-
1
-
-
0036179253
-
Comparative physiology of salt and water stress
-
Munns R, (2002) Comparative physiology of salt and water stress. Plant Cell Environ 25: 239-250.
-
(2002)
Plant Cell Environ
, vol.25
, pp. 239-250
-
-
Munns, R.1
-
5
-
-
33644647217
-
Comparative transcriptional profiling of two contrasting rice genotypes under salinity stress during the vegetative growth stage
-
Walia H, Wilson C, Condamine P, Liu X, Ismail A, et al. (2005) Comparative transcriptional profiling of two contrasting rice genotypes under salinity stress during the vegetative growth stage. Plant Physiol 139(2): 822-35.
-
(2005)
Plant Physiol
, vol.139
, Issue.2
, pp. 822-835
-
-
Walia, H.1
Wilson, C.2
Condamine, P.3
Liu, X.4
Ismail, A.5
-
6
-
-
0036489815
-
RFLP and SSLP mapping of salinity tolerance genes in chromosome 1 of rice (Oryza sativa L.) using recombinant inbred lines
-
Bonilla P, Dvorak J, Mackill D, Deal K, Gregorio G, (2002) RFLP and SSLP mapping of salinity tolerance genes in chromosome 1 of rice (Oryza sativa L.) using recombinant inbred lines. Philippine Agricultural Scientist 85: 68-76.
-
(2002)
Philippine Agricultural Scientist
, vol.85
, pp. 68-76
-
-
Bonilla, P.1
Dvorak, J.2
Mackill, D.3
Deal, K.4
Gregorio, G.5
-
7
-
-
80054121411
-
Differential salinity-induced variations in the activity of H+-pumps and Na+/H+ antiporters that are involved in cytoplasm ion homeostasis as a function of genotype and tolerance level in rice cell lines
-
Pons R, Cornejo M, Sanz A, (2011) Differential salinity-induced variations in the activity of H+-pumps and Na+/H+ antiporters that are involved in cytoplasm ion homeostasis as a function of genotype and tolerance level in rice cell lines. Plant Physiology and Biochemistry 49(12): 1399-1409.
-
(2011)
Plant Physiology and Biochemistry
, vol.49
, Issue.2
, pp. 1399-1409
-
-
Pons, R.1
Cornejo, M.2
Sanz, A.3
-
9
-
-
28444441250
-
Cold, salinity and drought stresses: An overview
-
Mahajan S, Tuteja N (2005) Cold, salinity and drought stresses: An overview. Arch. Biochem. Biophys. 444, 139-158.
-
(2005)
Arch. Biochem. Biophys
, vol.444
, pp. 139-158
-
-
Mahajan, S.1
Tuteja, N.2
-
10
-
-
3042801230
-
The MKK2 pathway mediates cold and salt stress signaling in Arabidopsis
-
Teige M, Scheikl E, Eulgem T, Doczi R, Ichimura K, et al. (2004) The MKK2 pathway mediates cold and salt stress signaling in Arabidopsis. Mol. Cell 15(1), 141-52.
-
(2004)
Mol. Cell
, vol.15
, Issue.1
, pp. 141-152
-
-
Teige, M.1
Scheikl, E.2
Eulgem, T.3
Doczi, R.4
Ichimura, K.5
-
11
-
-
33748761404
-
Diverse signals converge at MAPK cascades in plant
-
Zhang T, Liu Y, Yang T, Zhang L, Xu S, et al. (2006). Diverse signals converge at MAPK cascades in plant. Plant Physiol. Biochem. 44, 274-283.
-
(2006)
Plant Physiol. Biochem
, vol.44
, pp. 274-283
-
-
Zhang, T.1
Liu, Y.2
Yang, T.3
Zhang, L.4
Xu, S.5
-
12
-
-
6244268962
-
Quaternary ammonium and tertiary sulfonium compounds in higher-plants
-
Rhodes D, Hanson AD (1993). Quaternary ammonium and tertiary sulfonium compounds in higher-plants. Annu. Rev. Plant Physiol. Plant Mol. Biol. 44, 357-384.
-
(1993)
Annu. Rev. Plant Physiol. Plant Mol. Biol
, vol.44
, pp. 357-384
-
-
Rhodes, D.1
Hanson, A.D.2
-
13
-
-
2442433804
-
Phospholipase D is a negative regulator of proline biosynthesis in Arabidopsis thaliana
-
Thiery L, Leprince A, Lefebvre D, Ghars MA, Debabieux E, et al. (2004) Phospholipase D is a negative regulator of proline biosynthesis in Arabidopsis thaliana. J. Biol. Chem. 279, 14812-14818.
-
(2004)
J. Biol. Chem
, vol.279
, pp. 14812-14818
-
-
Thiery, L.1
Leprince, A.2
Lefebvre, D.3
Ghars, M.A.4
Debabieux, E.5
-
14
-
-
45249084300
-
Reactive oxygen signaling and abiotic stress
-
Miller G, Shulaev V, Mittler R, (2008) Reactive oxygen signaling and abiotic stress. Physiologia Plantarum 133(3): 481-489.
