-
1
-
-
33745402414
-
A novel class of small RNAs bind to MILI protein in mouse testes
-
Aravin A, Gaidatzis D, Pfeffer S, Lagos-Quintana M, Landgraf P, Iovino N, Morris P, Brownstein MJ, Kuramochi-Miyagawa S, Nakano T, Chien M, Russo JJ, Ju J, Sheridan R, Sander C, Zavolan M, Tuschl T (2006) A novel class of small RNAs bind to MILI protein in mouse testes. Nature 442: 203-207
-
(2006)
Nature
, vol.442
, pp. 203-207
-
-
Aravin, A.1
Gaidatzis, D.2
Pfeffer, S.3
Lagos-Quintana, M.4
Landgraf, P.5
Iovino, N.6
Morris, P.7
Brownstein, M.J.8
Kuramochi-Miyagawa, S.9
Nakano, T.10
Chien, M.11
Russo, J.J.12
Ju, J.13
Sheridan, R.14
Sander, C.15
Zavolan, M.16
Tuschl, T.17
-
2
-
-
52049098967
-
A piRNA pathway primed by individual transposons is linked to de novo DNA methylation in mice
-
Aravin AA, Sachidanandam R, Bourc'his D, Schaefer C, Pezic D, Toth KF, Bestor T, Hannon GJ (2008) A piRNA pathway primed by individual transposons is linked to de novo DNA methylation in mice. Mol Cell 31: 785-799
-
(2008)
Mol Cell
, vol.31
, pp. 785-799
-
-
Aravin, A.A.1
Sachidanandam, R.2
Bourc'his, D.3
Schaefer, C.4
Pezic, D.5
Toth, K.F.6
Bestor, T.7
Hannon, G.J.8
-
3
-
-
34248160438
-
Developmentally regulated piRNA clusters implicate MILI in transposon control
-
Aravin AA, Sachidanandam R, Girard A, Fejes-Toth K, Hannon GJ (2007) Developmentally regulated piRNA clusters implicate MILI in transposon control. Science 316: 744-747
-
(2007)
Science
, vol.316
, pp. 744-747
-
-
Aravin, A.A.1
Sachidanandam, R.2
Girard, A.3
Fejes-Toth, K.4
Hannon, G.J.5
-
4
-
-
74249101368
-
Cytoplasmic compartmentalization of the fetal piRNA pathway in mice
-
Aravin AA, van der Heijden GW, Castaneda J, Vagin VV, Hannon GJ, Bortvin A (2009) Cytoplasmic compartmentalization of the fetal piRNA pathway in mice. PLoS Genet 5: e1000764
-
(2009)
PLoS Genet
, vol.5
-
-
Aravin, A.A.1
Van Der Heijden, G.W.2
Castaneda, J.3
Vagin, V.V.4
Hannon, G.J.5
Bortvin, A.6
-
5
-
-
84867086147
-
PiRNA biogenesis during adult spermatogenesis in mice is independent of the ping-pong mechanism
-
Beyret E, Liu N, Lin H (2012) piRNA biogenesis during adult spermatogenesis in mice is independent of the ping-pong mechanism. Cell Res 22: 1429-1439
-
(2012)
Cell Res
, vol.22
, pp. 1429-1439
-
-
Beyret, E.1
Liu, N.2
Lin, H.3
-
6
-
-
4544223707
-
Meiotic catastrophe and retrotransposon reactivation in male germ cells lacking Dnmt3L
-
Bourc'his D, Bestor TH (2004) Meiotic catastrophe and retrotransposon reactivation in male germ cells lacking Dnmt3L. Nature 431: 96-99
-
(2004)
Nature
, vol.431
, pp. 96-99
-
-
Bourc'his, D.1
Bestor, T.H.2
-
7
-
-
33947273235
-
Discrete small RNA-generating loci as master regulators of transposon activity in Drosophila
-
Brennecke J, Aravin AA, Stark A, Dus M, Kellis M, Sachidanandam R, Hannon GJ (2007) Discrete small RNA-generating loci as master regulators of transposon activity in Drosophila. Cell 128: 1089-1103
-
(2007)
Cell
, vol.128
, pp. 1089-1103
-
-
Brennecke, J.1
Aravin, A.A.2
Stark, A.3
Dus, M.4
Kellis, M.5
Sachidanandam, R.6
Hannon, G.J.7
-
9
-
-
33947720638
-
MIWI2 is essential for spermatogenesis and repression of transposons in the mouse male germline
-
Carmell MA, Girard A, van de Kant HJ, Bourc'his D, Bestor TH, de Rooij DG, Hannon GJ (2007) MIWI2 is essential for spermatogenesis and repression of transposons in the mouse male germline. Dev Cell 12: 503-514
-
(2007)
Dev Cell
, vol.12
, pp. 503-514
-
-
Carmell, M.A.1
Girard, A.2
Van De Kant, H.J.3
Bourc'his, D.4
Bestor, T.H.5
De Rooij, D.G.6
Hannon, G.J.7
-
10
-
-
73949084329
-
Mouse Piwi interactome identifies binding mechanism of Tdrkh Tudor domain to arginine methylated Miwi
-
Chen C, Jin J, James DA, Adams-Cioaba MA, Park JG, Guo Y, Tenaglia E, Xu C, Gish G, Min J, Pawson T (2009) Mouse Piwi interactome identifies binding mechanism of Tdrkh Tudor domain to arginine methylated Miwi. Proc Natl Acad Sci USA 106: 20336-20341
-
(2009)
Proc Natl Acad Sci USA
, vol.106
, pp. 20336-20341
-
-
Chen, C.1
Jin, J.2
James, D.A.3
Adams-Cioaba, M.A.4
Park, J.G.5
Guo, Y.6
Tenaglia, E.7
Xu, C.8
Gish, G.9
Min, J.10
Pawson, T.11
-
11
-
-
33750482567
-
Tdrd1/Mtr-1, a tudorrelated gene, is essential for male germ-cell differentiation and nuage/germinal granule formation in mice
-
Chuma S, Hosokawa M, Kitamura K, Kasai S, Fujioka M, Hiyoshi M, Takamune K, Noce T, Nakatsuji N (2006) Tdrd1/Mtr-1, a tudorrelated gene, is essential for male germ-cell differentiation and nuage/germinal granule formation in mice. Proc Natl Acad Sci USA 103: 15894-15899
-
(2006)
Proc Natl Acad Sci USA
, vol.103
, pp. 15894-15899
-
-
Chuma, S.1
Hosokawa, M.2
Kitamura, K.3
Kasai, S.4
Fujioka, M.5
Hiyoshi, M.6
Takamune, K.7
Noce, T.8
Nakatsuji, N.9
-
12
-
-
33747877558
-
Mouse MAELSTROM: The link between meiotic silencing of unsynapsed chromatin and microRNA pathway?
