-
1
-
-
79955620198
-
Constructing and decoding unconventional ubiquitin chains
-
Behrends, C., and Harper, J. W. (2011) Constructing and decoding unconventional ubiquitin chains. Nat. Struct. Mol. Biol. 18, 520-528
-
(2011)
Nat. Struct. Mol. Biol.
, vol.18
, pp. 520-528
-
-
Behrends, C.1
Harper, J.W.2
-
2
-
-
67650620318
-
Regulation and cellular roles of ubiquitin-specific deubiquitinating enzymes
-
Reyes-Turcu, F. E., VentIII, K. H., and Wilkinson, K. D. (2009) Regulation and cellular roles of ubiquitin-specific deubiquitinating enzymes. Annu. Rev. Biochem. 78, 363-397
-
(2009)
Annu. Rev. Biochem.
, vol.78
, pp. 363-397
-
-
Reyes-Turcu, F.E.1
Ventii, K.H.2
Wilkinson, K.D.3
-
3
-
-
84655176306
-
The role of ubiquitylation in immune defence and pathogen evasion
-
Jiang, X., and Chen, Z. J. (2011) The role of ubiquitylation in immune defence and pathogen evasion. Nat. Rev. Immunol. 12, 35-48
-
(2011)
Nat. Rev. Immunol.
, vol.12
, pp. 35-48
-
-
Jiang, X.1
Chen, Z.J.2
-
4
-
-
77951260924
-
The role of pattern-recognition receptors in innate immunity: Update on Toll-like receptors
-
Kawai, T., and Akira, S. (2010) The role of pattern-recognition receptors in innate immunity: update on Toll-like receptors. Nat. Immunol. 11, 373-384
-
(2010)
Nat. Immunol.
, vol.11
, pp. 373-384
-
-
Kawai, T.1
Akira, S.2
-
5
-
-
75249101443
-
Hijacking the host ubiquitin pathway: Structural strategies of bacterial E3 ubiquitin ligases
-
Hicks, S. W., and Galan, J. E. (2010) Hijacking the host ubiquitin pathway: structural strategies of bacterial E3 ubiquitin ligases. Curr. Opin. Microbiol. 13, 41-46
-
(2010)
Curr. Opin. Microbiol.
, vol.13
, pp. 41-46
-
-
Hicks, S.W.1
Galan, J.E.2
-
6
-
-
44449107633
-
Salmonella secreted factor L deubiquitinase of Salmonella typhimurium inhibits NF-kappaB, suppresses Ikappa- Balpha ubiquitination and modulates innate immune responses
-
Le Negrate, G., Faustin, B., Welsh, K., Loeffler, M., Krajewska, M., Hasegawa, P., Mukherjee, S., Orth, K., Krajewski, S., Godzik, A., Guiney, D. G., and Reed, J. C. (2008) Salmonella secreted factor L deubiquitinase of Salmonella typhimurium inhibits NF-kappaB, suppresses Ikappa- Balpha ubiquitination and modulates innate immune responses. J. Immunol. 180, 5045-5056
-
(2008)
J. Immunol.
, vol.180
, pp. 5045-5056
-
-
Le Negrate, G.1
Faustin, B.2
Welsh, K.3
Loeffler, M.4
Krajewska, M.5
Hasegawa, P.6
Mukherjee, S.7
Orth, K.8
Krajewski, S.9
Godzik, A.10
Guiney, D.G.11
Reed, J.C.12
-
7
-
-
84863331725
-
Modeldriven multi-omic data analysis elucidates metabolic immunomodulators of macrophage activation
-
Bordbar, A., Mo, M. L., Nakayasu, E. S., Schrimpe-Rutledge, A. C., Kim, Y. M., Metz, T. O., Jones, M. B., Frank, B. C., Smith, R. D., Peterson, S. N., Hyduke, D. R., Adkins, J. N., and Palsson, B. O. (2012) Modeldriven multi-omic data analysis elucidates metabolic immunomodulators of macrophage activation. Mol. Syst. Biol. 8, 558
-
(2012)
Mol. Syst. Biol.
, vol.8
, pp. 558
-
-
Bordbar, A.1
Mo, M.L.2
Nakayasu, E.S.3
Schrimpe-Rutledge, A.C.4
Kim, Y.M.5
Metz, T.O.6
Jones, M.B.7
Frank, B.C.8
Smith, R.D.9
Peterson, S.N.10
Hyduke, D.R.11
Adkins, J.N.12
Palsson, B.O.13
-
8
-
-
34250782684
-
Extraction, purification and analysis of histones
-
Shechter, D., Dormann, H. L., Allis, C. D., and Hake, S. B. (2007) Extraction, purification and analysis of histones. Nat. Protoc. 2, 1445-1457
-
(2007)
Nat. Protoc.
