-
1
-
-
0033012398
-
Chemokine receptors as HIV-1 coreceptors: roles in viral entry, tropism, and disease
-
Berger EA, Murphy PM, Farber JM. Chemokine receptors as HIV-1 coreceptors: roles in viral entry, tropism, and disease. Annu Rev Immunol 1999; 17: 657-700.
-
(1999)
Annu Rev Immunol
, vol.17
, pp. 657-700
-
-
Berger, E.A.1
Murphy, P.M.2
Farber, J.M.3
-
2
-
-
27644510382
-
Maraviroc (UK-427,857), a potent, orally bioavailable, and selective small-molecule inhibitor of chemokine receptor CCR5 with broad-spectrum anti-human immunodeficiency virus type 1 activity
-
Dorr P, Westby M, Dobbs S et al. Maraviroc (UK-427,857), a potent, orally bioavailable, and selective small-molecule inhibitor of chemokine receptor CCR5 with broad-spectrum anti-human immunodeficiency virus type 1 activity. Antimicrob Agents Chemother 2005; 49: 4721-32.
-
(2005)
Antimicrob Agents Chemother
, vol.49
, pp. 4721-4732
-
-
Dorr, P.1
Westby, M.2
Dobbs, S.3
-
3
-
-
54849146700
-
Maraviroc for previously treated patients with R5 HIV-1 infection
-
Gulick RM, Lalezari J, Goodrich J, et al. Maraviroc for previously treated patients with R5 HIV-1 infection. N Engl J Med 2008; 359: 1429-41.
-
(2008)
N Engl J Med
, vol.359
, pp. 1429-1441
-
-
Gulick, R.M.1
Lalezari, J.2
Goodrich, J.3
-
4
-
-
0028168943
-
Changing virus-host interactions in the course of HIV-1 infection
-
Miedema F, Meyaard L, Koot M, et al. Changing virus-host interactions in the course of HIV-1 infection. Immunol Rev 1994; 140: 35-72.
-
(1994)
Immunol Rev
, vol.140
, pp. 35-72
-
-
Miedema, F.1
Meyaard, L.2
Koot, M.3
-
5
-
-
79952806615
-
Maraviroc is able to inhibit dual-R5 viruses in a dual/mixed HIV-1-infected patient
-
Symons J, van Lelyveld SF, Hoepelman AI, et al. Maraviroc is able to inhibit dual-R5 viruses in a dual/mixed HIV-1-infected patient. J Antimicrob Chemother 2011; 66: 890-5.
-
(2011)
J Antimicrob Chemother
, vol.66
, pp. 890-895
-
-
Symons, J.1
van Lelyveld, S.F.2
Hoepelman, A.I.3
-
6
-
-
0034749279
-
Determination of coreceptor usage of human immunodeficiency virus type 1 from patient plasma samples by using a recombinant phenotypic assay
-
Trouplin V, Salvatori F, Cappello F, et al. Determination of coreceptor usage of human immunodeficiency virus type 1 from patient plasma samples by using a recombinant phenotypic assay. J Virol 2001; 75: 251-9.
-
(2001)
J Virol
, vol.75
, pp. 251-259
-
-
Trouplin, V.1
Salvatori, F.2
Cappello, F.3
-
7
-
-
33846623260
-
Development and characterization of a novel single-cycle recombinant-virus assay to determine human immunodeficiency virus type 1 coreceptor tropism
-
Whitcomb JM, Huang W, Fransen S, et al. Development and characterization of a novel single-cycle recombinant-virus assay to determine human immunodeficiency virus type 1 coreceptor tropism. Antimicrob Agents Chemother 2007; 51: 566-75.
-
(2007)
Antimicrob Agents Chemother
, vol.51
, pp. 566-575
-
-
Whitcomb, J.M.1
Huang, W.2
Fransen, S.3
-
8
-
-
74149093296
-
Development and performance of a new recombinant virus phenotypic entry assay to determine HIV-1 coreceptor usage
-
Raymond S, Delobel P, Mavigner M, et al. Development and performance of a new recombinant virus phenotypic entry assay to determine HIV-1 coreceptor usage. J Clin Virol 2010; 47: 126-30.
