-
1
-
-
79958165589
-
De novo genome sequencing and comparative genomics of the date palm (Phoenix dactylifera)
-
Al-Dous EK, George B, Al-Mahmoud ME, et al. 2011. De novo genome sequencing and comparative genomics of the date palm (Phoenix dactylifera). Nature Biotechnology 29: 521-527.
-
(2011)
Nature Biotechnology
, vol.29
, pp. 521-527
-
-
Al-Dous, E.K.1
George, B.2
Al-Mahmoud, M.E.3
-
2
-
-
0025183708
-
Basic local alignment search tool
-
Altschul SF, Gish W, Miller W, Myers EW, Lipman DJ. 1990. Basic local alignment search tool. Journal of Molecular Biology 215: 403-410.
-
(1990)
Journal of Molecular Biology
, vol.215
, pp. 403-410
-
-
Altschul, S.F.1
Gish, W.2
Miller, W.3
Myers, E.W.4
Lipman, D.J.5
-
3
-
-
73649140264
-
Exceptional diversity, nonrandom distribution, and rapid evolution of retroelements in the B73 maize genome
-
Baucom RS, Estill JC, Chaparro C, et al. 2009. Exceptional diversity, nonrandom distribution, and rapid evolution of retroelements in the B73 maize genome. PLoS Genetics 5: Pe1000732.
-
(2009)
PLoS Genetics
, vol.5
-
-
Baucom, R.S.1
Estill, J.C.2
Chaparro, C.3
-
4
-
-
0033869323
-
Comparative sequence analysis of plant nuclear genomes: Microcollinearity and its many exceptions
-
Bennetzen JL. 2000. Comparative sequence analysis of plant nuclear genomes: Microcollinearity and its many exceptions. The Plant Cell 12: 1021-1029.
-
(2000)
The Plant Cell
, vol.12
, pp. 1021-1029
-
-
Bennetzen, J.L.1
-
5
-
-
6044226955
-
Consistent over-estimation of gene number in complex plant genomes
-
Bennetzen JL, Coleman C, Liu R, Ma J, Ramakrishna W. 2004. Consistent over-estimation of gene number in complex plant genomes. Current Opinion in Plant Biology 7: 732-736.
-
(2004)
Current Opinion in Plant Biology
, vol.7
, pp. 732-736
-
-
Bennetzen, J.L.1
Coleman, C.2
Liu, R.3
Ma, J.4
Ramakrishna, W.5
-
6
-
-
84864696893
-
The banana (Musa acuminata) genome and the evolution of monocotyledonous plants
-
D'Hont A, Denoeud F, Aury JM, et al. 2012. The banana (Musa acuminata) genome and the evolution of monocotyledonous plants. Nature 488: 213-217.
-
(2012)
Nature
, vol.488
, pp. 213-217
-
-
D'Hont, A.1
Denoeud, F.2
Aury, J.M.3
-
7
-
-
0346789057
-
Genomic organization of a novel root alliinase gene, ALL1, in onion
-
Do S, Suzuki G, Mukai Y. 2003. Genomic organization of a novel root alliinase gene, ALL1, in onion. Gene 325: 17-24.
-
(2003)
Gene
, vol.325
, pp. 17-24
-
-
Do, S.1
Suzuki, G.2
Mukai, Y.3
-
8
-
-
79955124012
-
Epigenetic modifications in plants: An evolutionary perspective
-
Feng S, Jacobsen SE. 2011. Epigenetic modifications in plants: An evolutionary perspective. Current Opinion in Plant Biology 14: 179-186.
-
(2011)
Current Opinion in Plant Biology
, vol.14
, pp. 179-186
-
-
Feng, S.1
Jacobsen, S.E.2
-
9
-
-
33751245887
-
Comparative sequence and genetic analyses of asparagus BACs reveal no microsynteny with onion or rice
-
Jakše J, Telgmann A, Jung C, et al. 2006. Comparative sequence and genetic analyses of asparagus BACs reveal no microsynteny with onion or rice. Theoretical and Applied Genetics 114: 31-39.
