메뉴 건너뛰기




Volumn 15, Issue 11, 2013, Pages 2994-3007

Pyrosequencing-based profiling of archaeal and bacterial 16S rRNA genes identifies a novel archaeon associated with black band disease in corals

Author keywords

[No Author keywords available]

Indexed keywords

ANTHOZOA; ARCHAEA; BACTERIA (MICROORGANISMS); CYANOBACTERIA; EURYARCHAEOTA; MONTIPORA HISPIDA;

EID: 84886446972     PISSN: 14622912     EISSN: 14622920     Source Type: Journal    
DOI: 10.1111/1462-2920.12256     Document Type: Article
Times cited : (22)

References (80)
  • 1
    • 0142028837 scopus 로고    scopus 로고
    • Characterization of microbialite-forming cyanobacteria in a tropical lagoon: Tikehau Atoll, Tuamotu, French Polynesia
    • Abed, R.M.M., Golubic, S., Garcia-Pichel, F., Camoin, G.F., and Sprachta, S. (2003) Characterization of microbialite-forming cyanobacteria in a tropical lagoon: Tikehau Atoll, Tuamotu, French Polynesia. J Phycol 39: 862-873.
    • (2003) J Phycol , vol.39 , pp. 862-873
    • Abed, R.M.M.1    Golubic, S.2    Garcia-Pichel, F.3    Camoin, G.F.4    Sprachta, S.5
  • 2
    • 77954774120 scopus 로고    scopus 로고
    • The ongoing mystery of sea-floor methane
    • Alperin, M., and Hoehler, T. (2010) The ongoing mystery of sea-floor methane. Science 329: 288-289.
    • (2010) Science , vol.329 , pp. 288-289
    • Alperin, M.1    Hoehler, T.2
  • 4
    • 0001043544 scopus 로고
    • Black band disease behavior on Red Sea reef corals
    • Antonius, A. (1988) Black band disease behavior on Red Sea reef corals. Proc 6th Int Coral Reef Symp 3: 145-150.
    • (1988) Proc 6th Int Coral Reef Symp , vol.3 , pp. 145-150
    • Antonius, A.1
  • 5
    • 70449117433 scopus 로고    scopus 로고
    • Vibrio sp. as a potentially important member of the Black Band Disease (BBD) consortium in Favia sp. corals
    • Arotsker, L., Siboni, N., Ben-Dov, E., Kramarsky-Winter, E., Loya, Y., and Kushmaro, A. (2009) Vibrio sp. as a potentially important member of the Black Band Disease (BBD) consortium in Favia sp. corals. FEMS Microbiol Ecol 70: 183-192.
    • (2009) FEMS Microbiol Ecol , vol.70 , pp. 183-192
    • Arotsker, L.1    Siboni, N.2    Ben-Dov, E.3    Kramarsky-Winter, E.4    Loya, Y.5    Kushmaro, A.6
  • 7
    • 80054098909 scopus 로고    scopus 로고
    • Abundance and phylogenetic identity of archaeoplankton in the permanent oxygen minimum zone of the eastern tropical South Pacific
    • Belmar, L., Molina, V., and Ulloa, O. (2011) Abundance and phylogenetic identity of archaeoplankton in the permanent oxygen minimum zone of the eastern tropical South Pacific. FEMS Microbiol Ecol 78: 314-326.
    • (2011) FEMS Microbiol Ecol , vol.78 , pp. 314-326
    • Belmar, L.1    Molina, V.2    Ulloa, O.3
  • 8
    • 18844481026 scopus 로고    scopus 로고
    • A marine microbial consortium apparently mediating anaerobic oxidation methane
    • Boetius, A., Ravenschlag, K., Schubert, C.J., Rickert, D., Widdel, F., Gleseke, A., etal. (2000) A marine microbial consortium apparently mediating anaerobic oxidation methane. Nature 407: 623-626.
    • (2000) Nature , vol.407 , pp. 623-626
    • Boetius, A.1    Ravenschlag, K.2    Schubert, C.J.3    Rickert, D.4    Widdel, F.5    Gleseke, A.6
  • 9
    • 0033012303 scopus 로고    scopus 로고
    • Use of antibacterial agents to elucidate the etiology of juvenile oyster disease (JOD) in Crassostrea virginica and numerical dominance of an α- proteobacterium in JOD-affected animals
    • Boettcher, K.J., Barber, B.J., and Singer, J.T. (1999) Use of antibacterial agents to elucidate the etiology of juvenile oyster disease (JOD) in Crassostrea virginica and numerical dominance of an α- proteobacterium in JOD-affected animals. Appl Environ Microbiol 65: 2534-2539.