-
(2008)
Physiologia Plantarum
, vol.133
, Issue.2
, pp. 481-489
-
-
Miller, G.1
Shulaev, V.2
Mittler, R.3
-
15
-
-
33745699890
-
Stress responsive DEAD-box helicases: A new pathway to engineer plant stress tolerance
-
Vashisht AA, Tuteja N (2006). Stress responsive DEAD-box helicases: A new pathway to engineer plant stress tolerance. J. Phytochem. Photobiol. 84, 150-160.
-
(2006)
J. Phytochem. Photobiol
, vol.84
, pp. 150-160
-
-
Vashisht, A.A.1
Tuteja, N.2
-
16
-
-
35748933857
-
Mechanisms of High Salinity Tolerance in Plants
-
Narendra Tuteja, (2007) Mechanisms of High Salinity Tolerance in Plants. Methods in Enzymology 428: 419-438.
-
(2007)
Methods in Enzymology
, vol.428
, pp. 419-438
-
-
Narendra, T.1
-
17
-
-
0033588033
-
Salt tolerance conferred by overexpression of a vacuolar Na+/H+ antiport in Arabidopsis
-
Apse M, Aharon G, Snedden W, Blumwald E, (1999) Salt tolerance conferred by overexpression of a vacuolar Na+/H+ antiport in Arabidopsis. Science 285(5431): 1256-1258.
-
(1999)
Science
, vol.285
, Issue.2
, pp. 1256-1258
-
-
Apse, M.1
Aharon, G.2
Snedden, W.3
Blumwald, E.4
-
18
-
-
84892441730
-
NaCl Regulation of Plasma Membrane H+-ATPase Gene Expression in a Glycophyte and a Halophyte
-
Niu X, Narasimhan M, Salzman R, Bressan R, Hasegawa P, et al. (1996) NaCl Regulation of Plasma Membrane H+-ATPase Gene Expression in a Glycophyte and a Halophyte. Plant Physiol 111: 679-718.
-
(1996)
Plant Physiol
, vol.111
, pp. 679-718
-
-
Niu, X.1
Narasimhan, M.2
Salzman, R.3
Bressan, R.4
Hasegawa, P.5
-
19
-
-
27144445995
-
A rice quantitative trait locus for salt tolerance encodes a sodium transporter
-
Ren Z, Gao J, Li L, Cai X, Huang W, Chao D, et al. (2005) A rice quantitative trait locus for salt tolerance encodes a sodium transporter. Nature Genetics 37(10): 1141-1146.
-
(2005)
Nature Genetics
, vol.37
, Issue.2
, pp. 1141-1146
-
-
Ren, Z.1
Gao, J.2
Li, L.3
Cai, X.4
Huang, W.5
Chao, D.6
-
20
-
-
84863830771
-
A Two-Staged Model of Na(+) Exclusion in Rice Explained by 3D Modeling of HKT Transporters and Alternative Splicing
-
Cotsaftis O, Plett D, Shirley N, Tester M, Hrmova M, (2012) A Two-Staged Model of Na(+) Exclusion in Rice Explained by 3D Modeling of HKT Transporters and Alternative Splicing. PLoS One 7(7): e39865.
-
(2012)
PLoS One
, vol.7
, Issue.2
-
-
Cotsaftis, O.1
Plett, D.2
Shirley, N.3
Tester, M.4
Hrmova, M.5
-
21
-
-
0037023384
-
A draft sequence of the rice genome (Oryza sativa L. ssp indica)
-
Yu J, Hu S, Wang J, Wong G, Li S, et al. (2002) A draft sequence of the rice genome (Oryza sativa L. ssp indica). Science 296(5565): 79-82.
-
(2002)
Science
, vol.296
, Issue.2
, pp. 79-82
-
-
Yu, J.1
Hu, S.2
Wang, J.3
Wong, G.4
Li, S.5
-
22
-
-
20144366003
-
The Genomes of Oryza sativa: A history of duplications
-
Yu J, Wang J, Lin W, Li S, Li H, et al. (2005) The Genomes of Oryza sativa: A history of duplications. PLOS Biology 3(2): 266-281.
-
(2005)
PLOS Biology
, vol.3
, Issue.2
, pp. 266-281
-
-
Yu, J.1
Wang, J.2
Lin, W.3
Li, S.4
Li, H.5
-
23
-
-
0035028609
-
Gene expression profiles during the initial phase of salt stress in rice
-
Kawasaki S, Borchert C, Deyholos M, Wang H, Brazille S, et al. (2001) Gene expression profiles during the initial phase of salt stress in rice. Plant Cell 13: 889-905.
-
(2001)
Plant Cell
, vol.13
, pp. 889-905
-
-
Kawasaki, S.1
Borchert, C.2
Deyholos, M.3
Wang, H.4
Brazille, S.5
-
24
-
-
68149149538
-
A previously unknown zinc finger protein, DST, regulates drought and salt tolerance in rice via stomatal aperture control, Genes & Development
-
Huang X, Chao D, Gao J, Zhu M, Shi M, et al. (2009) A previously unknown zinc finger protein, DST, regulates drought and salt tolerance in rice via stomatal aperture control, Genes & Development. 23: 1805-1817.