, vol.2
, pp. 1445-1457
-
-
Shechter, D.1
Dormann, H.L.2
Allis, C.D.3
Hake, S.B.4
-
9
-
-
0037154160
-
Budding yeast Dsk2p is a polyubiquitin-binding protein that can interact with the proteasome
-
Funakoshi, M., Sasaki, T., Nishimoto, T., and Kobayashi, H. (2002) Budding yeast Dsk2p is a polyubiquitin-binding protein that can interact with the proteasome. Proc. Natl. Acad. Sci. U.S.A. 99, 745-750
-
(2002)
Proc. Natl. Acad. Sci. U.S.A.
, vol.99
, pp. 745-750
-
-
Funakoshi, M.1
Sasaki, T.2
Nishimoto, T.3
Kobayashi, H.4
-
10
-
-
62849101179
-
Global systems-level analysis of Hfq and SmpB deletion mutants in Salmonella: Implications for virulence and global protein translation
-
Ansong, C., Yoon, H., Porwollik, S., Mottaz-Brewer, H., Petritis, B. O., Jaitly, N., Adkins, J. N., McClelland, M., Heffron, F., and Smith, R. D. (2009) Global systems-level analysis of Hfq and SmpB deletion mutants in Salmonella: implications for virulence and global protein translation. PLoS One 4, e4809
-
(2009)
PLoS One
, vol.4
-
-
Ansong, C.1
Yoon, H.2
Porwollik, S.3
Mottaz-Brewer, H.4
Petritis, B.O.5
Jaitly, N.6
Adkins, J.N.7
McClelland, M.8
Heffron, F.9
Smith, R.D.10
-
11
-
-
79955752894
-
Reversed-phase chromatography with multiple fraction concatenation strategy for proteome profiling of human MCF10A cells
-
Wang, Y., Yang, F., Gritsenko, M. A., Clauss, T., Liu, T., Shen, Y., Monroe, M. E., Lopez-Ferrer, D., Reno, T., Moore, R. J., Klemke, R. L., Camp, D. G., 2nd, and Smith, R. D. (2011) Reversed-phase chromatography with multiple fraction concatenation strategy for proteome profiling of human MCF10A cells. Proteomics 11, 2019-2026
-
(2011)
Proteomics
, vol.11
, pp. 2019-2026
-
-
Wang, Y.1
Yang, F.2
Gritsenko, M.A.3
Clauss, T.4
Liu, T.5
Shen, Y.6
Monroe, M.E.7
Lopez-Ferrer, D.8
Reno, T.9
Moore, R.J.10
Klemke, R.L.11
Camp, I.I.D.G.12
Smith, R.D.13
-
12
-
-
41149134523
-
Fully automated four-column capillary LC-MS system for maximizing throughput in proteomic analyses
-
Livesay, E. A., Tang, K., Taylor, B. K., Buschbach, M. A., Hopkins, D. F., LaMarche, B. L., Zhao, R., Shen, Y., Orton, D. J., Moore, R. J., Kelly, R. T., Udseth, H. R., and Smith, R. D. (2008) Fully automated four-column capillary LC-MS system for maximizing throughput in proteomic analyses. Anal. Chem. 80, 294-302
-
(2008)
Anal. Chem.
, vol.80
, pp. 294-302
-
-
Livesay, E.A.1
Tang, K.2
Taylor, B.K.3
Buschbach, M.A.4
Hopkins, D.F.5
Lamarche, B.L.6
Zhao, R.7
Shen, Y.8
Orton, D.J.9
Moore, R.J.10
Kelly, R.T.11
Udseth, H.R.12
Smith, R.D.13
-
13
-
-
50149117169
-
Spectral probabilities and generating functions of tandem mass spectra: A strike against decoy databases
-
Kim, S., Gupta, N., and Pevzner, P. A. (2008) Spectral probabilities and generating functions of tandem mass spectra: a strike against decoy databases. J. Proteome Res. 7, 3354-3363
-
(2008)
J. Proteome Res.
, vol.7
, pp. 3354-3363
-
-
Kim, S.1
Gupta, N.2
Pevzner, P.A.3
-
14
-
-
84855558173
-
Improved proteomic approach for the discovery of potential vaccine targets in Trypanosoma cruzi
-
Nakayasu, E. S., Sobreira, T. J., Torres, R., Jr., Ganiko, L., Oliveira, P. S., Marques, A. F., and Almeida, I. C. (2012) Improved proteomic approach for the discovery of potential vaccine targets in Trypanosoma cruzi. J. Proteome Res. 11, 237-246
-
(2012)
J. Proteome Res.
, vol.11
, pp. 237-246
-
-
Nakayasu, E.S.1
Sobreira, T.J.2
Torres Jr., R.3
Ganiko, L.4
Oliveira, P.S.5
Marques, A.F.6
Almeida, I.C.7
-
15
-
-
61449172037
-
Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources
-
Huang da, W., Sherman, B. T., and Lempicki, R. A. (2009) Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources. Nat. Protoc. 4, 44-57
-
(2009)
Nat. Protoc.
