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Volumn 14, Issue , 2013, Pages

Insights into the European rabbit (Oryctolagus cuniculus) innate immune system: Genetic diversity of the toll-like receptor 3 (TLR3) in wild populations and domestic breeds

Author keywords

European rabbit (Oryctolagus cuniculus); Genetic diversity; RNA virus; Toll like receptor 3 (TLR3)

Indexed keywords

DOUBLE STRANDED RNA; TOLL LIKE RECEPTOR 3; VIRUS RNA;

EID: 84882364866     PISSN: None     EISSN: 14712156     Source Type: Journal    
DOI: 10.1186/1471-2156-14-73     Document Type: Article
Times cited : (30)

References (38)
  • 1
    • 77950343791 scopus 로고    scopus 로고
    • Pattern recognition receptors and inflammation
    • 10.1016/j.cell.2010.01.022, 20303872
    • Takeuchi O, Akira S. Pattern recognition receptors and inflammation. Cell 2010, 140(6):805-820. 10.1016/j.cell.2010.01.022, 20303872.
    • (2010) Cell , vol.140 , Issue.6 , pp. 805-820
    • Takeuchi, O.1    Akira, S.2
  • 2
    • 0035909372 scopus 로고    scopus 로고
    • Recognition of double-stranded RNA and activation of NF-kappaB by toll-like receptor 3
    • 10.1038/35099560, 11607032
    • Alexopoulou L, Holt AC, Medzhitov R, Flavell RA. Recognition of double-stranded RNA and activation of NF-kappaB by toll-like receptor 3. Nature 2001, 413(6857):732-738. 10.1038/35099560, 11607032.
    • (2001) Nature , vol.413 , Issue.6857 , pp. 732-738
    • Alexopoulou, L.1    Holt, A.C.2    Medzhitov, R.3    Flavell, R.A.4
  • 3
    • 71849087971 scopus 로고    scopus 로고
    • The toll-like receptor 3:dsRNA signaling complex
    • 2784288, 19595807
    • Botos I, Liu L, Wang Y, Segal DM, Davies DR. The toll-like receptor 3:dsRNA signaling complex. Biochim Biophys Acta 2009, 1789(9-10):667-674. 2784288, 19595807.
    • (2009) Biochim Biophys Acta , vol.1789 , Issue.9-10 , pp. 667-674
    • Botos, I.1    Liu, L.2    Wang, Y.3    Segal, D.M.4    Davies, D.R.5
  • 4
    • 23344431978 scopus 로고    scopus 로고
    • The molecular structure of the toll-like receptor 3 ligand-binding domain
    • 10.1073/pnas.0505077102, 1182468, 16043704
    • Bell JK, Botos I, Hall PR, Askins J, Shiloach J, Segal DM, Davies DR. The molecular structure of the toll-like receptor 3 ligand-binding domain. Proc Natl Acad Sci USA 2005, 102(31):10976-10980. 10.1073/pnas.0505077102, 1182468, 16043704.
    • (2005) Proc Natl Acad Sci USA , vol.102 , Issue.31 , pp. 10976-10980
    • Bell, J.K.1    Botos, I.2    Hall, P.R.3    Askins, J.4    Shiloach, J.5    Segal, D.M.6    Davies, D.R.7
  • 5
    • 0141559415 scopus 로고    scopus 로고
    • Leucine-rich repeats and pathogen recognition in toll-like receptors
    • 10.1016/S1471-4906(03)00242-4, 14552836
    • Bell JK, Mullen GE, Leifer CA, Mazzoni A, Davies DR, Segal DM. Leucine-rich repeats and pathogen recognition in toll-like receptors. Trends Immunol 2003, 24(10):528-533. 10.1016/S1471-4906(03)00242-4, 14552836.
    • (2003) Trends Immunol , vol.24 , Issue.10 , pp. 528-533
    • Bell, J.K.1    Mullen, G.E.2    Leifer, C.A.3    Mazzoni, A.4    Davies, D.R.5    Segal, D.M.6
  • 6
    • 33646183566 scopus 로고    scopus 로고
    • Genetic analysis of host resistance: toll-like receptor signaling and immunity at large
    • 10.1146/annurev.immunol.24.021605.090552, 16551253
    • Beutler B, Jiang Z, Georgel P, Crozat K, Croker B, Rutschmann S, Du X, Hoebe K. Genetic analysis of host resistance: toll-like receptor signaling and immunity at large. Annu Rev Immunol 2006, 24:353-389. 10.1146/annurev.immunol.24.021605.090552, 16551253.
