-
1
-
-
77951877448
-
Prevalence of transmitted drug resistance associated mutations and HIV-1 subtypes in new HIV-1 diagnoses, U.S.-2006
-
Wheeler, W. H., Ziebell, R. A., Zabina, H., Pieniazek, D., Prejean, J., Bodnar, U. R., Mahle, K. C., Heneine, W., Johnson, J. A., and Hall, H. I. (2010) Prevalence of transmitted drug resistance associated mutations and HIV-1 subtypes in new HIV-1 diagnoses, U.S.-2006 AIDS 24, 1203-1212
-
(2010)
AIDS
, vol.24
, pp. 1203-1212
-
-
Wheeler, W.H.1
Ziebell, R.A.2
Zabina, H.3
Pieniazek, D.4
Prejean, J.5
Bodnar, U.R.6
Mahle, K.C.7
Heneine, W.8
Johnson, J.A.9
Hall, H.I.10
-
2
-
-
79451471817
-
-
UNAIDS. (2010), Joint United Nations Programme on HIV/AIDS (UNAIDS), Geneva, Switzerland
-
UNAIDS. (2010) UNAIDS report on the global AIDS epidemic 2010, Joint United Nations Programme on HIV/AIDS (UNAIDS), Geneva, Switzerland.
-
UNAIDS Report on the Global AIDS Epidemic 2010
-
-
-
3
-
-
46049096099
-
Viral reservoirs, residual viremia, and the potential of highly active antiretroviral therapy to eradicate HIV infection
-
Shen, L. and Siliciano, R. F. (2008) Viral reservoirs, residual viremia, and the potential of highly active antiretroviral therapy to eradicate HIV infection J. Allergy. Clin. Immunol. 122, 22-28
-
(2008)
J. Allergy. Clin. Immunol.
, vol.122
, pp. 22-28
-
-
Shen, L.1
Siliciano, R.F.2
-
4
-
-
79952171610
-
Molecular basis for drug resistance in HIV-1 protease
-
Ali, A., Bandaranayake, R. M., Cai, Y., King, N. M., Kolli, M., Mittal, S., Murzycki, J. F., Nalam, M. N., Nalivaika, E. A., Ozen, A., Prabu-Jeyabalan, M. M., Thayer, K., and Schiffer, C. A. (2011) Molecular basis for drug resistance in HIV-1 protease Viruses 2, 2509-2535
-
(2011)
Viruses
, vol.2
, pp. 2509-2535
-
-
Ali, A.1
Bandaranayake, R.M.2
Cai, Y.3
King, N.M.4
Kolli, M.5
Mittal, S.6
Murzycki, J.F.7
Nalam, M.N.8
Nalivaika, E.A.9
Ozen, A.10
Prabu-Jeyabalan, M.M.11
Thayer, K.12
Schiffer, C.A.13
-
5
-
-
73549092917
-
Fifteen years of HIV protease inhibitors: Raising the barrier to resistance
-
Wensing, A. M., van Maarseveen, N. M., and Nijhuis, M. (2009) Fifteen years of HIV protease inhibitors: raising the barrier to resistance Antiviral Res. 85, 59-74
-
(2009)
Antiviral Res.
, vol.85
, pp. 59-74
-
-
Wensing, A.M.1
Van Maarseveen, N.M.2
Nijhuis, M.3
-
6
-
-
0032918170
-
Perspectives of non-nucleoside reverse transcriptase inhibitors (NNRTIs) in the therapy of HIV-1 infection
-
De Clercq, E. (1999) Perspectives of non-nucleoside reverse transcriptase inhibitors (NNRTIs) in the therapy of HIV-1 infection Farmaco 54, 26-45
-
(1999)
Farmaco
, vol.54
, pp. 26-45
-
-
De Clercq, E.1
-
7
-
-
64849113665
-
Trapping moving targets with small molecules
-
Lee, G. M. and Craik, C. S. (2009) Trapping moving targets with small molecules Science 324, 213-215
-
(2009)
Science
, vol.324
, pp. 213-215
-
-
Lee, G.M.1
Craik, C.S.2
-
8
-
-
33748955158
-
Ultra-high resolution crystal structure of HIV-1 protease mutant reveals two binding sites for clinical inhibitor TMC114
-
Kovalevsky, A. Y., Liu, F., Leshchenko, S., Ghosh, A. K., Louis, J. M., Harrison, R. W., and Weber, I. T. (2006) Ultra-high resolution crystal structure of HIV-1 protease mutant reveals two binding sites for clinical inhibitor TMC114 J. Mol. Biol. 363, 161-173
-
(2006)