, vol.4
, pp. 44-57
-
-
Huang Da, W.1
Sherman, B.T.2
Lempicki, R.A.3
-
16
-
-
77949837209
-
An Slfn2 mutation causes lymphoid and myeloid immunodeficiency due to loss of immune cell quiescence
-
Berger, M., Krebs, P., Crozat, K., Li, X., Croker, B. A., Siggs, O. M., Popkin, D., Du, X., Lawson, B. R., Theofilopoulos, A. N., Xia, Y., Khovananth, K., Moresco, E. M., Satoh, T., Takeuchi, O., Akira, S., and Beutler, B. (2010) An Slfn2 mutation causes lymphoid and myeloid immunodeficiency due to loss of immune cell quiescence. Nat. Immunol. 11, 335-343
-
(2010)
Nat. Immunol.
, vol.11
, pp. 335-343
-
-
Berger, M.1
Krebs, P.2
Crozat, K.3
Li, X.4
Croker, B.A.5
Siggs, O.M.6
Popkin, D.7
Du, X.8
Lawson, B.R.9
Theofilopoulos, A.N.10
Xia, Y.11
Khovananth, K.12
Moresco, E.M.13
Satoh, T.14
Takeuchi, O.15
Akira, S.16
Beutler, B.17
-
17
-
-
84861234337
-
Aminoacyl-tRNA synthetase-interacting multifunctional protein-1 (AIMP1): The member of a molecular hub with unexpected functions, including CD4 T cell homeostasis
-
Burastero, S. E., and Fabbri, M. (2012) Aminoacyl-tRNA synthetase-interacting multifunctional protein-1 (AIMP1): the member of a molecular hub with unexpected functions, including CD4 T cell homeostasis. Clin. Immunol. 143, 207-209
-
(2012)
Clin. Immunol.
, vol.143
, pp. 207-209
-
-
Burastero, S.E.1
Fabbri, M.2
-
18
-
-
38049083888
-
Primer: Inflammasomes and interleukin 1beta in inflammatory disorders
-
Church, L. D., Cook, G. P., and McDermott, M. F. (2008) Primer: inflammasomes and interleukin 1beta in inflammatory disorders. Nat. Clin. Pract. Rheumatol. 4, 34-42
-
(2008)
Nat. Clin. Pract. Rheumatol.
, vol.4
, pp. 34-42
-
-
Church, L.D.1
Cook, G.P.2
McDermott, M.F.3
-
19
-
-
77953377110
-
Hemoglobin transforms anti-inflammatory Salmonella typhi virulence polysaccharide into a TLR-2 agonist
-
Garg, R., and Qadri, A. (2010) Hemoglobin transforms anti-inflammatory Salmonella typhi virulence polysaccharide into a TLR-2 agonist. J. Immunol. 184, 5980-5987
-
(2010)
J. Immunol.
, vol.184
, pp. 5980-5987
-
-
Garg, R.1
Qadri, A.2
-
20
-
-
57749107726
-
FLN29 deficiency reveals its negative regulatory role in the Toll-like receptor (TLR) and retinoic acid-inducible gene i (RIG-I)-like helicase signaling pathway
-
Sanada, T., Takaesu, G., Mashima, R., Yoshida, R., Kobayashi, T., and Yoshimura, A. (2008) FLN29 deficiency reveals its negative regulatory role in the Toll-like receptor (TLR) and retinoic acid-inducible gene I (RIG-I)-like helicase signaling pathway. J. Biol. Chem. 283, 33858-33864
-
(2008)