-
(2010)
J Clin Virol
, vol.47
, pp. 126-130
-
-
Raymond, S.1
Delobel, P.2
Mavigner, M.3
-
9
-
-
78549289153
-
Population-based V3 genotypic tropism assay: a retrospective analysis using screening samples from the A4001029 and MOTIVATE studies
-
McGovern RA, Thielen A, Mo T, et al. Population-based V3 genotypic tropism assay: a retrospective analysis using screening samples from the A4001029 and MOTIVATE studies. AIDS 2010; 24: 2517-25.
-
(2010)
AIDS
, vol.24
, pp. 2517-2525
-
-
McGovern, R.A.1
Thielen, A.2
Mo, T.3
-
10
-
-
10744231634
-
Improved coreceptor usage prediction and genotypic monitoring of R5-to-X4 transition by motif analysis of human immunodeficiency virus type 1 env V3 loop sequences
-
Jensen MA, Li FS, van't Wout AB, et al. Improved coreceptor usage prediction and genotypic monitoring of R5-to-X4 transition by motif analysis of human immunodeficiency virus type 1 env V3 loop sequences. J Virol 2003; 77: 13376-88.
-
(2003)
J Virol
, vol.77
, pp. 13376-13388
-
-
Jensen, M.A.1
Li, F.S.2
van't Wout, A.B.3
-
11
-
-
36849083542
-
Bioinformatics prediction of HIV coreceptor usage
-
Lengauer T, Sander O, Sierra S, et al. Bioinformatics prediction of HIV coreceptor usage. Nat Biotechnol 2007; 25: 1407-10.
-
(2007)
Nat Biotechnol
, vol.25
, pp. 1407-1410
-
-
Lengauer, T.1
Sander, O.2
Sierra, S.3
-
12
-
-
34248523885
-
Population-based sequencing of the V3 region of env for predicting the coreceptor usage of human immunodeficiency virus type 1 quasispecies
-
Delobel P, Nugeyre MT, Cazabat M, et al. Population-based sequencing of the V3 region of env for predicting the coreceptor usage of human immunodeficiency virus type 1 quasispecies. J Clin Microbiol 2007, 45: 1572-80.
-
(2007)
J Clin Microbiol
, vol.45
-
-
Delobel, P.1
Nugeyre, M.T.2
Cazabat, M.3
-
13
-
-
40749106626
-
Evaluation of eight different bioinformatics tools to predict viral tropism in different human immunodeficiency virus type 1 subtypes
-
Garrido C, Roulet V, Chueca N, et al. Evaluation of eight different bioinformatics tools to predict viral tropism in different human immunodeficiency virus type 1 subtypes. J Clin Microbiol 2008; 46:887-91.
-
(2008)
J Clin Microbiol
, vol.46
, pp. 887-891
-
-
Garrido, C.1
Roulet, V.2
Chueca, N.3
-
14
-
-
60849085862
-
Correlation between genotypic predictions based on V3 sequences and phenotypic determination of HIV-1 tropism
-
Raymond S, Delobel P, Mavigner M, et al. Correlation between genotypic predictions based on V3 sequences and phenotypic determination of HIV-1 tropism. AIDS 2008; 22: F11-6.
-
(2008)
AIDS
, vol.22
-
-
Raymond, S.1
Delobel, P.2
Mavigner, M.3
-
15
-
-
77955373370
-
Evaluation of the genotypic prediction of HIV-1 coreceptor use versus a phenotypic assay and correlation with the virological response to maraviroc: the ANRS GenoTropism study
-
Recordon-Pinson P, SouliéC, Flandre P, et al. Evaluation of the genotypic prediction of HIV-1 coreceptor use versus a phenotypic assay and correlation with the virological response to maraviroc: the ANRS GenoTropism study. Antimicrob Agents Chemother 2010; 54: 3335-40.
-
(2010)
Antimicrob Agents Chemother
, vol.54
, pp. 3335-3340
-
-
Recordon-Pinson, P.1
Soulié, C.2
Flandre, P.3
-
16
-
-
77954180006
-
High sensitivity of specific genotypic tools for detection of X4 variants in antiretroviral-experienced patients suitable to be treated with CCR5 antagonists
-
Seclén E, Garrido C, González M, del M, et al. High sensitivity of specific genotypic tools for detection of X4 variants in antiretroviral-experienced patients suitable to be treated with CCR5 antagonists. J Antimicrob Chemother 2010; 65: 1486-92.