J. Mol. Biol.
, vol.363
, pp. 161-173
-
-
Kovalevsky, A.Y.1
Liu, F.2
Leshchenko, S.3
Ghosh, A.K.4
Louis, J.M.5
Harrison, R.W.6
Weber, I.T.7
-
9
-
-
54549105456
-
Solution kinetics measurements suggest HIV-1 protease has two binding sites for darunavir and amprenavir
-
Kovalevsky, A. Y., Ghosh, A. K., and Weber, I. T. (2008) Solution kinetics measurements suggest HIV-1 protease has two binding sites for darunavir and amprenavir J. Med. Chem. 51, 6599-6603
-
(2008)
J. Med. Chem.
, vol.51
, pp. 6599-6603
-
-
Kovalevsky, A.Y.1
Ghosh, A.K.2
Weber, I.T.3
-
10
-
-
54249109408
-
Structural evidence for effectiveness of darunavir and two related antiviral inhibitors against HIV-2 protease
-
Kovalevsky, A. Y., Louis, J. M., Aniana, A., Ghosh, A. K., and Weber, I. T. (2008) Structural evidence for effectiveness of darunavir and two related antiviral inhibitors against HIV-2 protease J. Mol. Biol. 384, 178-192
-
(2008)
J. Mol. Biol.
, vol.384
, pp. 178-192
-
-
Kovalevsky, A.Y.1
Louis, J.M.2
Aniana, A.3
Ghosh, A.K.4
Weber, I.T.5
-
11
-
-
0036121219
-
Substrate shape determines specificity of recognition for HIV-1 protease: Analysis of crystal structures of six substrate complexes
-
Prabu-Jeyabalan, M., Nalivaika, E., and Schiffer, C. A. (2002) Substrate shape determines specificity of recognition for HIV-1 protease: analysis of crystal structures of six substrate complexes Structure 10, 369-381
-
(2002)
Structure
, vol.10
, pp. 369-381
-
-
Prabu-Jeyabalan, M.1
Nalivaika, E.2
Schiffer, C.A.3
-
12
-
-
77951484077
-
Evaluating the substrate-envelope hypothesis: Structural analysis of novel HIV-1 protease inhibitors designed to be robust against drug resistance
-
Nalam, M. N., Ali, A., Altman, M. D., Reddy, G. S., Chellappan, S., Kairys, V., Ozen, A., Cao, H., Gilson, M. K., Tidor, B., Rana, T. M., and Schiffer, C. A. (2010) Evaluating the substrate-envelope hypothesis: structural analysis of novel HIV-1 protease inhibitors designed to be robust against drug resistance J. Virol. 84, 5368-5378
-
(2010)
J. Virol.
, vol.84
, pp. 5368-5378
-
-
Nalam, M.N.1
Ali, A.2
Altman, M.D.3
Reddy, G.S.4
Chellappan, S.5
Kairys, V.6
Ozen, A.7
Cao, H.8
Gilson, M.K.9
Tidor, B.10
Rana, T.M.11
Schiffer, C.A.12
-
13
-
-
1842454635
-
HIV-1 protease molecular dynamics of a wild-type and of the V82F/I84V mutant: Possible contributions to drug resistance and a potential new target site for drugs
-
Perryman, A. L., Lin, J. H., and McCammon, J. A. (2004) HIV-1 protease molecular dynamics of a wild-type and of the V82F/I84V mutant: Possible contributions to drug resistance and a potential new target site for drugs Protein Sci. 13, 1108-1123
-
(2004)
Protein Sci.