    • (2006) Annu Rev Immunol , vol.24 , pp. 353-389
    • Beutler, B.1    Jiang, Z.2    Georgel, P.3    Crozat, K.4    Croker, B.5    Rutschmann, S.6    Du, X.7    Hoebe, K.8
  • 7
    • 0030666222 scopus 로고    scopus 로고
    • Innate immunity: the virtues of a nonclonal system of recognition
    • 10.1016/S0092-8674(00)80412-2, 9363937
    • Medzhitov R, Janeway CA. Innate immunity: the virtues of a nonclonal system of recognition. Cell 1997, 91(3):295-298. 10.1016/S0092-8674(00)80412-2, 9363937.
    • (1997) Cell , vol.91 , Issue.3 , pp. 295-298
    • Medzhitov, R.1    Janeway, C.A.2
  • 8
    • 12144286763 scopus 로고    scopus 로고
    • Toll-like receptors 9 and 3 as essential components of innate immune defense against mouse cytomegalovirus infection
    • 10.1073/pnas.0400525101, 373494, 14993594
    • Tabeta K, Georgel P, Janssen E, Du X, Hoebe K, Crozat K, Mudd S, Shamel L, Sovath S, Goode J, et al. Toll-like receptors 9 and 3 as essential components of innate immune defense against mouse cytomegalovirus infection. Proc Natl Acad Sci USA 2004, 101(10):3516-3521. 10.1073/pnas.0400525101, 373494, 14993594.
    • (2004) Proc Natl Acad Sci USA , vol.101 , Issue.10 , pp. 3516-3521
    • Tabeta, K.1    Georgel, P.2    Janssen, E.3    Du, X.4    Hoebe, K.5    Crozat, K.6    Mudd, S.7    Shamel, L.8    Sovath, S.9    Goode, J.10
  • 10
    • 11144273976 scopus 로고    scopus 로고
    • Toll-like receptor 3 mediates West Nile virus entry into the brain causing lethal encephalitis
    • 10.1038/nm1140, 15558055
    • Wang T, Town T, Alexopoulou L, Anderson JF, Fikrig E, Flavell RA. Toll-like receptor 3 mediates West Nile virus entry into the brain causing lethal encephalitis. Nat Med 2004, 10(12):1366-1373. 10.1038/nm1140, 15558055.
    • (2004) Nat Med , vol.10 , Issue.12 , pp. 1366-1373
    • Wang, T.1    Town, T.2    Alexopoulou, L.3    Anderson, J.F.4    Fikrig, E.5    Flavell, R.A.6
  • 11
    • 34248181060 scopus 로고    scopus 로고
    • Detection of polymorphisms in bovine toll-like receptors 3, 7, 8, and 9
    • 10.1016/j.ygeno.2007.02.008, 17442537
    • Cargill EJ, Womack JE. Detection of polymorphisms in bovine toll-like receptors 3, 7, 8, and 9. Genomics 2007, 89(6):745-755. 10.1016/j.ygeno.2007.02.008, 17442537.
    • (2007) Genomics , vol.89 , Issue.6 , pp. 745-755
    • Cargill, E.J.1    Womack, J.E.2
  • 12
    • 57149096236 scopus 로고    scopus 로고
    • Porcine toll-like receptors: the front line of pathogen monitoring and possible implications for disease resistance
    • 10.1016/j.dci.2008.06.001, 18590761
    • Uenishi H, Shinkai H. Porcine toll-like receptors: the front line of pathogen monitoring and possible implications for disease resistance. Dev Comp Immunol 2009, 33(3):353-361. 10.1016/j.dci.2008.06.001, 18590761.
    • (2009) Dev Comp Immunol , vol.33 , Issue.3 , pp. 353-361
    • Uenishi, H.1    Shinkai, H.2
  • 14
    • 62449199004 scopus 로고    scopus 로고
    • Recombination and speciation: loci near centromeres are more differentiated than loci near telomeres between subspecies of the European rabbit (Oryctolagus cuniculus)
    • 2644949, 19015539
    • Carneiro M, Ferrand N, Nachman MW. Recombination and speciation: loci near centromeres are more differentiated than loci near telomeres between subspecies of the European rabbit (Oryctolagus cuniculus). Genetics 2009, 181(2):593-606. 2644949, 19015539.
