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Volumn 436, Issue 2, 2013, Pages 152-155

Short hairpin RNA induces methylation of hepatitis B virus covalently closed circular DNA in human hepatoma cells

Author keywords

HBV cccDNA; Lentiviral vector; RNA directed DNA methylation; Short hairpin RNA

Indexed keywords

CIRCULAR DNA; HEPATITIS B VIRUS X PROTEIN; LENTIVIRUS VECTOR; SHORT HAIRPIN RNA; TETRACYCLINE;

EID: 84879604001     PISSN: 0006291X     EISSN: 10902104     Source Type: Journal    
DOI: 10.1016/j.bbrc.2013.04.108     Document Type: Article
Times cited : (14)

References (38)
  • 1
    • 0037062951 scopus 로고    scopus 로고
    • RNA interference
    • Hannon G.J. RNA interference. Nature 2002, 418:244-251.
    • (2002) Nature , vol.418 , pp. 244-251
    • Hannon, G.J.1
  • 2
    • 26944441255 scopus 로고    scopus 로고
    • Dicing and slicing: the core machinery of the RNA interference pathway
    • Hammond S.M. Dicing and slicing: the core machinery of the RNA interference pathway. FEBS Lett. 2005, 579:5822-5829.
    • (2005) FEBS Lett. , vol.579 , pp. 5822-5829
    • Hammond, S.M.1
  • 3
    • 60149088848 scopus 로고    scopus 로고
    • Origins and mechanisms of miRNAs and siRNAs
    • Carthew R.W., Sontheimer E.J. Origins and mechanisms of miRNAs and siRNAs. Cell 2009, 136:642-655.
    • (2009) Cell , vol.136 , pp. 642-655
    • Carthew, R.W.1    Sontheimer, E.J.2
  • 4
    • 10644237968 scopus 로고    scopus 로고
    • RNAi-mediated pathways in the nucleus
    • Matzke M.A., Birchler J.A. RNAi-mediated pathways in the nucleus. Nat. Rev. Genet. 2005, 6:24-35.
    • (2005) Nat. Rev. Genet. , vol.6 , pp. 24-35
    • Matzke, M.A.1    Birchler, J.A.2
  • 5
    • 58749097426 scopus 로고    scopus 로고
    • Small RNAs in transcriptional gene silencing and genome defence
    • Moazed D. Small RNAs in transcriptional gene silencing and genome defence. Nature 2009, 457:413-420.
    • (2009) Nature , vol.457 , pp. 413-420
    • Moazed, D.1
  • 6
    • 44349107704 scopus 로고    scopus 로고
    • Presence and role of cytosine methylation in DNA viruses of animals
    • Hoelzer K., Shackelton L.A., Parrish C.R. Presence and role of cytosine methylation in DNA viruses of animals. Nucleic Acids Res. 2008, 36:2825-2837.
    • (2008) Nucleic Acids Res. , vol.36 , pp. 2825-2837
    • Hoelzer, K.1    Shackelton, L.A.2    Parrish, C.R.3
  • 8
    • 77649123174 scopus 로고    scopus 로고
    • Epigenetic regulation of Kaposi's sarcoma-associated herpesvirus latency by virus-encoded microRNAs that target Rta and the cellular Rbl2-DNMT pathway
    • Lu F., Stedman W., Yousef M., Renne R., Lieberman P.M. Epigenetic regulation of Kaposi's sarcoma-associated herpesvirus latency by virus-encoded microRNAs that target Rta and the cellular Rbl2-DNMT pathway. J. Virol. 2010, 84:2697-2706.
    • (2010) J. Virol. , vol.84 , pp. 2697-2706
    • Lu, F.1    Stedman, W.2    Yousef, M.3    Renne, R.4    Lieberman, P.M.5
  • 10
    • 65649090562 scopus 로고    scopus 로고
    • Methylation regulates hepatitis B viral protein expression
    • Vivekanandan P., Thomas D., Torbenson M. Methylation regulates hepatitis B viral protein expression. J. Infect. Dis. 2009, 199:1286-1291.
    • (2009) J. Infect. Dis. , vol.199 , pp. 1286-1291
    • Vivekanandan, P.1    Thomas, D.2    Torbenson, M.3
  • 11
    • 67649989072 scopus 로고    scopus 로고
    • Evidence that methylation of hepatitis B virus covalently closed circular DNA in liver tissues of patients with chronic hepatitis B modulates HBV replication
