Farmer, E.E. (1998). Rapid assays for the coupled cell free generation of oxylipins. Phytochemistry 47: 599-604.
6. Cipollini, D. (2005). Interactive effects of lateral shading and jasmonic acid on morphology, physiology, seed production, and defense traits in Arabidopsis thaliana. Int. J. Plant Sci. 166: 955-959.
7. Curtis, M., and Grossniklaus, U. (2003). A Gateway TM cloning vector set for high-throughput functional analysis of genes in plants. Plant Physiol. 133: 462-469.
8. Dathe, W., Roensch, H., Preiss, A., Schade, W., Sembdner, G., and Schreiber, K. (1981). Endogenous plant hormones of the broad bean, Vicia faba L. (-)-jasmonic acid, a plant growth inhibitor in pericarp. Planta 153: 530-535.
9. Devoto, A., Nieto-Rostro, M., Xie, D., Ellis, C., Harmston, R., Patrick, E., Davis, J., Sherratt, L., Coleman, M., and Turner, J.G. (2002). COI1 links jasmonate signalling and fertility to the SCF ubiquitin-ligase complex in Arabidopsis. Plant J. 32: 457-466.
10. Devoto, A., and Turner, J.G. (2003). Regulation of jasmonate-mediated plant responses in Arabidopsis. Ann. Bot. (Lond.) 92: 329-337.
11. Feys, B.J.F., Beneditti, C.E., Penfold, C.N., and Turner, J.G. (1994). Arabidopsis mutants selected for resistance to the phytotoxin coronatine are male sterile, insensitive to methyl jasmonate, and resistant to a bacterial pathogen. Plant Cell 6: 751-775.
12. Finn, R.D., et al. (2006). Pfam: Clans, web tools and services. Nucleic Acids Res. 34: D247-D251.
13. Hilson, P., et al. (2004). Versatile gene-specific sequence tags for Arabidopsis functional genomics: Transcript profiling and reverse genetics applications. Genome Res. 14: 2176-2189.
14. Ko, J.-H., Kim, J.H., Jayanty, S.S., Howe, G.A., and Han, K.-H. (2006). Loss of function of COBRA, a determinant of oriented cell expansion, invokes cellular defence responses in Arabidopsis thaliana. J. Exp. Bot. 57: 2923-2936.
15. Laudert, D., and Weiler, E.W. (1998). Allene oxide synthase: A major control point in Arabidopsis thaliana octadecanoid signaling. Plant J. 15: 675-684.
16. Li, L., Zhao, Y., McCaig, B.C., Wingerd, B.A., Wang, J., Whalon, M.E., Pickersky, E., and Howe, G.A. (2004). The tomato homolog of CORONATINE-INSENSITIVE1 is required for the maternal control of seed maturation, jasmonate-signaled defense responses, and glandular trichome development. Plant Cell 16: 126-143.
17. Lorenzo, O., and Solano, R. (2005). Molecular players regulating the jasmonate signalling network. Curr. Opin. Plant Biol. 8: 532-540.
18. Mandaokar, A., Thines, B., Shin, B., Lange, B.M., Choi, G., Koo, Y.J., Yoo, Y.J., Choi, Y.D., and Browse, J. (2006). Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling. Plant J. 46: 984-1008.
19. Michel, K., Abderhalden, O., Bruggmann, R., and Dudler, R. (2006). Transcriptional changes in powdery mildew infected wheat and Arabidopsis leaves undergoing syringolin-triggered hypersensitive cell death at infection sites. Plant Mol. Biol. 62: 561-578.
20. Mueller, L.A., Hinz, U., Uzé, M., Sautter, C., and Zryd, J.-P. (1997). Biochemical complementation of the betalain biosynthetic pathway in Portulaca grandiflora by a fungal 3,4-dihydroxyphenylalanine dioxygenase. Planta 203: 260-263.
21. Mueller, M.J., Mene-Saffrane, L., Grun, C., Karg, K., and Farmer, E.E. (2006). Oxylipin analysis methods. Plant J. 45: 472-489.
22. Orozco-Cardenas, M.L., Narvaez-Vasquez, J., and Ryan, C.A. (2001). Hydrogen peroxide acts as a second messenger for the induction of defense genes in tomato plants in response to wounding, systemin, and methyl jasmonate. Plant Cell 13: 179-191.
23. Pagni, M., Ioannidis, V., Cerutti, L., Zahn-Zabal, M., Jonbgeneel, C.V., and Falquet, L. (2004). MyHits: A new interactive resource for protein annotation and domain identification. Nucleic Acids Res. 32: W332-W335.
24. Park, J.-H., Halitschke, R., Kim, B.H., Baldwin, I.T., Feldmann, K.A., and Feyereisen, R. (2002). A knock-out mutation in allene oxide synthase results in male sterility and defective wound signal transduction in Arabidopsis due to a block in jasmonic acid biosynthesis. Plant J. 31: 1-12.
