메뉴 건너뛰기




Volumn 9, Issue 10, 2013, Pages

Sensitive Detection of Viral Transcripts in Human Tumor Transcriptomes

Author keywords

[No Author keywords available]

Indexed keywords

DISEASES; TUMORS;

EID: 84886836952     PISSN: 1553734X     EISSN: 15537358     Source Type: Journal    
DOI: 10.1371/journal.pcbi.1003228     Document Type: Article
Times cited : (24)

References (94)
  • 1
    • 78649489748 scopus 로고    scopus 로고
    • Why do viruses cause cancer? Highlights of the first century of human tumour virology
    • Moore PS, Chang Y, (2010) Why do viruses cause cancer? Highlights of the first century of human tumour virology. Nat Rev Cancer 10: 878-889.
    • (2010) Nat Rev Cancer , vol.10 , pp. 878-889
    • Moore, P.S.1    Chang, Y.2
  • 2
    • 33646413672 scopus 로고    scopus 로고
    • The global health burden of infection-associated cancers in the year 2002
    • Parkin DM, (2006) The global health burden of infection-associated cancers in the year 2002. Int J Cancer 118: 3030-3044.
    • (2006) Int J Cancer , vol.118 , pp. 3030-3044
    • Parkin, D.M.1
  • 3
    • 79955465352 scopus 로고    scopus 로고
    • Viruses and human cancer: from detection to causality
    • Sarid R, Gao SJ, (2011) Viruses and human cancer: from detection to causality. Cancer Lett 305: 218-227.
    • (2011) Cancer Lett , vol.305 , pp. 218-227
    • Sarid, R.1    Gao, S.J.2
  • 4
    • 77956385180 scopus 로고    scopus 로고
    • Vaccines to prevent infections by oncoviruses
    • Schiller JT, Lowy DR, (2010) Vaccines to prevent infections by oncoviruses. Annu Rev Microbiol 64: 23-41.
    • (2010) Annu Rev Microbiol , vol.64 , pp. 23-41
    • Schiller, J.T.1    Lowy, D.R.2
  • 6
    • 84859157322 scopus 로고    scopus 로고
    • Red meat consumption and cancer: reasons to suspect involvement of bovine infectious factors in colorectal cancer
    • zur Hausen H, (2012) Red meat consumption and cancer: reasons to suspect involvement of bovine infectious factors in colorectal cancer. Int J Cancer 130: 2475-2483.
    • (2012) Int J Cancer , vol.130 , pp. 2475-2483
    • Zur Hausen, H.1
  • 7
    • 77951115122 scopus 로고    scopus 로고
    • International network of cancer genome projects
    • International Cancer Genome Consortium
    • International Cancer Genome Consortium (2010) Hudson TJ, Anderson W, Artez A, Barker AD, et al. (2010) International network of cancer genome projects. Nature 464: 993-998.
    • (2010) Nature , vol.464 , pp. 993-998
    • Hudson, T.J.1    Anderson, W.2    Artez, A.3    Barker, A.D.4
  • 8
    • 69249090079 scopus 로고    scopus 로고
    • The search for infectious causes of human cancers: where and why
    • zur Hausen H, (2009) The search for infectious causes of human cancers: where and why. Virology 392: 1-10.
    • (2009) Virology , vol.392 , pp. 1-10
    • Zur Hausen, H.1
  • 9
    • 54249127873 scopus 로고    scopus 로고
    • The History of Tumor Virology
    • Javier RT, Butel JS, (2008) The History of Tumor Virology. Cancer Research 68: 7693-7706.
    • (2008) Cancer Research , vol.68 , pp. 7693-7706
    • Javier, R.T.1    Butel, J.S.2
  • 10
    • 0037366067 scopus 로고    scopus 로고
    • Neuroblastoma: biological insights into a clinical enigma
    • Brodeur GM, (2003) Neuroblastoma: biological insights into a clinical enigma. Nat Rev Cancer 3: 203-216.
    • (2003) Nat Rev Cancer , vol.3 , pp. 203-216
    • Brodeur, G.M.1
  • 12
    • 77949647233 scopus 로고    scopus 로고
    • Molecular pathogenesis of peripheral neuroblastic tumors
    • Janoueix-Lerosey I, Schleiermacher G, Delattre O, (2010) Molecular pathogenesis of peripheral neuroblastic tumors. Oncogene 29: 1566-1579.