-
(2006)
Theoretical and Applied Genetics
, vol.114
, pp. 31-39
-
-
Jakše, J.1
Telgmann, A.2
Jung, C.3
-
10
-
-
51349085817
-
Pilot sequencing of onion genomic DNA reveals fragments of transposable elements, low gene densities, and significant gene enrichment after methyl filtration
-
Jakše J, Meyer JD, Suzuki G, et al. 2008. Pilot sequencing of onion genomic DNA reveals fragments of transposable elements, low gene densities, and significant gene enrichment after methyl filtration. Molecular Genetics and Genomics 280: 287-292.
-
(2008)
Molecular Genetics and Genomics
, vol.280
, pp. 287-292
-
-
Jakše, J.1
Meyer, J.D.2
Suzuki, G.3
-
11
-
-
11144300927
-
The age of major monocot groups in- ferred from 800+rbcL sequences
-
Jansson T, Bremer K. 2005. The age of major monocot groups in- ferred from 800+rbcL sequences. Botanical Journal of the Linnean Society 146: 395-398.
-
(2005)
Botanical Journal of the Linnean Society
, vol.146
, pp. 395-398
-
-
Jansson, T.1
Bremer, K.2
-
12
-
-
4944239027
-
Pack-MULE transposable elements mediate gene evolution in plants
-
Jiang N, Bao Z, Zhang X, Eddy SR, Wessler SR. 2004. Pack-MULE transposable elements mediate gene evolution in plants. Nature 431: 569-573.
-
(2004)
Nature
, vol.431
, pp. 569-573
-
-
Jiang, N.1
Bao, Z.2
Zhang, X.3
Eddy, S.R.4
Wessler, S.R.5
-
13
-
-
0028485954
-
Integration and nonrandom mutation of a plasma membrane proton ATPase gene fragment within the Bs1 retroelement of maize
-
Jin YK, Bennetzen JL. 1994. Integration and nonrandom mutation of a plasma membrane proton ATPase gene fragment within the Bs1 retroelement of maize. The Plant Cell 6: 1177-1186.
-
(1994)
The Plant Cell
, vol.6
, pp. 1177-1186
-
-
Jin, Y.K.1
Bennetzen, J.L.2
-
14
-
-
0019296687
-
Asimple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences
-
Kimura M. 1980.Asimple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. Journal of Molecular Evolution 16: 111-120.
-
(1980)
Journal of Molecular Evolution
, vol.16
, pp. 111-120
-
-
Kimura, M.1
-
15
-
-
10744220149
-
Aunique set of 11, 008 onion expressed sequence tags reveals expressed sequence and genomic differences between the monocot orders Asparagales and Poales
-
Kuhl JC, CheungF, YuanQ, et al. 2004.Aunique set of 11, 008 onion expressed sequence tags reveals expressed sequence and genomic differences between the monocot orders Asparagales and Poales. The Plant Cell 16: 114-125.
-
(2004)
The Plant Cell
, vol.16
, pp. 114-125
-
-
Kuhl, J.C.1
Cheung, F.2
Yuan, Q.3
-
16
-
-
33645802408
-
Comparative genomic analyses in Asparagus
-
Kuhl JC, Havey MJ, Martin WJ, et al. 2005. Comparative genomic analyses in Asparagus. Genome 48: 1052-1060.
-
(2005)
Genome
, vol.48
, pp. 1052-1060
-
-
Kuhl, J.C.1
Havey, M.J.2
Martin, W.J.3
-
17
-
-
21144454436
-
Gene movement by Helitron transposons contributes to the haplotype variability of maize
-
Lai J, LiY, Messing J, Dooner HK. 2005. Gene movement by Helitron transposons contributes to the haplotype variability of maize. Proceedings of the National Academy of Sciences, USA 102: 9068-9073.
-
(2005)
Proceedings of the National Academy of Sciences, USA
, vol.102
, pp. 9068-9073
-
-
Lai, J.1
Li, Y.2
Messing, J.3
Dooner, H.K.4
-
20
-
-
0037433054
-
LTR-STRUC: A novel search and identification program for LTR retrotransposons
-
McCarthy EM, McDonald JF. 2003. LTR-STRUC: A novel search and identification program for LTR retrotransposons. Bioinformatics 19: 362-367.