    • Guo Y., Li Y., Mu S., Zhang J., Yan Z. Evidence that methylation of hepatitis B virus covalently closed circular DNA in liver tissues of patients with chronic hepatitis B modulates HBV replication. J. Med. Virol. 2009, 81:1177-1183.
    • (2009) J. Med. Virol. , vol.81 , pp. 1177-1183
    • Guo, Y.1    Li, Y.2    Mu, S.3    Zhang, J.4    Yan, Z.5
  • 12
    • 80053994925 scopus 로고    scopus 로고
    • Replicative activity of hepatitis B virus is negatively associated with methylation of covalently closed circular DNA in advanced hepatitis B virus infection
    • Kim J.W., Lee S.H., Park Y.S., Hwang J.H., Jeong S.H., Kim N., Lee D.H. Replicative activity of hepatitis B virus is negatively associated with methylation of covalently closed circular DNA in advanced hepatitis B virus infection. Intervirology 2011, 54:316-325.
    • (2011) Intervirology , vol.54 , pp. 316-325
    • Kim, J.W.1    Lee, S.H.2    Park, Y.S.3    Hwang, J.H.4    Jeong, S.H.5    Kim, N.6    Lee, D.H.7
  • 14
    • 0030842540 scopus 로고    scopus 로고
    • Inducible expression of human hepatitis B virus (HBV) in stably transfected hepatoblastoma cells: a novel system for screening potential inhibitors of HBV replication
    • Ladner S.K., Otto M.J., Barker C.S., Zaifert K., Wang G.H., Guo J.T., Seeger C., King R.W. Inducible expression of human hepatitis B virus (HBV) in stably transfected hepatoblastoma cells: a novel system for screening potential inhibitors of HBV replication. Antimicrob. Agents Chemother. 1997, 41:1715-1720.
    • (1997) Antimicrob. Agents Chemother. , vol.41 , pp. 1715-1720
    • Ladner, S.K.1    Otto, M.J.2    Barker, C.S.3    Zaifert, K.4    Wang, G.H.5    Guo, J.T.6    Seeger, C.7    King, R.W.8
  • 15
    • 34249930701 scopus 로고    scopus 로고
    • Short hairpin RNA causes the methylation of transforming growth factor-beta receptor II promoter and silencing of the target gene in rat hepatic stellate cells
    • Kim J.W., Zhang Y.H., Zern M.A., Rossi J.J., Wu J. Short hairpin RNA causes the methylation of transforming growth factor-beta receptor II promoter and silencing of the target gene in rat hepatic stellate cells. Biochem. Biophys. Res. Commun. 2007, 359:292-297.
    • (2007) Biochem. Biophys. Res. Commun. , vol.359 , pp. 292-297
    • Kim, J.W.1    Zhang, Y.H.2    Zern, M.A.3    Rossi, J.J.4    Wu, J.5
  • 16
    • 67849131065 scopus 로고    scopus 로고
    • Inhibition of in vitro hepatitis B virus replication by lentivirus-mediated short-hairpin RNA against HBx
    • Kim J.W., Lee S.H., Park Y.S., Jeong S.H., Kim N., Lee D.H. Inhibition of in vitro hepatitis B virus replication by lentivirus-mediated short-hairpin RNA against HBx. Korean J. Hepatol. 2009, 15:15-24.
    • (2009) Korean J. Hepatol. , vol.15 , pp. 15-24
    • Kim, J.W.1    Lee, S.H.2    Park, Y.S.3    Jeong, S.H.4    Kim, N.5    Lee, D.H.6
  • 18
    • 11844260706 scopus 로고    scopus 로고
    • Lentiviral vector delivery of recombinant small interfering RNA expression cassettes
    • Li M.J., Rossi J.J. Lentiviral vector delivery of recombinant small interfering RNA expression cassettes. Methods Enzymol. 2005, 392:218-226.
    • (2005) Methods Enzymol. , vol.392 , pp. 218-226
    • Li, M.J.1    Rossi, J.J.2
  • 19
    • 33646816447 scopus 로고    scopus 로고
    • Efficient inhibition of hepatitis B virus replication by small interfering RNAs targeted to the viral X gene in mice
    • Shin D., Kim S.I., Kim M., Park M. Efficient inhibition of hepatitis B virus replication by small interfering RNAs targeted to the viral X gene in mice. Virus Res. 2006, 119:146-153.