    • (2010) Oncogene , vol.29 , pp. 1566-1579
    • Janoueix-Lerosey, I.1    Schleiermacher, G.2    Delattre, O.3
  • 13
    • 77953022239 scopus 로고    scopus 로고
    • Epidemiology of childhood cancer
    • Kaatsch P, (2010) Epidemiology of childhood cancer. Cancer Treat Rev 36: 277-285.
    • (2010) Cancer Treat Rev , vol.36 , pp. 277-285
    • Kaatsch, P.1
  • 14
    • 0015236227 scopus 로고
    • Special pattern of widespread neuroblastoma with a favourable prognosis
    • D'Angio GJ, Evans AE, Koop CE, (1971) Special pattern of widespread neuroblastoma with a favourable prognosis. Lancet 1: 1046-1049.
    • (1971) Lancet , vol.1 , pp. 1046-1049
    • D'Angio, G.J.1    Evans, A.E.2    Koop, C.E.3
  • 17
    • 33749028997 scopus 로고    scopus 로고
    • Differential expression of neuronal genes defines subtypes of disseminated neuroblastoma with favorable and unfavorable outcome
    • Fischer M, Oberthuer A, Brors B, Kahlert Y, Skowron M, et al. (2006) Differential expression of neuronal genes defines subtypes of disseminated neuroblastoma with favorable and unfavorable outcome. Clin Cancer Res 12: 5118-5128.
    • (2006) Clin Cancer Res , vol.12 , pp. 5118-5128
    • Fischer, M.1    Oberthuer, A.2    Brors, B.3    Kahlert, Y.4    Skowron, M.5
  • 18
    • 33847363217 scopus 로고    scopus 로고
    • Childhood acute lymphoblastic leukemia and infections in the first year of life: a report from the United Kingdom Childhood Cancer Study
    • Roman E, Simpson J, Ansell P, Kinsey S, Mitchell CD, et al. (2007) Childhood acute lymphoblastic leukemia and infections in the first year of life: a report from the United Kingdom Childhood Cancer Study. Am J Epidemiol 165: 496-504.
    • (2007) Am J Epidemiol , vol.165 , pp. 496-504
    • Roman, E.1    Simpson, J.2    Ansell, P.3    Kinsey, S.4    Mitchell, C.D.5
  • 21
    • 69249141947 scopus 로고    scopus 로고
    • Childhood leukemias and other hematopoietic malignancies: interdependence between an infectious event and chromosomal modifications
    • zur Hausen H, (2009) Childhood leukemias and other hematopoietic malignancies: interdependence between an infectious event and chromosomal modifications. Int J Cancer 125: 1764-1770.
    • (2009) Int J Cancer , vol.125 , pp. 1764-1770
    • Zur Hausen, H.1
  • 22
    • 0033647385 scopus 로고    scopus 로고
    • Human polyomavirus BK (BKV) and neuroblastoma: mechanisms of oncogenic action and possible strategy for novel treatment
    • Jørgensen GE, Johnsen JI, Ponthan F, Kogner P, Flaegstad T, et al. (2000) Human polyomavirus BK (BKV) and neuroblastoma: mechanisms of oncogenic action and possible strategy for novel treatment. Med Pediatr Oncol 35: 593-596.
    • (2000) Med Pediatr Oncol , vol.35 , pp. 593-596
    • Jørgensen, G.E.1    Johnsen, J.I.2    Ponthan, F.3    Kogner, P.4    Flaegstad, T.5
  • 23
    • 0033613087 scopus 로고    scopus 로고
    • Detection of human neurotropic JC virus DNA sequence and expression of the viral oncogenic protein in pediatric medulloblastomas
    • Krynska B, Del Valle L, Croul S, Gordon J, Katsetos CD, et al. (1999) Detection of human neurotropic JC virus DNA sequence and expression of the viral oncogenic protein in pediatric medulloblastomas. Proc Natl Acad Sci USA 96: 11519-11524.
    • (1999) Proc Natl Acad Sci USA , vol.96 , pp. 11519-11524
    • Krynska, B.1    Del Valle, L.2    Croul, S.3    Gordon, J.4    Katsetos, C.D.5
  • 25
    • 11144344928 scopus 로고    scopus 로고
    • Maternal human polyomavirus infection and risk of neuroblastoma in the child
    • Stolt A, Kjellin M, Sasnauskas K, Luostarinen T, Koskela P, et al. (2005) Maternal human polyomavirus infection and risk of neuroblastoma in the child. Int J Cancer 113: 393-396.
