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Volumn 443, Issue 2, 2013, Pages 214-221

A liquid chromatography/mass spectrometry-based generic detection method for biochemical assay and hit discovery of histone methyltransferases

Author keywords

Assay; Histone; LC MS; Methyltransferase; S Adenosyl homocysteine

Indexed keywords

ALKYLATION; ASSAYS; PROTEINS; SPECTROMETRY;

EID: 84885983109     PISSN: 00032697     EISSN: 10960309     Source Type: Journal    
DOI: 10.1016/j.ab.2013.08.029     Document Type: Article
Times cited : (12)

References (30)
  • 2
    • 85084687187 scopus 로고    scopus 로고
    • Genentech and constellation forge epigenetics agreement
    • 10.1021/cen-09004-notw7
    • L. Jarvis Genentech and constellation forge epigenetics agreement Chem. Eng. News 90 4 2012 7 10.1021/cen-09004-notw7
    • (2012) Chem. Eng. News , vol.90 , Issue.4 , pp. 7
    • Jarvis, L.1
  • 3
    • 84862635654 scopus 로고    scopus 로고
    • Genetic events that shape the cancer epigenome
    • R.J. Ryan, and B.E. Bernstein Genetic events that shape the cancer epigenome Science 336 2012 1513 1514
    • (2012) Science , vol.336 , pp. 1513-1514
    • Ryan, R.J.1    Bernstein, B.E.2
  • 5
    • 84862904622 scopus 로고    scopus 로고
    • BIX-01294 treatment blocks cell proliferation, migration, and contractility in ovine foetal pulmonary arterial smooth muscle cells
    • Q. Yang, Z. Lu, D. Singh, and J.U. Raj BIX-01294 treatment blocks cell proliferation, migration, and contractility in ovine foetal pulmonary arterial smooth muscle cells Cell Prolif. 45 2012 335 344
    • (2012) Cell Prolif. , vol.45 , pp. 335-344
    • Yang, Q.1    Lu, Z.2    Singh, D.3    Raj, J.U.4
  • 7
    • 84859747269 scopus 로고    scopus 로고
    • G9a/GLP histone lysine dimethyltransferase complex activity in the hippocampus and the entorhinal cortex is required for gene activation and silencing during memory consolidation
    • S. Gupta-Agarwal, A.V. Franklin, T. Deramus, M. Wheelock, R.L. Davis, L.L. McMahon, and F.D. Lubin G9a/GLP histone lysine dimethyltransferase complex activity in the hippocampus and the entorhinal cortex is required for gene activation and silencing during memory consolidation J. Neurosci. 32 2012 5440 5453
    • (2012) J. Neurosci. , vol.32 , pp. 5440-5453
    • Gupta-Agarwal, S.1    Franklin, A.V.2    Deramus, T.3    Wheelock, M.4    Davis, R.L.5    McMahon, L.L.6    Lubin, F.D.7
  • 9
    • 84864876023 scopus 로고    scopus 로고
    • Inner workings and regulatory inputs that control Polycomb repressive complex 2
    • M.M. O'Meara, and J.A. Simon Inner workings and regulatory inputs that control Polycomb repressive complex 2 Chromosoma 121 2012 221 234
    • (2012) Chromosoma , vol.121 , pp. 221-234
    • O'Meara, M.M.1    Simon, J.A.2
  • 13
    • 84861174704 scopus 로고    scopus 로고
    • Quantitative assessment of chromatin immunoprecipitation grade antibodies directed against histone modifications reveals patterns of co-occurring marks on histone protein molecules
    • S.E. Peach, E.L. Rudomin, N.D. Udeshi, S.A. Carr, and J.D. Jaffe Quantitative assessment of chromatin immunoprecipitation grade antibodies directed against histone modifications reveals patterns of co-occurring marks on histone protein molecules Mol. Cell. Proteomics 11 2012 128 137
    • (2012) Mol. Cell. Proteomics , vol.11 , pp. 128-137
