-
1
-
-
36649021589
-
Mucosa-associated bacterial diversity in relation to human terminal ileum and colonic biopsy samples
-
Ahmed S, Macfarlane GT, Fite A, McBain AJ, Gilbert P, Macfarlane S. 2007. Mucosa-associated bacterial diversity in relation to human terminal ileum and colonic biopsy samples. Appl. Environ Microbiol. 73:7435-7442.
-
(2007)
Appl. Environ Microbiol.
, vol.73
, pp. 7435-7442
-
-
Ahmed, S.1
Macfarlane, G.T.2
Fite, A.3
McBain, A.J.4
Gilbert, P.5
Macfarlane, S.6
-
2
-
-
0028946084
-
Phylogenetic identification and in situ detection of individual microbial cells without cultivation
-
Amann RI, Ludwig W, Schleifer KH. 1995. Phylogenetic identification and in situ detection of individual microbial cells without cultivation. Microbiol. Rev. 59:143-169.
-
(1995)
Microbiol. Rev.
, vol.59
, pp. 143-169
-
-
Amann, R.I.1
Ludwig, W.2
Schleifer, K.H.3
-
3
-
-
50949131523
-
Comparative analysis of human gut microbiota by barcoded pyrosequencing
-
e2836
-
Andersson AF, Lindberg M, Jakobsson H, Backhed F, Nyren P, et al. 2008. Comparative analysis of human gut microbiota by barcoded pyrosequencing. PLoS ONE 3:e2836.
-
(2008)
PLoS ONE
, vol.3
-
-
Andersson, A.F.1
Lindberg, M.2
Jakobsson, H.3
Backhed, F.4
Nyren, P.5
-
4
-
-
77956908458
-
A human volunteer study to assess the impact of confectionery sweeteners on the gut microbiota composition
-
Beards E, Tuohy K, Gibson G. 2010. A human volunteer study to assess the impact of confectionery sweeteners on the gut microbiota composition. Br. J. Nutr. 104:701-708.
-
(2010)
Br. J. Nutr.
, vol.104
, pp. 701-708
-
-
Beards, E.1
Tuohy, K.2
Gibson, G.3
-
5
-
-
0001677717
-
Controlling false discovery rate: A practical and powerful approach to multiple testing
-
Benjamini Y, Hochberg Y. 1995. Controlling false discovery rate: A practical and powerful approach to multiple testing. J. R. Stat. Soc. B 57:289-300.
-
(1995)
J. R. Stat. Soc. B
, vol.57
, pp. 289-300
-
-
Benjamini, Y.1
Hochberg, Y.2
-
6
-
-
0035733108
-
The control of false discovery rate in multiple testing under dependency
-
Benjamini Y, Yekutieli D. 2001. The control of false discovery rate in multiple testing under dependency. Ann. Stat. 29:1165-1188.
-
(2001)
Ann. Stat.
, vol.29
, pp. 1165-1188
-
-
Benjamini, Y.1
Yekutieli, D.2
-
7
-
-
33747050143
-
The bacteriology of biopsies differs between newly diagnosed, untreated Crohn's disease and ulcerative colitis patients
-
Bibiloni R, Mangold M, Madsen KL, Fedorak RN, Tannock GW. 2006. The bacteriology of biopsies differs between newly diagnosed, untreated, Crohn's disease and ulcerative colitis patients. J. Med Microbiol. 55:1141-1149.
-
(2006)
J. Med Microbiol.
, vol.55
, pp. 1141-1149
-
-
Bibiloni, R.1
Mangold, M.2
Madsen, K.L.3
Fedorak, R.N.4
Tannock, G.W.5
-
8
-
-
31444449652
-
Molecular analysis of the bacterial microbiota in the human stomach Proc
-
Bik EM, Eckburg PB, Gill SR, Nelson KE, Purdom EA, et al. 2006 Molecular analysis of the bacterial microbiota in the human stomach Proc. Natl. Acad. Sci. USA 103:732-737.
-
(2006)
Natl. Acad. Sci. USA
, vol.103
, pp. 732-737
-
-
Bik, E.M.1
Eckburg, P.B.2
Gill, S.R.3
Nelson, K.E.4
Purdom, E.A.5
-
9
-
-
33947186284
-
Metabolic diversity of the intestinal microbiota: Implications for health and disease
-
Blaut M, Clavel T. 2007. Metabolic diversity of the intestinal microbiota: Implications for health and disease. J. Nutr. 137:751S-755S.