-
(2009)
, vol.23
, pp. 1805-1817
-
-
Huang, X.1
Chao, D.2
Gao, J.3
Zhu, M.4
Shi, M.5
-
25
-
-
79953839774
-
Overexpression of a cytosolic glyceraldehyde-3-phosphate dehydrogenase gene OsGAPC3 confers salt tolerance in rice
-
Zhang X, Rao X, Shi H, Li R, Lu Y, (2011) Overexpression of a cytosolic glyceraldehyde-3-phosphate dehydrogenase gene OsGAPC3 confers salt tolerance in rice. Plant Cell Tiss Organ Cult 107: 1-11.
-
(2011)
Plant Cell Tiss Organ Cult
, vol.107
, pp. 1-11
-
-
Zhang, X.1
Rao, X.2
Shi, H.3
Li, R.4
Lu, Y.5
-
26
-
-
79961148618
-
Generation of chimeric repressors that confer salt tolerance in Arabidopsis and rice
-
Mito T, Seki M, Shinozaki K, Ohme-Takagi M, Matsui K, (2011) Generation of chimeric repressors that confer salt tolerance in Arabidopsis and rice. Plant Biotechnology Journal 9: 736-746.
-
(2011)
Plant Biotechnology Journal
, vol.9
, pp. 736-746
-
-
Mito, T.1
Seki, M.2
Shinozaki, K.3
Ohme-Takagi, M.4
Matsui, K.5
-
27
-
-
84872791026
-
Transcription factor OsHsfC1b regulates salt tolerance and development in Oryza sativa ssp
-
Schmidt R, Schippers JH, Welker A, Mieulet D, Guiderdoni E et al. (2012) Transcription factor OsHsfC1b regulates salt tolerance and development in Oryza sativa ssp. japonica, AoB Plants. pls011.
-
(2012)
Japonica, AoB Plants. pls
, pp. 011
-
-
Schmidt, R.1
Schippers, J.H.2
Welker, A.3
Mieulet, D.4
Guiderdoni, E.5
-
28
-
-
0031334221
-
Selection of relevant feature and examples in machine learning
-
Blum A, Langley P, (1997) Selection of relevant feature and examples in machine learning. Artificial Intelligence 97(1-2): 245-271.
-
(1997)
Artificial Intelligence
, vol.97
, Issue.2
, pp. 245-271
-
-
Blum, A.1
Langley, P.2
-
30
-
-
0037276175
-
Statistical tests for differential expression in cDNA microarray experiments, Genome Biology
-
Cui X, Churchill G, (2003) Statistical tests for differential expression in cDNA microarray experiments, Genome Biology. 4: 210.
-
(2003)
, vol.4
, pp. 210
-
-
Cui, X.1
Churchill, G.2
-
31
-
-
79960325818
-
Prediction of Drought-Resistant Genes in Arabidopsis thaliana Using SVM-RFE
-
Liang Y, Zhang F, Wang J, Joshi T, Wang Y, et al. (2011) Prediction of Drought-Resistant Genes in Arabidopsis thaliana Using SVM-RFE. PLoS ONE 6(7): e21750.
-
(2011)
PLoS ONE
, vol.6
, Issue.2
-
-
Liang, Y.1
Zhang, F.2
Wang, J.3
Joshi, T.4
Wang, Y.5
-
32
-
-
0032441150
-
Cluster analysis and display for genome-wide expression patterns
-
Eisen M, Spellman P, Brown P, Bostein D, (1998) Cluster analysis and display for genome-wide expression patterns. Proc Natl Acad Sci USA 95: 14863-14868.
-
(1998)
Proc Natl Acad Sci USA
, vol.95
, pp. 14863-14868
-
-
Eisen, M.1
Spellman, P.2
Brown, P.3
Bostein, D.4
-
33
-
-
0035931947
-
Gene expression profiles in hereditary breast cancer
-
Hedenfalk I, Duggan D, Chen Y, Radmacher M, Bittner M, et al. (2001) Gene expression profiles in hereditary breast cancer. The New England Journal of Medicine 344: 539-558.
-
(2001)
The New England Journal of Medicine
, vol.344
, pp. 539-558
-
-
Hedenfalk, I.1
Duggan, D.2
Chen, Y.3
Radmacher, M.4
Bittner, M.5
-
34
-
-
85008653486
-
An Intefrated Semi-Random Forests Based Approach to Gene Selection for Glioma Classification, Acta Biophys Sin
-
Lai H, Han B, Li L, Chen Y, Zhu L, (2010) An Intefrated Semi-Random Forests Based Approach to Gene Selection for Glioma Classification, Acta Biophys Sin. 26(9): 833-845.
-
(2010)
, vol.26
, Issue.2
, pp. 833-845
-
-
Lai, H.1
Han, B.2
Li, L.3
Chen, Y.4
Zhu, L.5
-
35
-
-
0036161259
-
Gene selection for cancer classification using support vector machines, Machine Learning
-
Guyon I, Weston J, Barnhill S, Vapnik V, (2002) Gene selection for cancer classification using support vector machines, Machine Learning. 46: 389-422.
-
(2002)
, vol.46
, pp. 389-422
-
-
Guyon, I.1
Weston, J.2
Barnhill, S.3
Vapnik, V.4
-
36
-
-
0037813165
-
An accelerated procedure for recursive feature ranking on Microarray Data
-
Furlanello C, Maria S, Serler M, Giuseppe J, (2003) An accelerated procedure for recursive feature ranking on Microarray Data. Neural Networks 16: 641-648.
