The arabidopsis NIM1 protein shows homology to the mammalian transcription factor inhibitor IκB

Plant Cell

Volumn 9, Issue 3, 1997, Pages 425-439

  Ryals, John ^a   Weymann, Kris ^a   Lawton, Kay ^a   Friedrich, Leslie ^a   Ellis, Daniel ^a   Steiner, Henry York ^a   Johnson, Jay ^a   Delaney, Terrence P ^a,c   Jesse, Taco ^b   Vos, Pieter ^b   Uknes, Scott ^a  

^a NOVARTIS PHARMA AG   (Switzerland)

^b KEYGENE N V   (Netherlands)

^c Department of Obstetrics Gynecology   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ARABIDOPSIS;

EID: 0031106159     PISSN: 10404651     EISSN: None     Source Type: Journal    
DOI: 10.1105/tpc.9.3.425     Document Type: Article

References (66)

1. Altschul, S.F., Gish, W., Miller, W., Myers, E.W., and Lipman, D.J. (1990). Basic local alignment search tool. J. Mol. Biol. 215, 403-410.
2. Ausubel, F.M., Brent, R., Kingston, R.E., Moore, D.D., Seidman, J.G., Smith, J.A., and Struhl, K., eds (1987). Current Protocols in Molecular Biology. (New York: John Wiley and Sons).
3. Baeuerle, P., and Baltimore, D. (1996). NF-κB: Ten years after. Cell 87, 13-20.
4. Baldwin, A. (1996). The NF-κB and IκB proteins: New discoveries and insights. Annu. Rev. Immunol. 14, 649-681.
5. Bechtold, N., Ellis, J., and Pelletier, G. (1993). In planta Agrobacterium mediated gene transfer by infiltration of adult Arabidopsis thaliana plants. C. R. Acad. Sci. Ser. III Sci. Vie 316, 494-499.
6. Beg, A., and Baltimore, D. (1996). An essential role for NF-κB in preventing TNF-α-induced cell death. Science 274, 782-784.
7. Bell, C., and Ecker, J. (1994). Assignment of 30 microsatellite loci to the linkage map of Arabidopsis. Genomics 19, 137-144.
8. Bent, A. (1996). Plant disease resistance genes: Function meets structure. Plant Cell 8, 1757-1771.
9. Bhat, K. (1993). Generation of a plasmid vector for deletion cloning by rapid multiple site-directed mutagenesis. Gene 134, 83-87.
10. Bi, Y.M., Kenton, P., Mur, L., Darby, R., and Draper, J. (1995). Hydrogen peroxide does not function downstream of salicylic acid in the induction of PR protein expression. Plant J. 8, 235-245.
11. Bowling, S.A., Guo, A., Cao, H., Gordon, A.S., Klessig, D.F., and Dong, X. (1994). A mutation in Arabidopsis that leads to constitutive expression of systemic acquired resistance. Plant Cell 6, 1845-1857.
12. Cameron, R.K., Dixon, R.A., and Lamb, C.J. (1994). Biologically induced systemic acquired resistance in Arabidopsis thaliana. Plant J. 5, 715-725.
13. Cao, H., Bowling, S.A., Gordon, A.S., and Dong, X. (1994). Characterization of an Arabidopsis mutant that is nonresponsive to inducers of systemic acquired resistance. Plant Cell 6, 1583-1592.
14. Century, K.S., Holub, E.B., and Staskawicz, B.J. (1995). NDR1, a locus of Arabidopsis thaliana that is required for disease resistance to both a bacterial and a fungal pathogen. Proc. Natl. Acad. Sci. USA 92, 6597-6601.
15. Choi, S., Creelman, R.A., Mullet, J.E., and Wing, R.A. (1995). Construction and characterization of a bacterial artificial chromosome library of Arabidopsis thaliana. Weeds World 2(i), 17-20.
16. Creusot, F., Fouilloux, E., Dron, M., Lafleuriel, J., Picard, G., Billaut, A., Le Paslier, D., Cohen, D., Chaboute, M.-E., Durr, A., Fleck, J., Gigot, C., Camilleri, C., Bellini, C., Caboche, M., and Bouchez, D. (1995). The CIC library: A large insert YAC library for genome mapping in Arabidopsis thaliana. Plant J. 8, 763-770.