-
(2010)
J Antimicrob Chemother
, vol.65
, pp. 1486-1492
-
-
Seclén, E.1
Garrido, C.2
González, M.3
del, M.4
-
17
-
-
84859168636
-
Evaluation of genotypic tropism prediction tests compared with in vitro co-receptor usage in HIV-1 primary isolates of diverse subtypes
-
Delgado E, Fernández-García A, Vega Y, et al. Evaluation of genotypic tropism prediction tests compared with in vitro co-receptor usage in HIV-1 primary isolates of diverse subtypes. J Antimicrob Chemother 2012; 67: 25-31.
-
(2012)
J Antimicrob Chemother
, vol.67
, pp. 25-31
-
-
Delgado, E.1
Fernández-García, A.2
Vega, Y.3
-
18
-
-
33646444564
-
A reliable phenotype predictor for human immunodeficiency virus type 1 subtype C based on envelope V3 sequences
-
Jensen MA, Coetzer M, van't Wout AB, et al. A reliable phenotype predictor for human immunodeficiency virus type 1 subtype C based on envelope V3 sequences. J Virol 2006; 80: 4698-704.
-
(2006)
J Virol
, vol.80
, pp. 4698-4704
-
-
Jensen, M.A.1
Coetzer, M.2
van't Wout, A.B.3
-
19
-
-
79960145565
-
Genotypic prediction of HIV-1 subtype D tropism
-
Raymond S, Delobel P, Chaix ML, et al. Genotypic prediction of HIV-1 subtype D tropism. Retrovirology 2011; 8: 56.
-
(2011)
Retrovirology
, vol.8
, pp. 56
-
-
Raymond, S.1
Delobel, P.2
Chaix, M.L.3
-
20
-
-
0027154014
-
A single amino acid substitution in the V1 loop of human immunodeficiency virus type 1 gp120 alters cellular tropism
-
Boyd MT, Simpson GR, Cann AJ, et al. A single amino acid substitution in the V1 loop of human immunodeficiency virus type 1 gp120 alters cellular tropism. J Virol 1993; 67: 3649-52.
-
(1993)
J Virol
, vol.67
, pp. 3649-3652
-
-
Boyd, M.T.1
Simpson, G.R.2
Cann, A.J.3
-
21
-
-
0036196484
-
Variability in the human immunodeficiency virus type 1 gp120 Env protein linked to phenotype-associated changes in the V3 loop
-
Hoffman NG, Seillier-Moiseiwitsch F, Ahn J, et al. Variability in the human immunodeficiency virus type 1 gp120 Env protein linked to phenotype-associated changes in the V3 loop. J Virol 2002; 76: 3852-64.
-
(2002)
J Virol
, vol.76
, pp. 3852-3864
-
-
Hoffman, N.G.1
Seillier-Moiseiwitsch, F.2
Ahn, J.3
-
22
-
-
79955820877
-
Selected amino acid mutations in HIV-1 B subtype gp41 are associated with specific gp120v3 signatures in the regulation of co-receptor usage
-
Dimonte S, Mercurio F, Svicher V, et al. Selected amino acid mutations in HIV-1 B subtype gp41 are associated with specific gp120v3 signatures in the regulation of co-receptor usage. Retrovirology 2011; 8: 33.
-
(2011)
Retrovirology
, vol.8
, pp. 33
-
-
Dimonte, S.1
Mercurio, F.2
Svicher, V.3
-
23
-
-
79959427949
-
Mutations in gp41 are correlated with coreceptor tropism but do not improve prediction methods substantially
-
Thielen A, Lengauer T, Swenson LC, et al. Mutations in gp41 are correlated with coreceptor tropism but do not improve prediction methods substantially. Antivir Ther 2011; 16: 319-28.
-
(2011)
Antivir Ther
, vol.16
, pp. 319-328
-
-
Thielen, A.1
Lengauer, T.2
Swenson, L.C.3
-
24
-
-
43949118440
-
Coreceptor tropism can be influenced by amino acid substitutions in the gp41 transmembrane subunit of human immunodeficiency virus type 1 envelope protein
-
Huang W, Toma J, Fransen S, et al. Coreceptor tropism can be influenced by amino acid substitutions in the gp41 transmembrane subunit of human immunodeficiency virus type 1 envelope protein. J Virol 2008; 82: 5584-93.