    • (2005) Int J Cancer , vol.113 , pp. 393-396
    • Stolt, A.1    Kjellin, M.2    Sasnauskas, K.3    Luostarinen, T.4    Koskela, P.5
  • 26
    • 0036330981 scopus 로고    scopus 로고
    • The Phage Proteomic Tree: a genome-based taxonomy for phage
    • Rohwer F, Edwards R, (2002) The Phage Proteomic Tree: a genome-based taxonomy for phage. J Bacteriol 184: 4529-4535.
    • (2002) J Bacteriol , vol.184 , pp. 4529-4535
    • Rohwer, F.1    Edwards, R.2
  • 27
    • 82855177787 scopus 로고    scopus 로고
    • Metagenomics and the molecular identification of novel viruses
    • Bexfield N, Kellam P, (2011) Metagenomics and the molecular identification of novel viruses. Vet J 190: 191-198.
    • (2011) Vet J , vol.190 , pp. 191-198
    • Bexfield, N.1    Kellam, P.2
  • 28
    • 0028588064 scopus 로고
    • Identification of herpesvirus-like DNA sequences in AIDS-associated Kaposi's sarcoma
    • Chang Y, Cesarman E, Pessin MS, Lee F, Culpepper J, et al. (1994) Identification of herpesvirus-like DNA sequences in AIDS-associated Kaposi's sarcoma. Science 266: 1865-1869.
    • (1994) Science , vol.266 , pp. 1865-1869
    • Chang, Y.1    Cesarman, E.2    Pessin, M.S.3    Lee, F.4    Culpepper, J.5
  • 29
    • 80051670359 scopus 로고    scopus 로고
    • No evidence of viral genomes in whole-transcriptome sequencing of three melanoma metastases
    • Feldhahn M, Menzel M, Weide B, Bauer P, Meckbach D, et al. (2011) No evidence of viral genomes in whole-transcriptome sequencing of three melanoma metastases. Exp Dermatol 20: 766-768.
    • (2011) Exp Dermatol , vol.20 , pp. 766-768
    • Feldhahn, M.1    Menzel, M.2    Weide, B.3    Bauer, P.4    Meckbach, D.5
  • 30
    • 79960297210 scopus 로고    scopus 로고
    • Transcriptome sequencing demonstrates that human papillomavirus is not active in cutaneous squamous cell carcinoma
    • Arron ST, Ruby JG, Dybbro E, Ganem D, DeRisi JL, (2011) Transcriptome sequencing demonstrates that human papillomavirus is not active in cutaneous squamous cell carcinoma. J Invest Dermatol 131: 1745-1753.
    • (2011) J Invest Dermatol , vol.131 , pp. 1745-1753
    • Arron, S.T.1    Ruby, J.G.2    Dybbro, E.3    Ganem, D.4    DeRisi, J.L.5
  • 31
    • 39749113080 scopus 로고    scopus 로고
    • Clonal integration of a polyomavirus in human Merkel cell carcinoma
    • Feng H, Shuda M, Chang Y, Moore PS, (2008) Clonal integration of a polyomavirus in human Merkel cell carcinoma. Science 319: 1096-1100.
    • (2008) Science , vol.319 , pp. 1096-1100
    • Feng, H.1    Shuda, M.2    Chang, Y.3    Moore, P.S.4
  • 34
    • 35148898713 scopus 로고    scopus 로고
    • Human transcriptome subtraction by using short sequence tags to search for tumor viruses in conjunctival carcinoma
    • Feng H, Taylor JL, Benos PV, Newton R, Waddell K, et al. (2007) Human transcriptome subtraction by using short sequence tags to search for tumor viruses in conjunctival carcinoma. J Virol 81: 11332-11340.
    • (2007) J Virol , vol.81 , pp. 11332-11340
    • Feng, H.1    Taylor, J.L.2    Benos, P.V.3    Newton, R.4    Waddell, K.5
  • 35
    • 79955930966 scopus 로고    scopus 로고
    • The sensitivity of massively parallel sequencing for detecting candidate infectious agents associated with human tissue
    • Moore RA, Warren RL, Freeman JD, Gustavsen JA, Chénard C, et al. (2011) The sensitivity of massively parallel sequencing for detecting candidate infectious agents associated with human tissue. PLoS ONE 6: e19838.