-
(2007)
J. Nutr.
, vol.137
-
-
Blaut, M.1
Clavel, T.2
-
10
-
-
0035989425
-
Differences in rDNA libraries of faecal bacteria derived from 10- and 25-cycle PCRs
-
Bonnet R, Suau A, Dore J, Gibson GR, Collins MD. 2002. Differences in rDNA libraries of faecal bacteria derived from 10- and 25-cycle PCRs. Int. J. Syst. Evol. Microbiol. 52:757-763.
-
(2002)
Int. J. Syst. Evol. Microbiol.
, vol.52
, pp. 757-763
-
-
Bonnet, R.1
Suau, A.2
Dore, J.3
Gibson, G.R.4
Collins, M.D.5
-
11
-
-
60549097418
-
Imbalances in faecal and duodenal Bifidobacterium species composition in active and non-active coeliac disease
-
Collado MC, Donat E, Ribes-Koninckx C, Calabuig M, Sanz Y. 2008. Imbalances in faecal and duodenal Bifidobacterium species composition in active and non-active coeliac disease. BMC Microbiol. 8:232.
-
(2008)
BMC Microbiol
, vol.8
, pp. 232
-
-
Collado, M.C.1
Donat, E.2
Ribes-Koninckx, C.3
Calabuig, M.4
Sanz, Y.5
-
12
-
-
37349031400
-
Whole-grain wheat breakfast cereal has a prebiotic effect on the human gut microbiota: A double-blind, placebo-controlled, crossover study
-
Costabile A, Klinder A, Fava F, Napolitano A, Fogliano V, et al. 2008. Whole-grain wheat breakfast cereal has a prebiotic effect on the human gut microbiota: A double-blind, placebo-controlled, crossover study. Br. J. Nutr. 99:110-120.
-
(2008)
Br. J. Nutr.
, vol.99
, pp. 110-120
-
-
Costabile, A.1
Klinder, A.2
Fava, F.3
Napolitano, A.4
Fogliano, V.5
-
13
-
-
72949091232
-
Bacterial community variation in human body habitats across space and time
-
Costello EK, Lauber CL, Hamady M, Fierer N, Gordon JI, et al. 2009. Bacterial community variation in human body habitats across space and time. Science 326:1694-1697.
-
(2009)
Science
, vol.326
, pp. 1694-1697
-
-
Costello, E.K.1
Lauber, C.L.2
Hamady, M.3
Fierer, N.4
Gordon, J.I.5
-
14
-
-
51949105732
-
1H NMR and UPLC-MS(E) statistical heterospectroscopy: characterization of drug metabolites (xenometabolome) in epidemiological studies
-
Crockford DJ, Maher AD, Ahmadi KR, Barrett A, Plumb RS, et al. 2008. 1H NMR and UPLC-MS(E) statistical heterospectroscopy: characterization of drug metabolites (xenometabolome) in epidemiological studies. Anal. Chem. 80:6835-6844.
-
(2008)
Anal. Chem.
, vol.80
, pp. 6835-6844
-
-
Crockford, D.J.1
Maher, A.D.2
Ahmadi, K.R.3
Barrett, A.4
Plumb, R.S.5
-
15
-
-
65649150743
-
Molecular characterization of the stomach microbiotain patients with gastric cancer and in controls
-
Dicksved J, Lindberg M, Rosenquist M, Enroth H, Jansson JK, et al. 2009. Molecular characterization of the stomach microbiotain patients with gastric cancer and in controls. J. Med. Microbiol 58:509-516.
-
(2009)
J. Med. Microbiol
, vol.58
, pp. 509-516
-
-
Dicksved, J.1
Lindberg, M.2
Rosenquist, M.3
Enroth, H.4
Jansson, J.K.5
-
16
-
-
20544444045
-
Diversity of the human intestinal microbial flora
-
Eckburg PB, Bik EM, Bernstein CN, Purdom E, Dethlefsen L, et al. 2005. Diversity of the human intestinal microbial flora. Science 308:1635-1638.
-
(2005)
Science
, vol.308
, pp. 1635-1638
-
-
Eckburg, P.B.1
Bik, E.M.2
Bernstein, C.N.3
Purdom, E.4
Dethlefsen, L.5
-
17
-
-
1542784653
-
Empirical Bayes analysis of a microarray experiment
-
Efron B, Tibshirani R, Storey JD, Tusher V. 2001. Empirical Bayes analysis of a microarray experiment. J. Am. Stat. Assoc. 96(456): 1151-1160.