-
(2003)
Neural Networks
, vol.16
, pp. 641-648
-
-
Furlanello, C.1
Maria, S.2
Serler, M.3
Giuseppe, J.4
-
37
-
-
17044374940
-
A variant of SVM-RFE for gene selection in cancer classification with expression data, Computational Intelligence in Bioinformatics and Computational Biology
-
Duan K, Rajapakse J, (2004) A variant of SVM-RFE for gene selection in cancer classification with expression data, Computational Intelligence in Bioinformatics and Computational Biology. CIBCB ′04. 7-8: 49-55.
-
(2004)
CIBCB ′04
, vol.7
, Issue.8
, pp. 49-55
-
-
Duan, K.1
Rajapakse, J.2
-
38
-
-
33947324308
-
Improving the performance of SVM-RFE to select genes in microarray data, BMC Bioinformatics
-
Ding Y, Wilkins D, (2006) Improving the performance of SVM-RFE to select genes in microarray data, BMC Bioinformatics. 7(Suppl 2): S12.
-
(2006)
, vol.7
-
-
Ding, Y.1
Wilkins, D.2
-
39
-
-
0035141021
-
Quantitative Trait Loci for Component Physiological Traits Determining Salt Tolerance in Rice, Plant Physiology
-
Koyama M, Levesley A, Koebner R, Flowers T, Yeo A, (2001) Quantitative Trait Loci for Component Physiological Traits Determining Salt Tolerance in Rice, Plant Physiology. 125: 406-422.
-
(2001)
, vol.125
, pp. 406-422
-
-
Koyama, M.1
Levesley, A.2
Koebner, R.3
Flowers, T.4
Yeo, A.5
-
40
-
-
0036184839
-
QTL Express: mapping quantitative trait loci in simple and complex pedigrees
-
Seaton G, Haley C, Knott S, Kearsey M, Visscher P, (2002) QTL Express: mapping quantitative trait loci in simple and complex pedigrees, Bioinformatics 18. (2): 339-340.
-
(2002)
Bioinformatics
, vol.18
, Issue.2
, pp. 339-340
-
-
Seaton, G.1
Haley, C.2
Knott, S.3
Kearsey, M.4
Visscher, P.5
-
41
-
-
77954299992
-
agriGO: a GO analysis toolkit for the agricultural community
-
Du Z, Zhou X, Ling Y, Zhang Z, Su Z, (2010) agriGO: a GO analysis toolkit for the agricultural community. Nucl Acids Res. 38: W64-W70.
-
(2010)
Nucl Acids Res
, vol.38
-
-
Du, Z.1
Zhou, X.2
Ling, Y.3
Zhang, Z.4
Su, Z.5
-
42
-
-
0022472686
-
Biological effects of the superoxide radical
-
Fridovich I, (1986) Biological effects of the superoxide radical. Arch. Biochem. Biophys 247: 1-11.
-
(1986)
Arch. Biochem. Biophys
, vol.247
, pp. 1-11
-
-
Fridovich, I.1
-
43
-
-
0000249563
-
Chilling-enhanced photooxidation: evidence for the role of singlet oxygen and superoxide in the breakdown of pigments and endogenous antioxidants
-
Wise R, Naylor A, (1987) Chilling-enhanced photooxidation: evidence for the role of singlet oxygen and superoxide in the breakdown of pigments and endogenous antioxidants. Plant Physiol 83: 278-282.
-
(1987)
Plant Physiol
, vol.83
, pp. 278-282
-
-
Wise, R.1
Naylor, A.2
-
44
-
-
0023886170
-
DNA damage and oxygen radical toxicity, Science
-
Imlay J, Linn S, (1988) DNA damage and oxygen radical toxicity, Science. 240: 1302-1309.
-
(1988)
, vol.240
, pp. 1302-1309
-
-
Imlay, J.1
Linn, S.2
-
45
-
-
17044385046
-
Recent advances in engineering plant tolerance to abiotic stress: Achievements and limitations
-
Vinocur B, Altman A (2005). Recent advances in engineering plant tolerance to abiotic stress: Achievements and limitations. Curr. Opin. Biotech. 16, 123-132.
-
(2005)
Curr. Opin. Biotech
, vol.16
, pp. 123-132
-
-
Vinocur1
Altman, A.2
-
46
-
-
0033670666
-
Changes in chlorophyll, ribulose biphosphate carboxylase-oxygenase, glycine betaine content, photosynthesis and transpiration in Amaranthus tricolor leaves during salt stress
-
Wang Y, Nil H, (2000) Changes in chlorophyll, ribulose biphosphate carboxylase-oxygenase, glycine betaine content, photosynthesis and transpiration in Amaranthus tricolor leaves during salt stress. J. Hortic. Sci. Biotechnol. 75: 623-627.
-
(2000)
J. Hortic. Sci. Biotechnol
, vol.75
, pp. 623-627
-
-
Wang, Y.1
Nil, H.2
-
47
-
-
80051742848
-
DIPOS: database of interacting proteins in Oryza sativa
-
Sapkota A, Liu X, Zhao X, Cao Y, Liu J, et al. (2011) DIPOS: database of interacting proteins in Oryza sativa. Mol. BioSyst. 7: 2615-2621.