-
(2008)
J Virol
, vol.82
, pp. 5584-5593
-
-
Huang, W.1
Toma, J.2
Fransen, S.3
-
25
-
-
0037100671
-
MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform
-
Katoh K, Misawa K, Kuma K, et al. MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform. Nucleic Acids Res 2002; 30: 3059-66.
-
(2002)
Nucleic Acids Res
, vol.30
, pp. 3059-3066
-
-
Katoh, K.1
Misawa, K.2
Kuma, K.3
-
26
-
-
50249100595
-
A rapid bootstrap algorithm for the RAxML Web servers
-
Stamatakis A, Hoover P, Rougemont J. A rapid bootstrap algorithm for the RAxML Web servers. Syst Biol 2008; 57: 758-71.
-
(2008)
Syst Biol
, vol.57
, pp. 758-771
-
-
Stamatakis, A.1
Hoover, P.2
Rougemont, J.3
-
27
-
-
84879465773
-
-
The CIPRES Portals.(23 January 2013, date last accessed).
-
Miller MA, Holder MT, Vos R, et al. The CIPRES Portals. http://www. phylo.org/sub_sections/portal (23 January 2013, date last accessed).
-
-
-
Miller, M.A.1
Holder, M.T.2
Vos, R.3
-
28
-
-
78349299783
-
Genetic signatures in the envelope glycoproteins of HIV-1 that associate with broadly neutralizing antibodies
-
Gnanakaran S, Daniels MG, Bhattacharya T, et al. Genetic signatures in the envelope glycoproteins of HIV-1 that associate with broadly neutralizing antibodies. PLoS Comput Biol 2010; 6: e1000955.
-
(2010)
PLoS Comput Biol
, vol.6
-
-
Gnanakaran, S.1
Daniels, M.G.2
Bhattacharya, T.3
-
29
-
-
7244250182
-
Data Mining in bioinformatics using Weka
-
Frank E, Hall M, Trigg L, et al. Data Mining in bioinformatics using Weka. Bioinformatics 2004; 20: 2479-81.
-
(2004)
Bioinformatics
, vol.20
, pp. 2479-2481
-
-
Frank, E.1
Hall, M.2
Trigg, L.3
-
31
-
-
0031381525
-
Wrappers for feature subset selection
-
Kohavi R, John GH. Wrappers for feature subset selection. Artificial Intelligence 1997; 97: 273-324.
-
(1997)
Artificial Intelligence
, vol.97
, pp. 273-324
-
-
Kohavi, R.1
John, G.H.2
-
32
-
-
27744597054
-
Structure of a V3-containing HIV-1 gp120 core
-
Huang CC, Tang M, Zhang MY, et al. Structure of a V3-containing HIV-1 gp120 core. Science 2005; 310: 1025-8.
-
(2005)
Science
, vol.310
, pp. 1025-1028
-
-
Huang, C.C.1
Tang, M.2
Zhang, M.Y.3
-
34
-
-
0002936464
-
Steps toward artificial intelligence
-
Feigembaum EA, Feldman J, eds. New York: McGraw Hill
-
Minsky M. Steps toward artificial intelligence. In: Feigembaum EA, Feldman J, eds. Computers and Thought. New York: McGraw Hill; 1963: 406-56.
-
(1963)
Computers and Thought.
, pp. 406-456
-
-
Minsky, M.1
-
35
-
-
84879497219
-
-
Geno2pheno [coreceptor] 2.0.(23 January 2013, date last accessed)
-
Geno2pheno [coreceptor] 2.0. http://coreceptor.bioinf.mpi-inf.mpg.de (23 January 2013, date last accessed).
-
-
-
-
36
-
-
84879475005
-
-
WebPSSM.(23 January 2013, date last accessed).
-
WebPSSM. http://indra.mullins.microbiol.washington.edu/webpssm (23 January 2013, date last accessed).
-
-
-
-
37
-
-
79955483926
-
European guidelines on the clinical management of HIV-1 tropism testing
-
Vandekerckhove LP, Wensing AM, Kaiser R, et al. European guidelines on the clinical management of HIV-1 tropism testing. Lancet Infect Dis 2011; 11: 394-407.