    • Peach, S.E.1    Rudomin, E.L.2    Udeshi, N.D.3    Carr, S.A.4    Jaffe, J.D.5
  • 14
    • 2642512251 scopus 로고    scopus 로고
    • On-line coupling of high-performance liquid chromatography to a continuous-flow enzyme assay based on electrospray ionization mass
    • DOI 10.1021/ac035380w
    • A.R. de Boer, T. Letzel, D.A. van Elswijk, H. Lingeman, W.M. Niessen, and H. Irth On-line coupling of high-performance liquid chromatography to a continuous-flow enzyme assay based on electrospray ionization mass spectrometry Anal. Chem. 76 2004 3155 3161 (Pubitemid 38715709)
    • (2004) Analytical Chemistry , vol.76 , Issue.11 , pp. 3155-3161
    • De Boer, A.R.1    Letzel, T.2    Van Elswijk, D.A.3    Lingeman, H.4    Niessen, W.M.A.5    Irth, H.6
  • 15
    • 32844454603 scopus 로고    scopus 로고
    • Histone demethylation by a family of JmjC domain-containing proteins
    • DOI 10.1038/nature04433, PII NATURE04433
    • Y. Tsukada, J. Fang, H. Erdjument-Bromage, M.E. Warren, C.H. Borchers, P. Tempst, and Y. Zhang Histone demethylation by a family of JmjC domain-containing proteins Nature 439 2006 811 816 (Pubitemid 43255695)
    • (2006) Nature , vol.439 , Issue.7078 , pp. 811-816
    • Tsukada, Y.-I.1    Fang, J.2    Erdjument-Bromage, H.3    Warren, M.E.4    Borchers, C.H.5    Tempst, P.6    Zhang, Y.7
  • 16
    • 0035694922 scopus 로고    scopus 로고
    • Purification and functional characterization of a histone H3-lysine 4-specific methyltransferase
    • DOI 10.1016/S1097-2765(01)00405-1
    • H. Wang, R. Cao, L. Xia, H. Erdjument-Bromage, C. Borchers, P. Tempst, and Y. Zhang Purification and functional characterization of a histone H3-lysine 4-specific methyltransferase Mol. Cell 8 2001 1207 1217 (Pubitemid 34084993)
    • (2001) Molecular Cell , vol.8 , Issue.6 , pp. 1207-1217
    • Wang, H.1    Cao, R.2    Xia, L.3    Erdjument-Bromage, H.4    Borchers, C.5    Tempst, P.6    Zhang, Y.7
  • 17
    • 11144332565 scopus 로고    scopus 로고
    • Histone demethylation mediated by the nuclear amine oxidase homolog LSD1
    • DOI 10.1016/j.cell.2004.12.012, PII S0092867404011997
    • Y. Shi, F. Lan, C. Matson, P. Mulligan, J.R. Whetstine, P.A. Cole, R.A. Casero, and Y. Shi Histone demethylation mediated by the nuclear amine oxidase homolog LSD1 Cell 119 2004 941 953 (Pubitemid 40037608)
    • (2004) Cell , vol.119 , Issue.7 , pp. 941-953
    • Shi, Y.1    Lan, F.2    Matson, C.3    Mulligan, P.4    Whetstine, J.R.5    Cole, P.A.6    Casero, R.A.7    Shi, Y.8
  • 18
    • 0037172665 scopus 로고    scopus 로고
    • Methylation of H3-lysine 79 is mediated by a new family of HMTases without a SET domain
    • DOI 10.1016/S0960-9822(02)00901-6, PII S0960982202009016
    • Q. Feng, H. Wang, H.H. Ng, H. Erdjument-Bromage, P. Tempst, K. Struhl, and Y. Zhang Methylation of H3-lysine 79 is mediated by a new family of HMTases without a SET domain Curr. Biol. 12 2002 1052 1058 (Pubitemid 34703339)
    • (2002) Current Biology , vol.12 , Issue.12 , pp. 1052-1058
    • Feng, Q.1    Wang, H.2    Ng, H.H.3    Erdjument-Bromage, H.4    Tempst, P.5    Struhl, K.6    Zhang, Y.7
  • 19
    • 84863011070 scopus 로고    scopus 로고
    • Scintillation proximity assay of arginine methylation
    • J. Wu, N. Xie, Y. Feng, and Y.G. Zheng Scintillation proximity assay of arginine methylation J. Biomol. Screen. 17 2012 237 244