    • (2011) PLoS ONE , vol.6
    • Moore, R.A.1    Warren, R.L.2    Freeman, J.D.3    Gustavsen, J.A.4    Chénard, C.5
  • 36
    • 0037345377 scopus 로고    scopus 로고
    • Pathogen discovery from human tissue by sequence-based computational subtraction
    • Xu Y, Stange-Thomann N, Weber G, Bo R, Dodge S, et al. (2003) Pathogen discovery from human tissue by sequence-based computational subtraction. Genomics 81: 329-335.
    • (2003) Genomics , vol.81 , pp. 329-335
    • Xu, Y.1    Stange-Thomann, N.2    Weber, G.3    Bo, R.4    Dodge, S.5
  • 37
    • 0036479008 scopus 로고    scopus 로고
    • Identification of foreign gene sequences by transcript filtering against the human genome
    • Weber G, Shendure J, Tanenbaum DM, Church GM, Meyerson M, (2002) Identification of foreign gene sequences by transcript filtering against the human genome. Nat Genet 30: 141-142.
    • (2002) Nat Genet , vol.30 , pp. 141-142
    • Weber, G.1    Shendure, J.2    Tanenbaum, D.M.3    Church, G.M.4    Meyerson, M.5
  • 38
    • 79960417564 scopus 로고    scopus 로고
    • Pathogen detection using short-RNA deep sequencing subtraction and assembly
    • Isakov O, Modai S, Shomron N, (2011) Pathogen detection using short-RNA deep sequencing subtraction and assembly. Bioinformatics 27: 2027-2030.
    • (2011) Bioinformatics , vol.27 , pp. 2027-2030
    • Isakov, O.1    Modai, S.2    Shomron, N.3
  • 39
    • 84857580322 scopus 로고    scopus 로고
    • De novo identification of viral pathogens from cell culture hologenomes
    • Patowary A, Chauhan RK, Singh M, Kv S, Periwal V, et al. (2012) De novo identification of viral pathogens from cell culture hologenomes. BMC Res Notes 5: 11.
    • (2012) BMC Res Notes , vol.5 , pp. 11
    • Patowary, A.1    Chauhan, R.K.2    Singh, M.3    Kv, S.4    Periwal, V.5
  • 40
    • 80052925217 scopus 로고    scopus 로고
    • Discovery of DNA Viruses in Wild-Caught Mosquitoes Using Small RNA High throughput Sequencing
    • Ma M, Huang Y, Gong Z, Zhuang L, Li C, et al. (2011) Discovery of DNA Viruses in Wild-Caught Mosquitoes Using Small RNA High throughput Sequencing. PLoS ONE 6: e24758.
    • (2011) PLoS ONE , vol.6
    • Ma, M.1    Huang, Y.2    Gong, Z.3    Zhuang, L.4    Li, C.5
  • 41
    • 67349170750 scopus 로고    scopus 로고
    • Complete viral genome sequence and discovery of novel viruses by deep sequencing of small RNAs: a generic method for diagnosis, discovery and sequencing of viruses
    • Kreuze JF, Perez A, Untiveros M, Quispe D, Fuentes S, et al. (2009) Complete viral genome sequence and discovery of novel viruses by deep sequencing of small RNAs: a generic method for diagnosis, discovery and sequencing of viruses. Virology 388: 1-7.
    • (2009) Virology , vol.388 , pp. 1-7
    • Kreuze, J.F.1    Perez, A.2    Untiveros, M.3    Quispe, D.4    Fuentes, S.5
  • 42
    • 40449115382 scopus 로고    scopus 로고
    • A new arenavirus in a cluster of fatal transplant-associated diseases
    • Palacios G, Druce J, Du L, Tran T, Birch C, et al. (2008) A new arenavirus in a cluster of fatal transplant-associated diseases. N Engl J Med 358: 991-998.
    • (2008) N Engl J Med , vol.358 , pp. 991-998
    • Palacios, G.1    Druce, J.2    Du, L.3    Tran, T.4    Birch, C.5
  • 43
    • 76249103869 scopus 로고    scopus 로고
    • Virus discovery by deep sequencing and assembly of virus-derived small silencing RNAs
    • Wu Q, Luo Y, Lu R, Lau N, Lai EC, et al. (2010) Virus discovery by deep sequencing and assembly of virus-derived small silencing RNAs. Proc Natl Acad Sci USA 107: 1606-1611.