    • (2009) Genetics , vol.181 , Issue.2 , pp. 593-606
    • Carneiro, M.1    Ferrand, N.2    Nachman, M.W.3
  • 16
    • 33744829544 scopus 로고    scopus 로고
    • Genetic variation at chemokine receptor CCR5 in leporids: alteration at the 2nd extracellular domain by gene conversion with CCR2 in Oryctolagus, but not in Sylvilagus and Lepus species
    • 10.1007/s00251-006-0095-4, 16596402
    • Carmo CR, Esteves PJ, Ferrand N, van der Loo W. Genetic variation at chemokine receptor CCR5 in leporids: alteration at the 2nd extracellular domain by gene conversion with CCR2 in Oryctolagus, but not in Sylvilagus and Lepus species. Immunogenetics 2006, 58(5-6):494-501. 10.1007/s00251-006-0095-4, 16596402.
    • (2006) Immunogenetics , vol.58 , Issue.5-6 , pp. 494-501
    • Carmo, C.R.1    Esteves, P.J.2    Ferrand, N.3    van der Loo, W.4
  • 17
    • 78649997118 scopus 로고    scopus 로고
    • Speciation in the European rabbit (Oryctolagus cuniculus): islands of differentiation on the X chromosome and autosomes
    • 10.1111/j.1558-5646.2010.01092.x, 3058625, 20666840
    • Carneiro M, Blanco-Aguiar JA, Villafuerte R, Ferrand N, Nachman MW. Speciation in the European rabbit (Oryctolagus cuniculus): islands of differentiation on the X chromosome and autosomes. Evolution 2010, 64(12):3443-3460. 10.1111/j.1558-5646.2010.01092.x, 3058625, 20666840.
    • (2010) Evolution , vol.64 , Issue.12 , pp. 3443-3460
    • Carneiro, M.1    Blanco-Aguiar, J.A.2    Villafuerte, R.3    Ferrand, N.4    Nachman, M.W.5
  • 18
    • 57749117400 scopus 로고    scopus 로고
    • Association between expression of the H histo-blood group antigen, alpha1,2fucosyltransferases polymorphism of wild rabbits, and sensitivity to rabbit hemorrhagic disease virus
    • Guillon P, Ruvoen-Clouet N, Le Moullac-Vaidye B, Marchandeau S, Le Pendu J. Association between expression of the H histo-blood group antigen, alpha1,2fucosyltransferases polymorphism of wild rabbits, and sensitivity to rabbit hemorrhagic disease virus. Glycobiology 2009, 19(1):21-28.
    • (2009) Glycobiology , vol.19 , Issue.1 , pp. 21-28
    • Guillon, P.1    Ruvoen-Clouet, N.2    Le Moullac-Vaidye, B.3    Marchandeau, S.4    Le Pendu, J.5
  • 19
    • 11944264602 scopus 로고    scopus 로고
    • Serological evidence for a non-protective RHDV-like virus
    • 10.1051/vetres:2004049, 15610723
    • Marchandeau S, Le Gall-Recule G, Bertagnoli S, Aubineau J, Botti G, Lavazza A. Serological evidence for a non-protective RHDV-like virus. Vet Res 2005, 36(1):53-62. 10.1051/vetres:2004049, 15610723.
    • (2005) Vet Res , vol.36 , Issue.1 , pp. 53-62
    • Marchandeau, S.1    Le Gall-Recule, G.2    Bertagnoli, S.3    Aubineau, J.4    Botti, G.5    Lavazza, A.6
  • 21
    • 58149194624 scopus 로고    scopus 로고
    • SMART 6: recent updates and new developments
    • 2686533, 18978020
    • Letunic I, Doerks T, Bork P. SMART 6: recent updates and new developments. Nucleic acids research 2009, 37(Database issue):D229-232. 2686533, 18978020.
    • (2009) Nucleic acids research , vol.37 , Issue.DATABASE ISSUE
    • Letunic, I.1    Doerks, T.2    Bork, P.3
  • 22
    • 61749099096 scopus 로고    scopus 로고
    • Polymorphism distribution and structural conservation in RNA-sensing toll-like receptors 3, 7, and 8 in pigs
    • Morozumi T, Uenishi H. Polymorphism distribution and structural conservation in RNA-sensing toll-like receptors 3, 7, and 8 in pigs. Biochim Biophys Acta 2009, 4:267-274.