17. Dayhoff, M.O., Schwartz, R.M., and Orcutt, B.C. (1979). A model of evolutionary change in proteins. Matrices for detecting distant relationships. In Atlas of Protein Sequence and Structure, Vol. 5, Suppl. 3, M.O. Dayhoff, ed (Washington, DC: National Biomedical Research Foundation), pp. 345-352.
18. Delaney, T.P. (1997). Genetic dissection of acquired resistance to disease. Plant Physiol. 113, 5-12.
19. Delaney, T.P., Uknes, S., Vernooij, B., Friedrich, L., Weymann, K., Negrotto, D., Gaffney, T., Gut-Rella, M., Kessmann, H., Ward, E., and Ryals, J. (1994). A central role of salicylic acid in plant disease resistance. Science 266, 1247-1250.
20. Delaney, T.P., Friedrich, L., and Ryals, J.A. (1995). Arabidopsis signal transduction mutant defective in chemically and biologically induced disease resistance. Proc. Natl. Acad. Sci. USA 92, 6602-6606.
21. de Martin, R., Vanhove, B., Cheng, Q., Hofer, E., Csizmadia, V., Winkler, H., and Bach, F.H. (1993). Cytokine-inducible expression in endothelial cells of an I kappa B alpha-like gene is regulated by NF kappa B. EMBO J. 12, 2773-2779.
22. de Martin, R., Holzmuller, H., Hofer, E., and Bach, F.H. (1995). Intron-exon structure of the porcine I kappa B alpha-encoding gene. Gene 152, 253-255.
23. Dempsey, D.A., and Klessig, D.F. (1995). Signals in plant disease resistance. Bull. Inst. Pasteur 93, 167-186.
24. Dietrich, R.A., Delaney, T.P., Uknes, S.J., Ward, E.R., Ryals, J.A., and Dangl, J.L. (1994). Arabidopsis mutants simulating disease resistance response. Cell 77, 565-577.
25. Elledge, S., Mulligan, J., Ramer, S., Spottswood, M., and Davis, R. (1991). λ Yes: A multifunctional cDNA expression vector for the isolation of genes by complementation of yeast and Escherichia coli mutations. Proc. Natl. Acad. Sci. USA 88, 1731-1735.
26. Gaffney, T., Friedrich, L., Vernooij, B., Negrotto, D., Nye, G., Uknes, S., Ward, E., Kessmann, H., and Ryals, J. (1993). Requirement of salicylic acid for the induction of systemic acquired resistance. Science 261, 754-756.
27. Glazebrook, J., Rogers, E.E., and Ausubel, F.M. (1996). Isolation of Arabidopsis mutants with enhanced disease susceptibility by direct screening. Genetics 143, 973-982.
28. Greenberg, J.T., Guo, A.L., Klessig, D.F., and Ausubel, F.M. (1994). Programmed cell death in plants - A pathogen-triggered response activated coordinately with multiple defense functions. Cell 77, 551-563.
29. Gribskov, M., and Burgess, R.R. (1986). Sigma factors from E. coli, B. subtilis, phage SP01, and phage T4 are homologous proteins. Nucleic Acids Res. 14, 6745-6763.
30. Hebsgaard, S., Korning, P., Tolstrup, J., Engelbrecht, J., Rouze, P., and Brunak, S. (1996). Splice site prediction in Arabidopsis thaliana pre-mRNA by combining local and global sequence information. Nucleic Acids Res. 24, 3439-3452.
31. Higgins, D.G., and Sharp, P.M. (1989). Fast and sensitive multiple sequence alignments on a microcomputer. Comput. Appl. Biosci. 5, 151-153.
32. Hunt, M., and Ryals, J. (1996). Systemic acquired resistance signal transduction. Crit. Rev. Plant Sci. 15, 583-606.
33. Ip, Y., Reach, M., Engstrom, Y., Kadalayil, L., Cai, H., Gonzalez-Crespo, S., Tatei, K., and Levine, M. (1993). Dif, a dorsal-related gene that mediates an immune response in Drosophila. Cell 75, 753-763.
34. Kopp, E., and Ghosh, S. (1994). Inhibition of NF-κB by sodium salicylate and aspirin. Science 265, 956-959.