    • (2010) Proc Natl Acad Sci USA , vol.107 , pp. 1606-1611
    • Wu, Q.1    Luo, Y.2    Lu, R.3    Lau, N.4    Lai, E.C.5
  • 44
    • 79955778143 scopus 로고    scopus 로고
    • PathSeq: software to identify or discover microbes by deep sequencing of human tissue
    • Kostic AD, Ojesina AI, Pedamallu CS, Jung J, Verhaak RGW, et al. (2011) PathSeq: software to identify or discover microbes by deep sequencing of human tissue. Nat Biotechnol 29: 393-396.
    • (2011) Nat Biotechnol , vol.29 , pp. 393-396
    • Kostic, A.D.1    Ojesina, A.I.2    Pedamallu, C.S.3    Jung, J.4    Verhaak, R.G.W.5
  • 45
    • 84859770226 scopus 로고    scopus 로고
    • Rapid identification of non-human sequences in high-throughput sequencing datasets
    • Bhaduri A, Qu K, Lee CS, Ungewickell A, Khavari PA, (2012) Rapid identification of non-human sequences in high-throughput sequencing datasets. Bioinformatics 28: 1174-1175.
    • (2012) Bioinformatics , vol.28 , pp. 1174-1175
    • Bhaduri, A.1    Qu, K.2    Lee, C.S.3    Ungewickell, A.4    Khavari, P.A.5
  • 46
    • 84865057594 scopus 로고    scopus 로고
    • CaPSID: A bioinformatics platform for computational pathogen sequence identification in human genomes and transcriptomes
    • Borozan I, Wilson S, Blanchette P, Laamme P, Watt SN, et al. (2012) CaPSID: A bioinformatics platform for computational pathogen sequence identification in human genomes and transcriptomes. BMC Bioinformatics 13: 206.
    • (2012) BMC Bioinformatics , vol.13 , pp. 206
    • Borozan, I.1    Wilson, S.2    Blanchette, P.3    Laamme, P.4    Watt, S.N.5
  • 47
    • 0034060617 scopus 로고    scopus 로고
    • Viral carcinogenesis: revelation of molecular mechanisms and etiology of human disease
    • Butel JS, (2000) Viral carcinogenesis: revelation of molecular mechanisms and etiology of human disease. Carcinogenesis 21: 405-426.
    • (2000) Carcinogenesis , vol.21 , pp. 405-426
    • Butel, J.S.1
  • 48
    • 40849097775 scopus 로고    scopus 로고
    • Rates of evolutionary change in viruses: patterns and determinants
    • Duffy S, Shackelton LA, Holmes EC, (2008) Rates of evolutionary change in viruses: patterns and determinants. Nat Rev Genet 9: 267-276.
    • (2008) Nat Rev Genet , vol.9 , pp. 267-276
    • Duffy, S.1    Shackelton, L.A.2    Holmes, E.C.3
  • 49
    • 77954440480 scopus 로고    scopus 로고
    • Using time-structured data to estimate evolutionary rates of double-stranded DNA viruses
    • Firth C, Kitchen A, Shapiro B, Suchard MA, Holmes EC, et al. (2010) Using time-structured data to estimate evolutionary rates of double-stranded DNA viruses. Mol Biol Evol 27: 2038-2051.
    • (2010) Mol Biol Evol , vol.27 , pp. 2038-2051
    • Firth, C.1    Kitchen, A.2    Shapiro, B.3    Suchard, M.A.4    Holmes, E.C.5
  • 50
    • 0037734164 scopus 로고    scopus 로고
    • FISH analyses for alterations in chromosomes 1, 2, 3, and 11 define high-risk groups in neuroblastoma
    • Spitz R, Hero B, Ernestus K, Berthold F, (2003) FISH analyses for alterations in chromosomes 1, 2, 3, and 11 define high-risk groups in neuroblastoma. Med Pediatr Oncol 41: 30-35.
    • (2003) Med Pediatr Oncol , vol.41 , pp. 30-35
    • Spitz, R.1    Hero, B.2    Ernestus, K.3    Berthold, F.4
  • 52
    • 84874720727 scopus 로고    scopus 로고
    • ViralFusionSeq: accurately discover viral integration events and reconstruct fusion transcripts at single-base resolution
    • Li JW, Wan R, Yu CS, Co NN, Wong N, et al. (2013) ViralFusionSeq: accurately discover viral integration events and reconstruct fusion transcripts at single-base resolution. Bioinformatics 29: 649-651.