    • (2009) Biochim Biophys Acta , vol.4 , pp. 267-274
    • Morozumi, T.1    Uenishi, H.2
  • 24
    • 0024313579 scopus 로고
    • Statistical method for testing the neutral mutation hypothesis by DNA polymorphism
    • 1203831, 2513255
    • Tajima F. Statistical method for testing the neutral mutation hypothesis by DNA polymorphism. Genetics 1989, 123(3):585-595. 1203831, 2513255.
    • (1989) Genetics , vol.123 , Issue.3 , pp. 585-595
    • Tajima, F.1
  • 25
    • 1642577087 scopus 로고    scopus 로고
    • Allelic variation at the VHa locus in natural populations of rabbit (Oryctolagus cuniculus, L.)
    • Esteves Lanning D, Ferrand N, Knight KL, Zhai SK, Van der Loo W. Allelic variation at the VHa locus in natural populations of rabbit (Oryctolagus cuniculus, L.). J Immunol 2004, 172(2):1044-1053.
    • (2004) J Immunol , vol.172 , Issue.2 , pp. 1044-1053
    • Esteves Lanning, D.1    Ferrand, N.2    Knight, K.L.3    Zhai, S.K.4    Van der Loo, W.5
  • 26
    • 48149094929 scopus 로고    scopus 로고
    • Diversity and evolutionary history of the MHC DQA gene in leporids
    • 10.1007/s00251-008-0309-z, 18584169
    • Surridge AK, van der Loo W, Abrantes J, Carneiro M, Hewitt GM, Esteves PJ. Diversity and evolutionary history of the MHC DQA gene in leporids. Immunogenetics 2008, 60(9):515-525. 10.1007/s00251-008-0309-z, 18584169.
    • (2008) Immunogenetics , vol.60 , Issue.9 , pp. 515-525
    • Surridge, A.K.1    van der Loo, W.2    Abrantes, J.3    Carneiro, M.4    Hewitt, G.M.5    Esteves, P.J.6
  • 27
    • 84857424101 scopus 로고    scopus 로고
    • Myxomatosis in Australia and Europe: a model for emerging infectious diseases
    • 10.1016/j.antiviral.2012.01.009, 22333483
    • Kerr PJ. Myxomatosis in Australia and Europe: a model for emerging infectious diseases. Antiviral Res 2012, 93(3):387-415. 10.1016/j.antiviral.2012.01.009, 22333483.
    • (2012) Antiviral Res , vol.93 , Issue.3 , pp. 387-415
    • Kerr, P.J.1
  • 28
    • 84877145584 scopus 로고    scopus 로고
    • Rabbit haemorrhagic disease (RHD) and rabbit haemorrhagic disease virus (RHDV): a review
    • 10.1186/1297-9716-43-12, 3331820, 22325049
    • Abrantes J, van der Loo W, Le Pendu J, Esteves PJ. Rabbit haemorrhagic disease (RHD) and rabbit haemorrhagic disease virus (RHDV): a review. Vet Res 2012, 43(1):12. 10.1186/1297-9716-43-12, 3331820, 22325049.
    • (2012) Vet Res , vol.43 , Issue.1 , pp. 12
    • Abrantes, J.1    van der Loo, W.2    Le Pendu, J.3    Esteves, P.J.4
  • 29
    • 42349090335 scopus 로고    scopus 로고
    • Structural basis of toll-like receptor 3 signaling with double-stranded RNA
    • 10.1126/science.1155406, 2761030, 18420935
    • Liu L, Botos I, Wang Y, Leonard JN, Shiloach J, Segal DM, Davies DR. Structural basis of toll-like receptor 3 signaling with double-stranded RNA. Science 2008, 320(5874):379-381. 10.1126/science.1155406, 2761030, 18420935.
    • (2008) Science , vol.320 , Issue.5874 , pp. 379-381
    • Liu, L.1    Botos, I.2    Wang, Y.3    Leonard, J.N.4    Shiloach, J.5    Segal, D.M.6    Davies, D.R.7
  • 30
    • 33745048928 scopus 로고    scopus 로고
    • The dsRNA binding site of human toll-like receptor 3
    • 10.1073/pnas.0603245103, 1482657, 16720699
    • Bell JK, Askins J, Hall PR, Davies DR, Segal DM. The dsRNA binding site of human toll-like receptor 3. Proc Natl Acad Sci USA 2006, 103(23):8792-8797. 10.1073/pnas.0603245103, 1482657, 16720699.