    • (1999) Appl Environ Microbiol , vol.65 , pp. 2534-2539
    • Boettcher, K.J.1    Barber, B.J.2    Singer, J.T.3
  • 10
    • 79951814095 scopus 로고    scopus 로고
    • Changes in sulfate reducing bacterial populations during the onset of black band disease
    • Bourne, D.G., Muirhead, A., and Sato, Y. (2011) Changes in sulfate reducing bacterial populations during the onset of black band disease. ISME J 5: 559-564.
    • (2011) ISME J , vol.5 , pp. 559-564
    • Bourne, D.G.1    Muirhead, A.2    Sato, Y.3
  • 11
    • 84880441421 scopus 로고    scopus 로고
    • Sulfur-oxidizing bacterial populations within cyanobacterial dominated coral disease lesions
    • Bourne, D.G., van der Zee, M.J.J., Botté, E.S., and Sato, Y. (2013) Sulfur-oxidizing bacterial populations within cyanobacterial dominated coral disease lesions. Environ Microbiol Rep 5: 518-524.
    • (2013) Environ Microbiol Rep , vol.5 , pp. 518-524
    • Bourne, D.G.1    van der Zee, M.J.J.2    Botté, E.S.3    Sato, Y.4
  • 12
    • 79959307333 scopus 로고    scopus 로고
    • Phylogeny and evolution of the Archaea: one hundred genomes later
    • Brochier-Armanet, C., Forterre, P., and Gribaldo, S. (2011) Phylogeny and evolution of the Archaea: one hundred genomes later. Curr Opin Microbiol 14: 274-281.
    • (2011) Curr Opin Microbiol , vol.14 , pp. 274-281
    • Brochier-Armanet, C.1    Forterre, P.2    Gribaldo, S.3
  • 13
    • 0031291264 scopus 로고    scopus 로고
    • Spread of a black-band disease epizootic through the coral reef system in St Ann's Bay, Jamaica
    • Bruckner, A.W., Bruckner, R.J., and Williams, E.H. (1997) Spread of a black-band disease epizootic through the coral reef system in St Ann's Bay, Jamaica. Bull Mar Sci 61: 919-928.
    • (1997) Bull Mar Sci , vol.61 , pp. 919-928
    • Bruckner, A.W.1    Bruckner, R.J.2    Williams, E.H.3
  • 14
    • 33646827488 scopus 로고    scopus 로고
    • The versatile epsilon-proteobacteria: key players in sulphidic habitats
    • Campbell, B.J., Engel, A.S., Porter, M.L., and Takai, K. (2006) The versatile epsilon-proteobacteria: key players in sulphidic habitats. Nat Rev Microbiol 4: 458-468.
    • (2006) Nat Rev Microbiol , vol.4 , pp. 458-468
    • Campbell, B.J.1    Engel, A.S.2    Porter, M.L.3    Takai, K.4
  • 15
    • 0030619210 scopus 로고    scopus 로고
    • Trichodesmium, a globally significant marine cyanobacterium
    • Capone, D.G., Zehr, J.P., Paerl, H.W., Bergman, B., and Carpenter, E.J. (1997) Trichodesmium, a globally significant marine cyanobacterium. Science 276: 1221-1229.
    • (1997) Science , vol.276 , pp. 1221-1229
    • Capone, D.G.1    Zehr, J.P.2    Paerl, H.W.3    Bergman, B.4    Carpenter, E.J.5
  • 17
    • 0028826313 scopus 로고
    • Oxygen and sulfide dynamics in a horizontally migrating cyanobacterial mat - Black band disease of corals
    • Carlton, R.G., and Richardson, L.L. (1995) Oxygen and sulfide dynamics in a horizontally migrating cyanobacterial mat - Black band disease of corals. FEMS Microbiol Ecol 18: 155-162.
    • (1995) FEMS Microbiol Ecol , vol.18 , pp. 155-162
    • Carlton, R.G.1    Richardson, L.L.2
  • 18
    • 84866512649 scopus 로고    scopus 로고
    • Characterization of Roseofilum reptotaenium (Oscillatoriales, Cyanobacteria) gen. et sp. nov. isolated from Caribbean black band disease
    • Casamatta, D., Stanić, D., Gantar, M., and Richardson, L.L. (2012) Characterization of Roseofilum reptotaenium (Oscillatoriales, Cyanobacteria) gen. et sp. nov. isolated from Caribbean black band disease. Phycologia 51: 489-499.
    • (2012) Phycologia , vol.51 , pp. 489-499
    • Casamatta, D.1    Stanić, D.2    Gantar, M.3    Richardson, L.L.4
  • 19
    • 78650295170 scopus 로고    scopus 로고
    • Archaea - timeline of the third domain
    • Cavicchioli, R. (2011) Archaea - timeline of the third domain. Nat Rev Microbiol 9: 51-61.