    • (2013) Bioinformatics , vol.29 , pp. 649-651
    • Li, J.W.1    Wan, R.2    Yu, C.S.3    Co, N.N.4    Wong, N.5
  • 60
    • 79960264362 scopus 로고    scopus 로고
    • Fulllength transcriptome assembly from RNA-Seq data without a reference genome
    • Grabherr MG, Haas BJ, Yassour M, Levin JZ, Thompson DA, et al. (2011) Fulllength transcriptome assembly from RNA-Seq data without a reference genome. Nat Biotechnol 29: 644-652.
    • (2011) Nat Biotechnol , vol.29 , pp. 644-652
    • Grabherr, M.G.1    Haas, B.J.2    Yassour, M.3    Levin, J.Z.4    Thompson, D.A.5
  • 61
    • 84859768479 scopus 로고    scopus 로고
    • Oases: robust de novo RNA-seq assembly across the dynamic range of expression levels
    • Schulz MH, Zerbino DR, Vingron M, Birney E, (2012) Oases: robust de novo RNA-seq assembly across the dynamic range of expression levels. Bioinformatics 28: 1086-1092.
    • (2012) Bioinformatics , vol.28 , pp. 1086-1092
    • Schulz, M.H.1    Zerbino, D.R.2    Vingron, M.3    Birney, E.4
  • 64
    • 77950806408 scopus 로고    scopus 로고
    • New algorithms and methods to estimate maximum-likelihood phylogenies: assessing the performance of PhyML 3.0
    • Guindon S, Dufayard JF, Lefort V, Anisimova M, Hordijk W, et al. (2010) New algorithms and methods to estimate maximum-likelihood phylogenies: assessing the performance of PhyML 3.0. Syst Biol 59: 307-321.
    • (2010) Syst Biol , vol.59 , pp. 307-321
    • Guindon, S.1    Dufayard, J.F.2    Lefort, V.3    Anisimova, M.4    Hordijk, W.5
  • 67
    • 77950637746 scopus 로고    scopus 로고
    • Some Suggestions for Teaching About Normal Approximations to Poisson and Binomial Distribution Functions
    • Lesch SM, Jeske DR, (2009) Some Suggestions for Teaching About Normal Approximations to Poisson and Binomial Distribution Functions. The American Statistician 63: 274-277.
    • (2009) The American Statistician , vol.63 , pp. 274-277
    • Lesch, S.M.1    Jeske, D.R.2
  • 70
    • 0037435038 scopus 로고    scopus 로고
    • Quantitation of HERV-K env gene expression and splicing in human breast cancer
    • Wang-Johanning F, Frost AR, Jian B, Epp L, Lu DW, et al. (2003) Quantitation of HERV-K env gene expression and splicing in human breast cancer. Oncogene 22: 1528-1535.
    • (2003) Oncogene , vol.22 , pp. 1528-1535
    • Wang-Johanning, F.1    Frost, A.R.2    Jian, B.3    Epp, L.4    Lu, D.W.5
  • 71
    • 84860485003 scopus 로고    scopus 로고
    • Optimizing de novo transcriptome assembly from short-read RNA-Seq data: a comparative study
    • Zhao QY, Wang Y, Kong YM, Luo D, Li X, et al. (2011) Optimizing de novo transcriptome assembly from short-read RNA-Seq data: a comparative study. BMC Bioinformatics 12 Suppl 14: S2.
    • (2011) BMC Bioinformatics , vol.12 , Issue.SUPPL.
    • Zhao, Q.Y.1    Wang, Y.2    Kong, Y.M.3    Luo, D.4    Li, X.5
  • 72
    • 0035956211 scopus 로고    scopus 로고
    • Oncogenic DNA viruses
    • zur Hausen H, (2001) Oncogenic DNA viruses. Oncogene 20: 7820-7823.
    • (2001) Oncogene , vol.20 , pp. 7820-7823
    • Zur Hausen, H.1
  • 73
    • 27944464545 scopus 로고    scopus 로고
    • Recent lessons in gene expression, cell cycle control, and cell biology from adenovirus
    • Berk AJ, (2005) Recent lessons in gene expression, cell cycle control, and cell biology from adenovirus. Oncogene 24: 7673-7685.