    • (2012) J. Biomol. Screen. , vol.17 , pp. 237-244
    • Wu, J.1    Xie, N.2    Feng, Y.3    Zheng, Y.G.4
  • 21
    • 0033557832 scopus 로고    scopus 로고
    • Development of a scintillation proximity assay for histone deacetylase using a biotinylated peptide derived from histone-H4
    • DOI 10.1006/abio.1998.3038
    • B. Nare, J.J. Allocco, R. Kuningas, S. Galuska, R.W. Myers, M.A. Bednarek, and D.M. Schmatz Development of a scintillation proximity assay for histone deacetylase using a biotinylated peptide derived from histone-H4 Anal. Biochem. 267 1999 390 396 (Pubitemid 29095888)
    • (1999) Analytical Biochemistry , vol.267 , Issue.2 , pp. 390-396
    • Nare, B.1    Allocco, J.J.2    Kuningas, R.3    Galuska, S.4    Myers, R.W.5    Bednarek, M.A.6    Schmatz, D.M.7
  • 22
    • 51149107449 scopus 로고    scopus 로고
    • Scintillation proximity assays in high-throughput screening
    • J.F. Glickman, A. Schmid, and S. Ferrand Scintillation proximity assays in high-throughput screening Assay Drug Dev. Technol. 6 2008 433 455
    • (2008) Assay Drug Dev. Technol. , vol.6 , pp. 433-455
    • Glickman, J.F.1    Schmid, A.2    Ferrand, S.3
  • 24
    • 80054085409 scopus 로고    scopus 로고
    • Screening for lysine-specific demethylase-1 inhibitors using a label-free high-throughput mass spectrometry assay
    • M. Plant, T. Dineen, A. Cheng, A.M. Long, H. Chen, and K.A. Morgenstern Screening for lysine-specific demethylase-1 inhibitors using a label-free high-throughput mass spectrometry assay Anal. Biochem. 419 2011 217 227
    • (2011) Anal. Biochem. , vol.419 , pp. 217-227
    • Plant, M.1    Dineen, T.2    Cheng, A.3    Long, A.M.4    Chen, H.5    Morgenstern, K.A.6
  • 26
    • 84865214603 scopus 로고    scopus 로고
    • Full utilization of a mass spectrometer using on-demand sharing with multiple LC units
    • S. Li, Q. Hao, J. Gounarides, and Y.K. Wang Full utilization of a mass spectrometer using on-demand sharing with multiple LC units J. Mass Spectrom. 47 2012 1074 1082
    • (2012) J. Mass Spectrom. , vol.47 , pp. 1074-1082
    • Li, S.1    Hao, Q.2    Gounarides, J.3    Wang, Y.K.4
  • 27
    • 72049117400 scopus 로고    scopus 로고
    • Simultaneous quantification of S-adenosyl methionine and S-adenosyl homocysteine in human plasma by stable-isotope dilution ultra performance liquid chromatography tandem mass spectrometry
    • S.H. Kirsch, J.P. Knapp, J. Geisel, W. Herrmann, and R. Obeid Simultaneous quantification of S-adenosyl methionine and S-adenosyl homocysteine in human plasma by stable-isotope dilution ultra performance liquid chromatography tandem mass spectrometry J. Chromatogr. B 877 2009 3865 3870
    • (2009) J. Chromatogr. B , vol.877 , pp. 3865-3870
    • Kirsch, S.H.1    Knapp, J.P.2    Geisel, J.3    Herrmann, W.4    Obeid, R.5
  • 30
    • 0033003760 scopus 로고    scopus 로고
    • A simple statistical parameter for use in evaluation and validation of high throughput screening assays
    • DOI 10.1177/108705719900400206
    • J.H. Zhang, T.D. Chung, and K.R. Oldenburg A simple statistical parameter for use in evaluation and validation of high throughput screening assays J. Biomol. Screen. 4 1999 67 73 (Pubitemid 29278954)
    • (1999) Journal of Biomolecular Screening , vol.4 , Issue.2 , pp. 67-73
    • Zhang, J.-H.1    Chung, T.D.Y.2    Oldenburg, K.R.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.