-
(2001)
J. Am. Stat. Assoc.
, vol.96
, Issue.456
, pp. 1151-1160
-
-
Efron, B.1
Tibshirani, R.2
Storey, J.D.3
Tusher, V.4
-
18
-
-
68549132517
-
Assessment of bias associated with incomplete extraction of microbial DNA from soil Appl
-
Feinstein LM, Sul WJ, Blackwood CB. 2009. Assessment of bias associated with incomplete extraction of microbial DNA from soil Appl. Environ. Microbiol. 75:5428-5433.
-
(2009)
Environ. Microbiol.
, vol.75
, pp. 5428-5433
-
-
Feinstein, L.M.1
Sul, W.J.2
Blackwood, C.B.3
-
19
-
-
0031770742
-
Dietary modulation of the human gut microflora using prebiotics
-
Gibson GR. 1998. Dietary modulation of the human gut microflora using prebiotics. British Journal of Nutrition. 80:S209-S212.
-
(1998)
British Journal of Nutrition
, vol.80
-
-
Gibson, G.R.1
-
20
-
-
33744804299
-
Metagenomic analysis of the human distal gut microbiome
-
Gill SR, Pop M, Deboy RT, Eckburg PB, Turnbaugh PJ, et al. 2006 Metagenomic analysis of the human distal gut microbiome. Science 312:1355-1359.
-
(2006)
Science
, vol.312
, pp. 1355-1359
-
-
Gill, S.R.1
Pop, M.2
Deboy, R.T.3
Eckburg, P.B.4
Turnbaugh, P.J.5
-
21
-
-
27644574002
-
Molecular analysis of jejunal, ileal, caecal and recto-sigmoidal human colonic microbiota using 16S rRNA gene libraries and terminal restriction fragment length polymorphism
-
Hayashi H, Takahashi R, Nishi T, Sakamoto M, Benno Y. 2005. Molecular analysis of jejunal, ileal, caecal and recto-sigmoidal human colonic microbiota using 16S rRNA gene libraries and terminal restriction fragment length polymorphism. J. Med. Microbiol 54:1093-1101.
-
(2005)
J. Med. Microbiol
, vol.54
, pp. 1093-1101
-
-
Hayashi, H.1
Takahashi, R.2
Nishi, T.3
Sakamoto, M.4
Benno, Y.5
-
22
-
-
43749087841
-
Human metabolic phenotype diversity and its association with diet and blood pressure
-
Holmes E, Loo RL, Stamler J, Bictash M, Yap IK, et al. 2008 Human metabolic phenotype diversity and its association with diet and blood pressure. Nature 453(7193): 396-400.
-
(2008)
Nature
, vol.453
, Issue.7193
, pp. 396-400
-
-
Holmes, E.1
Loo, R.L.2
Stamler, J.3
Bictash, M.4
Yap, I.K.5
-
23
-
-
0142062399
-
Evaluation of primers and PCR conditions for the analysis of 16S rRNA genes from a natural environment
-
Hongoh Y, Yuzawa H, Ohkuma M, Kudo T. 2003. Evaluation of primers and PCR conditions for the analysis of 16S rRNA genes from a natural environment. FEMS Microbiol. Lett. 221:299-304.
-
(2003)
FEMS Microbiol. Lett.
, vol.221
, pp. 299-304
-
-
Hongoh, Y.1
Yuzawa, H.2
Ohkuma, M.3
Kudo, T.4
-
24
-
-
65549147992
-
Mixed-species genomic microarray analysis of fecal samples reveals differential transcriptional responses of bifidobacteria in breast- and formula-fed infants
-
Klaassens ES, Boesten RJ, Haarman M, Knol J, Schuren FH, et al. 2009. Mixed-species genomic microarray analysis of fecal samples reveals differential transcriptional responses of bifidobacteria in breast- and formula-fed infants. Appl. Environ. Microbiol 75:2668-2676.
-
(2009)
Appl. Environ. Microbiol
, vol.75
, pp. 2668-2676
-
-
Klaassens, E.S.1
Boesten, R.J.2
Haarman, M.3
Knol, J.4
Schuren, F.H.5
-
25
-
-
38449088143
-
Comparative metagenomics revealed commonly enriched gene sets in human gut microbiomes
-
Kurokawa K, Itoh T, Kuwahara T, Oshima K, Toh H, et al. 2007 Comparative metagenomics revealed commonly enriched gene sets in human gut microbiomes. DNA Res. 14:169-181.