    • (2005) Oncogene , vol.24 , pp. 7673-7685
    • Berk, A.J.1
  • 75
    • 33846913745 scopus 로고    scopus 로고
    • DNA viruses in human cancer: an integrated overview on fundamental mechanisms of viral carcinogenesis
    • Elgui de Oliveira D, (2007) DNA viruses in human cancer: an integrated overview on fundamental mechanisms of viral carcinogenesis. Cancer Lett 247: 182-196.
    • (2007) Cancer Lett , vol.247 , pp. 182-196
    • de Oliveira, D.E.1
  • 77
    • 25844523297 scopus 로고    scopus 로고
    • Consensus proposals for a unified system of nomenclature of hepatitis C virus genotypes
    • Simmonds P, Bukh J, Combet C, Deleage G, Enomoto N, et al. (2005) Consensus proposals for a unified system of nomenclature of hepatitis C virus genotypes. Hepatology 42: 962-973.
    • (2005) Hepatology , vol.42 , pp. 962-973
    • Simmonds, P.1    Bukh, J.2    Combet, C.3    Deleage, G.4    Enomoto, N.5
  • 78
    • 0025074342 scopus 로고
    • Contrasts in codon usage of latent versus productive genes of Epstein-Barr virus: data and hypotheses
    • Karlin S, Blaisdell BE, Schachtel GA, (1990) Contrasts in codon usage of latent versus productive genes of Epstein-Barr virus: data and hypotheses. J Virol 64: 4264-4273.
    • (1990) J Virol , vol.64 , pp. 4264-4273
    • Karlin, S.1    Blaisdell, B.E.2    Schachtel, G.A.3
  • 79
    • 40849114740 scopus 로고    scopus 로고
    • Human RNA "rumor" viruses: the search for novel human retroviruses in chronic disease
    • Voisset C, Weiss RA, Griffiths DJ, (2008) Human RNA "rumor" viruses: the search for novel human retroviruses in chronic disease. Microbiol Mol Biol Rev 72: 157-196.
    • (2008) Microbiol Mol Biol Rev , vol.72 , pp. 157-196
    • Voisset, C.1    Weiss, R.A.2    Griffiths, D.J.3
  • 80
    • 0024535228 scopus 로고
    • The human papilloma virus-16 E7 oncoprotein is able to bind to the retinoblastoma gene product
    • Dyson N, M HP, Münger K, Harlow E, (1989) The human papilloma virus-16 E7 oncoprotein is able to bind to the retinoblastoma gene product. Science 243: 934-937.
    • (1989) Science , vol.243 , pp. 934-937
    • Dyson, N.1    Münger, K.2    Harlow, E.3
  • 81
    • 0025639158 scopus 로고
    • The E6 oncoprotein encoded by human papillomavirus types 16 and 18 promotes the degradation of p53
    • Scheffner M, Werness BA, Huibregtse JM, Levine AJ, M HP, (1990) The E6 oncoprotein encoded by human papillomavirus types 16 and 18 promotes the degradation of p53. Cell 63: 1129-1136.
    • (1990) Cell , vol.63 , pp. 1129-1136
    • Scheffner, M.1    Werness, B.A.2    Huibregtse, J.M.3    Levine, A.J.4
  • 82
    • 4944266319 scopus 로고    scopus 로고
    • Epstein-Barr virus: 40 years on
    • Young LS, Rickinson AB, (2004) Epstein-Barr virus: 40 years on. Nat Rev Cancer 4: 757-768.
    • (2004) Nat Rev Cancer , vol.4 , pp. 757-768
    • Young, L.S.1    Rickinson, A.B.2
  • 83
    • 63449086437 scopus 로고    scopus 로고
    • An Epstein-Barr virus anti-apoptotic protein constitutively expressed in transformed cells and implicated in burkitt lymphomagenesis: the Wp/BHRF1 link
    • Kelly GL, Long HM, Stylianou J, Thomas WA, Leese A, et al. (2009) An Epstein-Barr virus anti-apoptotic protein constitutively expressed in transformed cells and implicated in burkitt lymphomagenesis: the Wp/BHRF1 link. PLoS Pathog 5: e1000341.