-
Costa Y, Speed RM, Gautier P, Semple CA, Maratou K, Turner JM, Cooke HJ (2006) Mouse MAELSTROM: the link between meiotic silencing of unsynapsed chromatin and microRNA pathway? Hum Mol Genet 15: 2324-2334
-
(2006)
Hum Mol Genet
, vol.15
, pp. 2324-2334
-
-
Costa, Y.1
Speed, R.M.2
Gautier, P.3
Semple, C.A.4
Maratou, K.5
Turner, J.M.6
Cooke, H.J.7
-
13
-
-
0032443562
-
A novel class of evolutionarily conserved genes defined by piwi are essential for stem cell self-renewal
-
Cox DN, Chao A, Baker J, Chang L, Qiao D, Lin H (1998) A novel class of evolutionarily conserved genes defined by piwi are essential for stem cell self-renewal. Genes Dev 12: 3715-3727
-
(1998)
Genes Dev
, vol.12
, pp. 3715-3727
-
-
Cox, D.N.1
Chao, A.2
Baker, J.3
Chang, L.4
Qiao, D.5
Lin, H.6
-
14
-
-
83055180736
-
The endonuclease activity of Mili fuels piRNA amplification that silences LINE1 elements
-
De Fazio S, Bartonicek N, Di Giacomo M, Abreu-Goodger C, Sankar A, Funaya C, Antony C, Moreira PN, Enright AJ, O'Carroll D (2011) The endonuclease activity of Mili fuels piRNA amplification that silences LINE1 elements. Nature 480: 259-263
-
(2011)
Nature
, vol.480
, pp. 259-263
-
-
De Fazio, S.1
Bartonicek, N.2
Di Giacomo, M.3
Abreu-Goodger, C.4
Sankar, A.5
Funaya, C.6
Antony, C.7
Moreira, P.N.8
Enright, A.J.9
O'carroll, D.10
-
15
-
-
0036083480
-
Miwi, a murine homolog of piwi, encodes a cytoplasmic protein essential for spermatogenesis
-
Deng W, Lin H (2002) miwi, a murine homolog of piwi, encodes a cytoplasmic protein essential for spermatogenesis. Dev Cell 2: 819-830
-
(2002)
Dev Cell
, vol.2
, pp. 819-830
-
-
Deng, W.1
Lin, H.2
-
16
-
-
77955409741
-
MOV10L1 is necessary for protection of spermatocytes against retrotransposons by Piwi-interacting RNAs
-
Frost RJ, Hamra FK, Richardson JA, Qi X, Bassel-Duby R, Olson EN (2010) MOV10L1 is necessary for protection of spermatocytes against retrotransposons by Piwi-interacting RNAs. Proc Natl Acad Sci USA 107: 11847-11852
-
(2010)
Proc Natl Acad Sci USA
, vol.107
, pp. 11847-11852
-
-
Frost, R.J.1
Hamra, F.K.2
Richardson, J.A.3
Qi, X.4
Bassel-Duby, R.5
Olson, E.N.6
-
17
-
-
33745336617
-
A germline-specific class of small RNAs binds mammalian Piwi proteins
-
Girard A, Sachidanandam R, Hannon GJ, Carmell MA (2006) A germline-specific class of small RNAs binds mammalian Piwi proteins. Nature 442: 199-202
-
(2006)
Nature
, vol.442
, pp. 199-202
-
-
Girard, A.1
Sachidanandam, R.2
Hannon, G.J.3
Carmell, M.A.4
-
18
-
-
33745621037
-
A novel class of small RNAs in mouse spermatogenic cells
-
Grivna ST, Beyret E, Wang Z, Lin H (2006a) A novel class of small RNAs in mouse spermatogenic cells. Genes Dev 20: 1709-1714
-
(2006)
Genes Dev
, vol.20
, pp. 1709-1714
-
-
Grivna, S.T.1
Beyret, E.2
Wang, Z.3
Lin, H.4
-
19
-
-
33748602389
-
MIWI associates with translational machinery and PIWI-interacting RNAs (piRNAs) in regulating spermatogenesis
-
Grivna ST, Pyhtila B, Lin H (2006b) MIWI associates with translational machinery and PIWI-interacting RNAs (piRNAs) in regulating spermatogenesis. Proc Natl Acad Sci USA 103: 13415-13420
-
(2006)
Proc Natl Acad Sci USA
, vol.103
, pp. 13415-13420
-
-
Grivna, S.T.1
Pyhtila, B.2
Lin, H.3
-
20
-
-
33947390781
-
A slicer-mediated mechanism for repeat-associated siRNA 50 end formation in Drosophila
-
Gunawardane LS, Saito K, Nishida KM, Miyoshi K, Kawamura Y, Nagami T, Siomi H, Siomi MC (2007) A slicer-mediated mechanism for repeat-associated siRNA 50 end formation in Drosophila. Science 315: 1587-1590
-
(2007)
Science
, vol.315
, pp. 1587-1590
-
-
Gunawardane, L.S.1
Saito, K.2
Nishida, K.M.3
Miyoshi, K.4
Kawamura, Y.5
Nagami, T.6
Siomi, H.7
Siomi, M.C.8
-
21
-
-
34447291602
-