, vol.13
, pp. 1108-1123
-
-
Perryman, A.L.1
Lin, J.H.2
McCammon, J.A.3
-
14
-
-
74549122017
-
AP24163 inhibits the gatekeeper mutant of BCR-ABL and suppresses in vitro resistance
-
Azam, M., Powers, J. T., Einhorn, W., Huang, W. S., Shakespeare, W. C., Zhu, X., Dalgarno, D., Clackson, T., Sawyer, T. K., and Daley, G. Q. (2010) AP24163 inhibits the gatekeeper mutant of BCR-ABL and suppresses in vitro resistance Chem. Biol. Drug Des. 75, 223-227
-
(2010)
Chem. Biol. Drug Des.
, vol.75
, pp. 223-227
-
-
Azam, M.1
Powers, J.T.2
Einhorn, W.3
Huang, W.S.4
Shakespeare, W.C.5
Zhu, X.6
Dalgarno, D.7
Clackson, T.8
Sawyer, T.K.9
Daley, G.Q.10
-
15
-
-
75749146563
-
Targeting Bcr-Abl by combining allosteric with ATP-binding-site inhibitors
-
Zhang, J., Adrian, F. J., Jahnke, W., Cowan-Jacob, S. W., Li, A. G., Iacob, R. E., Sim, T., Powers, J., Dierks, C., Sun, F., Guo, G. R., Ding, Q., Okram, B., Choi, Y., Wojciechowski, A., Deng, X., Liu, G., Fendrich, G., Strauss, A., Vajpai, N., Grzesiek, S., Tuntland, T., Liu, Y., Bursulaya, B., Azam, M., Manley, P. W., Engen, J. R., Daley, G. Q., Warmuth, M., and Gray, N. S. (2010) Targeting Bcr-Abl by combining allosteric with ATP-binding-site inhibitors Nature 463, 501-506
-
(2010)
Nature
, vol.463
, pp. 501-506
-
-
Zhang, J.1
Adrian, F.J.2
Jahnke, W.3
Cowan-Jacob, S.W.4
Li, A.G.5
Iacob, R.E.6
Sim, T.7
Powers, J.8
Dierks, C.9
Sun, F.10
Guo, G.R.11
Ding, Q.12
Okram, B.13
Choi, Y.14
Wojciechowski, A.15
Deng, X.16
Liu, G.17
Fendrich, G.18
Strauss, A.19
Vajpai, N.20
Grzesiek, S.21
Tuntland, T.22
Liu, Y.23
Bursulaya, B.24
Azam, M.25
Manley, P.W.26
Engen, J.R.27
Daley, G.Q.28
Warmuth, M.29
Gray, N.S.30
more..
-
16
-
-
76049105922
-
Fragment-based screen against HIV protease
-
Perryman, A. L., Zhang, Q., Soutter, H. H., Rosenfeld, R., McRee, D. E., Olson, A. J., Elder, J. E., and Stout, C. D. (2010) Fragment-based screen against HIV protease Chem. Biol. Drug Des. 75, 257-268
-
(2010)
Chem. Biol. Drug Des.
, vol.75
, pp. 257-268
-
-
Perryman, A.L.1
Zhang, Q.2
Soutter, H.H.3
Rosenfeld, R.4
McRee, D.E.5
Olson, A.J.6
Elder, J.E.7
Stout, C.D.8
-
17
-
-
70349932423
-
AutoDock4 and AutoDockTools4: Automated docking with selective receptor flexibility
-
Morris, G. M., Huey, R., Lindstrom, W., Sanner, M. F., Belew, R. K., Goodsell, D. S., and Olson, A. J. (2009) AutoDock4 and AutoDockTools4: Automated docking with selective receptor flexibility J. Comput. Chem. 30, 2785-2791
-
(2009)
J. Comput. Chem.
, vol.30
, pp. 2785-2791
-
-
Morris, G.M.1
Huey, R.2
Lindstrom, W.3
Sanner, M.F.4
Belew, R.K.5
Goodsell, D.S.6
Olson, A.J.7
-
18
-
-
34447649044
-
Conformational flexibility in the flap domains of ligand-free HIV protease
-
Heaslet, H., Rosenfeld, R., Giffin, M., Lin, Y.-C., Tam, K., Torbett, B. E., Elder, J. H., McRee, D. E., and Stout, C. D. (2007) Conformational flexibility in the flap domains of ligand-free HIV protease Acta Crystallogr., Sect. D: Biol. Crystallogr. 63, 866-875
-
(2007)
Acta Crystallogr., Sect. D: Biol. Crystallogr.