-
(2007)
DNA Res
, vol.14
, pp. 169-181
-
-
Kurokawa, K.1
Itoh, T.2
Kuwahara, T.3
Oshima, K.4
Toh, H.5
-
26
-
-
70449530747
-
Metagenomic study of the oral microbiota by Illumina high-throughput sequencing
-
Lazarevic V, Whiteson K, Huse S, Hernandez D, Farinelli L, et al. 2009. Metagenomic study of the oral microbiota by Illumina high-throughput sequencing. J. Microbiol. Methods 79:266-271.
-
(2009)
J. Microbiol. Methods
, vol.79
, pp. 266-271
-
-
Lazarevic, V.1
Whiteson, K.2
Huse, S.3
Hernandez, D.4
Farinelli, L.5
-
27
-
-
74249119678
-
Obesity and the human microbiome
-
Ley RE. 2010. Obesity and the human microbiome. Curr. Opin. Gastroenterol. 26:5-11.
-
(2010)
Curr. Opin. Gastroenterol.
, vol.26
, pp. 5-11
-
-
Ley, R.E.1
-
28
-
-
32944466887
-
Ecological and evolutionary forces shaping microbial diversity in the human intestine
-
Ley RE, Peterson DA, Gordon JI. 2006. Ecological and evolutionary forces shaping microbial diversity in the human intestine. Cell 124:837-848.
-
(2006)
Cell
, vol.124
, pp. 837-848
-
-
Ley, R.E.1
Peterson, D.A.2
Gordon, J.I.3
-
29
-
-
41149099000
-
Symbiotic gut microbes modulate human metabolic phenotypes
-
Li M, Wang B, Zhang M, Rantalainen M, Wang S, et al. 2008 Symbiotic gut microbes modulate human metabolic phenotypes. Proc Natl. Acad. Sci. USA 105:2117-22.
-
(2008)
Proc Natl. Acad. Sci. USA
, vol.105
, pp. 2117-2122
-
-
Li, M.1
Wang, B.2
Zhang, M.3
Rantalainen, M.4
Wang, S.5
-
30
-
-
71049159648
-
Bacterial microbiota profiling in gastritis without Helicobacter pylori infection or non-steroidal antiinflammatory drug use
-
e7985
-
Li XX, Wong GL, To KF, Wong VW, Lai LH, Chow DK, Lau JY, Sung JJ, Ding C. 2009. Bacterial microbiota profiling in gastritis without Helicobacter pylori infection or non-steroidal antiinflammatory drug use. PLoS ONE 4, e7985.
-
(2009)
PLoS ONE
, vol.4
-
-
Li, X.X.1
Wong, G.L.2
To, K.F.3
Wong, V.W.4
Lai, L.H.5
Chow, D.K.6
Lau, J.Y.7
Sung, J.J.8
Ding, C.9
-
31
-
-
0942301270
-
Colonic bacterial flora: Changing understandings in the molecular age
-
Mai V, Morris JG Jr. 2004. Colonic bacterial flora: Changing understandings in the molecular age. J. Nutr. 134:459-464.
-
(2004)
J. Nutr.
, vol.134
, pp. 459-464
-
-
Mai, V.1
Morris Jr., J.G.2
-
32
-
-
13944255868
-
Analysis of the fecal microbiota of irritable bowel syndrome patients and healthy controls with real-time PCR
-
Malinen E, Rinttil̈a T, Kajander K, M̈atẗo J, Kassinen A, et al. 2005. Analysis of the fecal microbiota of irritable bowel syndrome patients and healthy controls with real-time PCR. Am. J. Gastroenterol. 100:373-382.
-
(2005)
Am. J. Gastroenterol.
, vol.100
, pp. 373-382
-
-
Malinen, E.1
Rinttil̈a, T.2
Kajander, K.3
M̈atẗo, J.4
Kassinen, A.5
-
33
-
-
0031959006
-
Application of denaturing gradient gel electrophoresis (DGGE) and temperature gradient gel electrophoresis (TGGE) in microbial ecology
-
Muyzer G, Smalla K. 1998. Application of denaturing gradient gel electrophoresis (DGGE) and temperature gradient gel electrophoresis (TGGE) in microbial ecology. Antonie van Leeuwenhoek 73:127-141.
