메뉴 건너뛰기




Volumn , Issue , 2010, Pages 237-271

In Vitro Screening: Screening by Nuclear Magnetic Resonance

Author keywords

3D structure of therapeutic target making structure based designs impossible; Binding kinetics, highly influential in STD and CSP experiments; Biochemical assays, compounds evaluated based on interactions isolated targets in artificial environment; Chemical Shift Perturbation (CSP) NMR experiment, for studying ligand and protein interactions; High throughput screening (HTS) versatile tools in development of potential drugs targeting protein protein interactions; In vitro screening by nuclear magnetic resonance and high throughput screening methods; NMR, molecular recognition at protein surfaces impact on drug discovery; Protein protein interactions changes in chemical shifts and peaks, corresponding to labeled protein; Saturation Transfer Difference (STD) NMR experiment, studying protein ligand interactions; Signal window (SW), providing measurement of signal magnitude

Indexed keywords


EID: 84886128181     PISSN: None     EISSN: None     Source Type: Book    
DOI: 10.1002/9780470972137.ch9     Document Type: Chapter
Times cited : (1)

References (30)
  • 1
    • 84886170105 scopus 로고    scopus 로고
    • High Throughput Screening: Methods and ProtocolsJanzen, W. P., Ed.;Humana press
    • High Throughput Screening: Methods and ProtocolsJanzen, W. P., Ed.;Humana press, 2002; Vol.190.
    • (2002) , vol.190
  • 2
    • 3142781225 scopus 로고    scopus 로고
    • Small-molecule inhibitors of protein-protein interactions: progressing towards the dream
    • Arkin, M. R.;Wells, J. A. Small-molecule inhibitors of protein-protein interactions: progressing towards the dream. Nat Rev Drug Discov 2004, 3, 301-17.
    • (2004) Nat Rev Drug Discov , vol.3 , pp. 301-17
    • Arkin, M.R.1    Wells, J.A.2
  • 3
    • 0033003760 scopus 로고    scopus 로고
    • ASimple Statistical Parameter for Use in Evaluation and Validation of High Throughput Screening Assays
    • Zhang, J. H.; Chung, T. D.; Oldenburg, K. R. ASimple Statistical Parameter for Use in Evaluation and Validation of High Throughput Screening Assays. J Biomol Screen 1999, 4, 67-73.
    • (1999) J Biomol Screen , vol.4 , pp. 67-73
    • Zhang, J.H.1    Chung, T.D.2    Oldenburg, K.R.3
  • 4
    • 0033863669 scopus 로고    scopus 로고
    • High-throughput screening: new technology for the 21st century
    • Hertzberg, R. P.; Pope, A. J. High-throughput screening: new technology for the 21st century. Curr Opin Chem Biol 2000, 4, 445-51.
    • (2000) Curr Opin Chem Biol , vol.4 , pp. 445-51
    • Hertzberg, R.P.1    Pope, A.J.2
  • 5
    • 0032880709 scopus 로고    scopus 로고
    • Homogeneous fluorescence readouts for miniaturized high-throughput screening: theory and practice.
    • Pope, A. J.; Haupts, U. M.; Moore, K. J. Homogeneous fluorescence readouts for miniaturized high-throughput screening: theory and practice. Drug Discov. Today 1999, 4, 350-62.
    • (1999) Drug Discov.Today , vol.4 , pp. 350-62
    • Pope, A.J.1    Haupts, U.M.2    Moore, K.J.3
  • 6
    • 33845301393 scopus 로고    scopus 로고
    • Identification of small-molecule inhibitors of RGS4 using a high-throughput flow cytometry protein interaction assay
    • Roman, D. L.; Talbot, J. N.; Roof, R. A.; Sunahara, R. K.; Traynor, J. R.; Neubig, R. R. Identification of small-molecule inhibitors of RGS4 using a high-throughput flow cytometry protein interaction assay. Mol Pharmacol 2007, 71, 169-75.
    • (2007) Mol Pharmacol , vol.71 , pp. 169-75
