-
1
-
-
50649101663
-
DNA topoisomerases: Harnessing and constraining energy to govern chromosome topology
-
Schoeffler, A.J. and Berger, J.M. (2008) DNA topoisomerases: Harnessing and constraining energy to govern chromosome topology. Q. Rev. Biophys., 41, 41-101.
-
(2008)
Q. Rev. Biophys.
, vol.41
, pp. 41-101
-
-
Schoeffler, A.J.1
Berger, J.M.2
-
2
-
-
34247496263
-
Origin and evolution of DNA topoisomerases
-
Forterre, P., Gribaldo, S., Gadelle, D. and Serre, M.C. (2007) Origin and evolution of DNA topoisomerases. Biochimie, 89, 427-446.
-
(2007)
Biochimie
, vol.89
, pp. 427-446
-
-
Forterre, P.1
Gribaldo, S.2
Gadelle, D.3
Serre, M.C.4
-
3
-
-
81855198087
-
All tangled up: How cells direct, manage and exploit topoisomerase function
-
Vos, S.M., Tretter, E.M., Schmidt, B.H. and Berger, J.M. (2011) All tangled up: How cells direct, manage and exploit topoisomerase function. Nat. Rev. Mol. Cell. Biol., 12, 827-841.
-
(2011)
Nat. Rev. Mol. Cell. Biol.
, vol.12
, pp. 827-841
-
-
Vos, S.M.1
Tretter, E.M.2
Schmidt, B.H.3
Berger, J.M.4
-
4
-
-
0026428621
-
Crystal structure of an N-terminal fragment of the DNA gyrase B protein
-
Wigley, D.B., Davies, G.J., Dodson, E.J., Maxwell, A. and Dodson, G. (1991) Crystal structure of an N-terminal fragment of the DNA gyrase B protein. Nature, 351, 624-629.
-
(1991)
Nature
, vol.351
, pp. 624-629
-
-
Wigley, D.B.1
Davies, G.J.2
Dodson, E.J.3
Maxwell, A.4
Dodson, G.5
-
5
-
-
0141591551
-
Structure of the topoisomerase II ATPase region and its mechanism of inhibition by the chemotherapeutic agent ICRF-187
-
Classen, S., Olland, S. and Berger, J.M. (2003) Structure of the topoisomerase II ATPase region and its mechanism of inhibition by the chemotherapeutic agent ICRF-187. Proc. Natl Acad. Sci. USA, 100, 10629-10634.
-
(2003)
Proc. Natl Acad. Sci. USA
, vol.100
, pp. 10629-10634
-
-
Classen, S.1
Olland, S.2
Berger, J.M.3
-
6
-
-
0033985080
-
GHKL an emergent ATPase/kinase superfamily
-
Dutta, R. and Inouye, M. (2000) GHKL, an emergent ATPase/kinase superfamily. Trends Biochem. Sci., 25, 24-28.
-
(2000)
Trends Biochem. Sci.
, vol.25
, pp. 24-28
-
-
Dutta, R.1
Inouye, M.2
-
7
-
-
0032530488
-
Toprim - a conserved catalytic domain in type IA and II topoisomerases, DnaG-type primases, OLD family nucleases and RecR proteins
-
Aravind, L., Leipe, D.D. and Koonin, E.V. (1998) Toprim - a conserved catalytic domain in type IA and II topoisomerases, DnaG-type primases, OLD family nucleases and RecR proteins. Nucleic Acids Res., 26, 4205-4213.
-
(1998)
Nucleic Acids Res.
, vol.26
, pp. 4205-4213
-
-
Aravind, L.1
Leipe, D.D.2
Koonin, E.V.3
-
8
-
-
0030045003
-
Structure and mechanism of DNA topoisomerase II
-
Berger, J.M., Gamblin, S.J., Harrison, S.C. and Wang, J.C. (1996) Structure and mechanism of DNA topoisomerase II. Nature, 379, 225-232.
-
(1996)
Nature
, vol.379
, pp. 225-232
-
-
Berger, J.M.1
Gamblin, S.J.2
Harrison, S.C.3
Wang, J.C.4
-
9
-
-
0000301456
-
Crystal structure of the breakage-reunion domain of DNA gyrase
-
Morais Cabral, J.H., Jackson, A.P., Smith, C.V., Shikotra, N., Maxwell, A. and Liddington, R.C. (1997) Crystal structure of the breakage-reunion domain of DNA gyrase. Nature, 388, 903-906.