The Drosophila RNA methyltransferase, DmHen1, modifies germline piRNAs and single-stranded siRNAs in RISC
-
Horwich MD, Li C, Matranga C, Vagin V, Farley G, Wang P, Zamore PD (2007) The Drosophila RNA methyltransferase, DmHen1, modifies germline piRNAs and single-stranded siRNAs in RISC. Curr Biol 17: 1265-1272
-
(2007)
Curr Biol
, vol.17
, pp. 1265-1272
-
-
Horwich, M.D.1
Li, C.2
Matranga, C.3
Vagin, V.4
Farley, G.5
Wang, P.6
Zamore, P.D.7
-
22
-
-
79952509006
-
PiRNA-associated germline nuage formation and spermatogenesis require MitoPLD profusogenic mitochondrial-surface lipid signaling
-
Huang H, Gao Q, Peng X, Choi SY, Sarma K, Ren H, Morris AJ, Frohman MA (2011a) piRNA-associated germline nuage formation and spermatogenesis require MitoPLD profusogenic mitochondrial-surface lipid signaling. Dev Cell 20: 376-387
-
(2011)
Dev Cell
, vol.20
, pp. 376-387
-
-
Huang, H.1
Gao, Q.2
Peng, X.3
Choi, S.Y.4
Sarma, K.5
Ren, H.6
Morris, A.J.7
Frohman, M.A.8
-
23
-
-
80053583080
-
Tdrd1 acts as a molecular scaffold for Piwi proteins and piRNA targets in zebrafish
-
Huang HY, Houwing S, Kaaij LJ, Meppelink A, Redl S, Gauci S, Vos H, Draper BW, Moens CB, Burgering BM, Ladurner P, Krijgsveld J, Berezikov E, Ketting RF (2011b) Tdrd1 acts as a molecular scaffold for Piwi proteins and piRNA targets in zebrafish. EMBO J 30: 3298-3308
-
(2011)
EMBO J
, vol.30
, pp. 3298-3308
-
-
Huang, H.Y.1
Houwing, S.2
Kaaij, L.J.3
Meppelink, A.4
Redl, S.5
Gauci, S.6
Vos, H.7
Draper, B.W.8
Moens, C.B.9
Burgering, B.M.10
Ladurner, P.11
Krijgsveld, J.12
Berezikov, E.13
Ketting, R.F.14
-
24
-
-
84875256553
-
A major epigenetic programming mechanism guided by piRNAs
-
Huang XA, Yin H, Sweeney S, Raha D, Snyder M, Lin H (2013) A major epigenetic programming mechanism guided by piRNAs. Dev Cell 24: 502-516
-
(2013)
Dev Cell
, vol.24
, pp. 502-516
-
-
Huang, X.A.1
Yin, H.2
Sweeney, S.3
Raha, D.4
Snyder, M.5
Lin, H.6
-
25
-
-
84868613084
-
The structural biochemistry of Zucchini implicates it as a nuclease in piRNA biogenesis
-
Ipsaro JJ, Haase AD, Knott SR, Joshua-Tor L, Hannon GJ (2012) The structural biochemistry of Zucchini implicates it as a nuclease in piRNA biogenesis. Nature 491: 279-283
-
(2012)
Nature
, vol.491
, pp. 279-283
-
-
Ipsaro, J.J.1
Haase, A.D.2
Knott, S.R.3
Joshua-Tor, L.4
Hannon, G.J.5
-
26
-
-
78650084827
-
Meiotic errors activate checkpoints that improve gamete quality without triggering apoptosis in male germ cells
-
Jaramillo-Lambert A, Harigaya Y, Vitt J, Villeneuve A, Engebrecht J (2010) Meiotic errors activate checkpoints that improve gamete quality without triggering apoptosis in male germ cells. Curr Biol 20: 2078-2089
-
(2010)
Curr Biol
, vol.20
, pp. 2078-2089
-
-
Jaramillo-Lambert, A.1
Harigaya, Y.2
Vitt, J.3
Villeneuve, A.4
Engebrecht, J.5
-
27
-
-
80052991624
-
30 end formation of PIWI-interacting RNAs in vitro
-
Kawaoka S, Izumi N, Katsuma S, Tomari Y (2011) 30 end formation of PIWI-interacting RNAs in vitro. Mol Cell 43: 1015-1022
-
(2011)
Mol Cell
, vol.43
, pp. 1015-1022
-
-
Kawaoka, S.1
Izumi, N.2
Katsuma, S.3
Tomari, Y.4
-
28
-
-
67349281394
-
Arginine methylation of Piwi proteins catalysed by dPRMT5 is required for Ago3 and Aub stability
-
Kirino Y, Kim N, de Planell-Saguer M, Khandros E, Chiorean S, Klein PS, Rigoutsos I, Jongens TA, Mourelatos Z (2009) Arginine methylation of Piwi proteins catalysed by dPRMT5 is required for Ago3 and Aub stability. Nat Cell Biol 11: 652-658
-
(2009)
Nat Cell Biol
, vol.11
, pp. 652-658
-
-
Kirino, Y.1
Kim, N.2
De Planell-Saguer, M.3
Khandros, E.4
Chiorean, S.5
Klein, P.S.6
Rigoutsos, I.7
Jongens, T.A.8
Mourelatos, Z.9
-
29
-
-
34247259831
-
Mouse Piwi-interacting RNAs are 20-O-methylated at their 30 termini
-