35. Lagrimini, L.M., Burkhart, W., Moyer, M., and Rothstein, S. (1987). Molecular cloning of complementary DNA encoding the lignin-forming peroxidase from tobacco: Molecular analysis and tissue-specific expression. Proc. Natl. Acad. Sci. USA84, 7542-7546.
36. Lawrence, G.J., Finnegan, E.J., Ayliffe, M.A., and ElliS, J.G. (1995). The L6 gene for flax rust resistance is related to the Arabidopsis bacterial resistance gene RPS2 and the tobacco viral resistance gene W. Plant Cell 7, 1195-1206.
37. Lawton, K., Uknes, S., Friedrich, L., Gaffney, T., Alexander, D., Goodman, R., Métraux, J.-P., Kessmann, H., Ahl-Goy, P., Gut-Rella, M., Ward, E., and Ryals, J. (1993). The molecular biology of systemic aquired resistance. In Mechanisms of Defence Responses in Plants, B. Fritig and M. Legrand, eds (Dordrecht, The Netherlands: Kluwer Academic Publishers), pp. 422-432.
38. Lawton, K.A., Friedrich, L., Hunt, M., Weymann, K., Delaney, T., Kessmann, H., Staub, T., and Ryals, J. (1996). Benzothiadiazole induces disease resistance in Arabidopsis by activation of the systemic acquired resistance signal transduction pathway. Plant J. 10, 71-82.
39. Lemaitre, B., Nicolas, E., Michaut, L., Reichhart, J.-M., and Hoffmann, J. (1996). The dorsoventral regulatory gene cassete spatzle/Toll/cactus controls the potent antifungal response in Drosophila adults. Cell 86, 973-983.
40. Lister, C., and Dean, C. (1993). Recombinant inbred lines for mapping RFLP and phenotypic markers in Arabidopsis thaliana. Plant J. 4, 745-750.
41. Liu, Y.-G., Mitsukawa, N., Vazquez-Tello, A., and Whittier, R. (1995). Generation of a high-quality P1 library of Arabidopsis suitable for chromosome walking. Plant J. 7, 351-358.
42. Maher, E.A., Bate, N.J., Ni, W.T., Elkind, Y., Dixon, R.A., and Lamb, C.J. (1994). Increased disease susceptibility of transgenic tobacco plants with suppressed levels of preformed phenylpropanoid products. Proc. Natl. Acad. Sci. USA 91, 7802-7806.
43. Mauch-Mani, B., and Slusarenko, A.J. (1994). Systemic acquired resistance in Arabidopsis thaliana induced by a predisposing infection with a pathogenic isolate of Fusarium oxysporum. Mol. Plant-Microbe Interact. 7, 378-383.
44. Mauch-Mani, B., and Slusarenko, A.J. (1996). Production of salicylic acid precursors is a major function of phenylalanine ammonia-lyase in the resistance of Arabidopsis to Peronospora parasitica. Plant Cell 8, 203-212.
45. Michaely, P., and Bennett, V. (1992). The ANK repeat: A ubiquitous motif involved in macromolecular recognition. Trends Cell Biol. 2, 127-129.
46. Mindrinos, M., Katagiri, F., Yu, G.L., and Ausubel, F. (1994). The Arabidopsis thaliana disease resistance gene rps2 encodes a protein containing a nucleotide-binding site and leucine-rich repeats. Cell 78, 1089-1099.
47. Pallas, J., Paiva, N., Lamb, C., and Dixon, R. (1996). Tobacco plants epigenetically suppressed in phenylalanine ammonia-lyase expression do not develop systemic acquired resistance in response to infection by tobacco mosaic virus. Plant J. 10, 281-293.
48. Parker, J.E., Holub, E.B., Frost, L.N., Falk, A., Gunn, N.D., and Daniels, M.J. (1996). Characterization of eds1, a mutation in Arabidopsis suppressing resistance to Peronospora parasitica specified by several different RPP genes. Plant Cell 8, 2033-2046.
49. Patton, D.A., Franzmann, L.H., and Meinke, D.W. (1991). Mapping genes essential for embryo development in Arabidopsis thaliana. Mol. Gen. Genet. 227, 337-347.