    • Roman, D.L.1    Talbot, J.N.2    Roof, R.A.3    Sunahara, R.K.4    Traynor, J.R.5    Neubig, R.R.6
  • 7
    • 20444374044 scopus 로고    scopus 로고
    • Highthroughput screening with HyperCyt flow cytometry to detect small molecule formylpeptide receptor ligands
    • Young, S. M.; Bologa, C.; Prossnitz, E. R.; Oprea, T. I.; Sklar, L. A.; Edwards, B. S. Highthroughput screening with HyperCyt flow cytometry to detect small molecule formylpeptide receptor ligands. J Biomol Screen 2005, 10, 374-82.
    • (2005) J Biomol Screen , vol.10 , pp. 374-82
    • Young, S.M.1    Bologa, C.2    Prossnitz, E.R.3    Oprea, T.I.4    Sklar, L.A.5    Edwards, B.S.6
  • 8
    • 11144265736 scopus 로고    scopus 로고
    • AGeneral Framework for Development and Data Analysis of Competitive High-Throughput Screens for Small-Molecule Inhibitors of Protein-protein Interactions by Fluorescence Polarization
    • Roehrl, M. A.;Wang, J.Y.;Wagner,G.AGeneral Framework for Development and Data Analysis of Competitive High-Throughput Screens for Small-Molecule Inhibitors of Protein-protein Interactions by Fluorescence Polarization. Biochemistry 2004, 43, 16056-66.
    • (2004) Biochemistry , vol.43 , pp. 16056-66
    • Roehrl, M.A.1    Wang, J.Y.2    Wagner, G.3
  • 10
    • 0036667918 scopus 로고    scopus 로고
    • Development of a highthroughput fluorescence polarization assay for Bcl-xL.
    • Zhang, H.; Nimmer, P.; Rosenberg, S. H.; Ng, S. C.; Joseph, M. Development of a highthroughput fluorescence polarization assay for Bcl-xL. Anal. Biochem. 2002, 307, 70-5.
    • (2002) Anal.Biochem , vol.307 , pp. 70-5
    • Zhang, H.1    Nimmer, P.2    Rosenberg, S.H.3    Ng, S.C.4    Joseph, M.5
  • 11
    • 0344493928 scopus 로고    scopus 로고
    • Development of a fluorescence polarization assay to screen for inhibitors of the FtsZ/ZipA interaction
    • Kenny, C. H.; Ding,W.; Kelleher, K.; et al. Development of a fluorescence polarization assay to screen for inhibitors of the FtsZ/ZipA interaction. Anal. Biochem. 2003, 323, 224-33.
    • (2003) Anal.Biochem , vol.323 , pp. 224-33
    • Kenny, C.H.1    Ding, W.2    Kelleher, K.3
  • 12
    • 11144347825 scopus 로고    scopus 로고
    • Discovery of small-molecule inhibitors of the NFAT- calcineurin interaction by competitive high-throughput fluorescence polarization screening
    • Roehrl, M. H.; Wang, J. Y.; Wagner, G. Discovery of small-molecule inhibitors of the NFAT- calcineurin interaction by competitive high-throughput fluorescence polarization screening. Biochemistry 2004, 43, 16067-75.
    • (2004) Biochemistry , vol.43 , pp. 16067-75
    • Roehrl, M.H.1    Wang, J.Y.2    Wagner, G.3
  • 13
    • 7444262377 scopus 로고    scopus 로고
    • Development and optimization of a binding assay for the XIAP BIR3 domain using fluorescence polarization.
    • Nikolovska-Coleska, Z.; Wang, R.; Fang, X.; et al. Development and optimization of a binding assay for the XIAP BIR3 domain using fluorescence polarization. Anal Biochem. 2004, 332, 261-73.
    • (2004) Anal Biochem , vol.332 , pp. 261-73
    • Nikolovska-Coleska, Z.1    Wang, R.2    Fang, X.3
  • 14
    • 30044433051 scopus 로고    scopus 로고
    • Discovery of small molecule inhibitors of the interaction of the thyroid hormone receptor with transcriptional coregulators
    • Arnold, L. A.; Estebanez-Perpina, E.; Togashi, M.; et al. Discovery of small molecule inhibitors of the interaction of the thyroid hormone receptor with transcriptional coregulators. J Biol Chem 2005, 280, 43048-55.
    • (2005) J Biol Chem , vol.280 , pp. 43048-55