Kirino Y, Mourelatos Z (2007a) Mouse Piwi-interacting RNAs are 20-O-methylated at their 30 termini. Nat Struct Mol Biol 14: 347-348
-
(2007)
Nat Struct Mol Biol
, vol.14
, pp. 347-348
-
-
Kirino, Y.1
Mourelatos, Z.2
-
30
-
-
34548366485
-
The mouse homolog of HEN1 is a potential methylase for Piwi-interacting RNAs
-
Kirino Y, Mourelatos Z (2007b) The mouse homolog of HEN1 is a potential methylase for Piwi-interacting RNAs. RNA 13: 1397-1401
-
(2007)
RNA
, vol.13
, pp. 1397-1401
-
-
Kirino, Y.1
Mourelatos, Z.2
-
31
-
-
10744223519
-
Mili, a mammalian member of piwi family gene, is essential for spermatogenesis
-
Kuramochi-Miyagawa S, Kimura T, Ijiri TW, Isobe T, Asada N, Fujita Y, Ikawa M, Iwai N, Okabe M, Deng W, Lin H, Matsuda Y, Nakano T (2004) Mili, a mammalian member of piwi family gene, is essential for spermatogenesis. Development 131: 839-849
-
(2004)
Development
, vol.131
, pp. 839-849
-
-
Kuramochi-Miyagawa, S.1
Kimura, T.2
Ijiri, T.W.3
Isobe, T.4
Asada, N.5
Fujita, Y.6
Ikawa, M.7
Iwai, N.8
Okabe, M.9
Deng, W.10
Lin, H.11
Matsuda, Y.12
Nakano, T.13
-
32
-
-
41649116098
-
DNA methylation of retrotransposon genes is regulated by Piwi family members MILI and MIWI2 in murine fetal testes
-
Kuramochi-Miyagawa S, Watanabe T, Gotoh K, Totoki Y, Toyoda A, Ikawa M, Asada N, Kojima K, Yamaguchi Y, Ijiri TW, Hata K, Li E, Matsuda Y, Kimura T, Okabe M, Sakaki Y, Sasaki H, Nakano T (2008) DNA methylation of retrotransposon genes is regulated by Piwi family members MILI and MIWI2 in murine fetal testes. Genes Dev 22: 908-917
-
(2008)
Genes Dev
, vol.22
, pp. 908-917
-
-
Kuramochi-Miyagawa, S.1
Watanabe, T.2
Gotoh, K.3
Totoki, Y.4
Toyoda, A.5
Ikawa, M.6
Asada, N.7
Kojima, K.8
Yamaguchi, Y.9
Ijiri, T.W.10
Hata, K.11
Li, E.12
Matsuda, Y.13
Kimura, T.14
Okabe, M.15
Sakaki, Y.16
Sasaki, H.17
Nakano, T.18
-
33
-
-
33746527679
-
Characterization of the piRNA complex from rat testes
-
Lau NC, Seto AG, Kim J, Kuramochi-Miyagawa S, Nakano T, Bartel DP, Kingston RE (2006) Characterization of the piRNA complex from rat testes. Science 313: 363-367
-
(2006)
Science
, vol.313
, pp. 363-367
-
-
Lau, N.C.1
Seto, A.G.2
Kim, J.3
Kuramochi-Miyagawa, S.4
Nakano, T.5
Bartel, D.P.6
Kingston, R.E.7
-
34
-
-
68549085526
-
A novel epigenetic mechanism in drosophila somatic cells mediated by PIWI and piRNAs
-
Lin H, Yin H (2008) A Novel Epigenetic Mechanism in Drosophila Somatic Cells Mediated by PIWI and piRNAs. Cold Spring Harb Symp Quant Biol 73: 273-281
-
(2008)
Cold Spring Harb Symp Quant Biol
, vol.73
, pp. 273-281
-
-
Lin, H.1
Yin, H.2
-
35
-
-
78649842259
-
Structural basis for recognition of arginine methylated Piwi proteins by the extended Tudor domain
-
Liu K, Chen C, Guo Y, Lam R, Bian C, Xu C, Zhao DY, Jin J, MacKenzie F, Pawson T, Min J (2010) Structural basis for recognition of arginine methylated Piwi proteins by the extended Tudor domain. Proc Natl Acad Sci USA 107: 18398-18403
-
(2010)
Proc Natl Acad Sci USA
, vol.107
, pp. 18398-18403
-
-
Liu, K.1
Chen, C.2
Guo, Y.3
Lam, R.4
Bian, C.5
Xu, C.6
Zhao, D.Y.7
Jin, J.8
Mackenzie, F.9
Pawson, T.10
Min, J.11
-
36
-
-
79955366604
-
PAPI, a novel TUDOR-domain protein, complexes with AGO3, ME31B and TRAL in the nuage to silence transposition
-
Liu L, Qi H, Wang J, Lin H (2011) PAPI, a novel TUDOR-domain protein, complexes with AGO3, ME31B and TRAL in the nuage to silence transposition. Development 138: 1863-1873
-
(2011)
Development
, vol.138
, pp. 1863-1873
-
-
Liu, L.1
Qi, H.2
Wang, J.3
Lin, H.4
-
37
-
-
84867667939
-
The multiple Tudor domain-containing protein TDRD1 is a molecular scaffold for mouse Piwi proteins and piRNA biogenesis factors
-