J. Biol. Chem.
, vol.283
, pp. 33858-33864
-
-
Sanada, T.1
Takaesu, G.2
Mashima, R.3
Yoshida, R.4
Kobayashi, T.5
Yoshimura, A.6
-
21
-
-
22644447586
-
LPS regulates a set of genes in primary murine macrophages by antagonising CSF-1 action
-
Sester, D. P., Trieu, A., Brion, K., Schroder, K., Ravasi, T., Robinson, J. A., McDonald, R. C., Ripoll, V., Wells, C. A., Suzuki, H., Hayashizaki, Y., Stacey, K. J., Hume, D. A., and Sweet, M. J. (2005) LPS regulates a set of genes in primary murine macrophages by antagonising CSF-1 action. Immunobiology 210, 97-107
-
(2005)
Immunobiology
, vol.210
, pp. 97-107
-
-
Sester, D.P.1
Trieu, A.2
Brion, K.3
Schroder, K.4
Ravasi, T.5
Robinson, J.A.6
McDonald, R.C.7
Ripoll, V.8
Wells, C.A.9
Suzuki, H.10
Hayashizaki, Y.11
Stacey, K.J.12
Hume, D.A.13
Sweet, M.J.14
-
22
-
-
70450252183
-
RIOK3 interacts with caspase-10 and negatively regulates the NF-kappaB signaling pathway
-
Shan, J., Wang, P., Zhou, J., Wu, D., Shi, H., and Huo, K. (2009) RIOK3 interacts with caspase-10 and negatively regulates the NF-kappaB signaling pathway. Mol. Cell. Biochem. 332, 113-120
-
(2009)
Mol. Cell. Biochem.
, vol.332
, pp. 113-120
-
-
Shan, J.1
Wang, P.2
Zhou, J.3
Wu, D.4
Shi, H.5
Huo, K.6
-
23
-
-
79959538186
-
IMPDHIII protein inhibits Toll-like receptor 2-mediated activation of NF-kappaB
-
Toubiana, J., Rossi, A. L., Grimaldi, D., Belaidouni, N., Chafey, P., Clary, G., Courtine, E., Pene, F., Mira, J. P., Claessens, Y. E., and Chiche, J. D. (2011) IMPDHIII protein inhibits Toll-like receptor 2-mediated activation of NF-kappaB. J. Biol. Chem. 286, 23319-23333
-
(2011)
J. Biol. Chem.
, vol.286
, pp. 23319-23333
-
-
Toubiana, J.1
Rossi, A.L.2
Grimaldi, D.3
Belaidouni, N.4
Chafey, P.5
Clary, G.6
Courtine, E.7
Pene, F.8
Mira, J.P.9
Claessens, Y.E.10
Chiche, J.D.11
-
24
-
-
78651402182
-
A CSF-1 receptor phosphotyrosine 559 signaling pathway regulates receptor ubiquitination and tyrosine phosphorylation
-
Xiong, Y., Song, D., Cai, Y., Yu, W., Yeung, Y. G., and Stanley, E. R. (2011) A CSF-1 receptor phosphotyrosine 559 signaling pathway regulates receptor ubiquitination and tyrosine phosphorylation. J. Biol. Chem. 286, 952-960
-
(2011)
J. Biol. Chem.
, vol.286
, pp. 952-960
-
-
Xiong, Y.1
Song, D.2
Cai, Y.3
Yu, W.4
Yeung, Y.G.5
Stanley, E.R.6
-
25
-
-
60549100850
-
Ubiquitination directly enhances activity of the deubiquitinating enzyme ataxin-3
-
Todi, S. V., Winborn, B. J., Scaglione, K. M., Blount, J. R., Travis, S. M., and Paulson, H. L. (2009) Ubiquitination directly enhances activity of the deubiquitinating enzyme ataxin-3. EMBO J. 28, 372-382
-
(2009)
EMBO J.
, vol.28
, pp. 372-382
-
-
Todi, S.V.1
Winborn, B.J.2
Scaglione, K.M.3
Blount, J.R.4
Travis, S.M.5
Paulson, H.L.6
-
26
-
-
0042847104
-
The proteasome as a lipopolysaccharide- binding protein in macrophages: Differential effects of proteasome inhibition on lipopolysaccharide-induced signaling events
-
Qureshi, N., Perera, P. Y., Shen, J., Zhang, G., Lenschat, A., Splitter, G., Morrison, D. C., and Vogel, S. N. (2003) The proteasome as a lipopolysaccharide- binding protein in macrophages: differential effects of proteasome inhibition on lipopolysaccharide-induced signaling events. J. Immunol. 171, 1515-1525
-
(2003)
J. Immunol.
, vol.171
, pp. 1515-1525
-
-
Qureshi, N.1
Perera, P.Y.2
Shen, J.3
Zhang, G.4
Lenschat, A.5
Splitter, G.6
Morrison, D.C.7
Vogel, S.N.8
-
27
-
-
18244400702
-
The proteasome: A central regulator of inflammation and macrophage function
-
Qureshi, N., Vogel, S. N., Van Way, C., 3rd, Papasian, C. J., Qureshi, A. A., and Morrison, D. C. (2005) The proteasome: a central regulator of inflammation and macrophage function. Immunol. Res. 31, 243-260
-
(2005)
Immunol. Res.