-
(2011)
Mol. BioSyst
, vol.7
, pp. 2615-2621
-
-
Sapkota, A.1
Liu, X.2
Zhao, X.3
Cao, Y.4
Liu, J.5
-
48
-
-
79551587720
-
Cytoscape 2.8: new features for data integration and network visualization
-
Smoot M, Ono K, Ruscheinski J, Wang P, Ideker T, (2011) Cytoscape 2.8: new features for data integration and network visualization, Bioinformatics. 27(3): 431-432.
-
(2011)
Bioinformatics
, vol.27
, Issue.2
, pp. 431-432
-
-
Smoot, M.1
Ono, K.2
Ruscheinski, J.3
Wang, P.4
Ideker, T.5
-
50
-
-
0032546821
-
A calcium sensor homolog required for plant salt tolerance
-
Liu J, Zhu J, (1998) A calcium sensor homolog required for plant salt tolerance. Science 280 (5371): 1943-5.
-
(1998)
Science
, vol.280
, Issue.5371
, pp. 1943-1945
-
-
Liu, J.1
Zhu, J.2
-
51
-
-
0141502038
-
Regulation of ion homeostasis under salt stress
-
Zhu J (2003) Regulation of ion homeostasis under salt stress. Curr. Opin. Plant Biol. 6(5), 441-5.
-
(2003)
Curr. Opin. Plant Biol
, vol.6
, Issue.5
, pp. 441-445
-
-
Zhu, J.1
-
52
-
-
84855243970
-
Spermidine and abscisic acid-mediated phosphorylation of a cytoplasmic protein from rice root in response to salinity stress, Acta Physciologiae Plantarum
-
Gupta K, Gupta B, Ghosh B, Sengupta DN, (2012) Spermidine and abscisic acid-mediated phosphorylation of a cytoplasmic protein from rice root in response to salinity stress, Acta Physciologiae Plantarum. 34(1): 29-40.
-
(2012)
, vol.34
, Issue.2
, pp. 29-40
-
-
Gupta, K.1
Gupta, B.2
Ghosh, B.3
Sengupta, D.N.4
-
53
-
-
0032918558
-
Plant cis-acting regulatory DNA elements (PLACE) database: 1999
-
Higo K, Ugawa Y, Iwamoto M, Korenaga T, (1999) Plant cis-acting regulatory DNA elements (PLACE) database: 1999. Nucleic acids research 27(1): 297-300.
-
(1999)
Nucleic Acids Research
, vol.27
, Issue.2
, pp. 297-300
-
-
Higo, K.1
Ugawa, Y.2
Iwamoto, M.3
Korenaga, T.4
-
54
-
-
7644237447
-
The cauliflower mosaic virus 35S promoter extends into the transcribed region
-
Pauli S, Rothnie HM, Chen G, He X, Hohn T, (2004) The cauliflower mosaic virus 35S promoter extends into the transcribed region. J Virol. 78: 12120-12128.
-
(2004)
J Virol
, vol.78
, pp. 12120-12128
-
-
Pauli, S.1
Rothnie, H.M.2
Chen, G.3
He, X.4
Hohn, T.5
-
55
-
-
33846101405
-
The TIGR Rice Genome Annotation Resource: improvements and new features
-
Ouyang S, Zhu W, Hamilton J, Lin H, Campbell M, et al. (2007) The TIGR Rice Genome Annotation Resource: improvements and new features. Nucleic Acids Research 35: D883-D887.
-
(2007)
Nucleic Acids Research
, vol.35
-
-
Ouyang, S.1
Zhu, W.2
Hamilton, J.3
Lin, H.4
Campbell, M.5
-
56
-
-
69649109364
-
Circos: an Information Aesthetic for Comparative Genomics
-
Krzywinski M, Schein J, Birol I, Connors J, Gascoyne R, et al. (2009) Circos: an Information Aesthetic for Comparative Genomics. Genome Res 19: 1639-1645.
-
(2009)
Genome Res
, vol.19
, pp. 1639-1645
-
-
Krzywinski, M.1
Schein, J.2
Birol, I.3
Connors, J.4
Gascoyne, R.5
-
57
-
-
38549125550
-
How plants recognize pathogens and defend themselves
-
de Wit PJ, (2007) How plants recognize pathogens and defend themselves. Cell Mol Life Sci 64: 2726-32.
-
(2007)
Cell Mol Life Sci
, vol.64
, pp. 2726-2732
-
-
de Wit, P.J.1
-
58
-
-
33751100626
-
The plant immune system
-
Jones JD, Dang JL, (2006) The plant immune system. Nature 444: 323-9.
-
(2006)
Nature
, vol.444
, pp. 323-329
-
-
Jones, J.D.1
Dang, J.L.2
-
59
-
-
80855143800
-
A multi-layer evaluation approach for protein structure prediction and model quality assessment
-
Issue Supplement S10
-
Zhang J, Wang Q, Vantasin K, Zhang J, He Z, et al. (2011)A multi-layer evaluation approach for protein structure prediction and model quality assessment. Proteins Volume 79, Issue Supplement S10: 172-184.