Mathioudakis N, Palencia A, Kadlec J, Round A, Tripsianes K, Sattler M, Pillai RS, Cusack S (2012) The multiple Tudor domain-containing protein TDRD1 is a molecular scaffold for mouse Piwi proteins and piRNA biogenesis factors. RNA 18: 2056-2072
-
(2012)
RNA
, vol.18
, pp. 2056-2072
-
-
Mathioudakis, N.1
Palencia, A.2
Kadlec, J.3
Round, A.4
Tripsianes, K.5
Sattler, M.6
Pillai, R.S.7
Cusack, S.8
-
38
-
-
84868626090
-
Structure and function of Zucchini endoribonuclease in piRNA biogenesis
-
Nishimasu H, Ishizu H, Saito K, Fukuhara S, Kamatani MK, Bonnefond L, Matsumoto N, Nishizawa T, Nakanaga K, Aoki J, Ishitani R, Siomi H, Siomi MC, Nureki O (2012) Structure and function of Zucchini endoribonuclease in piRNA biogenesis. Nature 491: 284-287
-
(2012)
Nature
, vol.491
, pp. 284-287
-
-
Nishimasu, H.1
Ishizu, H.2
Saito, K.3
Fukuhara, S.4
Kamatani, M.K.5
Bonnefond, L.6
Matsumoto, N.7
Nishizawa, T.8
Nakanaga, K.9
Aoki, J.10
Ishitani, R.11
Siomi, H.12
Siomi, M.C.13
Nureki, O.14
-
39
-
-
34247199896
-
The 30 termini of mouse Piwi-interacting RNAs are 20-O-methylated
-
Ohara T, Sakaguchi Y, Suzuki T, Ueda H, Miyauchi K (2007) The 30 termini of mouse Piwi-interacting RNAs are 20-O-methylated. Nat Struct Mol Biol 14: 349-350
-
(2007)
Nat Struct Mol Biol
, vol.14
, pp. 349-350
-
-
Ohara, T.1
Sakaguchi, Y.2
Suzuki, T.3
Ueda, H.4
Miyauchi, K.5
-
40
-
-
77957793321
-
An in vivo RNAi assay identifies major genetic and cellular requirements for primary piRNA biogenesis in Drosophila
-
Olivieri D, Sykora MM, Sachidanandam R, Mechtler K, Brennecke J (2010) An in vivo RNAi assay identifies major genetic and cellular requirements for primary piRNA biogenesis in Drosophila. EMBO J 29: 3301-3317
-
(2010)
EMBO J
, vol.29
, pp. 3301-3317
-
-
Olivieri, D.1
Sykora, M.M.2
Sachidanandam, R.3
Mechtler, K.4
Brennecke, J.5
-
41
-
-
84871375161
-
Novel Features of a PIWI-Like Protein Homolog in the Parasitic Protozoan Leishmania
-
Padmanabhan PK, Dumas C, Samant M, Rochette A, Simard MJ, Papadopoulou B (2012) Novel Features of a PIWI-Like Protein Homolog in the Parasitic Protozoan Leishmania. PLoS One 7: e52612
-
(2012)
PLoS One
, vol.7
-
-
Padmanabhan, P.K.1
Dumas, C.2
Samant, M.3
Rochette, A.4
Simard, M.J.5
Papadopoulou, B.6
-
42
-
-
46349103594
-
A mitochondrial protein compendium elucidates complex i disease biology
-
Pagliarini DJ, Calvo SE, Chang B, Sheth SA, Vafai SB, Ong SE, Walford GA, Sugiana C, Boneh A, Chen WK, Hill DE, Vidal M, Evans JG, Thorburn DR, Carr SA, Mootha VK (2008) A mitochondrial protein compendium elucidates complex I disease biology. Cell 134: 112-123
-
(2008)
Cell
, vol.134
, pp. 112-123
-
-
Pagliarini, D.J.1
Calvo, S.E.2
Chang, B.3
Sheth, S.A.4
Vafai, S.B.5
Ong, S.E.6
Walford, G.A.7
Sugiana, C.8
Boneh, A.9
Chen, W.K.10
Hill, D.E.11
Vidal, M.12
Evans, J.G.13
Thorburn, D.R.14
Carr, S.A.15
Mootha, V.K.16
-
43
-
-
79952792594
-
The Yb body, a major site for Piwi-associated RNA biogenesis and a gateway for Piwi expression and transport to the nucleus in somatic cells
-
Qi H, Watanabe T, Ku HY, Liu N, Zhong M, Lin H (2010) The Yb body, a major site for Piwi-associated RNA biogenesis and a gateway for Piwi expression and transport to the nucleus in somatic cells. J Biol Chem 286: 3789-3797
-
(2010)
J Biol Chem
, vol.286
, pp. 3789-3797
-
-
Qi, H.1
Watanabe, T.2
Ku, H.Y.3
Liu, N.4
Zhong, M.5
Lin, H.6
-
44
-
-
83055193640
-
Miwi catalysis is required for piRNA amplification-independent LINE1 transposon silencing
-
Reuter M, Berninger P, Chuma S, Shah H, Hosokawa M, Funaya C, Antony C, Sachidanandam R, Pillai RS (2011) Miwi catalysis is required for piRNA amplification-independent LINE1 transposon silencing. Nature 480: 264-267
-
(2011)
Nature
, vol.480
, pp. 264-267
-
-
Reuter, M.1
Berninger, P.2
Chuma, S.3
Shah, H.4
Hosokawa, M.5
Funaya, C.6
Antony, C.7
Sachidanandam, R.8