    • (2011) Nat Rev Microbiol , vol.9 , pp. 51-61
    • Cavicchioli, R.1
  • 20
    • 34548305114 scopus 로고    scopus 로고
    • Benthic nitrogen fixation in the SW New Caledonia lagoon
    • Charpy, L., Alliod, R., Rodier, M., and Golubic, S. (2007) Benthic nitrogen fixation in the SW New Caledonia lagoon. Aquat Microb Ecol 47: 73-81.
    • (2007) Aquat Microb Ecol , vol.47 , pp. 73-81
    • Charpy, L.1    Alliod, R.2    Rodier, M.3    Golubic, S.4
  • 21
    • 0035983607 scopus 로고    scopus 로고
    • Characterization of the bacterial consortium associated with black band disease in coral using molecular microbiological techniques
    • Cooney, R.P., Pantos, O., Tissier, M.D.A., Barer, M.R., O'Donnell, A.G., and Bythell, J.C. (2002) Characterization of the bacterial consortium associated with black band disease in coral using molecular microbiological techniques. Environ Microbiol 4: 401-413.
    • (2002) Environ Microbiol , vol.4 , pp. 401-413
    • Cooney, R.P.1    Pantos, O.2    Tissier, M.D.A.3    Barer, M.R.4    O'Donnell, A.G.5    Bythell, J.C.6
  • 22
    • 0037086196 scopus 로고    scopus 로고
    • Metabolic activity of subsurface life in deep-sea sediments
    • D'Hondt, S., Rutherford, S., and Spivack, A.J. (2002) Metabolic activity of subsurface life in deep-sea sediments. Science 295: 2067-2070.
    • (2002) Science , vol.295 , pp. 2067-2070
    • D'Hondt, S.1    Rutherford, S.2    Spivack, A.J.3
  • 23
    • 37849003820 scopus 로고    scopus 로고
    • Cross-ocean distribution of Rhodobacterales bacteria as primary surface colonizers in temperate coastal marine waters
    • Dang, H., Li, T., Chen, M., and Huang, G. (2008) Cross-ocean distribution of Rhodobacterales bacteria as primary surface colonizers in temperate coastal marine waters. Appl Environ Microbiol 74: 52-60.
    • (2008) Appl Environ Microbiol , vol.74 , pp. 52-60
    • Dang, H.1    Li, T.2    Chen, M.3    Huang, G.4
  • 24
    • 0026755238 scopus 로고
    • Archaea in coastal marine environments
    • DeLong, E.F. (1992) Archaea in coastal marine environments. Proc Natl Acad Sci USA 89: 5685-5689.
    • (1992) Proc Natl Acad Sci USA , vol.89 , pp. 5685-5689
    • DeLong, E.F.1
  • 25
    • 0031769609 scopus 로고    scopus 로고
    • Everything in moderation: archaea as 'non-extremophiles'
    • DeLong, E.F. (1998) Everything in moderation: archaea as 'non-extremophiles'. Curr Opin Genet Dev 8: 649-654.
    • (1998) Curr Opin Genet Dev , vol.8 , pp. 649-654
    • DeLong, E.F.1
  • 26
    • 0032729451 scopus 로고    scopus 로고
    • Visualization and enumeration of marine planktonic archaea and bacteria by using polyribonucleotide probes and fluorescent in situ hybridization
    • DeLong, E.F., Taylor, L.T., Marsh, T.L., and Preston, C.M. (1999) Visualization and enumeration of marine planktonic archaea and bacteria by using polyribonucleotide probes and fluorescent in situ hybridization. Appl Environ Microbiol 65: 5554-5563.
    • (1999) Appl Environ Microbiol , vol.65 , pp. 5554-5563
    • DeLong, E.F.1    Taylor, L.T.2    Marsh, T.L.3    Preston, C.M.4
  • 28
    • 78649719729 scopus 로고    scopus 로고
    • Sediment-associated microdiversity within the Marine Group I Crenarchaeota
    • Durbin, A.M., and Teske, A. (2010) Sediment-associated microdiversity within the Marine Group I Crenarchaeota. Environ Microbiol Rep 2: 693-703.
    • (2010) Environ Microbiol Rep , vol.2 , pp. 693-703
    • Durbin, A.M.1    Teske, A.2
  • 29
    • 77957244650 scopus 로고    scopus 로고
    • Search and clustering orders of magnitude faster than BLAST
    • Edgar, R.C. (2010) Search and clustering orders of magnitude faster than BLAST. Bioinformatics 26: 2460-2461.
    • (2010) Bioinformatics , vol.26 , pp. 2460-2461
    • Edgar, R.C.1
  • 31
    • 0000527957 scopus 로고
    • Extent and effect of black band disease on a Caribbean reef
    • Edmunds, P.J. (1991) Extent and effect of black band disease on a Caribbean reef. Coral Reefs 10: 161-165.