, vol.31
, pp. 243-260
-
-
Qureshi, N.1
Vogel, S.N.2
Van Way III, C.3
Papasian, C.J.4
Qureshi, A.A.5
Morrison, D.C.6
-
28
-
-
0036968725
-
Proteasome-dependent processing of nuclear proteins is correlated with their subnuclear localization
-
Dino Rockel, T., and von Mikecz, A. (2002) Proteasome-dependent processing of nuclear proteins is correlated with their subnuclear localization. J. Struct. Biol. 140, 189-199
-
(2002)
J. Struct. Biol.
, vol.140
, pp. 189-199
-
-
Dino Rockel, T.1
Von Mikecz, A.2
-
29
-
-
43049138051
-
Mature ribosomes are selectively degraded upon starvation by an autophagy pathway requiring the Ubp3p/Bre5p ubiquitin protease
-
Kraft, C., Deplazes, A., Sohrmann, M., and Peter, M. (2008) Mature ribosomes are selectively degraded upon starvation by an autophagy pathway requiring the Ubp3p/Bre5p ubiquitin protease. Nat. Cell. Biol. 10, 602-610
-
(2008)
Nat. Cell. Biol.
, vol.10
, pp. 602-610
-
-
Kraft, C.1
Deplazes, A.2
Sohrmann, M.3
Peter, M.4
-
30
-
-
54249111115
-
The yeast GID complex, a novel ubiquitin ligase (E3) involved in the regulation of carbohydrate metabolism
-
Santt, O., Pfirrmann, T., Braun, B., Juretschke, J., Kimmig, P., Scheel, H., Hofmann, K., Thumm, M., and Wolf, D. H. (2008) The yeast GID complex, a novel ubiquitin ligase (E3) involved in the regulation of carbohydrate metabolism. Mol. Biol. Cell 19, 3323-3333
-
(2008)
Mol. Biol. Cell
, vol.19
, pp. 3323-3333
-
-
Santt, O.1
Pfirrmann, T.2
Braun, B.3
Juretschke, J.4
Kimmig, P.5
Scheel, H.6
Hofmann, K.7
Thumm, M.8
Wolf, D.H.9
-
31
-
-
78651065175
-
The ubiquitin C-terminal hydrolase UCH-L1 promotes bacterial invasion by altering the dynamics of the actin cytoskeleton
-
Basseres, E., Coppotelli, G., Pfirrmann, T., Andersen, J. B., Masucci, M., and Frisan, T. (2010) The ubiquitin C-terminal hydrolase UCH-L1 promotes bacterial invasion by altering the dynamics of the actin cytoskeleton. Cell. Microbiol. 12, 1622-1633
-
(2010)
Cell. Microbiol.
, vol.12
, pp. 1622-1633
-
-
Basseres, E.1
Coppotelli, G.2
Pfirrmann, T.3
Andersen, J.B.4
Masucci, M.5
Frisan, T.6
-
32
-
-
78650411683
-
HDAC3 is negatively regulated by the nuclear protein DBC1
-
Chini, C. C., Escande, C., Nin, V., and Chini, E. N. (2010) HDAC3 is negatively regulated by the nuclear protein DBC1. J. Biol. Chem. 285, 40830-40837
-
(2010)