Pillai, R.S.9
-
45
-
-
67349141725
-
Loss of the Mili-interacting Tudor domain-containing protein-1 activates transposons and alters the Mili-associated small RNA profile
-
Reuter M, Chuma S, Tanaka T, Franz T, Stark A, Pillai RS (2009) Loss of the Mili-interacting Tudor domain-containing protein-1 activates transposons and alters the Mili-associated small RNA profile. Nat Struct Mol Biol 16: 63946
-
(2009)
Nat Struct Mol Biol
, vol.16
, pp. 63946
-
-
Reuter, M.1
Chuma, S.2
Tanaka, T.3
Franz, T.4
Stark, A.5
Pillai, R.S.6
-
46
-
-
72649094955
-
A broadly conserved pathway generates 30UTR-directed primary piRNAs
-
Robine N, Lau NC, Balla S, Jin Z, Okamura K, Kuramochi-Miyagawa S, Blower MD, Lai EC (2009) A broadly conserved pathway generates 30UTR-directed primary piRNAs. Curr Biol 19: 2066-2076
-
(2009)
Curr Biol
, vol.19
, pp. 2066-2076
-
-
Robine, N.1
Lau, N.C.2
Balla, S.3
Jin, Z.4
Okamura, K.5
Kuramochi-Miyagawa, S.6
Blower, M.D.7
Lai, E.C.8
-
47
-
-
78049387387
-
Maternal mRNA deadenylation and decay by the piRNA pathway in the early Drosophila embryo
-
Rouget C, Papin C, Boureux A, Meunier AC, Franco B, Robine N, Lai EC, Pelisson A, Simonelig M (2010) Maternal mRNA deadenylation and decay by the piRNA pathway in the early Drosophila embryo. Nature 467: 1128-1132
-
(2010)
Nature
, vol.467
, pp. 1128-1132
-
-
Rouget, C.1
Papin, C.2
Boureux, A.3
Meunier, A.C.4
Franco, B.5
Robine, N.6
Lai, E.C.7
Pelisson, A.8
Simonelig, M.9
-
48
-
-
70449519397
-
A regulatory circuit for piwi by the large Maf gene traffic jam in Drosophila
-
Saito K, Inagaki S, Mituyama T, Kawamura Y, Ono Y, Sakota E, Kotani H, Asai K, Siomi H, Siomi MC (2009) A regulatory circuit for piwi by the large Maf gene traffic jam in Drosophila. Nature 461: 1296-1299
-
(2009)
Nature
, vol.461
, pp. 1296-1299
-
-
Saito, K.1
Inagaki, S.2
Mituyama, T.3
Kawamura, Y.4
Ono, Y.5
Sakota, E.6
Kotani, H.7
Asai, K.8
Siomi, H.9
Siomi, M.C.10
-
49
-
-
78149478349
-
Roles for the Yb body components Armitage and Yb in primary piRNA biogenesis in Drosophila
-
Saito K, Ishizu H, Komai M, Kotani H, Kawamura Y, Nishida KM, Siomi H, Siomi MC (2010) Roles for the Yb body components Armitage and Yb in primary piRNA biogenesis in Drosophila. Genes Dev 24: 2493-2498
-
(2010)
Genes Dev
, vol.24
, pp. 2493-2498
-
-
Saito, K.1
Ishizu, H.2
Komai, M.3
Kotani, H.4
Kawamura, Y.5
Nishida, K.M.6
Siomi, H.7
Siomi, M.C.8
-
50
-
-
34347378274
-
Pimet, the Drosophila homolog of HEN1, mediates 20-O-methylation of Piwiinteracting RNAs at their 30 ends
-
Saito K, Sakaguchi Y, Suzuki T, Siomi H, Siomi MC (2007) Pimet, the Drosophila homolog of HEN1, mediates 20-O-methylation of Piwiinteracting RNAs at their 30 ends. Genes Dev 21: 1603-1608
-
(2007)
Genes Dev
, vol.21
, pp. 1603-1608
-
-
Saito, K.1
Sakaguchi, Y.2
Suzuki, T.3
Siomi, H.4
Siomi, M.C.5
-
51
-
-
81255188693
-
Maelstrom coordinates microtubule organization during Drosophila oogenesis through interaction with components of the MTOC
-
Sato K, Nishida KM, Shibuya A, Siomi MC, Siomi H (2011) Maelstrom coordinates microtubule organization during Drosophila oogenesis through interaction with components of the MTOC. Genes Dev 25: 2361-2373
-
(2011)
Genes Dev
, vol.25
, pp. 2361-2373
-
-
Sato, K.1
Nishida, K.M.2
Shibuya, A.3
Siomi, M.C.4
Siomi, H.5
-
52
-
-
71649101009
-
The TDRD9-MIWI2 complex is essential for piRNA-mediated retrotransposon silencing in the mouse male germline
-
Shoji M, Tanaka T, Hosokawa M, Reuter M, Stark A, Kato Y, Kondoh G, Okawa K, Chujo T, Suzuki T, Hata K, Martin SL, Noce T, Kuramochi-Miyagawa S, Nakano T, Sasaki H, Pillai RS, Nakatsuji N, Chuma S (2009) The TDRD9-MIWI2 complex is essential for piRNA-mediated retrotransposon silencing in the mouse male germline. Dev Cell 17: 775-787