-
(1997)
Nature
, vol.388
, pp. 903-906
-
-
Morais Cabral, J.H.1
Jackson, A.P.2
Smith, C.V.3
Shikotra, N.4
Maxwell, A.5
Liddington, R.C.6
-
10
-
-
0001403311
-
A topoisomerase from Escherichia coli related to DNA gyrase
-
Brown, P.O., Peebles, C.L. and Cozzarelli, N.R. (1979) A topoisomerase from Escherichia coli related to DNA gyrase. Proc. Natl Acad. Sci. USA, 76, 6110-6114.
-
(1979)
Proc. Natl Acad. Sci. USA
, vol.76
, pp. 6110-6114
-
-
Brown, P.O.1
Peebles, C.L.2
Cozzarelli, N.R.3
-
11
-
-
0001373485
-
Nalidixic acid resistance: A second genetic character involved in DNA gyrase activity
-
Gellert, M., Mizuuchi, K., O'Dea, M.H., Itoh, T. and Tomizawa, J.I. (1977) Nalidixic acid resistance: A second genetic character involved in DNA gyrase activity. Proc. Natl Acad. Sci. USA, 74, 4772-4776.
-
(1977)
Proc. Natl Acad. Sci. USA
, vol.74
, pp. 4772-4776
-
-
Gellert, M.1
Mizuuchi, K.2
O'Dea, M.H.3
Itoh, T.4
Tomizawa, J.I.5
-
12
-
-
0029961651
-
DNA transport by a type II topoisomerase: Direct evidence for a two-gate mechanism
-
Roca, J., Berger, J.M., Harrison, S.C. and Wang, J.C. (1996) DNA transport by a type II topoisomerase: Direct evidence for a two-gate mechanism. Proc. Natl Acad. Sci. USA, 93, 4057-4062.
-
(1996)
Proc. Natl Acad. Sci. USA
, vol.93
, pp. 4057-4062
-
-
Roca, J.1
Berger, J.M.2
Harrison, S.C.3
Wang, J.C.4
-
13
-
-
0026448670
-
The capture of a DNA double helix by an ATP-dependent protein clamp: A key step in DNA transport by type II DNA topoisomerases
-
Roca, J. and Wang, J.C. (1992) The capture of a DNA double helix by an ATP-dependent protein clamp: A key step in DNA transport by type II DNA topoisomerases. Cell, 71, 833-840.
-
(1992)
Cell
, vol.71
, pp. 833-840
-
-
Roca, J.1
Wang, J.C.2
-
14
-
-
0028334718
-
DNA transport by a type II DNA topoisomerase: Evidence in favor of a two-gate mechanism
-
Roca, J. and Wang, J.C. (1994) DNA transport by a type II DNA topoisomerase: Evidence in favor of a two-gate mechanism. Cell, 77, 609-616.
-
(1994)
Cell
, vol.77
, pp. 609-616
-
-
Roca, J.1
Wang, J.C.2
-
15
-
-
0033550077
-
Probing the two-gate mechanism of DNA gyrase using cysteine cross-linking
-
Williams, N.L. and Maxwell, A. (1999) Probing the two-gate mechanism of DNA gyrase using cysteine cross-linking. Biochemistry, 38, 13502-13511.
-
(1999)
Biochemistry
, vol.38
, pp. 13502-13511
-
-
Williams, N.L.1
Maxwell, A.2
-
16
-
-
0032546611
-
Pre-steady-state analysis of ATP hydrolysis by Saccharomyces cerevisiae DNA topoisomerase II. 2 Kinetic mechanism for the sequential hydrolysis of two ATP
-
Harkins, T.T., Lewis, T.J. and Lindsley, J.E. (1998) Pre-steady-state analysis of ATP hydrolysis by Saccharomyces cerevisiae DNA topoisomerase II. 2. Kinetic mechanism for the sequential hydrolysis of two ATP. Biochemistry, 37, 7299-7312.