J. Biol. Chem.
, vol.285
, pp. 40830-40837
-
-
Chini, C.C.1
Escande, C.2
Nin, V.3
Chini, E.N.4
-
33
-
-
23744485726
-
Caspasedependent processing activates the proapoptotic activity of deleted in breast cancer-1 during tumor necrosis factor-Alpha-mediated death signaling
-
Sundararajan, R., Chen, G., Mukherjee, C., and White, E. (2005) Caspasedependent processing activates the proapoptotic activity of deleted in breast cancer-1 during tumor necrosis factor-Alpha-mediated death signaling. Oncogene 24, 4908-4920
-
(2005)
Oncogene
, vol.24
, pp. 4908-4920
-
-
Sundararajan, R.1
Chen, G.2
Mukherjee, C.3
White, E.4
-
34
-
-
38749132992
-
Negative regulation of the deacetylase SIRT1 by DBC1
-
Zhao, W., Kruse, J. P., Tang, Y., Jung, S. Y., Qin, J., and Gu, W. (2008) Negative regulation of the deacetylase SIRT1 by DBC1. Nature 451, 587-590
-
(2008)
Nature
, vol.451
, pp. 587-590
-
-
Zhao, W.1
Kruse, J.P.2
Tang, Y.3
Jung, S.Y.4
Qin, J.5
Gu, W.6
-
35
-
-
84859910490
-
DBIRD complex integrates alternative mRNA splicing with RNA polymerase III transcript elongation
-
Close, P., East, P., Dirac-Svejstrup, A. B., Hartmann, H., Heron, M., Maslen, S., Chariot, A., Soding, J., Skehel, M., and Svejstrup, J. Q. (2012) DBIRD complex integrates alternative mRNA splicing with RNA polymerase III transcript elongation. Nature 484, 386-389
-
(2012)
Nature
, vol.484
, pp. 386-389
-
-
Close, P.1
East, P.2
Dirac-Svejstrup, A.B.3
Hartmann, H.4
Heron, M.5
Maslen, S.6
Chariot, A.7
Soding, J.8
Skehel, M.9
Svejstrup, J.Q.10
-
36
-
-
76649085804
-
Deleted in breast cancer-1 regulates SIRT1 activity and contributes to high-fat diet-induced liver steatosis in mice
-
Escande, C., Chini, C. C., Nin, V., Dykhouse, K. M., Novak, C. M., Levine, J., van Deursen, J., Gores, G. J., Chen, J., Lou, Z., and Chini, E. N. (2010) Deleted in breast cancer-1 regulates SIRT1 activity and contributes to high-fat diet-induced liver steatosis in mice. J. Clin. Invest. 120, 545-558
-
(2010)
J. Clin. Invest.
, vol.120
, pp. 545-558
-
-
Escande, C.1
Chini, C.C.2
Nin, V.3
Dykhouse, K.M.4
Novak, C.M.5
Levine, J.6
Van Deursen, J.7
Gores, G.J.8
Chen, J.9
Lou, Z.10
Chini, E.N.11
-
37
-
-
0035119296
-
Inhibition of caspase 3 abrogates lipopolysaccharide- induced nitric oxide production by preventing activation of NF-kappaB and c-Jun NH2-terminal kinase/stress-Activated protein kinase in RAW 27 murine macrophage cells
-
Chakravortty, D., Kato, Y., Sugiyama, T., Koide, N., Mu, M. M., Yoshida, T., and Yokochi, T. (2001) Inhibition of caspase 3 abrogates lipopolysaccharide- induced nitric oxide production by preventing activation of NF-kappaB and c-Jun NH2-terminal kinase/stress-Activated protein kinase in RAW 27 murine macrophage cells. Infect. Immun. 69, 1315-1321
-
(2001)
Infect. Immun.
, vol.69
, pp. 1315-1321
-
-
Chakravortty, D.1
Kato, Y.2
Sugiyama, T.3
Koide, N.4
Mu, M.M.5
Yoshida, T.6
Yokochi, T.7
-
38
-
-
0035902601
-
Ubiquitin-protein ligase activity of X-linked inhibitor of apoptosis protein promotes proteasomal degradation of caspase-3 and enhances its anti-Apoptotic effect in Fas-induced cell death
-
Suzuki, Y., Nakabayashi, Y., and Takahashi, R. (2001) Ubiquitin-protein ligase activity of X-linked inhibitor of apoptosis protein promotes proteasomal degradation of caspase-3 and enhances its anti-Apoptotic effect in Fas-induced cell death. Proc. Natl. Acad. Sci. U.S.A. 98, 8662-8667
-
(2001)
Proc. Natl. Acad. Sci. U.S.A.
, vol.98
, pp. 8662-8667
-
-
Suzuki, Y.1
Nakabayashi, Y.2
Takahashi, R.3
-
39
-
-
34250823515
-
Gene-specific control of inflammation by TLR-induced chromatin modifications
-
Foster, S. L., Hargreaves, D. C., and Medzhitov, R. (2007) Gene-specific control of inflammation by TLR-induced chromatin modifications. Nature 447, 972-978
-
(2007)
Nature
, vol.447
, pp. 972-978
-
-
Foster, S.L.1
Hargreaves, D.C.2
Medzhitov, R.3
-
40
-
-
59149085480
-
Quantitative proteomics analysis of macrophage rafts reveals compartmentalized activation of the proteasome and of proteasome-mediated ERK activation in response to lipopolysaccharide
-
Dhungana, S., Merrick, B. A., Tomer, K. B., and Fessler, M. B. (2009) Quantitative proteomics analysis of macrophage rafts reveals compartmentalized activation of the proteasome and of proteasome-mediated ERK activation in response to lipopolysaccharide. Mol. Cell. Proteomics 8, 201-213
-
(2009)
Mol. Cell. Proteomics
, vol.8
, pp. 201-213
-
-
Dhungana, S.1
Merrick, B.A.2
Tomer, K.B.3
Fessler, M.B.4
-
41
-
-
84858725584
-
Regulation of NF-kappaB by deubiquitinases
-
Harhaj, E. W., and Dixit, V. M. (2012) Regulation of NF-kappaB by deubiquitinases. Immunol. Rev. 246, 107-124
-
(2012)
Immunol. Rev.