-
(2009)
Dev Cell
, vol.17
, pp. 775-787
-
-
Shoji, M.1
Tanaka, T.2
Hosokawa, M.3
Reuter, M.4
Stark, A.5
Kato, Y.6
Kondoh, G.7
Okawa, K.8
Chujo, T.9
Suzuki, T.10
Hata, K.11
Martin, S.L.12
Noce, T.13
Kuramochi-Miyagawa, S.14
Nakano, T.15
Sasaki, H.16
Pillai, R.S.17
Nakatsuji, N.18
Chuma, S.19
-
54
-
-
48549092573
-
Mouse maelstrom, a component of nuage, is essential for spermatogenesis and transposon repression in meiosis
-
Soper SF, van der Heijden GW, Hardiman TC, Goodheart M, Martin SL, de Boer P, Bortvin A (2008) Mouse maelstrom, a component of nuage, is essential for spermatogenesis and transposon repression in meiosis. Dev Cell 15: 285-297
-
(2008)
Dev Cell
, vol.15
, pp. 285-297
-
-
Soper, S.F.1
Van Der Heijden, G.W.2
Hardiman, T.C.3
Goodheart, M.4
Martin, S.L.5
De Boer, P.6
Bortvin, A.7
-
55
-
-
79960572781
-
Tudor domain containing 7 (Tdrd7) is essential for dynamic ribonucleoprotein (RNP) remodeling of chromatoid bodies during spermatogenesis
-
Tanaka T, Hosokawa M, Vagin VV, Reuter M, Hayashi E, Mochizuki AL, Kitamura K, Yamanaka H, Kondoh G, Okawa K, Kuramochi-Miyagawa S, Nakano T, Sachidanandam R, Hannon GJ, Pillai RS, Nakatsuji N, Chuma S (2011) Tudor domain containing 7 (Tdrd7) is essential for dynamic ribonucleoprotein (RNP) remodeling of chromatoid bodies during spermatogenesis. Proc Natl Acad Sci USA 108: 10579-10584
-
(2011)
Proc Natl Acad Sci USA
, vol.108
, pp. 10579-10584
-
-
Tanaka, T.1
Hosokawa, M.2
Vagin, V.V.3
Reuter, M.4
Hayashi, E.5
Mochizuki, A.L.6
Kitamura, K.7
Yamanaka, H.8
Kondoh, G.9
Okawa, K.10
Kuramochi-Miyagawa, S.11
Nakano, T.12
Sachidanandam, R.13
Hannon, G.J.14
Pillai, R.S.15
Nakatsuji, N.16
Chuma, S.17
-
56
-
-
70350238350
-
The biogenesis and function of PIWI Proteins and piRNAs: Progress and prospect
-
Thomson T, Lin H (2009) The biogenesis and function of PIWI Proteins and piRNAs: progress and prospect. Annu Rev Cell Dev Biol 25: 355-376
-
(2009)
Annu Rev Cell Dev Biol
, vol.25
, pp. 355-376
-
-
Thomson, T.1
Lin, H.2
-
57
-
-
65049086952
-
MILI, a PIWI-interacting RNA-binding protein, is required for germline stem cell self-renewal and appears to positively regulate translation
-
Unhavaithaya Y, Hao Y, Beyret E, Yin H, Kuramochi-Miyagawa S, Nakano T, Lin H (2009) MILI, a PIWI-interacting RNA-binding protein, is required for germline stem cell self-renewal and appears to positively regulate translation. J Biol Chem 284: 6507-6519
-
(2009)
J Biol Chem
, vol.284
, pp. 6507-6519
-
-
Unhavaithaya, Y.1
Hao, Y.2
Beyret, E.3
Yin, H.4
Kuramochi-Miyagawa, S.5
Nakano, T.6
Lin, H.7
-
58
-
-
68149164399
-
Proteomic analysis of murine Piwi proteins reveals a role for arginine methylation in specifying interaction with Tudor family members
-
Vagin VV, Wohlschlegel J, Qu J, Jonsson Z, Huang X, Chuma S, Girard A, Sachidanandam R, Hannon GJ, Aravin AA (2009) Proteomic analysis of murine Piwi proteins reveals a role for arginine methylation in specifying interaction with Tudor family members. Genes Dev 23: 1749-1762
-
(2009)
Genes Dev
, vol.23
, pp. 1749-1762
-
-
Vagin, V.V.1
Wohlschlegel, J.2
Qu, J.3
Jonsson, Z.4
Huang, X.5
Chuma, S.6
Girard, A.7
Sachidanandam, R.8
Hannon, G.J.9
Aravin, A.A.10
-
59
-
-
65049090424
-
Tdrd6 is required for spermiogenesis, chromatoid body architecture, and regulation of miRNA expression
-
Vasileva A, Tiedau D, Firooznia A, Muller-Reichert T, Jessberger R (2009) Tdrd6 is required for spermiogenesis, chromatoid body architecture, and regulation of miRNA expression. Curr Biol 19: 630-639
-
(2009)
Curr Biol
, vol.19
, pp. 630-639
-
-
Vasileva, A.1
Tiedau, D.2
Firooznia, A.3
Muller-Reichert, T.4
Jessberger, R.5
-
60
-
-
84864643089
-