, vol.63
, pp. 866-875
-
-
Heaslet, H.1
Rosenfeld, R.2
Giffin, M.3
Lin, Y.-C.4
Tam, K.5
Torbett, B.E.6
Elder, J.H.7
McRee, D.E.8
Stout, C.D.9
-
19
-
-
0025108755
-
Crystallographic analysis of a complex between human immunodeficiency virus type 1 protease and acetyl-pepstatin at 2.0-A resolution
-
Fitzgerald, P. M., McKeever, B. M., VanMiddlesworth, J. F., Springer, J. P., Heimbach, J. C., Leu, C. T., Herber, W. K., Dixon, R. A., and Darke, P. L. (1990) Crystallographic analysis of a complex between human immunodeficiency virus type 1 protease and acetyl-pepstatin at 2.0-A resolution J. Biol. Chem. 265, 14209-14219
-
(1990)
J. Biol. Chem.
, vol.265
, pp. 14209-14219
-
-
Fitzgerald, P.M.1
McKeever, B.M.2
Vanmiddlesworth, J.F.3
Springer, J.P.4
Heimbach, J.C.5
Leu, C.T.6
Herber, W.K.7
Dixon, R.A.8
Darke, P.L.9
-
20
-
-
0028105957
-
The HIV-1 protease as enzyme and substrate: Mutagenesis of autolysis sites and generation of a stable mutant with retained kinetic properties
-
Mildner, A. M., Rothrock, D. J., Leone, J. W., Bannow, C. A., Lull, J. M., Reardon, I. M., Sarcich, J. L., Howe, W. J., Tomich, C. S., and Smith, C. W. 1994, The HIV-1 protease as enzyme and substrate: mutagenesis of autolysis sites and generation of a stable mutant with retained kinetic properties Biochemistry 33, 9405-9413
-
(1994)
Biochemistry
, vol.33
, pp. 9405-9413
-
-
Mildner, A.M.1
Rothrock, D.J.2
Leone, J.W.3
Bannow, C.A.4
Lull, J.M.5
Reardon, I.M.6
Sarcich, J.L.7
Howe, W.J.8
Tomich, C.S.9
Smith, C.W.10
-
21
-
-
0034483901
-
Curling of flap tips in HIV-1 protease as a mechanism for substrate entry and tolerance of drug resistance
-
Scott, W. R. and Schiffer, C. A. (2000) Curling of flap tips in HIV-1 protease as a mechanism for substrate entry and tolerance of drug resistance Structure 8, 1259-1265
-
(2000)
Structure
, vol.8
, pp. 1259-1265
-
-
Scott, W.R.1
Schiffer, C.A.2
-
22
-
-
0037634016
-
A solution NMR study of the binding kinetics and the internal dynamics of an HIV-1 protease-substrate complex
-
Katoh, E., Louis, J. M., Yamazaki, T., Gronenborn, A. M., Torchia, D. A., and Ishima, R. (2003) A solution NMR study of the binding kinetics and the internal dynamics of an HIV-1 protease-substrate complex Protein Sci. 12, 1376-1385
-
(2003)
Protein Sci.
, vol.12
, pp. 1376-1385
-
-
Katoh, E.1
Louis, J.M.2
Yamazaki, T.3
Gronenborn, A.M.4
Torchia, D.A.5
Ishima, R.6
-
23
-
-
0036147844
-
Rapid structural fluctuations of the free HIV protease flaps in solution: Relationship to crystal structures and comparison with predictions of dynamics calculations
-
Freedberg, D. I., Ishima, R., Jacob, J., Wang, Y. X., Kustanovich, I., Louis, J. M., and Torchia, D. A. (2002) Rapid structural fluctuations of the free HIV protease flaps in solution: Relationship to crystal structures and comparison with predictions of dynamics calculations Protein Sci. 11, 221-232
-
(2002)
Protein Sci.