-
(2011)
Lancet Infect Dis
, vol.11
, pp. 394-407
-
-
Vandekerckhove, L.P.1
Wensing, A.M.2
Kaiser, R.3
-
38
-
-
60549093792
-
Development of a panel of well-characterized human immunodeficiency virus type 1isolates from newly diagnosed patients including acute and recent infections
-
Fernández-García A, Cuevas MT, Muñoz-Nieto M, et al. Development of a panel of well-characterized human immunodeficiency virus type 1isolates from newly diagnosed patients including acute and recent infections. AIDS Res Hum Retroviruses 2009; 25: 93-102.
-
(2009)
AIDS Res Hum Retroviruses
, vol.25
, pp. 93-102
-
-
Fernández-García, A.1
Cuevas, M.T.2
Muñoz-Nieto, M.3
-
39
-
-
77956367254
-
Short communication: Biological and genetic characterization of HIV type 1 subtype B and nonsubtype B transmitted viruses: usefulness for vaccine candidate assessment
-
Cuevas MT, Fernández-García A, Pinilla M, et al. Short communication: Biological and genetic characterization of HIV type 1 subtype B and nonsubtype B transmitted viruses: usefulness for vaccine candidate assessment. AIDS Res Hum Retroviruses 2010; 26: 1019-25.
-
(2010)
AIDS Res Hum Retroviruses
, vol.26
, pp. 1019-1025
-
-
Cuevas, M.T.1
Fernández-García, A.2
Pinilla, M.3
-
40
-
-
80051516348
-
Construction and phenotypic characterization of HIV type 1 functional envelope clones of subtypes G and F
-
Revilla A, Delgado E, Christian EC, et al. Construction and phenotypic characterization of HIV type 1 functional envelope clones of subtypes G and F. AIDS Res Hum Retroviruses 2011; 27: 889-901.
-
(2011)
AIDS Res Hum Retroviruses
, vol.27
, pp. 889-901
-
-
Revilla, A.1
Delgado, E.2
Christian, E.C.3
-
41
-
-
0042666831
-
Is the V3 loop involved in HIV binding to CD4?
-
Dettin M, Ferranti P, Scarinci C, et al. Is the V3 loop involved in HIV binding to CD4? Biochemistry 2003; 42: 9007-12.
-
(2003)
Biochemistry
, vol.42
, pp. 9007-9012
-
-
Dettin, M.1
Ferranti, P.2
Scarinci, C.3
-
42
-
-
0032543307
-
Structure of an HIV gp120 envelope glycoprotein in complex with the CD4 receptor and a neutralizing human antibody.
-
Kwong PD,Wyatt R, Robinson J, et al. Structure of an HIV gp120 envelope glycoprotein in complex with the CD4 receptor and a neutralizing human antibody. Nature 1998; 393: 648-59.
-
(1998)
Nature
, vol.393
, pp. 648-659
-
-
Kwong, P.D.1
Wyatt, R.2
Robinson, J.3
-
43
-
-
0032543555
-
The antigenic structure of the HIV gp120 envelope glycoprotein
-
Wyatt R, Kwong PD, Desjardins E, et al. The antigenic structure of the HIV gp120 envelope glycoprotein. Nature 1998; 393: 705-11.
-
(1998)
Nature
, vol.393
, pp. 705-711
-
-
Wyatt, R.1
Kwong, P.D.2
Desjardins, E.3
-
44
-
-
0037136261
-
Blockade of HIV-1 infection of New World monkey cells occurs primarily at the stage of virus entry
-
LaBonte JA, Babcock GJ, Patel T, et al. Blockade of HIV-1 infection of New World monkey cells occurs primarily at the stage of virus entry. J Exp Med 2002; 196: 431-45.
-
(2002)
J Exp Med
, vol.196
, pp. 431-445
-
-
LaBonte, J.A.1
Babcock, G.J.2
Patel, T.3
-
45
-
-
84857152687
-
Correlation of the virological response to short-term maraviroc monotherapy with standard and deep-sequencing-based genotypic tropism prediction methods
-
González-Serna A, McGovern RA, Harrigan PR, et al. Correlation of the virological response to short-term maraviroc monotherapy with standard and deep-sequencing-based genotypic tropism prediction methods. Antimicrob Agents Chemother 2012; 56: 1202-7.