, vol.246
, pp. 107-124
-
-
Harhaj, E.W.1
Dixit, V.M.2
-
42
-
-
84859507872
-
Ubiquitin-specific protease 4 mitigates Toll-like/interleukin-1 receptor signaling and regulates innate immune activation
-
Zhou, F., Zhang, X., Dam, H. V., Dijke, P. T., Huang, H., and Zhang, L. (2012) Ubiquitin-specific protease 4 mitigates Toll-like/interleukin-1 receptor signaling and regulates innate immune activation. J. Biol. Chem. 287, 11002-11010
-
(2012)
J. Biol. Chem.
, vol.287
, pp. 11002-11010
-
-
Zhou, F.1
Zhang, X.2
Dam, H.V.3
Dijke, P.T.4
Huang, H.5
Zhang, L.6
-
43
-
-
18144368948
-
Regulation of the deubiquitinating enzyme CYLD by IkappaB kinase gamma-dependent phosphorylation
-
Reiley, W., Zhang, M., Wu, X., Granger, E., and Sun, S. C. (2005) Regulation of the deubiquitinating enzyme CYLD by IkappaB kinase gamma-dependent phosphorylation. Mol. Cell. Biol. 25, 3886-3895
-
(2005)
Mol. Cell. Biol.
, vol.25
, pp. 3886-3895
-
-
Reiley, W.1
Zhang, M.2
Wu, X.3
Granger, E.4
Sun, S.C.5
-
44
-
-
0034672626
-
Lipopolysaccharide induces the expression of cellular inhibitor of apoptosis protein-2 in human macrophages
-
Cui, X., Imaizumi, T., Yoshida, H., Tanji, K., Matsumiya, T., and Satoh, K. (2000) Lipopolysaccharide induces the expression of cellular inhibitor of apoptosis protein-2 in human macrophages. Biochim. Biophys. Acta 1524, 178-182
-
(2000)
Biochim. Biophys. Acta
, vol.1524
, pp. 178-182
-
-
Cui, X.1
Imaizumi, T.2
Yoshida, H.3
Tanji, K.4
Matsumiya, T.5
Satoh, K.6
-
45
-
-
33746499843
-
LPS regulates proinflammatory gene expression in macrophages by altering histone deacetylase expression
-
Aung, H. T., Schroder, K., Himes, S. R., Brion, K., van Zuylen, W., Trieu, A., Suzuki, H., Hayashizaki, Y., Hume, D. A., Sweet, M. J., and Ravasi, T. (2006) LPS regulates proinflammatory gene expression in macrophages by altering histone deacetylase expression. FASEB J. 20, 1315-1327
-
(2006)
FASEB J.
, vol.20
, pp. 1315-1327
-
-
Aung, H.T.1
Schroder, K.2
Himes, S.R.3
Brion, K.4
Van Zuylen, W.5
Trieu, A.6
Suzuki, H.7
Hayashizaki, Y.8
Hume, D.A.9
Sweet, M.J.10
Ravasi, T.11
-
46
-
-
77954013043
-
Differential effects of selective HDAC inhibitors on macrophage inflammatory responses to the Toll-like receptor 4 agonist LPS
-
Halili, M. A., Andrews, M. R., Labzin, L. I., Schroder, K., Matthias, G., Cao, C., Lovelace, E., Reid, R. C., Le, G. T., Hume, D. A., Irvine, K. M., Matthias, P., Fairlie, D. P., and Sweet, M. J. (2010) Differential effects of selective HDAC inhibitors on macrophage inflammatory responses to the Toll-like receptor 4 agonist LPS. J. Leukoc. Biol. 87, 1103-1114
-
(2010)
J. Leukoc. Biol.
, vol.87
, pp. 1103-1114
-
-
Halili, M.A.1
Andrews, M.R.2
Labzin, L.I.3
Schroder, K.4
Matthias, G.5
Cao, C.6
Lovelace, E.7
Reid, R.C.8
Le, G.T.9
Hume, D.A.10
Irvine, K.M.11
Matthias, P.12
Fairlie, D.P.13
Sweet, M.J.14
-
47
-
-
80053428068
-
Histone deacetylase inhibitors impair antibacterial defenses of macrophages
-
Mombelli, M., Lugrin, J., Rubino, I., Chanson, A. L., Giddey, M., Calandra, T., and Roger, T. (2011) Histone deacetylase inhibitors impair antibacterial defenses of macrophages. J. Infect. Dis. 204, 1367-1374
-
(2011)