-
(2011)
Proteins Volume
, vol.79
, pp. 172-184
-
-
Zhang, J.1
Wang, Q.2
Vantasin, K.3
Zhang, J.4
He, Z.5
-
60
-
-
77951234057
-
MUFOLD: A new solution for protein 3D structure prediction
-
Zhang J, Wang Q, Barz B, He Z, Kosztin I, et al. (2010) MUFOLD: A new solution for protein 3D structure prediction. Proteins 78(5): 1137-1152.
-
(2010)
Proteins
, vol.78
, Issue.2
, pp. 1137-1152
-
-
Zhang, J.1
Wang, Q.2
Barz, B.3
He, Z.4
Kosztin, I.5
-
61
-
-
0028076764
-
The ancient regulatory-protein family of WD-repeat proteins
-
Neer EJ, Schmidt CJ, Nambudripad R, Smith TF, (1994) The ancient regulatory-protein family of WD-repeat proteins. Nature 371(6495): 297-300.
-
(1994)
Nature
, vol.371
, Issue.2
, pp. 297-300
-
-
Neer, E.J.1
Schmidt, C.J.2
Nambudripad, R.3
Smith, T.F.4
-
62
-
-
34548606963
-
The structural basis for activation of plant immunity by bacterial effector protein AvrPto
-
Xing W, Zou Y, Liu Q, Liu J, Luo X, et al. (2007) The structural basis for activation of plant immunity by bacterial effector protein AvrPto. Nature 449(7159): 243-7.
-
(2007)
Nature
, vol.449
, Issue.2
, pp. 243-247
-
-
Xing, W.1
Zou, Y.2
Liu, Q.3
Liu, J.4
Luo, X.5
-
63
-
-
20444484092
-
Chemical regulation of abscisic acid catabolism in plants by cytochromeP450 inhibitors, Bioorganic & Medicinal Chemistry
-
Kitahata N, Saito S, Miyazawa Y, Umezawa T, Shimada Y, et al. (2005) Chemical regulation of abscisic acid catabolism in plants by cytochromeP450 inhibitors, Bioorganic & Medicinal Chemistry. 13(14): 4491-4498.
-
(2005)
, vol.13
, Issue.2
, pp. 4491-4498
-
-
Kitahata, N.1
Saito, S.2
Miyazawa, Y.3
Umezawa, T.4
Shimada, Y.5
-
64
-
-
33745853166
-
Upregulation of an Arabidopsis RING-H2 gene, XERICO, confers drought tolerance through increased abscisic acid biosynthesis
-
Ko J, Yang S, Han K, (2006) Upregulation of an Arabidopsis RING-H2 gene, XERICO, confers drought tolerance through increased abscisic acid biosynthesis. Plant Journal 47: 343-355.
-
(2006)
Plant Journal
, vol.47
, pp. 343-355
-
-
Ko, J.1
Yang, S.2
Han, K.3
-
65
-
-
34250897234
-
Ubiquitin hormones and biotic stress in plants
-
Dreher K, Callis J, (2007) Ubiquitin hormones and biotic stress in plants, Ann. Bot. (Lond.) 99: 787-822.
-
(2007)
Ann. Bot. (Lond.)
, vol.99
, pp. 787-822
-
-
Dreher, K.1
Callis, J.2
-
66
-
-
79955698254
-
Common and unique elements of the ABA-regulated transcriptome of Arabidopsis guard cells, BMC Genomics
-
Wang R, Pandey S, Li S, Gookin T, Zhao Z, et al. (2011) Common and unique elements of the ABA-regulated transcriptome of Arabidopsis guard cells, BMC Genomics. 12: 216.
-
(2011)
, vol.12
, pp. 216
-
-
Wang, R.1
Pandey, S.2
Li, S.3
Gookin, T.4
Zhao, Z.5
-
67
-
-
84864558776
-
Contrapuntal role of ABA: Does it mediate stress tolerance or plant growth retardation under long-term drought stress?
-
Sreenivasulu N, Harshavardhan V, Govind G, Seiler C, Kohli A, (2012) Contrapuntal role of ABA: Does it mediate stress tolerance or plant growth retardation under long-term drought stress?. Gene 506(2): 265-273.
-
(2012)
Gene
, vol.506
, Issue.2
, pp. 265-273
-
-
Sreenivasulu, N.1
Harshavardhan, V.2
Govind, G.3
Seiler, C.4
Kohli, A.5
-
68
-
-
0032557951
-
Antioxidant responses of rice seedlings to salinity stress, Plant Science
-
Dionisio-Sese M, Tobita S, (1998) Antioxidant responses of rice seedlings to salinity stress, Plant Science. 135(1): 1-9.
-
(1998)
, vol.135
, Issue.2
, pp. 1-9
-
-
Dionisio-Sese, M.1
Tobita, S.2
-
69
-
-
79961014521
-
Stress-induced flavonoid biosynthesis and the antioxidant machinery of plants, Plant Signal Behav
-
Fini A, Brunetti C, Ferdinando M, Ferrini F, Tattini M, (2011) Stress-induced flavonoid biosynthesis and the antioxidant machinery of plants, Plant Signal Behav. 6(5): 709-711.