-
(2012)
Antimicrob Agents Chemother
, vol.56
, pp. 1202-1207
-
-
González-Serna, A.1
McGovern, R.A.2
Harrigan, P.R.3
-
46
-
-
79952414942
-
Global trends in molecular epidemiology of HIV-1 during 2000-2007
-
Hemelaar J, Gouws E, Ghys PD, et al. Global trends in molecular epidemiology of HIV-1 during 2000-2007. AIDS 2011; 25: 679-89.
-
(2011)
AIDS
, vol.25
, pp. 679-689
-
-
Hemelaar, J.1
Gouws, E.2
Ghys, P.D.3
-
47
-
-
30944461040
-
Molecular epidemiology of HIV-1 variants in the global AIDS pandemic: an update
-
Thomson MM, Nájera R. Molecular epidemiology of HIV-1 variants in the global AIDS pandemic: an update. AIDS Rev 2005; 7: 210-24.
-
(2005)
AIDS Rev
, vol.7
, pp. 210-224
-
-
Thomson, M.M.1
Nájera, R.2
-
48
-
-
77958085720
-
Improved prediction of HIV-1 coreceptor usage with sequence information from the second hypervariable loop of gp120
-
Thielen A, Sichtig N, Kaiser R, et al. Improved prediction of HIV-1 coreceptor usage with sequence information from the second hypervariable loop of gp120. J Infect Dis 2010; 202: 1435-43.
-
(2010)
J Infect Dis
, vol.202
, pp. 1435-1443
-
-
Thielen, A.1
Sichtig, N.2
Kaiser, R.3
-
49
-
-
0024121591
-
Intragenic cis-acting art gene-responsive sequences of the human immunodeficiency virus
-
Rosen CA, Terwilliger E, Dayton A, et al. Intragenic cis-acting art gene-responsive sequences of the human immunodeficiency virus. Proc Nat Acad Sci U S A 1998; 85: 2071-5.
-
(1998)
Proc Nat Acad Sci U S A
, vol.85
, pp. 2071-2075
-
-
Rosen, C.A.1
Terwilliger, E.2
Dayton, A.3
-
50
-
-
0024836618
-
Specific binding of HIV-1 recombinant Rev protein to the Rev-responsive element in vitro
-
Daly TJ, Cook KS, Gray GS, et al. Specific binding of HIV-1 recombinant Rev protein to the Rev-responsive element in vitro. Nature 1989; 342: 816-9.
-
(1989)
Nature
, vol.342
, pp. 816-819
-
-
Daly, T.J.1
Cook, K.S.2
Gray, G.S.3
-
51
-
-
0024590032
-
The Rev (Trs/Art) protein of human immunodeficiency virus type 1 affects viral mRNA and protein expression via a cis-acting sequence in the env region
-
Hadzopoulou-Cladaras M, Felber BK, Cladaras C, et al. The Rev (Trs/Art) protein of human immunodeficiency virus type 1 affects viral mRNA and protein expression via a cis-acting sequence in the env region. J Virol 1989; 63: 1265-74.
-
(1989)
J Virol
, vol.63
, pp. 1265-1274
-
-
Hadzopoulou-Cladaras, M.1
Felber, B.K.2
Cladaras, C.3
-
52
-
-
3042606321
-
Peptide inhibitors of virus-cell fusion: enfuvirtide as a case study in clinical discovery and development
-
Cooper DA, Lange JM. Peptide inhibitors of virus-cell fusion: enfuvirtide as a case study in clinical discovery and development. Lancet Infect Dis 2004; 4: 426-36.
-
(2004)
Lancet Infect Dis
, vol.4
, pp. 426-436
-
-
Cooper, D.A.1
Lange, J.M.2
-
53
-
-
0034714156
-
Membrane-induced conformational change during the activation of HIV-1 gp41
-
Kliger Y, Peisajovich SG, Blumenthal R, et al. Membrane-induced conformational change during the activation of HIV-1 gp41. J Mol Biol 2000; 301: 905-14.