, vol.11
, pp. 221-232
-
-
Freedberg, D.I.1
Ishima, R.2
Jacob, J.3
Wang, Y.X.4
Kustanovich, I.5
Louis, J.M.6
Torchia, D.A.7
-
24
-
-
0033200247
-
Flap opening and dimer-interface flexibility in the free and inhibitor-bound HIV protease, and their implications for function
-
Ishima, R., Freedberg, D. I., Wang, Y. X., Louis, J. M., and Torchia, D. A. (1999) Flap opening and dimer-interface flexibility in the free and inhibitor-bound HIV protease, and their implications for function Struct. Folding Des. 7, 1047-1055
-
(1999)
Struct. Folding Des.
, vol.7
, pp. 1047-1055
-
-
Ishima, R.1
Freedberg, D.I.2
Wang, Y.X.3
Louis, J.M.4
Torchia, D.A.5
-
25
-
-
34548737701
-
Interflap distances in HIV-1 protease determined by pulsed EPR measurements
-
Galiano, L., Bonora, M., and Fanucci, G. E. (2007) Interflap distances in HIV-1 protease determined by pulsed EPR measurements J. Am. Chem. Soc. 129, 11004-11005
-
(2007)
J. Am. Chem. Soc.
, vol.129
, pp. 11004-11005
-
-
Galiano, L.1
Bonora, M.2
Fanucci, G.E.3
-
26
-
-
44949121782
-
Solution structure of HIV-1 protease flaps probed by comparison of molecular dynamics simulation ensembles and EPR experiments
-
Ding, F., Layten, M., and Simmerling, C. (2008) Solution structure of HIV-1 protease flaps probed by comparison of molecular dynamics simulation ensembles and EPR experiments J. Am. Chem. Soc. 130, 7184-7185
-
(2008)
J. Am. Chem. Soc.
, vol.130
, pp. 7184-7185
-
-
Ding, F.1
Layten, M.2
Simmerling, C.3
-
27
-
-
70350052784
-
Subtype polymorphisms among HIV-1 protease variants confer altered flap conformations and flexibility
-
Kear, J. L., Blackburn, M. E., Veloro, A. M., Dunn, B. M., and Fanucci, G. E. (2009) Subtype polymorphisms among HIV-1 protease variants confer altered flap conformations and flexibility J. Am. Chem. Soc. 131, 14650-14651
-
(2009)
J. Am. Chem. Soc.
, vol.131
, pp. 14650-14651
-
-
Kear, J.L.1
Blackburn, M.E.2
Veloro, A.M.3
Dunn, B.M.4
Fanucci, G.E.5
-
28
-
-
70349153078
-
Monitoring inhibitor-induced conformational population shifts in HIV-1 protease by pulsed EPR spectroscopy
-
Blackburn, M. E., Veloro, A. M., and Fanucci, G. E. (2009) Monitoring inhibitor-induced conformational population shifts in HIV-1 protease by pulsed EPR spectroscopy Biochemistry 48, 8765-8767
-
(2009)
Biochemistry
, vol.48
, pp. 8765-8767
-
-
Blackburn, M.E.1
Veloro, A.M.2
Fanucci, G.E.3
-
29
-
-
84855486395
-
Protein conformational dynamics in the mechanism of HIV-1 protease catalysis
-
Torbeev, V. Y., Raghuraman, H., Hamelberg, D., Tonelli, M., Westler, W. M., Perozo, E., and Kent, S. B. (2011) Protein conformational dynamics in the mechanism of HIV-1 protease catalysis Proc. Natl. Acad. Sci. U.S.A. 108, 20982-20987
-
(2011)
Proc. Natl. Acad. Sci. U.S.A.