    • (1991) Coral Reefs , vol.10 , pp. 161-165
    • Edmunds, P.J.1
  • 32
    • 0036253488 scopus 로고    scopus 로고
    • Partitioning of bacterial communities between seawater and healthy, black band diseased, and dead coral surfaces
    • Frias-Lopez, J., Zerkle, A.L., Bonheyo, G.T., and Fouke, B.W. (2002) Partitioning of bacterial communities between seawater and healthy, black band diseased, and dead coral surfaces. Appl Environ Microbiol 68: 2214-2228.
    • (2002) Appl Environ Microbiol , vol.68 , pp. 2214-2228
    • Frias-Lopez, J.1    Zerkle, A.L.2    Bonheyo, G.T.3    Fouke, B.W.4
  • 33
    • 78650189470 scopus 로고    scopus 로고
    • Novel primers for 16S rRNA-based archaeal community analyses in environmental samples
    • Gantner, S., Andersson, A.F., Alonso-Saez, L., and Bertilsson, S. (2011) Novel primers for 16S rRNA-based archaeal community analyses in environmental samples. J Microbiol Methods 84: 12-18.
    • (2011) J Microbiol Methods , vol.84 , pp. 12-18
    • Gantner, S.1    Andersson, A.F.2    Alonso-Saez, L.3    Bertilsson, S.4
  • 34
    • 77953211188 scopus 로고    scopus 로고
    • Cyanotoxins are not implicated in the etiology of coral black band disease outbreaks on Pelorus Island, Great Barrier Reef
    • Glas, M.S., Motti, C.A., Negri, A., Sato, Y., Froscio, S., Humpage, A.R., etal. (2010) Cyanotoxins are not implicated in the etiology of coral black band disease outbreaks on Pelorus Island, Great Barrier Reef. FEMS Microbiol Ecol 73: 43-54.
    • (2010) FEMS Microbiol Ecol , vol.73 , pp. 43-54
    • Glas, M.S.1    Motti, C.A.2    Negri, A.3    Sato, Y.4    Froscio, S.5    Humpage, A.R.6
  • 35
    • 84863980613 scopus 로고    scopus 로고
    • Biogeochemical conditions determine virulence of black band disease in corals
    • Glas, M.S., Sato, Y., Ulstrup, K.E., and Bourne, D.G. (2012) Biogeochemical conditions determine virulence of black band disease in corals. ISME J 6: 1526-1534.
    • (2012) ISME J , vol.6 , pp. 1526-1534
    • Glas, M.S.1    Sato, Y.2    Ulstrup, K.E.3    Bourne, D.G.4
  • 38
    • 0028175020 scopus 로고
    • Coexistence of sulfate reduction and methane production in an organic-rich sediment
    • Holmer, M., and Kristensen, E. (1994) Coexistence of sulfate reduction and methane production in an organic-rich sediment. Mar Ecol Prog Ser 107: 177-184.
    • (1994) Mar Ecol Prog Ser , vol.107 , pp. 177-184
    • Holmer, M.1    Kristensen, E.2
  • 39
    • 79957465837 scopus 로고    scopus 로고
    • Bacterial diversity in solenopsis invicta and solenopsis geminata ant colonies characterized by 16S amplicon 454 pyrosequencing
    • Ishak, H.D., Plowes, R., Sen, R., Kellner, K., Meyer, E., Estrada, D.A., etal. (2011) Bacterial diversity in solenopsis invicta and solenopsis geminata ant colonies characterized by 16S amplicon 454 pyrosequencing. Microb Ecol 61: 821-831.
    • (2011) Microb Ecol , vol.61 , pp. 821-831
    • Ishak, H.D.1    Plowes, R.2    Sen, R.3    Kellner, K.4    Meyer, E.5    Estrada, D.A.6
  • 40
    • 33646242506 scopus 로고    scopus 로고
    • Coral disease dynamics in the central Philippines
    • Kaczmarsky, L.T. (2006) Coral disease dynamics in the central Philippines. Dis Aquat Organ 69: 9-21.
    • (2006) Dis Aquat Organ , vol.69 , pp. 9-21
    • Kaczmarsky, L.T.1
  • 41
    • 0035945618 scopus 로고    scopus 로고
    • Archaeal dominance in the mesopelagic zone of the Pacific Ocean
    • Karner, M.B., Delong, E.F., and Karl, D.M. (2001) Archaeal dominance in the mesopelagic zone of the Pacific Ocean. Nature 409: 507-510.
    • (2001) Nature , vol.409 , pp. 507-510
    • Karner, M.B.1    Delong, E.F.2    Karl, D.M.3
  • 42
    • 3042810205 scopus 로고    scopus 로고
    • Tropical Archaea: diversity associated with the surface microlayer of corals
    • Kellogg, C.A. (2004) Tropical Archaea: diversity associated with the surface microlayer of corals. Mar Ecol Prog Ser 273: 81-88.