Mili and Miwi target RNA repertoire reveals piRNA biogenesis and function of Miwi in spermiogenesis
-
Vourekas A, Zheng Q, Alexiou P, Maragkakis M, Kirino Y, Gregory BD, Mourelatos Z (2011) Mili and Miwi target RNA repertoire reveals piRNA biogenesis and function of Miwi in spermiogenesis. Nat Struct Mol Biol 19: 773-781
-
(2011)
Nat Struct Mol Biol
, vol.19
, pp. 773-781
-
-
Vourekas, A.1
Zheng, Q.2
Alexiou, P.3
Maragkakis, M.4
Kirino, Y.5
Gregory, B.D.6
Mourelatos, Z.7
-
61
-
-
65049088735
-
Mili interacts with tudor domain-containing protein 1 in regulating spermatogenesis
-
Wang J, Saxe JP, Tanaka T, Chuma S, Lin H (2009) Mili interacts with tudor domain-containing protein 1 in regulating spermatogenesis. Curr Biol 19: 640-644
-
(2009)
Curr Biol
, vol.19
, pp. 640-644
-
-
Wang, J.1
Saxe, J.P.2
Tanaka, T.3
Chuma, S.4
Lin, H.5
-
62
-
-
79952525007
-
MITOPLD is a mitochondrial protein essential for nuage formation and piRNA biogenesis in the mouse germline
-
Watanabe T, Chuma S, Yamamoto Y, Kuramochi-Miyagawa S, Totoki Y, Toyoda A, Hoki Y, Fujiyama A, Shibata T, Sado T, Noce T, Nakano T, Nakatsuji N, Lin H, Sasaki H (2011a) MITOPLD is a mitochondrial protein essential for nuage formation and piRNA biogenesis in the mouse germline. Dev Cell 20: 364-375
-
(2011)
Dev Cell
, vol.20
, pp. 364-375
-
-
Watanabe, T.1
Chuma, S.2
Yamamoto, Y.3
Kuramochi-Miyagawa, S.4
Totoki, Y.5
Toyoda, A.6
Hoki, Y.7
Fujiyama, A.8
Shibata, T.9
Sado, T.10
Noce, T.11
Nakano, T.12
Nakatsuji, N.13
Lin, H.14
Sasaki, H.15
-
63
-
-
79956052873
-
Role for piRNAs and noncoding RNA in de novo DNA methylation of the imprinted mouse Rasgrf1 locus
-
Watanabe T, Tomizawa S, Mitsuya K, Totoki Y, Yamamoto Y, Kuramochi-Miyagawa S, Iida N, Hoki Y, Murphy PJ, Toyoda A, Gotoh K, Hiura H, Arima T, Fujiyama A, Sado T, Shibata T, Nakano T, Lin H, Ichiyanagi K, Soloway PD et al. (2011b) Role for piRNAs and noncoding RNA in de novo DNA methylation of the imprinted mouse Rasgrf1 locus. Science 332: 848-852
-
(2011)
Science
, vol.332
, pp. 848-852
-
-
Watanabe, T.1
Tomizawa, S.2
Mitsuya, K.3
Totoki, Y.4
Yamamoto, Y.5
Kuramochi-Miyagawa, S.6
Iida, N.7
Hoki, Y.8
Murphy, P.J.9
Toyoda, A.10
Gotoh, K.11
Hiura, H.12
Arima, T.13
Fujiyama, A.14
Sado, T.15
Shibata, T.16
Nakano, T.17
Lin, H.18
Ichiyanagi, K.19
Soloway, P.D.20
more..
-
64
-
-
68149153185
-
MIWI-independent small RNAs (MSY-RNAs) bind to the RNA-binding protein, MSY2, in male germ cells
-
Xu M, Medvedev S, Yang J, Hecht NB (2009) MIWI-independent small RNAs (MSY-RNAs) bind to the RNA-binding protein, MSY2, in male germ cells. Proc Natl Acad Sci USA 106: 12371-12376
-
(2009)
Proc Natl Acad Sci USA
, vol.106
, pp. 12371-12376
-
-
Xu, M.1
Medvedev, S.2
Yang, J.3
Hecht, N.B.4
-
65
-
-
79952375230
-
TDRD5 is required for retrotransposon silencing, chromatoid body assembly, and spermiogenesis in mice
-
Yabuta Y, Ohta H, Abe T, Kurimoto K, Chuma S, Saitou M (2011) TDRD5 is required for retrotransposon silencing, chromatoid body assembly, and spermiogenesis in mice. J Cell Biol 192: 781-795
-
(2011)
J Cell Biol
, vol.192
, pp. 781-795
-
-
Yabuta, Y.1
Ohta, H.2
Abe, T.3
Kurimoto, K.4
Chuma, S.5
Saitou, M.6
-
66
-
-
77955406478
-
Mouse MOV10L1 associates with Piwi proteins and is an essential component of the Piwi-interacting RNA (piRNA) pathway
-
Zheng K, Xiol J, Reuter M, Eckardt S, Leu NA, McLaughlin KJ, Stark A, Sachidanandam R, Pillai RS, Wang PJ (2010) Mouse MOV10L1 associates with Piwi proteins and is an essential component of the Piwi-interacting RNA (piRNA) pathway. Proc Natl Acad Sci USA 107: 11841-11846
-
(2010)
Proc Natl Acad Sci USA
, vol.107
, pp. 11841-11846
-
-
Zheng, K.1
Xiol, J.2
Reuter, M.3
Eckardt, S.4
Leu, N.A.5
McLaughlin, K.J.6
Stark, A.7
Sachidanandam, R.8
Pillai, R.S.9
Wang, P.J.10
|