, vol.108
, pp. 20982-20987
-
-
Torbeev, V.Y.1
Raghuraman, H.2
Hamelberg, D.3
Tonelli, M.4
Westler, W.M.5
Perozo, E.6
Kent, S.B.7
-
30
-
-
61749086002
-
Dynamics of ″flap″ structures in three HIV-1 protease/inhibitor complexes probed by total chemical synthesis and pulse-EPR spectroscopy
-
Torbeev, V. Y., Raghuraman, H., Mandal, K., Senapati, S., Perozo, E., and Kent, S. B. (2009) Dynamics of ″flap″ structures in three HIV-1 protease/inhibitor complexes probed by total chemical synthesis and pulse-EPR spectroscopy J. Am. Chem. Soc. 131, 884-885
-
(2009)
J. Am. Chem. Soc.
, vol.131
, pp. 884-885
-
-
Torbeev, V.Y.1
Raghuraman, H.2
Mandal, K.3
Senapati, S.4
Perozo, E.5
Kent, S.B.6
-
31
-
-
0035314020
-
1.9 A X-ray study shows closed flap conformation in crystals of tethered HIV-1 PR
-
Pillai, B., Kannan, K. K., and Hosur, M. V. (2001) 1.9 A X-ray study shows closed flap conformation in crystals of tethered HIV-1 PR Proteins 43, 57-64
-
(2001)
Proteins
, vol.43
, pp. 57-64
-
-
Pillai, B.1
Kannan, K.K.2
Hosur, M.V.3
-
32
-
-
77952055764
-
X-ray snapshot of HIV-1 protease in action: Observation of tetrahedral intermediate and short ionic hydrogen bond SIHB with catalytic aspartate
-
Das, A., Mahale, S., Prashar, V., Bihani, S., Ferrer, J. L., and Hosur, M. V. (2010) X-ray snapshot of HIV-1 protease in action: observation of tetrahedral intermediate and short ionic hydrogen bond SIHB with catalytic aspartate J. Am. Chem. Soc. 132, 6366-6373
-
(2010)
J. Am. Chem. Soc.
, vol.132
, pp. 6366-6373
-
-
Das, A.1
Mahale, S.2
Prashar, V.3
Bihani, S.4
Ferrer, J.L.5
Hosur, M.V.6
-
33
-
-
0036290277
-
Effects of remote mutation on the autolysis of HIV-1 PR: X-ray and NMR investigations
-
Kumar, M., Kannan, K. K., Hosur, M. V., Bhavesh, N. S., Chatterjee, A., Mittal, R., and Hosur, R. V. (2002) Effects of remote mutation on the autolysis of HIV-1 PR: X-ray and NMR investigations Biochem. Biophys. Res. Commun. 294, 395-401
-
(2002)
Biochem. Biophys. Res. Commun.
, vol.294
, pp. 395-401
-
-
Kumar, M.1
Kannan, K.K.2
Hosur, M.V.3
Bhavesh, N.S.4
Chatterjee, A.5
Mittal, R.6
Hosur, R.V.7
-
34
-
-
84857804736
-
Hydrophobic core flexibility modulates enzyme activity in HIV-1 protease
-
Mittal, S., Cai, Y., Nalam, M. N. L., Bolon, D. N. A., and Schiffer, C. A. (2012) Hydrophobic core flexibility modulates enzyme activity in HIV-1 protease J. Am. Chem. Soc. 134, 4163-4168
-
(2012)
J. Am. Chem. Soc.
, vol.134
, pp. 4163-4168
-
-
Mittal, S.1
Cai, Y.2
Nalam, M.N.L.3
Bolon, D.N.A.4
Schiffer, C.A.5
-
35
-
-
70349335348
-
Resistance mechanism revealed by crystal structures of unliganded nelfinavir-resistant HIV-1 protease non-active site mutants N88D and N88S
-
Bihani, S. C., Das, A., Prashar, V., Ferrer, J. L., and Hosur, M. V. (2009) Resistance mechanism revealed by crystal structures of unliganded nelfinavir-resistant HIV-1 protease non-active site mutants N88D and N88S Biochem. Biophys. Res. Commun. 389, 295-300
-
(2009)
Biochem. Biophys. Res. Commun.