    • (2004) Mar Ecol Prog Ser , vol.273 , pp. 81-88
    • Kellogg, C.A.1
  • 43
    • 33846452179 scopus 로고    scopus 로고
    • Diversity of Archaea in marine sediments from Skan Bay, Alaska, including cultivated methanogens, and description of Methanogenium boonei sp. nov
    • Kendall, M.M., Wardlaw, G.D., Tang, C.F., Bonin, A.S., Liu, Y., and Valentine, D.L. (2007) Diversity of Archaea in marine sediments from Skan Bay, Alaska, including cultivated methanogens, and description of Methanogenium boonei sp. nov. Appl Environ Microbiol 73: 407-414.
    • (2007) Appl Environ Microbiol , vol.73 , pp. 407-414
    • Kendall, M.M.1    Wardlaw, G.D.2    Tang, C.F.3    Bonin, A.S.4    Liu, Y.5    Valentine, D.L.6
  • 44
    • 70349559191 scopus 로고    scopus 로고
    • Anaerobic oxidation of methane: progress with an unknown process
    • Knittel, K., and Boetius, A. (2009) Anaerobic oxidation of methane: progress with an unknown process. Annu Rev Microbiol 63: 311-334.
    • (2009) Annu Rev Microbiol , vol.63 , pp. 311-334
    • Knittel, K.1    Boetius, A.2
  • 47
    • 77649303058 scopus 로고    scopus 로고
    • Spatial structure and activity of sedimentary microbial communities underlying a Beggiatoa spp. mat in a Gulf of Mexico hydrocarbon seep
    • Lloyd, K.G., Albert, D.B., Biddle, J.F., Chanton, J.P., Pizarro, O., and Teske, A. (2010) Spatial structure and activity of sedimentary microbial communities underlying a Beggiatoa spp. mat in a Gulf of Mexico hydrocarbon seep. PLoS ONE 5: e8738.
    • (2010) PLoS ONE , vol.5
    • Lloyd, K.G.1    Albert, D.B.2    Biddle, J.F.3    Chanton, J.P.4    Pizarro, O.5    Teske, A.6
  • 49
    • 13244299349 scopus 로고    scopus 로고
    • Methanobacterium beijingense sp. nov., a novel methanogen isolated from anaerobic digesters
    • Ma, K., Liu, X., and Dong, X. (2005) Methanobacterium beijingense sp. nov., a novel methanogen isolated from anaerobic digesters. Int J Syst Evol Microbiol 55: 325-329.
    • (2005) Int J Syst Evol Microbiol , vol.55 , pp. 325-329
    • Ma, K.1    Liu, X.2    Dong, X.3
  • 50
    • 0030620440 scopus 로고    scopus 로고
    • Vertical distribution and phylogenetic characterization of marine planktonic Archaea in the Santa Barbara Channel
    • Massana, R., Murray, A.E., Preston, C.M., and DeLong, E.F. (1997) Vertical distribution and phylogenetic characterization of marine planktonic Archaea in the Santa Barbara Channel. Appl Environ Microbiol 63: 50-56.
    • (1997) Appl Environ Microbiol , vol.63 , pp. 50-56
    • Massana, R.1    Murray, A.E.2    Preston, C.M.3    DeLong, E.F.4
  • 51
    • 78650782119 scopus 로고    scopus 로고
    • A meta-analysis of 16S rRNA gene clone libraries from the polymicrobial black band disease of corals
    • Miller, A.W., and Richardson, L.L. (2011) A meta-analysis of 16S rRNA gene clone libraries from the polymicrobial black band disease of corals. FEMS Microbiol Ecol 75: 231-241.
    • (2011) FEMS Microbiol Ecol , vol.75 , pp. 231-241
    • Miller, A.W.1    Richardson, L.L.2
  • 52
    • 77955245722 scopus 로고    scopus 로고
    • First description of giant Archaea (Thaumarchaeota) associated with putative bacterial ectosymbionts in a sulfidic marine habitat
    • Muller, F., Brissac, T., Le Bris, N., Felbeck, H., and Gros, O. (2010) First description of giant Archaea (Thaumarchaeota) associated with putative bacterial ectosymbionts in a sulfidic marine habitat. Environ Microbiol 12: 2371-2383.
    • (2010) Environ Microbiol , vol.12 , pp. 2371-2383
    • Muller, F.1    Brissac, T.2    Le Bris, N.3    Felbeck, H.4    Gros, O.5
  • 53
    • 0036045379 scopus 로고    scopus 로고
    • In vitro demonstration of anaerobic oxidation of methane coupled to sulphate reduction in sediment from a marine gas hydrate area
    • Nauhaus, K., Boetius, A., Kruger, M., and Widdel, F. (2002) In vitro demonstration of anaerobic oxidation of methane coupled to sulphate reduction in sediment from a marine gas hydrate area. Environ Microbiol 4: 296-305.