    • Arnold, L.A.1    Estebanez-Perpina, E.2    Togashi, M.3
  • 15
    • 33845524054 scopus 로고    scopus 로고
    • Assay Principle for Modulators of Protein-protein Interactions and Its Application to Non-ATP-Competitive Ligands Targeting Protein Kinase A.
    • Saldanha, S. A.; Kaler, G.; Cottam, H. B.; Abagyan, R.; Taylor, S. S. Assay Principle for Modulators of Protein-protein Interactions and Its Application to Non-ATP-Competitive Ligands Targeting Protein Kinase A. Anal. Chem. 2006, 78, 8265-72.
    • (2006) Anal. Chem , vol.78 , pp. 8265-72
    • Saldanha, S.A.1    Kaler, G.2    Cottam, H.B.3    Abagyan, R.4    Taylor, S.S.5
  • 16
    • 0037133575 scopus 로고    scopus 로고
    • Small-molecule antagonists of Myc/Max dimerization inhibit Myc-induced transformation of chicken embryo fibroblasts
    • Berg, T.; Cohen, S. B.; Desharnais, J.; et al. Small-molecule antagonists of Myc/Max dimerization inhibit Myc-induced transformation of chicken embryo fibroblasts. Proc Natl Acad Sci U S A 2002, 99, 3830-5.
    • (2002) Proc Natl Acad Sci U S A , vol.99 , pp. 3830-5
    • Berg, T.1    Cohen, S.B.2    Desharnais, J.3
  • 17
    • 0344837844 scopus 로고    scopus 로고
    • Luminescence resonance energy transfer-based highthroughput screening assay for inhibitors of essential protein-protein interactions in bacterial RNA polymerase
    • Bergendahl, V.; Heyduk, T.; Burgess, R. R. Luminescence resonance energy transfer-based highthroughput screening assay for inhibitors of essential protein-protein interactions in bacterial RNA polymerase. Appl Environ Microbiol 2003, 69, 1492-8.
    • (2003) Appl Environ Microbiol , vol.69 , pp. 1492-8
    • Bergendahl, V.1    Heyduk, T.2    Burgess, R.R.3
  • 18
    • 0142195778 scopus 로고    scopus 로고
    • High-throughput methods to detect dimerization of Bcl-2 family proteins.
    • Whitfield, J.; Harada, K.; Bardelle, C.; Staddon, J. M. High-throughput methods to detect dimerization of Bcl-2 family proteins. Anal. Biochem. 2003, 322, 170-8.
    • (2003) Anal.Biochem , vol.322 , pp. 170-8
    • Whitfield, J.1    Harada, K.2    Bardelle, C.3    Staddon, J.M.4
  • 19
    • 1642512639 scopus 로고    scopus 로고
    • Small-molecule antagonists of the oncogenic Tcf/b-catenin protein complex
    • Lepourcelet, M.; Chen, Y. P.; France, D. S.; et al. Small-molecule antagonists of the oncogenic Tcf/b-catenin protein complex. Cancer Cell 2004, 5, 91-102.
    • (2004) Cancer Cell , vol.5 , pp. 91-102
    • Lepourcelet, M.1    Chen, Y.P.2    France, D.S.3
  • 21
    • 0033571626 scopus 로고    scopus 로고
    • Cutting edge: a small molecule antagonist of LFA-1-mediated cell adhesion
    • Kelly, T. A.; Jeanfavre, D. D.; McNeil, D.W.; et al. Cutting edge: a small molecule antagonist of LFA-1-mediated cell adhesion. J Immunol 1999, 163, 5173-7.
    • (1999) J Immunol , vol.163 , pp. 5173-7
    • Kelly, T.A.1    Jeanfavre, D.D.2    McNeil, D.W.3
  • 22
    • 33750595486 scopus 로고    scopus 로고
    • Label-free detection methods for protein microarrays
    • Yu, X.; Xu, D.; Cheng, Q. Label-free detection methods for protein microarrays. Proteomics 2006, 6, 5493-5503.
    • (2006) Proteomics , vol.6 , pp. 5493-5503
    • Yu, X.1    Xu, D.2    Cheng, Q.3
  • 23
    • 28444469838 scopus 로고    scopus 로고
    • Surface plasmon resonance imaging-based protein arrays for high-throughput screening of protein-protein interaction inhibitors
    • Jung, S. O.; Ro, H. S.; Kho, B. H.; Shin, Y. B.; Kim, M. G.; Chung, B. H. Surface plasmon resonance imaging-based protein arrays for high-throughput screening of protein-protein interaction inhibitors. Proteomics 2005, 5, 4427-31.