, vol.389
, pp. 295-300
-
-
Bihani, S.C.1
Das, A.2
Prashar, V.3
Ferrer, J.L.4
Hosur, M.V.5
-
36
-
-
11144356514
-
A phenylnorstatine inhibitor binding to HIV-1 protease: A geometry, protonation, and subsite-pocket interactions analyzed at atomic resolution
-
Brynda, J., Rezacova, P., Fabry, M., Horejsi, M., Stouracova, R., Sedlacek, J., Soucek, M., Hradilek, M., Lepsik, M., and Konvalinka, J. (2004) A phenylnorstatine inhibitor binding to HIV-1 protease: a geometry, protonation, and subsite-pocket interactions analyzed at atomic resolution J. Med. Chem. 47, 2030-2036
-
(2004)
J. Med. Chem.
, vol.47
, pp. 2030-2036
-
-
Brynda, J.1
Rezacova, P.2
Fabry, M.3
Horejsi, M.4
Stouracova, R.5
Sedlacek, J.6
Soucek, M.7
Hradilek, M.8
Lepsik, M.9
Konvalinka, J.10
-
37
-
-
33750470057
-
Chemical screening methods to identify ligands that promote protein stability, protein crystallization, and structure determination
-
Vedadi, M., Niesen, F. H., Allali-Hassani, A., Fedorov, O. Y., Finerty, P. J., Jr., Wasney, G. A., Yeung, R., Arrowsmith, C., Ball, L. J., Berglund, H., Hui, R., Marsden, B. D., Nordlund, P., Sundstrom, M., Weigelt, J., and Edwards, A. M. (2006) Chemical screening methods to identify ligands that promote protein stability, protein crystallization, and structure determination Proc. Natl. Acad. Sci. U.S. A. 103, 15835-15840
-
(2006)
Proc. Natl. Acad. Sci. U.S. A.
, vol.103
, pp. 15835-15840
-
-
Vedadi, M.1
Niesen, F.H.2
Allali-Hassani, A.3
Fedorov, O.Y.4
Finerty, Jr.P.J.5
Wasney, G.A.6
Yeung, R.7
Arrowsmith, C.8
Ball, L.J.9
Berglund, H.10
Hui, R.11
Marsden, B.D.12
Nordlund, P.13
Sundstrom, M.14
Weigelt, J.15
Edwards, A.M.16
-
38
-
-
37249005205
-
The use of differential scanning fluorimetry to detect ligand interactions that promote protein stability
-
Niesen, F. H., Berglund, H., and Vedadi, M. (2007) The use of differential scanning fluorimetry to detect ligand interactions that promote protein stability Nat. Protoc. 2, 2212-2221
-
(2007)
Nat. Protoc.
, vol.2
, pp. 2212-2221
-
-
Niesen, F.H.1
Berglund, H.2
Vedadi, M.3
-
39
-
-
80255138809
-
A comparative study of HIV-1 and HTLV-I protease structure and dynamics reveals a conserved residue interaction network
-
Rücker, P., Horn, A., Meiselbach, H., and Sticht, H. (2011) A comparative study of HIV-1 and HTLV-I protease structure and dynamics reveals a conserved residue interaction network J. Mol. Model. 17, 2693-2705
-
(2011)
J. Mol. Model.
, vol.17
, pp. 2693-2705
-
-
Rücker, P.1
Horn, A.2
Meiselbach, H.3
Sticht, H.4
-
40
-
-
34648815160
-
Free-solution, label-free molecular interactions studied by back-scattering interferometry
-
Bornhop, D. J., Latham, J. C., Kussrow, A., Markov, D. A., Jones, R. D., and Sorensen, H. S. (2007) Free-solution, label-free molecular interactions studied by back-scattering interferometry Science 317, 1732-1736
-
(2007)
Science
, vol.317
, pp. 1732-1736
-
-
Bornhop, D.J.1
Latham, J.C.2
Kussrow, A.3
Markov, D.A.4
Jones, R.D.5
Sorensen, H.S.6
-
41
-
-
64749106155
-
Free-solution label-free detection of alpha-Crystallin chaperone interactions by back-scattering interferometry
-
Latham, J. C., Stein, R. A., Bornhop, D. J., and McHaourab, H. S. (2009) Free-solution label-free detection of alpha-Crystallin chaperone interactions by back-scattering interferometry Anal. Chem. 81, 1865-1871
-
(2009)
Anal. Chem.