    • (2009) PLoS Pathog , vol.5
    • Kelly, G.L.1    Long, H.M.2    Stylianou, J.3    Thomas, W.A.4    Leese, A.5
  • 84
    • 33847276039 scopus 로고    scopus 로고
    • Epstein-Barr virus infection in humans: from harmless to life endangering virus-lymphocyte interactions
    • Klein E, Kis LL, Klein G, (2007) Epstein-Barr virus infection in humans: from harmless to life endangering virus-lymphocyte interactions. Oncogene 26: 1297-1305.
    • (2007) Oncogene , vol.26 , pp. 1297-1305
    • Klein, E.1    Kis, L.L.2    Klein, G.3
  • 85
    • 77953787613 scopus 로고    scopus 로고
    • Merkel cell polyomavirus-infected Merkel cell carcinoma cells require expression of viral T antigens
    • Houben R, Shuda M, Weinkam R, Schrama D, Feng H, et al. (2010) Merkel cell polyomavirus-infected Merkel cell carcinoma cells require expression of viral T antigens. J Virol 84: 7064-7072.
    • (2010) J Virol , vol.84 , pp. 7064-7072
    • Houben, R.1    Shuda, M.2    Weinkam, R.3    Schrama, D.4    Feng, H.5
  • 87
    • 0025141405 scopus 로고
    • Levels of Epstein-Barr virus DNA in lymphoblastoid cell lines are correlated with frequencies of spontaneous lytic growth but not with levels of expression of EBNA-1, EBNA-2, or latent membrane protein
    • Metzenberg S, (1990) Levels of Epstein-Barr virus DNA in lymphoblastoid cell lines are correlated with frequencies of spontaneous lytic growth but not with levels of expression of EBNA-1, EBNA-2, or latent membrane protein. J Virol 64: 437-444.
    • (1990) J Virol , vol.64 , pp. 437-444
    • Metzenberg, S.1
  • 89
    • 0023010394 scopus 로고
    • Nucleotide sequence of human endogenous retrovirus genome related to the mouse mammary tumor virus genome
    • Ono M, Yasunaga T, Miyata T, Ushikubo H, (1986) Nucleotide sequence of human endogenous retrovirus genome related to the mouse mammary tumor virus genome. J Virol 60: 589-598.
    • (1986) J Virol , vol.60 , pp. 589-598
    • Ono, M.1    Yasunaga, T.2    Miyata, T.3    Ushikubo, H.4
  • 90
    • 34547642493 scopus 로고    scopus 로고
    • Distinct classes of chromosomal rearrangements create oncogenic ETS gene fusions in prostate cancer
    • Tomlins SA, Laxman B, Dhanasekaran SM, Helgeson BE, Cao X, et al. (2007) Distinct classes of chromosomal rearrangements create oncogenic ETS gene fusions in prostate cancer. Nature 448: 595-599.
    • (2007) Nature , vol.448 , pp. 595-599
    • Tomlins, S.A.1    Laxman, B.2    Dhanasekaran, S.M.3    Helgeson, B.E.4    Cao, X.5
  • 91
    • 30344456725 scopus 로고    scopus 로고
    • Kaposi's sarcoma-associated herpesvirus-encoded latencyassociated nuclear antigen induces chromosomal instability through inhibition of p53 function
    • Si H, Robertson ES, (2006) Kaposi's sarcoma-associated herpesvirus-encoded latencyassociated nuclear antigen induces chromosomal instability through inhibition of p53 function. J Virol 80: 697-709.
    • (2006) J Virol , vol.80 , pp. 697-709
    • Si, H.1    Robertson, E.S.2
  • 93
    • 79955756836 scopus 로고    scopus 로고
    • Design and validation issues in RNA-seq experiments
    • Fang Z, Cui X, (2011) Design and validation issues in RNA-seq experiments. Brief Bioinform 12: 280-287.
    • (2011) Brief Bioinform , vol.12 , pp. 280-287
    • Fang, Z.1    Cui, X.2
  • 94
    • 5144227841 scopus 로고    scopus 로고
    • Retroelements and the human genome: new perspectives on an old relation
    • Bannert N, Kurth R, (2004) Retroelements and the human genome: new perspectives on an old relation. Proc Natl Acad Sci USA 101 Suppl 2: 14572-14579.
    • (2004) Proc Natl Acad Sci USA , vol.101 , Issue.SUPPL. , pp. 14572-14579
    • Bannert, N.1    Kurth, R.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.