    • (2005) Proteomics , vol.5 , pp. 4427-31
    • Jung, S.O.1    Ro, H.S.2    Kho, B.H.3    Shin, Y.B.4    Kim, M.G.5    Chung, B.H.6
  • 24
    • 33846862630 scopus 로고    scopus 로고
    • A Simple Cell-Based HTS Assay System to Screen for Inhibitors of p53-Hdm2 Protein-protein Interactions
    • Lundholt, B. K.; Heydorn, A.; Bjorn, S. P.; Praestegaard, M. A Simple Cell-Based HTS Assay System to Screen for Inhibitors of p53-Hdm2 Protein-protein Interactions. Assay Drug Develop. Tech. 2006, 4, 679-88.
    • (2006) Assay Drug Develop. Tech. , vol.4 , pp. 679-88
    • Lundholt, B.K.1    Heydorn, A.2    Bjorn, S.P.3    Praestegaard, M.4
  • 25
    • 34147210060 scopus 로고    scopus 로고
    • Bioluminescent assays for high-throughput screening
    • Fan, F.; Wood, K. V. Bioluminescent assays for high-throughput screening. Assay Drug Dev Technol 2007, 5, 127-36.
    • (2007) Assay Drug Dev Technol , vol.5 , pp. 127-36
    • Fan, F.1    Wood, K.V.2
  • 26
    • 24144436923 scopus 로고    scopus 로고
    • Evaluation of the InteraX system technology in a high-throughput screening environment
    • Buttner, F. H.; Kumpf, R.; Menzel, S.; Reulle, D.; Valler, M. J. Evaluation of the InteraX system technology in a high-throughput screening environment. J Biomol Screen 2005, 10, 485-94.
    • (2005) J Biomol Screen , vol.10 , pp. 485-94
    • Buttner, F.H.1    Kumpf, R.2    Menzel, S.3    Reulle, D.4    Valler, M.J.5
  • 27
    • 0035675336 scopus 로고    scopus 로고
    • Application of beta-galactosidase enzyme complementation technology as a high throughput screening format for antagonists of the epidermal growth factor receptor
    • Graham, D. L.; Bevan, N.; Lowe, P. N.; Palmer, M.; Rees, S. Application of beta-galactosidase enzyme complementation technology as a high throughput screening format for antagonists of the epidermal growth factor receptor. J Biomol Screen 2001, 6, 401-11.
    • (2001) J Biomol Screen , vol.6 , pp. 401-11
    • Graham, D.L.1    Bevan, N.2    Lowe, P.N.3    Palmer, M.4    Rees, S.5
  • 28
    • 0141656722 scopus 로고    scopus 로고
    • Cell-based high-throughput screening assay system for monitoring G protein-coupled receptor activation using beta-galactosidase enzyme complementation technology
    • Yan,Y. X.; Boldt-Houle, D. M.; Tillotson, B. P.; et al. Cell-based high-throughput screening assay system for monitoring G protein-coupled receptor activation using beta-galactosidase enzyme complementation technology. J Biomol Screen 2002, 7, 451-9.
    • (2002) J Biomol Screen , vol.7 , pp. 451-9
    • Yan, Y.X.1    Boldt-Houle, D.M.2    Tillotson, B.P.3
  • 29
    • 2442705551 scopus 로고    scopus 로고
    • A mammalian genetic system to screen for small molecules capable of disrupting protein-protein interactions
    • Zhao, H. F.; Kiyota, T.; Chowdhury, S.; et al. A mammalian genetic system to screen for small molecules capable of disrupting protein-protein interactions. Anal Chem 2004, 76, 2922-7.
    • (2004) Anal Chem , vol.76 , pp. 2922-7
    • Zhao, H.F.1    Kiyota, T.2    Chowdhury, S.3
  • 30
    • 0031789088 scopus 로고    scopus 로고
    • Identification of a calcium channel modulator using a high throughput yeast two-hybrid screen.
    • Young, K.; Lin, S.; Sun, L.; et al. Identification of a calcium channel modulator using a high throughput yeast two-hybrid screen. Nature Biotech. 1998, 16, 946-50.
    • (1998) Nature Biotech , vol.16 , pp. 946-50
    • Young, K.1    Lin, S.2    Sun, L.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.