-
(1998)
Antonie van Leeuwenhoek
, vol.73
, pp. 127-141
-
-
Muyzer, G.1
Smalla, K.2
-
34
-
-
0027460328
-
Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes coding for 16S rRNA
-
Muyzer G, de Waal EC, Uitterlinden AG. 1993. Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes coding for 16S rRNA. Appl. Environ. Microbiol. 59:695-700.
-
(1993)
Appl. Environ. Microbiol.
, vol.59
, pp. 695-700
-
-
Muyzer, G.1
de Waal, E.C.2
Uitterlinden, A.G.3
-
35
-
-
0022422655
-
Nearly all single base substitutions in DNA fragments joined to a GC-clamp can be detected by denaturing gradient gel electrophoresis
-
Myers RM, Fischer SG, Lerman LS, Maniatis T. 1985. Nearly all single base substitutions in DNA fragments joined to a GC-clamp can be detected by denaturing gradient gel electrophoresis. Nucleic Acids Res. 13:3131-3145.
-
(1985)
Nucleic Acids Res
, vol.13
, pp. 3131-3145
-
-
Myers, R.M.1
Fischer, S.G.2
Lerman, L.S.3
Maniatis, T.4
-
36
-
-
64549100299
-
White wine phenolics are absorbed and extensively metabolized in humans
-
Nardini M, Forte M, Vrhovsek U, Mattivi F, Viola R, et al. 2009 White wine phenolics are absorbed and extensively metabolized in humans. J. Agric. Food. Chem. 57:2711-2718.
-
(2009)
J. Agric. Food. Chem.
, vol.57
, pp. 2711-2718
-
-
Nardini, M.1
Forte, M.2
Vrhovsek, U.3
Mattivi, F.4
Viola, R.5
-
37
-
-
0043069547
-
Opinion: Understanding "global" systems biology: Metabonomics and the continuum of metabolism Nat
-
Nicholson JK, Wilson ID. 2003. Opinion: Understanding "global" systems biology: Metabonomics and the continuum of metabolism Nat. Rev. Drug Discov. 2:668-676.
-
(2003)
Rev. Drug Discov.
, vol.2
, pp. 668-676
-
-
Nicholson, J.K.1
Wilson, I.D.2
-
38
-
-
70449713952
-
NIH., HMP., Working Group, Peterson, J., Garges, S., Giovanni, M., McInnes, P., et, al
-
NIH HMP Working Group, Peterson J, Garges S, Giovanni M, McInnes P, et al. 2009. The NIH Human Microbiome Project Genome Res. 19:2317-2323.
-
(2009)
, vol.19
, pp. 2317-2323
-
-
-
39
-
-
77953053846
-
-
Oozeer R, Rescigno M, Ross RP, Knol J, Blaut M, et al. 2010. Gut health: Predictive biomarkers for preventive medicine and development of functional foods. Br. J. Nutr. 103:1539-1544.
-
(2010)
Br. J. Nutr.
, vol.103
, pp. 1539-1544
-
-
Oozeer, R.1
Rescigno, M.2
Ross, R.P.3
Knol, J.4
Blaut, M.5
-
40
-
-
66249145389
-
High-throughput quantitative analysis of the human intestinal microbiota with a phylogenetic microarray
-
Paliy O, Kenche H, Abernathy F, Michail S. 2009. High-throughput quantitative analysis of the human intestinal microbiota with a phylogenetic microarray. Appl. Environ. Microbiol. 75:3572-3579.
-
(2009)
Appl. Environ. Microbiol.
, vol.75
, pp. 3572-3579
-
-
Paliy, O.1
Kenche, H.2
Abernathy, F.3
Michail, S.4
-
41
-
-
77955299181
-
Prebiotic effect of fruit and vegetable shots containing Jerusalem artichoke inulin: A human intervention study
-
Ramnani P, Gaudier E, Bingham M, van Bruggen P, Tuohy KM, et al. 2010. Prebiotic effect of fruit and vegetable shots containing Jerusalem artichoke inulin: A human intervention study. Br. J. Nutr 104:1415-1427.