-
(2011)
, vol.6
, Issue.2
, pp. 709-711
-
-
Fini, A.1
Brunetti, C.2
Ferdinando, M.3
Ferrini, F.4
Tattini, M.5
-
70
-
-
78650417577
-
The biosynthesis of flavonoids is enhanced similarly by UV radiation and root zone salinity in L. vulgare leaves
-
Agatia G, Biricoltib S, Guidic L, Ferrinib F, Finib A, et al. (2011) The biosynthesis of flavonoids is enhanced similarly by UV radiation and root zone salinity in L. vulgare leaves, Journal of Plant Physiology. 168(3): 204-212.
-
(2011)
Journal of Plant Physiology
, vol.168
, Issue.2
, pp. 204-212
-
-
Agatia, G.1
Biricoltib, S.2
Guidic, L.3
Ferrinib, F.4
Finib, A.5
-
71
-
-
79952038830
-
Overproduction of a rice aldo-keto reductase increases oxidative and heat stress tolerance by malondialdehyde and methylglyoxal detoxification, Plant Molecular Biology
-
Turóczy Z, Kis P, Török K, Cserháti M, Lendvai Á, et al. (2011) Overproduction of a rice aldo-keto reductase increases oxidative and heat stress tolerance by malondialdehyde and methylglyoxal detoxification, Plant Molecular Biology. 75(4-5): 399-412.
-
(2011)
, vol.75
, Issue.2
, pp. 399-412
-
-
Turóczy, Z.1
Kis, P.2
Török, K.3
Cserháti, M.4
Lendvai, Á.5
-
72
-
-
84864248675
-
Global transcriptome analysis reveals distinct expression among duplicated genes during sorghum-Bipolarissorghicola interaction, BMC Plant Biology
-
Mizuno H, Kawahigashi H, Kawahara Y, Kanamori H, Ogata J, et al. (2012) Global transcriptome analysis reveals distinct expression among duplicated genes during sorghum-Bipolarissorghicola interaction, BMC Plant Biology. 12: 121.
-
(2012)
, vol.12
, pp. 121
-
-
Mizuno, H.1
Kawahigashi, H.2
Kawahara, Y.3
Kanamori, H.4
Ogata, J.5
-
73
-
-
0036679053
-
Monitoring the expression profiles of 7000 Arabidopsis genes under drought, cold and high-salinity stresses using a full-length cDNA microarray, The Plant Journal
-
Seki M, Narusaka M, Ishida J, Nanjo T, Fujita M, (2002) Monitoring the expression profiles of 7000 Arabidopsis genes under drought, cold and high-salinity stresses using a full-length cDNA microarray, The Plant Journal. 31(3): 279-292.
-
(2002)
, vol.31
, Issue.2
, pp. 279-292
-
-
Seki, M.1
Narusaka, M.2
Ishida, J.3
Nanjo, T.4
Fujita, M.5
-
74
-
-
0346226428
-
Carbon partitioning and sucrose mettabolism in tomato plants growing udner salinity, Phsiol Plant
-
Balibera M, Amico J, Bolarin M, Perez-Alfocea F, (2000) Carbon partitioning and sucrose mettabolism in tomato plants growing udner salinity, Phsiol Plant. 110(4): 503-511.
-
(2000)
, vol.110
, Issue.2
, pp. 503-511
-
-
Balibera, M.1
Amico, J.2
Bolarin, M.3
Perez-Alfocea, F.4
-
75
-
-
33847273640
-
Global genome expression analysis of rice in response to drought and high-salinity stresses in shoot, flag leaf, and panicle, Plant Mol Biol
-
Zhou J, Wang X, Jiao Y, Qin Y, Liu X, et al. (2007) Global genome expression analysis of rice in response to drought and high-salinity stresses in shoot, flag leaf, and panicle, Plant Mol Biol. 63: 591-608.
-
(2007)
, vol.63
, pp. 591-608
-
-
Zhou, J.1
Wang, X.2
Jiao, Y.3
Qin, Y.4
Liu, X.5
-
76
-
-
71249099082
-
Time course analysis of gene regulation under cadmium stress in rice, Plant and soil 325
-
Ogawa I, Nakanishi H, Mori S, Nishizawa N, (2009) Time course analysis of gene regulation under cadmium stress in rice, Plant and soil 325. (1-2): 97-108.
-
(2009)
, vol.325
, Issue.1-2
, pp. 97-108
-
-
Ogawa, I.1
Nakanishi, H.2
Mori, S.3
Nishizawa, N.4
-
77
-
-
4644250687
-
The stress-induced Tfs1p requires NatB-mediated acetylation to inhibit carboxypeptidase Y and to regulate the protein kinase A pathway, Journal of Biological Chemistry
-
Caesar R, Blomberg A, (2004) The stress-induced Tfs1p requires NatB-mediated acetylation to inhibit carboxypeptidase Y and to regulate the protein kinase A pathway, Journal of Biological Chemistry. 279(37): 38532-38543.