J. Infect. Dis.
, vol.204
, pp. 1367-1374
-
-
Mombelli, M.1
Lugrin, J.2
Rubino, I.3
Chanson, A.L.4
Giddey, M.5
Calandra, T.6
Roger, T.7
-
48
-
-
79251554670
-
Histone deacetylase inhibitors impair innate immune responses to Toll-like receptor agonists and to infection
-
Roger, T., Lugrin, J., Le Roy, D., Goy, G., Mombelli, M., Koessler, T., Ding, X. C., Chanson, A. L., Reymond, M. K., Miconnet, I., Schrenzel, J., Francois, P., and Calandra, T. (2011) Histone deacetylase inhibitors impair innate immune responses to Toll-like receptor agonists and to infection. Blood 117, 1205-1217
-
(2011)
Blood
, vol.117
, pp. 1205-1217
-
-
Roger, T.1
Lugrin, J.2
Le Roy, D.3
Goy, G.4
Mombelli, M.5
Koessler, T.6
Ding, X.C.7
Chanson, A.L.8
Reymond, M.K.9
Miconnet, I.10
Schrenzel, J.11
Francois, P.12
Calandra, T.13
-
49
-
-
0037497184
-
A nucleosomal function for IkappaB kinasealpha in NF-kappaB-dependent gene expression
-
Anest, V., Hanson, J. L., Cogswell, P. C., Steinbrecher, K. A., Strahl, B. D., and Baldwin, A. S. (2003) A nucleosomal function for IkappaB kinasealpha in NF-kappaB-dependent gene expression. Nature 423, 659-663
-
(2003)
Nature
, vol.423
, pp. 659-663
-
-
Anest, V.1
Hanson, J.L.2
Cogswell, P.C.3
Steinbrecher, K.A.4
Strahl, B.D.5
Baldwin, A.S.6
-
50
-
-
34548644772
-
The histone H3 lysine-27 demethylase Jmjd3 links inflammation to inhibition of polycomb-mediated gene silencing
-
De Santa, F., Totaro, M. G., Prosperini, E., Notarbartolo, S., Testa, G., and Natoli, G. (2007) The histone H3 lysine-27 demethylase Jmjd3 links inflammation to inhibition of polycomb-mediated gene silencing. Cell 130, 1083-1094
-
(2007)
Cell
, vol.130
, pp. 1083-1094
-
-
De Santa, F.1
Totaro, M.G.2
Prosperini, E.3
Notarbartolo, S.4
Testa, G.5
Natoli, G.6
-
51
-
-
0038511129
-
Histone H3 phosphorylation by IKK-Alpha is critical for cytokineinduced gene expression
-
Yamamoto, Y., Verma, U. N., Prajapati, S., Kwak, Y. T., and Gaynor, R. B. (2003) Histone H3 phosphorylation by IKK-Alpha is critical for cytokineinduced gene expression. Nature 423, 655-659
-
(2003)
Nature
, vol.423
, pp. 655-659
-
-
Yamamoto, Y.1
Verma, U.N.2
Prajapati, S.3
Kwak, Y.T.4
Gaynor, R.B.5
-
52
-
-
38149098408
-
Histone H2A monoubiquitination represses transcription by inhibiting RNA polymerase III transcriptional elongation
-
Zhou, W., Zhu, P., Wang, J., Pascual, G., Ohgi, K. A., Lozach, J., Glass, C. K., and Rosenfeld, M. G. (2008) Histone H2A monoubiquitination represses transcription by inhibiting RNA polymerase III transcriptional elongation. Mol. Cell 29, 69-80
-
(2008)
Mol. Cell
, vol.29
, pp. 69-80
-
-
Zhou, W.1
Zhu, P.2
Wang, J.3
Pascual, G.4
Ohgi, K.A.5
Lozach, J.6
Glass, C.K.7
Rosenfeld, M.G.8
-
53
-
-
70349443224
-
Transcriptional control of the inflammatory response
-
Medzhitov, R., and Horng, T. (2009) Transcriptional control of the inflammatory response. Nat. Rev. Immunol. 9, 692-703
-
(2009)
Nat. Rev. Immunol.
, vol.9
, pp. 692-703
-
-
Medzhitov, R.1
Horng, T.2
|