-
(2010)
Br. J. Nutr
, vol.104
, pp. 1415-1427
-
-
Ramnani, P.1
Gaudier, E.2
Bingham, M.3
van Bruggen, P.4
Tuohy, K.M.5
-
42
-
-
33750093232
-
Statistically integrated metabonomic-proteomic studies on a human prostate cancer xenograft model in mice
-
Rantalainen M, Cloarec O, Beckonert O, Wilson ID, Jackson D, et al. 2006. Statistically integrated metabonomic-proteomic studies on a human prostate cancer xenograft model in mice. J. Proteome Res. 5:2642-2655.
-
(2006)
J. Proteome Res.
, vol.5
, pp. 2642-2655
-
-
Rantalainen, M.1
Cloarec, O.2
Beckonert, O.3
Wilson, I.D.4
Jackson, D.5
-
43
-
-
71949095393
-
Balancing inflammatory, lipid, and xenobiotic signaling pathways by VSL3, a biotherapeutic agent, in the treatment of inflammatory bowel disease
-
Reiff C, Delday M, Rucklidge G, Reid M, Duncan G, et al. 2009 Balancing inflammatory, lipid, and xenobiotic signaling pathways by VSL#3, a biotherapeutic agent, in the treatment of inflammatory bowel disease. Inflamm. Bowel. Dis. 15:1721-1736.
-
(2009)
Inflamm. Bowel. Dis.
, vol.15
, pp. 1721-1736
-
-
Reiff, C.1
Delday, M.2
Rucklidge, G.3
Reid, M.4
Duncan, G.5
-
44
-
-
77952019690
-
Integrated cytokine and metabolic analysis of pathological responses to parasite exposure in rodents
-
Saric J, Li JV, Swann JR, Utzinger J, Calvert G, et al. 2010 Integrated cytokine and metabolic analysis of pathological responses to parasite exposure in rodents. J. Proteome Res. 9:2255-2264.
-
(2010)
J. Proteome Res.
, vol.9
, pp. 2255-2264
-
-
Saric, J.1
Li, J.V.2
Swann, J.R.3
Utzinger, J.4
Calvert, G.5
-
45
-
-
0035146181
-
Bifidobacterial diversity in human feces detected by genus-specific PCR and denaturing gradient gel electrophoresis
-
Satokari RM, Vaughan EE, Akkermans AD, Saarela M, de Vos WM. 2001. Bifidobacterial diversity in human feces detected by genus-specific PCR and denaturing gradient gel electrophoresis. Appl Environ. Microbiol. 67:504-513.
-
(2001)
Appl Environ. Microbiol.
, vol.67
, pp. 504-513
-
-
Satokari, R.M.1
Vaughan, E.E.2
Akkermans, A.D.3
Saarela, M.4
de Vos, W.M.5
-
46
-
-
1542675244
-
Oral microbial biofilms and plaquerelated diseases: Microbial communities and their role in the shift from oral health to disease
-
Sbordone L, Bortolaia C. 2003. Oral microbial biofilms and plaquerelated diseases: Microbial communities and their role in the shift from oral health to disease. Clin. Oral Investig. 7:181-188.
-
(2003)
Clin. Oral Investig.
, vol.7
, pp. 181-188
-
-
Sbordone, L.1
Bortolaia, C.2
-
47
-
-
73949137604
-
Microbiota and SCFA in lean and overweight healthy subjects
-
Schwiertz A, Taras D, Scḧafer K, Beijer S, Bos NA, et al. 2010 Microbiota and SCFA in lean and overweight healthy subjects. Obesity (Silver Spring) 18:190-195.
-
(2010)
Obesity (Silver Spring)
, vol.18
, pp. 190-195
-
-
Schwiertz, A.1
Taras, D.2
Scḧafer, K.3
Beijer, S.4
Bos, N.A.5
-
48
-
-
34548178577
-
Relationship between periodontal infections and systemic disease
-
Seymour GJ, Ford PJ, Cullinan MP, Leishman S, Yamazaki K. 2007. Relationship between periodontal infections and systemic disease Clin. Microbiol. Infect. 13(Suppl. 4): 3-10.
-
(2007)
Clin. Microbiol. Infect.
, vol.13
, Issue.4
, pp. 3-10
-
-
Seymour, G.J.1
Ford, P.J.2
Cullinan, M.P.3
Leishman, S.4
Yamazaki, K.5
-
49
-
-
0000023099
-
Attachment of a 40-base-pair G + C-rich sequence (GC-clamp) to genomic DNA fragments by the polymerase chain reaction results in improved detection of single-base changes
-
2002. A direct approach to false discovery rates
-
Sheffield VC, Cox DR, Lerman LS, Myers RM. 1989. Attachment of a 40-base-pair G + C-rich sequence (GC-clamp) to genomic DNA fragments by the polymerase chain reaction results in improved detection of single-base changes. Proc. Natl. Acad. Sci. USA 86:232-236 Storey, J. 2002. A direct approach to false discovery rates. J. R. Statist Soc. B. 64:479-498.