-
(2004)
, vol.279
, Issue.2
, pp. 38532-38543
-
-
Caesar, R.1
Blomberg, A.2
-
78
-
-
78649851541
-
Wheat mitochondrial proteomes provide new links between antioxidant defense and plant salinity tolerance, Journal of Proteome Research
-
Jacoby R, Millar A, Taylor N, (2010) Wheat mitochondrial proteomes provide new links between antioxidant defense and plant salinity tolerance, Journal of Proteome Research. 9(12): 6595-604.
-
(2010)
, vol.9
, Issue.2
, pp. 6595-6604
-
-
Jacoby, R.1
Millar, A.2
Taylor, N.3
-
79
-
-
84907150192
-
The map based sequence of the rice genome
-
Khurana P, Gaikwad K, (2005) The map based sequence of the rice genome. Nature 436: 793-800.
-
(2005)
Nature
, vol.436
, pp. 793-800
-
-
Khurana, P.1
Gaikwad, K.2
-
80
-
-
79551572836
-
Root-Specific Transcript Profiling of Contrasting Rice Genotypes in Response to Salinity Stress
-
Cotsaftis O, Plett D, Johnson A, Walia H, Wilson C, et al. (2011) Root-Specific Transcript Profiling of Contrasting Rice Genotypes in Response to Salinity Stress, Molecular Plant 4. (1): 25-41.
-
(2011)
Molecular Plant
, vol.4
, Issue.1
, pp. 25-41
-
-
Cotsaftis, O.1
Plett, D.2
Johnson, A.3
Walia, H.4
Wilson, C.5
-
81
-
-
34249315763
-
Proteome and phosphoproteome differential expression under salinity stress in rice (Oryza sativa L.) roots
-
Chitteti BR, Peng Z, (2007) Proteome and phosphoproteome differential expression under salinity stress in rice (Oryza sativa L.) roots. J Proteome Res 6(5): 1718-1727.
-
(2007)
J Proteome Res
, vol.6
, Issue.2
, pp. 1718-1727
-
-
Chitteti, B.R.1
Peng, Z.2
-
82
-
-
0032782159
-
Phosphorylation upon cold stress in rice (Oryza sativa L.) seedlings
-
Komatsu S, Karibe H, Hamada T, Rakwal R, (1999) Phosphorylation upon cold stress in rice (Oryza sativa L.) seedlings, Theor Appl Genet. 98: 1304-1310.
-
(1999)
Theor Appl Genet
, vol.98
, pp. 1304-1310
-
-
Komatsu, S.1
Karibe, H.2
Hamada, T.3
Rakwal, R.4
-
83
-
-
79959679613
-
Phosphoproteins regulated by heat stress in rice leaves, Proteome Science
-
Chen X, Zhang W, Zhang B, Zhou J, Wang Y, et al. (2011) Phosphoproteins regulated by heat stress in rice leaves, Proteome Science. 9: 37.
-
(2011)
, vol.9
, pp. 37
-
-
Chen, X.1
Zhang, W.2
Zhang, B.3
Zhou, J.4
Wang, Y.5
-
84
-
-
28744458859
-
Bioconductor: open software development for computational biology and bioinformatics
-
Gentleman RC, Carey VJ, Bates DM, Bolstad B, Dettling M, et al. (2004) Bioconductor: open software development for computational biology and bioinformatics. Genome Biology 5(10): R80.
-
(2004)
Genome Biology
, vol.5
, Issue.2
-
-
Gentleman, R.C.1
Carey, V.J.2
Bates, D.M.3
Bolstad, B.4
Dettling, M.5
-
85
-
-
0037316303
-
A comparison of normalization methods for high density oligonucleotide array data based on bias and variance
-
Bolstad B, Irizarry R, Astrand M, Speed T, (2003) A comparison of normalization methods for high density oligonucleotide array data based on bias and variance. Bioinformatics 19(2): 185-193.
-
(2003)
Bioinformatics
, vol.19
, Issue.2
, pp. 185-193
-
-
Bolstad, B.1
Irizarry, R.2
Astrand, M.3
Speed, T.4
-
86
-
-
67849122320
-
MEME SUITE: tools for motif discovery and searching, Nucleic Acids Research
-
Bailey T, Bodén M, Buske F, Frith M, Grant C, (2009) MEME SUITE: tools for motif discovery and searching, Nucleic Acids Research. 37: W202-W208.
-
(2009)
, vol.37
-
-
Bailey, T.1
Bodén, M.2
Buske, F.3
Frith, M.4
Grant, C.5
-
87
-
-
79953300078
-
FIMO: Scanning for occurrences of a given motif, Bioinformatics
-
Grant C, Bailey T, Noble W, (2011) FIMO: Scanning for occurrences of a given motif, Bioinformatics. 27(7): 1017-1018.
-
(2011)
, vol.27
, Issue.2
, pp. 1017-1018
-
-
Grant, C.1
Bailey, T.2
Noble, W.3
-
88
-
-
34547588388
-
The SLiMDisc server: short, linear motif discovery in proteins
-
(Web Server issue)
-
Davey N, Edwards R, Shields D (2007) The SLiMDisc server: short, linear motif discovery in proteins. Nucleic Acids Res. 35(Web Server issue): W455-9.
-
(2007)
Nucleic Acids Res.
, vol.35
, pp. 455-459
-
-
Davey, N.1
Edwards, R.2
Shields, D.3
|