    • (2006) Virus Res. , vol.119 , pp. 146-153
    • Shin, D.1    Kim, S.I.2    Kim, M.3    Park, M.4
  • 20
    • 0037431266 scopus 로고    scopus 로고
    • Real-time quantitative reverse transcriptase-polymerase chain reaction as a method for determining lentiviral vector titers and measuring transgene expression
    • Lizee G., Aerts J.L., Gonzales M.I., Chinnasamy N., Morgan R.A., Topalian S.L. Real-time quantitative reverse transcriptase-polymerase chain reaction as a method for determining lentiviral vector titers and measuring transgene expression. Hum. Gene Ther. 2003, 14:497-507.
    • (2003) Hum. Gene Ther. , vol.14 , pp. 497-507
    • Lizee, G.1    Aerts, J.L.2    Gonzales, M.I.3    Chinnasamy, N.4    Morgan, R.A.5    Topalian, S.L.6
  • 21
    • 0036856355 scopus 로고    scopus 로고
    • MethPrimer: designing primers for methylation PCRs
    • Li L.C., Dahiya R. MethPrimer: designing primers for methylation PCRs. Bioinformatics 2002, 18:1427-1431.
    • (2002) Bioinformatics , vol.18 , pp. 1427-1431
    • Li, L.C.1    Dahiya, R.2
  • 22
    • 27744577751 scopus 로고    scopus 로고
    • BiQ analyzer: visualization and quality control for DNA methylation data from bisulfite sequencing
    • Bock C., Reither S., Mikeska T., Paulsen M., Walter J., Lengauer T. BiQ analyzer: visualization and quality control for DNA methylation data from bisulfite sequencing. Bioinformatics 2005, 21:4067-4068.
    • (2005) Bioinformatics , vol.21 , pp. 4067-4068
    • Bock, C.1    Reither, S.2    Mikeska, T.3    Paulsen, M.4    Walter, J.5    Lengauer, T.6
  • 24
    • 31544456413 scopus 로고    scopus 로고
    • Insights into the kinetics of siRNA-mediated gene silencing from live-cell and live-animal bioluminescent imaging
    • Bartlett D.W., Davis M.E. Insights into the kinetics of siRNA-mediated gene silencing from live-cell and live-animal bioluminescent imaging. Nucleic Acids Res. 2006, 34:322-333.
    • (2006) Nucleic Acids Res. , vol.34 , pp. 322-333
    • Bartlett, D.W.1    Davis, M.E.2
  • 26
    • 0037474126 scopus 로고    scopus 로고
    • ARGONAUTE4 control of locus-specific siRNA accumulation and DNA and histone methylation
    • Zilberman D., Cao X., Jacobsen S.E. ARGONAUTE4 control of locus-specific siRNA accumulation and DNA and histone methylation. Science 2003, 299:716-719.
    • (2003) Science , vol.299 , pp. 716-719
    • Zilberman, D.1    Cao, X.2    Jacobsen, S.E.3
  • 27
    • 34249809690 scopus 로고    scopus 로고
    • RNA-directed DNA methylation mediated by DRD1 and Pol IVb: a versatile pathway for transcriptional gene silencing in plants
    • Huettel B., Kanno T., Daxinger L., Bucher E., van der Winden J., Matzke A.J., Matzke M. RNA-directed DNA methylation mediated by DRD1 and Pol IVb: a versatile pathway for transcriptional gene silencing in plants. Biochim. Biophys. Acta 2007, 1769:358-374.
    • (2007) Biochim. Biophys. Acta , vol.1769 , pp. 358-374
    • Huettel, B.1    Kanno, T.2    Daxinger, L.3    Bucher, E.4    van der Winden, J.5    Matzke, A.J.6    Matzke, M.7
  • 28
    • 76749108015 scopus 로고    scopus 로고
    • RNA-directed transcriptional gene silencing and activation in human cells
    • Morris K.V. RNA-directed transcriptional gene silencing and activation in human cells. Oligonucleotides 2009, 19:299-306.
    • (2009) Oligonucleotides , vol.19 , pp. 299-306
    • Morris, K.V.1
  • 29
    • 0038581890 scopus 로고    scopus 로고