25. Reymond, P., Weber, H., Damond, M., and Farmer, E.E. (2000). Differential gene expression in response to mechanical wounding and insect feeding in Arabidopsis. Plant Cell 12: 707-719.
26. Ryan, C.A., Pearce, G.A., Scheer, J., and Moura, D.S. (2002). Polypeptide hormones. Plant Cell 14 (suppl.): S251-S264.
27. Saniewski, M. (1988). The effect of methyl jasmonate and benzyladenine of epiphyllous bud formation in Bryophyllum diagremontianum. Bull. Acad. Pol. Sci. Biol. 36: 39-44.
28. Sasaki, Y., et al. (2001). Monitoring of methyl jasmonate-responsive genes in Arabidopsis by cDNA macroarray: Self-activation of jasmonic acid biosynthesis and crosstalk with other phytohormone signaling pathways. DNA Res. 8: 153-161.
29. Spoel, S.H., et al. (2003). NPR1 modulates cross-talk between salicylate- and jasmonate-dependent defense pathways through a novel function in the cytosol. Plant Cell 15: 760-770.
30. Staswick, P.E., Su, W., and Howell, S.H. (1992). Methyl jasmonate inhibition of root growth and induction of a leaf protein are decreased in an Arabidopsis thaliana mutant. Proc. Natl. Acad. Sci. USA 89: 6837-6840.
31. Staswick, P.E., and Tiryaki, I. (2004). The oxylipin signal jasmonic acid is activated by an enzyme that conjugates it to isoleucine in Arabidopsis. Plant Cell 16: 2117-2127.
32. Storey, J.D., and Tibshirani, R. (2003). Statistical significance for genome-wide studies. Proc. Natl. Acad. Sci. USA 100: 9440-9445.
33. Świa̧tek, A., Azmi, A., Stals, H., Inze, D., and Van Onckelen, H. (2004). Jasmonic acid prevents the accumulation of cyclin B1;1 and CDK-B in synchronized tobacco BY-2 cells. FEBS Lett. 572: 118-122.
34. Świa̧tek, A., Lenjou, M., Van Bockstaele, D., Inze, D., and Van Onckelen, H. (2002). Differential effect of jasmonic acid and abscisic acid on cell cycle progression in tobacco BY-2 cells. Plant Physiol. 128: 201-211.
35. Ueda, J., and Kato, J. (1982). Inhibition of cytokinin-induced plant growth by jasmonic acid and its methyl ester. Physiol. Plant. 54: 473-497.
36. Vandesompele, J., De Preter, K., Pattyn, F., Poppe, B., Van Roy, N., De Paepe, A., and Speleman, F. (2002). Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes. Genome Biol. 3: RESEARCH0034.
37. Vanholme, B., Grunewald, W., Bateman, A., Kohchi, T., and Gheysen, G. (2007). The tify family previously known as ZIM. Trends Plant Sci. 12: 239-244.
38. Weigel, D., and Glazebrook, J. (2002). Arabidopsis: A Laboratory Manual. (Cold Spring Harbor, NY: Cold Spring Harbor Laboratory Press).
39. White, D.R. (2006). PEAPOD regulates lamina size and curvature in Arabidopsis. Proc. Natl. Acad. Sci. USA 103: 13238-13243.
40. Xie, D.-X., Feys, B.F., James, S., Nieto-Rostro, M., and Turner, J.G. (1998). COI1: An Arabidopsis gene required for jasmonate regulated defense and fertility. Science 280: 1091-1094.
41. Xu, L., Liu, F., Lechner, E., Genschik, P., Crosby, W.L., Ma, H., Peng, W., Huang, D., and Xie, D. (2002). The SCFCOI1 ubiquitin-ligase complexes are required for jasmonate response in Arabidopsis. Plant Cell 14: 1919-1935.
42. Yamane, H., Sugawara, J., Susuki, Y., Shimamura, E., and Takahashi, N. (1980). Syntheses of jasmonic acid related compounds and their structure-activity relationship on the growth of rice seedlings. Agric. Biol. Chem. 44: 2857-2864.
43. Zavala, J.A., and Baldwin, I.T. (2006). Jasmonic acid signalling and herbivore resistance traits constrain regrowth after herbivore attack in Nicotiana attenuata. Plant Cell Environ. 29: 1751-1760.
44. Zhu, J.-K. (2001). Plant salt tolerance. Trends Plant Sci. 6: 66-71.
45. Zimmermann, P., Hirsch-Hoffmann, M., Hennig, L., and Gruissem, W. (2004). GENEVESTIGATOR. Arabidopsis microarray database and analysis toolbox. Plant Physiol. 136: 2621-2632.