-
(1989)
Proc. Natl. Acad. Sci. USA 86 232-236 Storey J. J. R. Statist Soc. B.
, vol.64
, pp. 479-498
-
-
Sheffield, V.C.1
Cox, D.R.2
Lerman, L.S.3
Myers, R.M.4
-
50
-
-
0042424602
-
Statistical significance for genomewide studies
-
Storey JD, Tibshirani R. 2003. Statistical significance for genomewide studies. Proc. Natl. Acad. Sci. USA 100:9440-9445.
-
(2003)
Proc. Natl. Acad. Sci. USA
, vol.100
, pp. 9440-9445
-
-
Storey, J.D.1
Tibshirani, R.2
-
51
-
-
0032755259
-
Direct analysis of genes encoding 16S rRNA from complex communities reveals many novel molecular species within the human gut Appl
-
Suau A, Bonnet R, Sutren M, Godon JJ, Gibson GR, et al. 1999 Direct analysis of genes encoding 16S rRNA from complex communities reveals many novel molecular species within the human gut Appl. Environ. Microbiol. 65:4799-4807.
-
(1999)
Environ. Microbiol.
, vol.65
, pp. 4799-4807
-
-
Suau, A.1
Bonnet, R.2
Sutren, M.3
Godon, J.J.4
Gibson, G.R.5
-
52
-
-
0035154504
-
Molecular assessment of intestinal microflora
-
Tannock GW. 2001. Molecular assessment of intestinal microflora. Am J. Clin. Nutr. 73:410S-414S.
-
(2001)
Am J. Clin. Nutr.
, vol.73
-
-
Tannock, G.W.1
-
53
-
-
73649148691
-
The gut microbiota in obesity and metabolic disease-A novel therapeutic target
-
Tuohy KM, Costabile A, Fava F. 2009a. The gut microbiota in obesity and metabolic disease-A novel therapeutic target. Nutr. Ther Metabol. 27:113-133.
-
(2009)
Nutr. Ther Metabol.
, vol.27
, pp. 113-133
-
-
Tuohy, K.M.1
Costabile, A.2
Fava, F.3
-
54
-
-
67650569467
-
Studying the human gut microbiota in the trans-Omics era-Focus on metagenomics and metabonomics
-
Tuohy KM, Gougoulias C, Qing Shen, Walton G, Fava F et al. 2009b. Studying the human gut microbiota in the trans-Omics era-Focus on metagenomics and metabonomics. Curr. Pharma Des. 15:1415-1427.
-
(2009)
Curr. Pharma Des.
, vol.15
, pp. 1415-1427
-
-
Tuohy, K.M.1
Gougoulias, C.2
Qing Shen3
Walton, G.4
Fava, F.5
-
55
-
-
58749112734
-
A core gut microbiome in obese and lean twins
-
Turnbaugh PJ, Hamady M, Yatsunenko T, Cantarel BL, Duncan A, et al. 2009. A core gut microbiome in obese and lean twins. Nature 457:480-484.
-
(2009)
Nature
, vol.457
, pp. 480-484
-
-
Turnbaugh, P.J.1
Hamady, M.2
Yatsunenko, T.3
Cantarel, B.L.4
Duncan, A.5
-
56
-
-
58149091806
-
The "perfect storm" for type 1 diabetes: The complex interplay between intestinal microbiota, gut permeability, and mucosal immunity
-
Vaarala O, Atkinson MA, Neu J. 2008. The "perfect storm" for type 1 diabetes: The complex interplay between intestinal microbiota, gut permeability, and mucosal immunity. Diabetes 57:2555-2562.
-
(2008)
Diabetes
, vol.57
, pp. 2555-2562
-
-
Vaarala, O.1
Atkinson, M.A.2
Neu, J.3
-
57
-
-
0345195995
-
Determination of microbial diversity in environmental samples: Pitfalls of PCR-based rRNA analysis
-
von Wintzingerode F, Gobel UB, Stackebrandt E. 1997. Determination of microbial diversity in environmental samples: Pitfalls of PCR-based rRNA analysis. FEMS Microbiol. Rev. 21:213-229.