    • Transcription of antisense RNA leading to gene silencing and methylation as a novel cause of human genetic disease
    • Tufarelli C., Stanley J.A., Garrick D., Sharpe J.A., Ayyub H., Wood W.G., Higgs D.R. Transcription of antisense RNA leading to gene silencing and methylation as a novel cause of human genetic disease. Nat. Genet. 2003, 34:157-165.
    • (2003) Nat. Genet. , vol.34 , pp. 157-165
    • Tufarelli, C.1    Stanley, J.A.2    Garrick, D.3    Sharpe, J.A.4    Ayyub, H.5    Wood, W.G.6    Higgs, D.R.7
  • 30
    • 20844435197 scopus 로고    scopus 로고
    • Short hairpin RNA-directed cytosine (CpG) methylation of the RASSF1A gene promoter in HeLa cells
    • Castanotto D., Tommasi S., Li M., Li H., Yanow S., Pfeifer G.P., Rossi J.J. Short hairpin RNA-directed cytosine (CpG) methylation of the RASSF1A gene promoter in HeLa cells. Mol. Ther. 2005, 12:179-183.
    • (2005) Mol. Ther. , vol.12 , pp. 179-183
    • Castanotto, D.1    Tommasi, S.2    Li, M.3    Li, H.4    Yanow, S.5    Pfeifer, G.P.6    Rossi, J.J.7
  • 31
    • 0037134020 scopus 로고    scopus 로고
    • A system for stable expression of short interfering RNAs in mammalian cells
    • Brummelkamp T.R., Bernards R., Agami R. A system for stable expression of short interfering RNAs in mammalian cells. Science 2002, 296:550-553.
    • (2002) Science , vol.296 , pp. 550-553
    • Brummelkamp, T.R.1    Bernards, R.2    Agami, R.3
  • 33
    • 66249108936 scopus 로고    scopus 로고
    • Promoter targeted small RNAs induce long-term transcriptional gene silencing in human cells
    • Hawkins P.G., Santoso S., Adams C., Anest V., Morris K.V. Promoter targeted small RNAs induce long-term transcriptional gene silencing in human cells. Nucleic Acids Res. 2009, 37:2984-2995.
    • (2009) Nucleic Acids Res. , vol.37 , pp. 2984-2995
    • Hawkins, P.G.1    Santoso, S.2    Adams, C.3    Anest, V.4    Morris, K.V.5
  • 34
    • 0030716959 scopus 로고    scopus 로고
    • Sustained expression of genes delivered directly into liver and muscle by lentiviral vectors
    • Kafri T., Blomer U., Peterson D.A., Gage F.H., Verma I.M. Sustained expression of genes delivered directly into liver and muscle by lentiviral vectors. Nat. Genet. 1997, 17:314-317.
    • (1997) Nat. Genet. , vol.17 , pp. 314-317
    • Kafri, T.1    Blomer, U.2    Peterson, D.A.3    Gage, F.H.4    Verma, I.M.5
  • 35
    • 0343525195 scopus 로고    scopus 로고
    • Heavy de novo methylation at symmetrical and non-symmetrical sites is a hallmark of RNA-directed DNA methylation
    • Pelissier T., Thalmeir S., Kempe D., Sanger H.L., Wassenegger M. Heavy de novo methylation at symmetrical and non-symmetrical sites is a hallmark of RNA-directed DNA methylation. Nucleic Acids Res. 1999, 27:1625-1634.
    • (1999) Nucleic Acids Res. , vol.27 , pp. 1625-1634
    • Pelissier, T.1    Thalmeir, S.2    Kempe, D.3    Sanger, H.L.4    Wassenegger, M.5
  • 36
    • 70349240414 scopus 로고    scopus 로고
    • Chronic hepatitis B: update 2009
    • Lok A.S., McMahon B.J. Chronic hepatitis B: update 2009. Hepatology 2009, 50:661-662.
    • (2009) Hepatology , vol.50 , pp. 661-662
    • Lok, A.S.1    McMahon, B.J.2
  • 38
    • 79952535972 scopus 로고    scopus 로고
    • Regulation and function of DNA methylation in plants and animals
    • He X.J., Chen T., Zhu J.K. Regulation and function of DNA methylation in plants and animals. Cell Res. 2011, 21:442-465.
    • (2011) Cell Res. , vol.21 , pp. 442-465
    • He, X.J.1    Chen, T.2    Zhu, J.K.3


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