, vol.81
, pp. 1865-1871
-
-
Latham, J.C.1
Stein, R.A.2
Bornhop, D.J.3
McHaourab, H.S.4
-
42
-
-
79953839803
-
Label-free quantification of membrane-ligand interactions using backscattering interferometry
-
Baksh, M. M., Kussrow, A. K., Mileni, M., Finn, M. G., and Bornhop, D. J. (2011) Label-free quantification of membrane-ligand interactions using backscattering interferometry Nat. Biotechnol. 29, 357-360
-
(2011)
Nat. Biotechnol.
, vol.29
, pp. 357-360
-
-
Baksh, M.M.1
Kussrow, A.K.2
Mileni, M.3
Finn, M.G.4
Bornhop, D.J.5
-
43
-
-
79551529077
-
Universal sensing by transduction of antibody binding with backscattering interferometry
-
Kussrow, A., Baksh, M. M., Bornhop, D. J., and Finn, M. G. (2011) Universal sensing by transduction of antibody binding with backscattering interferometry ChemBioChem 12, 367-370
-
(2011)
ChemBioChem
, vol.12
, pp. 367-370
-
-
Kussrow, A.1
Baksh, M.M.2
Bornhop, D.J.3
Finn, M.G.4
-
44
-
-
84855932989
-
Interferometric methods for label-free molecular interaction studies
-
Kussrow, A., Enders, C. S., and Bornhop, D. J. (2011) Interferometric methods for label-free molecular interaction studies Anal. Chem. 84, 779-792
-
(2011)
Anal. Chem.
, vol.84
, pp. 779-792
-
-
Kussrow, A.1
Enders, C.S.2
Bornhop, D.J.3
-
45
-
-
82555168058
-
Measurement of aptamer-protein interactions with back-scattering interferometry
-
Olmsted, I. R., Xiao, Y., Cho, M., Csordas, A. T., Sheehan, J. H., Meiler, J., Soh, H. T., and Bornhop, D. J. (2011) Measurement of aptamer-protein interactions with back-scattering interferometry Anal. Chem. 83, 8867-8870
-
(2011)
Anal. Chem.
, vol.83
, pp. 8867-8870
-
-
Olmsted, I.R.1
Xiao, Y.2
Cho, M.3
Csordas, A.T.4
Sheehan, J.H.5
Meiler, J.6
Soh, H.T.7
Bornhop, D.J.8
-
46
-
-
0034843933
-
Viral evolution in response to the broad-based retroviral protease inhibitor TL-3
-
Buhler, B., Lin, Y. C., Morris, G., Olson, A. J., Wong, C. H., Richman, D. D., Elder, J. H., and Torbett, B. E. (2001) Viral evolution in response to the broad-based retroviral protease inhibitor TL-3 J. Virol. 75, 9502-9508
-
(2001)
J. Virol.
, vol.75
, pp. 9502-9508
-
-
Buhler, B.1
Lin, Y.C.2
Morris, G.3
Olson, A.J.4
Wong, C.H.5
Richman, D.D.6
Elder, J.H.7
Torbett, B.E.8
-
47
-
-
13844312649
-
ZINC: A free database of commercially available compounds for virtual screening
-
Irwin, J. J. and Shoichet, B. K. (2005) ZINC: a free database of commercially available compounds for virtual screening J. Chem. Inf. Model. 45, 177-182
-
(2005)
J. Chem. Inf. Model.
, vol.45
, pp. 177-182
-
-
Irwin, J.J.1
Shoichet, B.K.2
-
48
-
-
0141726877
-
A 'rule of three' for fragment-based lead discovery?
-
Congreve, M., Carr, R., Murray, C., and Jhoti, H. (2003) A 'rule of three' for fragment-based lead discovery? Drug Discovery Today 8, 876-877
-
(2003)
Drug Discovery Today
, vol.8
, pp. 876-877
-
-
Congreve, M.1
Carr, R.2
Murray, C.3
Jhoti, H.4
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