-
(1997)
FEMS Microbiol. Rev.
, vol.21
, pp. 213-229
-
-
von Wintzingerode, F.1
Gobel, U.B.2
Stackebrandt, E.3
-
58
-
-
66749118301
-
Top- down systems biology modelling of host metabotype-microbiome associations in obese rodents
-
Waldram A, Holmes E, Wang Y, Rantalainen M, Wilson ID, et al. 2009. Top-down systems biology modelling of host metabotype-microbiome associations in obese rodents. J. Proteome Res. 8:2361-2375.
-
(2009)
J. Proteome Res.
, vol.8
, pp. 2361-2375
-
-
Waldram, A.1
Holmes, E.2
Wang, Y.3
Rantalainen, M.4
Wilson, I.D.5
-
59
-
-
0035374627
-
Detection of Lactobacillus, Pediococcus, Leuconostoc, and Weissella species in human feces by using group-specific PCR primers and denaturing gradient gel electrophoresis
-
Walter J, Hertel C, Tannock GW, Lis CM, Munro K, Hammes WP. 2001. Detection of Lactobacillus, Pediococcus, Leuconostoc, and Weissella species in human feces by using group-specific PCR primers and denaturing gradient gel electrophoresis. Appl. Environ. Microbiol 67:2578-2585.
-
(2001)
Appl. Environ. Microbiol
, vol.67
, pp. 2578-2585
-
-
Walter, J.1
Hertel, C.2
Tannock, G.W.3
Lis, C.M.4
Munro, K.5
Hammes, W.P.6
-
60
-
-
24944540682
-
Comparison of bacterial diversity along the human intestinal tract by direct cloning and sequencing of 16S rRNA genes
-
Wang M, Ahrne S, Jeppsson B, Molin G. 2005. Comparison of bacterial diversity along the human intestinal tract by direct cloning and sequencing of 16S rRNA genes. FEMSMicrobiol. Ecol. 54:219-231.
-
(2005)
FEMSMicrobiol. Ecol.
, vol.54
, pp. 219-231
-
-
Wang, M.1
Ahrne, S.2
Jeppsson, B.3
Molin, G.4
-
61
-
-
0034695684
-
A H+-gated urea channel: The link between Helicobacter pylori urease and gastric colonization
-
Weeks DL, Eskandari S, Scott DR, Sachs G. 2000. A H+-gated urea channel: The link between Helicobacter pylori urease and gastric colonization. Science 287:482-485.
-
(2000)
Science
, vol.287
, pp. 482-485
-
-
Weeks, D.L.1
Eskandari, S.2
Scott, D.R.3
Sachs, G.4
-
62
-
-
62649151803
-
Metabolomics analysis reveals large effects of gut microflora on mammalian blood metabolites
-
Wikoff WR, Anfora AT, Liu J, Schultz PG, Lesley SA, et al. 2009 Metabolomics analysis reveals large effects of gut microflora on mammalian blood metabolites. Proc Natl Acad Sci USA 106:3698-3703.
-
(2009)
Proc Natl Acad Sci USA
, vol.106
, pp. 3698-3703
-
-
Wikoff, W.R.1
Anfora, A.T.2
Liu, J.3
Schultz, P.G.4
Lesley, S.A.5
-
63
-
-
0029900986
-
Human colonic biota studied by ribosomal DNA sequence analysis
-
Wilson KH, Blitchington RB. 1996. Human colonic biota studied by ribosomal DNA sequence analysis. Appl. Environ. Microbiol 62:2273-2278.
-
(1996)
Appl. Environ. Microbiol
, vol.62
, pp. 2273-2278
-
-
Wilson, K.H.1
Blitchington, R.B.2
-
64
-
-
55249093899
-
Metabonomic and microbiological analysis of the dynamic effect of vancomycin-induced gut microbiota modification in the mouse
-
Yap IK, Li JV, Saric J, Martin FP, Davies H, et al. 2008 Metabonomic and microbiological analysis of the dynamic effect of vancomycin-induced gut microbiota modification in the mouse. J Proteome Res. 7:3718-3728.
-
(2008)
J Proteome Res
, vol.7
, pp. 3718-3728
-
-
Yap, I.K.1
Li, J.V.2
Saric, J.3
Martin, F.P.4
Davies, H.5
|