-
(2003)
Bioinformatics
, vol.19
, pp. 362-367
-
-
McCarthy, E.M.1
McDonald, J.F.2
-
21
-
-
0029742464
-
TheTy1-copia group retrotransposons of Alliumcepa are distributed throughout the chromosomes but are enriched in the terminal heterochromatin
-
Pearce SR, PichU, HarrisonG, et al. 1996. TheTy1-copia group retrotransposons of Alliumcepa are distributed throughout the chromosomes but are enriched in the terminal heterochromatin. Chromosome Research 4: 357-364.
-
(1996)
Chromosome Research
, vol.4
, pp. 357-364
-
-
Pearce, S.R.1
Pichu, HarrisonG.2
-
22
-
-
0013630297
-
Nested retrotransposons in the intergenic regions of the maize genome
-
SanMiguel P, Tikhonov A, Jin YK, et al. 1996. Nested retrotransposons in the intergenic regions of the maize genome. Science 274: 765-768.
-
(1996)
Science
, vol.274
, pp. 765-768
-
-
Sanmiguel, P.1
Tikhonov, A.2
Jin, Y.K.3
-
23
-
-
0031707062
-
The paleontology of intergene retrotransposons of maize
-
SanMiguel P, Gaut BS, Tikhonov A, Nakajima Y, Bennetzen JL. 1998. The paleontology of intergene retrotransposons of maize. Nature Genetics 20: 43-45.
-
(1998)
Nature Genetics
, vol.20
, pp. 43-45
-
-
Sanmiguel, P.1
Gaut, B.S.2
Tikhonov, A.3
Nakajima, Y.4
Bennetzen, J.L.5
-
25
-
-
0018412514
-
The chromosomes and DNA of Allium cepa
-
Stack SM, Comings DE. 1979. The chromosomes and DNA of Allium cepa. Chromosoma 70: 161-181.
-
(1979)
Chromosoma
, vol.70
, pp. 161-181
-
-
Stack, S.M.1
Comings, D.E.2
-
26
-
-
0036288246
-
Genetic variability of economically important Asparagus species as revealed by genome size analysis and rDNA ITS polymorphisms
-
Stajner N, Bohanec B, Javornik B. 2002. Genetic variability of economically important Asparagus species as revealed by genome size analysis and rDNA ITS polymorphisms. Plant Science 162: 931-937.
-
(2002)
Plant Science
, vol.162
, pp. 931-937
-
-
Stajner, N.1
Bohanec, B.2
Javornik, B.3
-
27
-
-
0004098021
-
-
Version 9, June 2008 [and more or less continuously updated since].
-
Stevens PF. 2001 onwards. Angiosperm Phylogeny Website. Version 9, June 2008 [and more or less continuously updated since]. http:// www.mobot.org/MOBOT/ research/APweb/
-
(2001)
Onwards. Angiosperm Phylogeny Website
-
-
Stevens, P.F.1
-
30
-
-
34547842486
-
Genetic and physical maps around the sex-determining M-locus of the dioecious plant asparagus
-
Telgmann-Rauber A, Jamsari A, KinneyMS, Pires JC, JungC. 2007. Genetic and physical maps around the sex-determining M-locus of the dioecious plant asparagus. Molecular Genetics and Genomics 278: 221-234.
-
(2007)
Molecular Genetics and Genomics
, vol.278
, pp. 221-234
-
-
Telgmann-Rauber, A.1
Jamsari, A.2
Kinney, M.S.3
Pires, J.C.4
Jung, C.5
-
31
-
-
33845186134
-
Analysis of retrotransposon structural diversity uncovers properties and propensities in angiosperm genome evolution
-
Vitte C, Bennetzen JL. 2006. Analysis of retrotransposon structural diversity uncovers properties and propensities in angiosperm genome evolution. Proceedings of the National Academy of Sciences, USA103: 17638-17643.
-
(2006)
Proceedings of the National Academy of Sciences, USA
, vol.103
, pp. 17638-17643
-
-
Vitte, C.1
Bennetzen, J.L.2
-
32
-
-
72849134447
-
Distribution, diversity, evolution, and survival of Helitrons in the maize genome
-
Yang L, Bennetzen JL. 2009. Distribution, diversity, evolution, and survival of Helitrons in the maize genome. Proceedings of the National Academy of Sciences, USA 106: 19922-19927.
-
(2009)
Proceedings of the National Academy of Sciences, USA
, vol.106
, pp. 19922-19927
-
-
Yang, L.1
Bennetzen, J.L.2
|