    • (2006) Proc Natl Acad Sci USA , vol.103 , Issue.23 , pp. 8792-8797
    • Bell, J.K.1    Askins, J.2    Hall, P.R.3    Davies, D.R.4    Segal, D.M.5
  • 31
    • 23044445303 scopus 로고    scopus 로고
    • Crystal structure of human toll-like receptor 3 (TLR3) ectodomain
    • 10.1126/science.1115253, 15961631
    • Choe J, Kelker MS, Wilson IA. Crystal structure of human toll-like receptor 3 (TLR3) ectodomain. Science 2005, 309(5734):581-585. 10.1126/science.1115253, 15961631.
    • (2005) Science , vol.309 , Issue.5734 , pp. 581-585
    • Choe, J.1    Kelker, M.S.2    Wilson, I.A.3
  • 32
    • 83655181433 scopus 로고    scopus 로고
    • Signatures of positive selection in toll-like receptor (TLR) genes in mammals
    • 10.1186/1471-2148-11-368, 3276489, 22185391
    • Areal H, Abrantes J, Esteves PJ. Signatures of positive selection in toll-like receptor (TLR) genes in mammals. BMC Evol Biol 2011, 11(1):368. 10.1186/1471-2148-11-368, 3276489, 22185391.
    • (2011) BMC Evol Biol , vol.11 , Issue.1 , pp. 368
    • Areal, H.1    Abrantes, J.2    Esteves, P.J.3
  • 33
    • 77955268299 scopus 로고    scopus 로고
    • LRRfinder: a web application for the identification of leucine-rich repeats and an integrative toll-like receptor database
    • 10.1016/j.dci.2010.05.004, 20470819
    • Offord V, Coffey TJ, Werling D. LRRfinder: a web application for the identification of leucine-rich repeats and an integrative toll-like receptor database. Dev Comp Immunol 2010, 34(10):1035-1041. 10.1016/j.dci.2010.05.004, 20470819.
    • (2010) Dev Comp Immunol , vol.34 , Issue.10 , pp. 1035-1041
    • Offord, V.1    Coffey, T.J.2    Werling, D.3
  • 34
    • 34248663955 scopus 로고    scopus 로고
    • The single-step method of RNA isolation by acid guanidinium thiocyanate-phenol-chloroform extraction: twenty-something years on
    • 10.1038/nprot.2006.83, 17406285
    • Chomczynski P, Sacchi N. The single-step method of RNA isolation by acid guanidinium thiocyanate-phenol-chloroform extraction: twenty-something years on. Nat Protoc 2006, 1(2):581-585. 10.1038/nprot.2006.83, 17406285.
    • (2006) Nat Protoc , vol.1 , Issue.2 , pp. 581-585
    • Chomczynski, P.1    Sacchi, N.2
  • 35
    • 0027968068 scopus 로고
    • Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
    • 10.1093/nar/22.22.4673, 308517, 7984417
    • Thompson JD, Higgins DG, Gibson TJ, Clustal W. Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res 1994, 22(22):4673-4680. 10.1093/nar/22.22.4673, 308517, 7984417.
    • (1994) Nucleic Acids Res , vol.22 , Issue.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3    Clustal, W.4
  • 36
    • 0002051540 scopus 로고    scopus 로고
    • BioEdit: a user-friendly biological sequence alignment editor and analysis program for windows 95/98/NT
    • Hall TA. BioEdit: a user-friendly biological sequence alignment editor and analysis program for windows 95/98/NT. Nucl Acids Symp 1999, 41:95-98.
    • (1999) Nucl Acids Symp , vol.41 , pp. 95-98
    • Hall, T.A.1
  • 37
    • 0242691208 scopus 로고    scopus 로고
    • A comparison of bayesian methods for haplotype reconstruction from population genotype data
    • 10.1086/379378, 1180495, 14574645
    • Stephens M, Donnelly P. A comparison of bayesian methods for haplotype reconstruction from population genotype data. Am J Hum Genet 2003, 73(5):1162-1169. 10.1086/379378, 1180495, 14574645.
    • (2003) Am J Hum Genet , vol.73 , Issue.5 , pp. 1162-1169
    • Stephens, M.1    Donnelly, P.2
  • 38
    • 65649117685 scopus 로고    scopus 로고
    • DnaSP v5: a software for comprehensive analysis of DNA polymorphism data
    • Librado P, Rozas J. DnaSP v5: a software for comprehensive analysis of DNA polymorphism data. Bioinformatics (Oxford, England) 2009, 25(11):1451-1452.
    • (2009) Bioinformatics (Oxford, England) , vol.25 , Issue.11 , pp. 1451-1452
    • Librado, P.1    Rozas, J.2


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