    • (2002) Environ Microbiol , vol.4 , pp. 296-305
    • Nauhaus, K.1    Boetius, A.2    Kruger, M.3    Widdel, F.4
  • 54
    • 12544250488 scopus 로고    scopus 로고
    • Environmental regulation of the anaerobic oxidation of methane: a comparison of ANME-I and ANME-II communities
    • Nauhaus, K., Treude, T., Boetius, A., and Kruger, M. (2005) Environmental regulation of the anaerobic oxidation of methane: a comparison of ANME-I and ANME-II communities. Environ Microbiol 7: 98-106.
    • (2005) Environ Microbiol , vol.7 , pp. 98-106
    • Nauhaus, K.1    Treude, T.2    Boetius, A.3    Kruger, M.4
  • 55
    • 0038347385 scopus 로고    scopus 로고
    • Archaeal diversity associated with in situ samplers deployed on hydrothermal vents on the East Pacific Rise
    • Nercessian, O., Reysenbach, A.L., Prieur, D., and Jeanthon, C. (2003) Archaeal diversity associated with in situ samplers deployed on hydrothermal vents on the East Pacific Rise. Environ Microbiol 5: 492-502.
    • (2003) Environ Microbiol , vol.5 , pp. 492-502
    • Nercessian, O.1    Reysenbach, A.L.2    Prieur, D.3    Jeanthon, C.4
  • 56
    • 24644498136 scopus 로고    scopus 로고
    • Molecular biogeochemistry of sulfate reduction, methanogenesis and the anaerobic oxidation of methane at Gulf of Mexico cold seeps
    • Orcutt, B., Boetius, A., Elvert, M., Samarkin, V., and Joye, S.B. (2005) Molecular biogeochemistry of sulfate reduction, methanogenesis and the anaerobic oxidation of methane at Gulf of Mexico cold seeps. Geochim Cosmochim Acta 69: 4267-4281.
    • (2005) Geochim Cosmochim Acta , vol.69 , pp. 4267-4281
    • Orcutt, B.1    Boetius, A.2    Elvert, M.3    Samarkin, V.4    Joye, S.B.5
  • 57
    • 41849084119 scopus 로고    scopus 로고
    • On the relationship between methane production and oxidation by anaerobic methanotrophic communities from cold seeps of the Gulf of Mexico
    • Orcutt, B., Samarkin, V., Boetius, A., and Joye, S. (2008) On the relationship between methane production and oxidation by anaerobic methanotrophic communities from cold seeps of the Gulf of Mexico. Environ Microbiol 10: 1108-1117.
    • (2008) Environ Microbiol , vol.10 , pp. 1108-1117
    • Orcutt, B.1    Samarkin, V.2    Boetius, A.3    Joye, S.4
  • 58
    • 0030982247 scopus 로고    scopus 로고
    • A molecular view of microbial diversity and the biosphere
    • Pace, N.R. (1997) A molecular view of microbial diversity and the biosphere. Science 276: 734-740.
    • (1997) Science , vol.276 , pp. 734-740
    • Pace, N.R.1
  • 59
    • 33947243301 scopus 로고    scopus 로고
    • Characterization of the prokaryotic diversity in cold saline perennial springs of the Canadian high arctic
    • Perreault, N.N., Andersen, D.T., Pollard, W.H., Greer, C.W., and Whyte, L.G. (2007) Characterization of the prokaryotic diversity in cold saline perennial springs of the Canadian high arctic. Appl Environ Microbiol 73: 1532-1543.
    • (2007) Appl Environ Microbiol , vol.73 , pp. 1532-1543
    • Perreault, N.N.1    Andersen, D.T.2    Pollard, W.H.3    Greer, C.W.4    Whyte, L.G.5
  • 60
    • 15844365305 scopus 로고    scopus 로고
    • A psychrophilic crenarchaeon inhabits a marine sponge: cenarchaeum symbiosum gen. nov., sp. nov
    • Preston, C.M., Wu, K.Y., Molinski, T.F., and Delong, E.F. (1996) A psychrophilic crenarchaeon inhabits a marine sponge: cenarchaeum symbiosum gen. nov., sp. nov. Proc Natl Acad Sci USA 93: 6241-6246.
    • (1996) Proc Natl Acad Sci USA , vol.93 , pp. 6241-6246
    • Preston, C.M.1    Wu, K.Y.2    Molinski, T.F.3    Delong, E.F.4
  • 61
    • 67649327176 scopus 로고    scopus 로고
    • FastTree: computing large minimum evolution trees with profiles instead of a distance matrix
    • Price, M.N., Dehal, P.S., and Arkin, A.P. (2009) FastTree: computing large minimum evolution trees with profiles instead of a distance matrix. Mol Biol Evol 26: 1641-1650.