-
(2000)
J Mol Biol
, vol.301
, pp. 905-914
-
-
Kliger, Y.1
Peisajovich, S.G.2
Blumenthal, R.3
-
54
-
-
36148931769
-
Predicting HIV coreceptor usage on the basis of genetic and clinical covariates
-
Sing T, Low AJ, Beerenwinkel N, et al. Predicting HIV coreceptor usage on the basis of genetic and clinical covariates. Antivir Ther 2007; 12: 1097-106.
-
(2007)
Antivir Ther
, vol.12
, pp. 1097-1106
-
-
Sing, T.1
Low, A.J.2
Beerenwinkel, N.3
-
55
-
-
80055074737
-
Identification and structural characterization of novel genetic elements in the HIV-1 V3 loop regulating coreceptor usage
-
Svicher V, Alteri C, Artese A, et al. Identification and structural characterization of novel genetic elements in the HIV-1 V3 loop regulating coreceptor usage. Antivir Ther 2011; 16: 1035-45.
-
(2011)
Antivir Ther
, vol.16
, pp. 1035-1045
-
-
Svicher, V.1
Alteri, C.2
Artese, A.3
-
56
-
-
0033037358
-
Worldwide evaluation of DNA sequencing approaches for identification of drug resistance mutations in the human immunodeficiency virus type 1 reverse transcriptase
-
Schuurman R, Demeter L, Reichelderfer P, et al. Worldwide evaluation of DNA sequencing approaches for identification of drug resistance mutations in the human immunodeficiency virus type 1 reverse transcriptase. J Clin Microbiol 1999; 37: 2291-6.
-
(1999)
J Clin Microbiol
, vol.37
, pp. 2291-2296
-
-
Schuurman, R.1
Demeter, L.2
Reichelderfer, P.3
-
57
-
-
19944428265
-
Multiple, linked human immunodeficiency virus type 1 drug resistance mutations in treatment-experienced patients are missed by standard genotype analysis
-
Palmer S, Kearney M, Maldarelli F, et al. Multiple, linked human immunodeficiency virus type 1 drug resistance mutations in treatment-experienced patients are missed by standard genotype analysis. J Clin Microbiol 2005; 43: 406-13.
-
(2005)
J Clin Microbiol
, vol.43
, pp. 406-413
-
-
Palmer, S.1
Kearney, M.2
Maldarelli, F.3
-
58
-
-
84879491154
-
Longitudinal 'deep' sequenceanalysis of dual/mixed infected patients treated with maraviroc demonstrates rapid selection for X4-tropic virus with extremely low FPR
-
Abstract A97 Los Cabos, Mexico,
-
McGovern R, SymonsJ, PoonAet al. Longitudinal 'deep' sequenceanalysis of dual/mixed infected patients treated with maraviroc demonstrates rapid selection for X4-tropic virus with extremely low FPR. In: Abstracts of the International Workshop on HIV & Hepatitis Virus Drug Resistance and Curative Strategies. Abstract A97, p. 76. Los Cabos, Mexico, 2011.
-
(2011)
Abstracts of the International Workshop on HIV & Hepatitis Virus Drug Resistance and Curative Strategies
, pp. 76
-
-
McGovern, R.1
Symons, J.2
Poon, A.3
-
59
-
-
84864026622
-
The lowest X4 Geno2pheno false-positive rate is associated with greater CD4 depletion in HIV-1 infected patients
-
Santoro MM, Armenia D, Fabeni L, et al. The lowest X4 Geno2pheno false-positive rate is associated with greater CD4 depletion in HIV-1 infected patients. Clin Microbiol Infect 2012; 18: E289-98.
-
(2012)
Clin Microbiol Infect
, vol.18
-
-
Santoro, M.M.1
Armenia, D.2
Fabeni, L.3
-
60
-
-
41949124934
-
Deciphering human immunodeficiency virus type 1 transmission and early envelope diversification by single-genome amplification and sequencing
-
Salazar-Gonzalez JF, Bailes E, Pham KT, et al. Deciphering human immunodeficiency virus type 1 transmission and early envelope diversification by single-genome amplification and sequencing. J Virol 2008; 82: 3952-70.
-
(2008)
J Virol
, vol.82
, pp. 3952-3970
-
-
Salazar-Gonzalez, J.F.1
Bailes, E.2
Pham, K.T.3
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