50. Rogers, J.C., and Milliman, C. (1984). Coordinate increase in major transcripts from the high pl α-amylase multigene family in barley aleurone cells stimulated with gibberellic acid. J. Biol. Chem. 259, 12234-12240.
51. Ryals, J.A., Neuenschwander, U.H., Willits, M.G., Molina, A., Steiner, H.-Y., and Hunt, M.D. (1996). Systemic acquired resistance. Plant Cell 8, 1809-1819.
52. Sambrook, J., Fritsch, E.F., and Maniatis, T. (1989). Molecular Cloning: A Laboratory Manual. (Cold Spring Harbor, NY: Cold Spring Harbor Laboratory).
53. Schwartz, R.M., and Dayhoff, M.O. (1979). A model of evolutionary change in proteins. In Atlas of Protein Sequence and Structure, M.O. Dayhoff, ed (Washington, DC: National Biomedical Research Foundation), pp. 353-358.
54. Shulaev, V., Léon, J., and Raskin, I. (1995). Is salicylic acid a trans-located signal of systemic acquired resistance in tobacco? Plant Cell 7, 1691-1701.
55. Sun, S., Elwood, J., and Greene, W.C. (1996). Both amino- and carboxyl-terminal sequences within IκBα regulate its inducible degradation. Mol. Cell. Biol. 16, 1058-1065.
56. Tewari, M., Mohn, K.L., Yue, F.E., and Taub, R. (1992). Sequence of rat RL/IF-1 encoding an IκB, and comparison with related proteins containing notch-like repeats [corrected]. Nucleic Acids Res. 20, 607.
57. Uknes, S., Mauch-Mani, B., Moyer, M., Potter, S., Williams, S., Dincher, S., Chandler, D., Slusarenko, A., Ward, E., and Ryals, J. (1992). Acquired resistance in Arabidopsis. Plant Cell 4, 645-656.
58. Uknes, S., Winter, A.M., Delaney, T., Vernooij, B., Morse, A., Friedrich, L., Nye, G., Potter, S., Ward, E., and Ryals, J. (1993). Biological induction of systemic acquired resistance in Arabidopsis. Mol. Plant-Microbe Interact. 6, 692-698.
59. Van Antwerp, D., Martin, S., Kafri, T., Green, D., and Verma, I. (1996). Suppression of TNF-α-induced apoptosis by NF-κB. Science 274, 787-789.
60. Vernooij, B., Friedrich, L., Morse, A., Reist, R., Kolditz-Jawhar, R., Ward, E., Uknes, S., Kessmann, H., and Ryals, J. (1994). Salicylic acid is not the translocated signal responsible for inducing systemic acquired resistance but is required in signal reduction. Plant Cell 6, 959-965.
61. Vernooij, B., Friedrich, L., Goy, P.A., Staub, T., Kessmann, H., and Ryals, J. (1995). 2,6-Dichloroisonicotinic acid-induced resistance to pathogens without the accumulation of salicylic acid. Mol. Plant-Microbe Interact. 8, 228-234.
62. Verwoerd, B., Dekker, M., and Hoekema, A. (1989). A small-scale procedure for the rapid isolation of plant RNAs. Nucleic Acids Res. 17, 2362.
63. Vos, P., Hogers, R., Bleeker, M., Reijans, M., van de Lee, T., Homes, M., Frijters, A., Pot, J., Pelema, J., Kuiper, M., and Zabeau, M. (1995). AFLP: A new technique for DMA fingerprinting. Nucleic Acids Res. 23, 4407-4414.
64. Wang, C.-Y., Mayo, M., and Baldwin, A. (1996). TNF- and cancer therapy-induced apoptosis: Potentiation by inhibition of NF-κB. Science 274, 784-787.
65. Weymann, K., Hunt, M., Uknes, S., Neuenschwander, U., Lawton, K., Steiner, H.-Y., and Ryals, J. (1995). Suppression and restoration of lesion formation in Arabidopsis Ied mutants. Plant Cell 7, 2013-2022.
66. Whitham, S., Dinesh-Kumar, S.P., Choi, D., Hehl, R., Corr, C., and Baker, B. (1994). The product of the tobacco mosaic virus resistance gene N: Similarity to Toll and the interleukin-1 receptor. Cell 78, 1101-1115.