    • (2009) Mol Biol Evol , vol.26 , pp. 1641-1650
    • Price, M.N.1    Dehal, P.S.2    Arkin, A.P.3
  • 62
    • 37549027613 scopus 로고    scopus 로고
    • SILVA: a comprehensive online resource for quality checked and aligned ribosomal RNA sequence data compatible with ARB
    • Pruesse, E., Quast, C., Knittel, K., Fuchs, B.M., Ludwig, W., Peplies, J., and Glockner, F.O. (2007) SILVA: a comprehensive online resource for quality checked and aligned ribosomal RNA sequence data compatible with ARB. Nucleic Acids Res 35: 7188-7196.
    • (2007) Nucleic Acids Res , vol.35 , pp. 7188-7196
    • Pruesse, E.1    Quast, C.2    Knittel, K.3    Fuchs, B.M.4    Ludwig, W.5    Peplies, J.6    Glockner, F.O.7
  • 63
    • 70450192669 scopus 로고    scopus 로고
    • Pseudoscillatoria coralii gen. nov., sp. nov., a cyanobacterium associated with coral black band disease (BBD)
    • Rasoulouniriana, D., Siboni, N., Eitan, B.D., Esti, K.W., Loya, Y., and Kushmaro, A. (2009) Pseudoscillatoria coralii gen. nov., sp. nov., a cyanobacterium associated with coral black band disease (BBD). Dis Aquat Organ 87: 91-96.
    • (2009) Dis Aquat Organ , vol.87 , pp. 91-96
    • Rasoulouniriana, D.1    Siboni, N.2    Eitan, B.D.3    Esti, K.W.4    Loya, Y.5    Kushmaro, A.6
  • 64
    • 26244459209 scopus 로고    scopus 로고
    • Black band disease
    • In Rosenberg, E., and Loya, Y. (eds). Heidelberg, Germany: Springer-Verlag
    • Richardson, L.L. (2004) Black band disease. In Coral Health and Disease. Rosenberg, E., and Loya, Y. (eds). Heidelberg, Germany: Springer-Verlag, pp. 325-336.
    • (2004) Coral Health and Disease , pp. 325-336
    • Richardson, L.L.1
  • 66
    • 63849295689 scopus 로고    scopus 로고
    • Diversity and stratification of archaea in a hypersaline microbial mat
    • Robertson, C.E., Spear, J.R., Harris, J.K., and Pace, N.R. (2009) Diversity and stratification of archaea in a hypersaline microbial mat. Appl Environ Microbiol 75: 1801-1810.
    • (2009) Appl Environ Microbiol , vol.75 , pp. 1801-1810
    • Robertson, C.E.1    Spear, J.R.2    Harris, J.K.3    Pace, N.R.4
  • 67
    • 0035347175 scopus 로고    scopus 로고
    • Natural communities of novel archaea and bacteria growing in cold sulfurous prings with a string-of-pearls-like morphology
    • Rudolph, C., Wanner, G., and Huber, R. (2001) Natural communities of novel archaea and bacteria growing in cold sulfurous prings with a string-of-pearls-like morphology. Appl Environ Microbiol 67: 2336-2344.
    • (2001) Appl Environ Microbiol , vol.67 , pp. 2336-2344
    • Rudolph, C.1    Wanner, G.2    Huber, R.3
  • 68
    • 0019911921 scopus 로고
    • Volatile fatty acid cycling in organic-rich marine sediments
    • Sansone, F.J., and Martens, C.S. (1982) Volatile fatty acid cycling in organic-rich marine sediments. Geochim Cosmochim Acta 46: 1575-1589.
    • (1982) Geochim Cosmochim Acta , vol.46 , pp. 1575-1589
    • Sansone, F.J.1    Martens, C.S.2
  • 69
    • 67650872941 scopus 로고    scopus 로고
    • Dynamics of seasonal outbreaks of black band disease in an assemblage of Montipora species at Pelorus Island (Great Barrier Reef, Australia)
    • Sato, Y., Bourne, D.G., and Willis, B.L. (2009) Dynamics of seasonal outbreaks of black band disease in an assemblage of Montipora species at Pelorus Island (Great Barrier Reef, Australia). Proc R Soc B Biol Sci 276: 2795-2803.
    • (2009) Proc R Soc B Biol Sci , vol.276 , pp. 2795-2803
    • Sato, Y.1    Bourne, D.G.2    Willis, B.L.3
  • 70
    • 76349100521 scopus 로고    scopus 로고
    • Successional changes in bacterial communities during the development of black band disease on the reef coral, Montipora hispida
    • Sato, Y., Willis, B.L., and Bourne, D.G. (2010) Successional changes in bacterial communities during the development of black band disease on the reef coral, Montipora hispida. ISME J 4: 203-214.
    • (2010) ISME J , vol.4 , pp. 203-214
    • Sato, Y.1    Willis, B.L.2    Bourne, D.G.3
  • 72
    • 47949111420 scopus 로고    scopus 로고
    • Microbial community composition of black band disease on the coral host Siderastrea siderea from three regions of the wider Caribbean
    • Sekar, R., Kaczmarsky, L.T., and Richardson, L.L. (2008) Microbial community composition of black band disease on the coral host Siderastrea siderea from three regions of the wider Caribbean. Mar Ecol Prog Ser 362: 85-98.
    • (2008) Mar Ecol Prog Ser , vol.362 , pp. 85-98
    • Sekar, R.1    Kaczmarsky, L.T.2    Richardson, L.L.3
  • 73
    • 52949136247 scopus 로고    scopus 로고
    • Global distribution and diversity of coral-associated Archaea and their possible role in the coral holobiont nitrogen cycle
    • Siboni, N., Ben-Dov, E., Sivan, A., and Kushmaro, A. (2008) Global distribution and diversity of coral-associated Archaea and their possible role in the coral holobiont nitrogen cycle. Environ Microbiol 10: 2979-2990.
    • (2008) Environ Microbiol , vol.10 , pp. 2979-2990
    • Siboni, N.1    Ben-Dov, E.2    Sivan, A.3    Kushmaro, A.4
  • 75
    • 0003341851 scopus 로고
    • Development and application of nucleic acid probes in bacterial systematics
    • Stackebrandt, E., and Goodfellow, M. (eds). Chichester, UK: John Wiley and Sons
    • Stahl, D.A., and Amann, R. (1991) Development and application of nucleic acid probes in bacterial systematics. In Development and Application of Nucleic Acid Probes in Bacterial Systematics. Stackebrandt, E., and Goodfellow, M. (eds). Chichester, UK: John Wiley and Sons, pp. 205-248.
    • (1991) Development and Application of Nucleic Acid Probes in Bacterial Systematics , pp. 205-248
    • Stahl, D.A.1    Amann, R.2
  • 76
    • 33646242756 scopus 로고    scopus 로고
    • A single cyanobacterial ribotype is associated with both red and black bands on diseased corals from Palau
    • Sussman, M., Bourne, D.G., and Willis, B.L. (2006) A single cyanobacterial ribotype is associated with both red and black bands on diseased corals from Palau. Dis Aquat Organ 69: 111-118.
    • (2006) Dis Aquat Organ , vol.69 , pp. 111-118
    • Sussman, M.1    Bourne, D.G.2    Willis, B.L.3
  • 77
    • 0033766069 scopus 로고    scopus 로고
    • Rapid detection and quantification of members of the archaeal community by quantitative PCR using fluorogenic probes
    • Takai, K., and Horikoshi, K. (2000) Rapid detection and quantification of members of the archaeal community by quantitative PCR using fluorogenic probes. Appl Environ Microbiol 66: 5066-5072.
    • (2000) Appl Environ Microbiol , vol.66 , pp. 5066-5072
    • Takai, K.1    Horikoshi, K.2
  • 78
    • 33646252018 scopus 로고    scopus 로고
    • Coral diseases near Lee Stocking Island, Bahamas: patterns and potential drivers
    • Voss, J.D., and Richardson, L.L. (2006) Coral diseases near Lee Stocking Island, Bahamas: patterns and potential drivers. Dis Aquat Organ 69: 33-40.
    • (2006) Dis Aquat Organ , vol.69 , pp. 33-40
    • Voss, J.D.1    Richardson, L.L.2
  • 79
    • 77952739182 scopus 로고    scopus 로고
    • Nitrosopumilus maritimus genome reveals unique mechanisms for nitrification and autotrophy in globally distributed marine crenarchaea
    • Walker, C.B., De La Torre, J.R., Klotz, M.G., Urakawa, H., Pinel, N., Arp, D.J., etal. (2010) Nitrosopumilus maritimus genome reveals unique mechanisms for nitrification and autotrophy in globally distributed marine crenarchaea. Proc Natl Acad Sci U S A 107: 8818-8823.
    • (2010) Proc Natl Acad Sci U S A , vol.107 , pp. 8818-8823
    • Walker, C.B.1    De La Torre, J.R.2    Klotz, M.G.3    Urakawa, H.4    Pinel, N.5    Arp, D.J.6
  • 80
    • 33749987038 scopus 로고    scopus 로고
    • Halobacterium jilantaiense sp. nov., a halophilic archaeon isolated from a saline lake in Inner Mongolia, China
    • Yang, Y., Cui, H.L., Zhou, P.J., and Liu, S.J. (2006) Halobacterium jilantaiense sp. nov., a halophilic archaeon isolated from a saline lake in Inner Mongolia, China. Int J Syst Evol Microbiol 56: 2353-2355.
    • (2006) Int J Syst Evol Microbiol , vol.56 , pp. 2353-2355
    • Yang, Y.1    Cui, H.L.2    Zhou, P.J.3    Liu, S.J.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.