-
(1998)
Biochemistry
, vol.37
, pp. 7299-7312
-
-
Harkins, T.T.1
Lewis, T.J.2
Lindsley, J.E.3
-
17
-
-
0033587704
-
A model for the mechanism of strand passage by DNA gyrase
-
Kampranis, S.C., Bates, A.D. and Maxwell, A. (1999) A model for the mechanism of strand passage by DNA gyrase. Proc. Natl Acad. Sci. USA, 96, 8414-8419.
-
(1999)
Proc. Natl Acad. Sci. USA
, vol.96
, pp. 8414-8419
-
-
Kampranis, S.C.1
Bates, A.D.2
Maxwell, A.3
-
18
-
-
37549023863
-
Structural basis for gate-DNA recognition and bending by type IIA topoisomerases
-
Dong, K.C. and Berger, J.M. (2007) Structural basis for gate-DNA recognition and bending by type IIA topoisomerases. Nature, 450, 1201-1205.
-
(2007)
Nature
, vol.450
, pp. 1201-1205
-
-
Dong, K.C.1
Berger, J.M.2
-
19
-
-
0030451819
-
Crystal structure of an IHF-DNA complex: A protein-induced DNA U-turn
-
Rice, P.A., Yang, S., Mizuuchi, K. and Nash, H.A. (1996) Crystal structure of an IHF-DNA complex: A protein-induced DNA U-turn. Cell, 87, 1295-1306.
-
(1996)
Cell
, vol.87
, pp. 1295-1306
-
-
Rice, P.A.1
Yang, S.2
Mizuuchi, K.3
Nash, H.A.4
-
20
-
-
0041312645
-
Flexible DNA bending in HU-DNA cocrystal structures
-
Swinger, K.K., Lemberg, K.M., Zhang, Y. and Rice, P.A. (2003) Flexible DNA bending in HU-DNA cocrystal structures. EMBO J., 22, 3749-3760.
-
(2003)
EMBO J
, vol.22
, pp. 3749-3760
-
-
Swinger, K.K.1
Lemberg, K.M.2
Zhang, Y.3
Rice, P.A.4
-
21
-
-
77956343814
-
Structural basis of quinolone inhibition of type IIA topoisomerases and target-mediated resistance
-
Wohlkonig, A., Chan, P.F., Fosberry, A.P., Homes, P., Huang, J., Kranz, M., Leydon, V.R., Miles, T.J., Pearson, N.D., Perera, R.L. et al. (2010) Structural basis of quinolone inhibition of type IIA topoisomerases and target-mediated resistance. Nat. Struct. Mol. Biol., 17, 1152-1153.
-
(2010)
Nat. Struct. Mol. Biol.
, vol.17
, pp. 1152-1153
-
-
Wohlkonig, A.1
Chan, P.F.2
Fosberry, A.P.3
Homes, P.4
Huang, J.5
Kranz, M.6
Leydon, V.R.7
Miles, T.J.8
Pearson, N.D.9
Perera, R.L.10
-
22
-
-
77955917935
-
Type IIA topoisomerase inhibition by a new class of antibacterial agents
-
Bax, B.D., Chan, P.F., Eggleston, D.S., Fosberry, A., Gentry, D.R., Gorrec, F., Giordano, I., Hann, M.M., Hennessy, A., Hibbs, M. et al. (2010) Type IIA topoisomerase inhibition by a new class of antibacterial agents. Nature, 466, 935-940.
-
(2010)
Nature
, vol.466
, pp. 935-940
-
-
Bax, B.D.1
Chan, P.F.2
Eggleston, D.S.3
Fosberry, A.4
Gentry, D.R.5
Gorrec, F.6
Giordano, I.7
Hann, M.M.8
Hennessy, A.9
Hibbs, M.10
-
23
-
-
77955334540
-
Structural basis of gate-DNA breakage and resealing by type II topoisomerases
-
Laponogov, I., Pan, X.S., Veselkov, D.A., McAuley, K.E., Fisher, L.M. and Sanderson, M.R. (2010) Structural basis of gate-DNA breakage and resealing by type II topoisomerases. PLoS One, 5, e11338.
-
(2010)
PLoS One
, vol.5
-
-
Laponogov, I.1
Pan, X.S.2
Veselkov, D.A.3
McAuley, K.E.4
Fisher, L.M.5
Sanderson, M.R.6
-
24
-
-
77953229439
-
A novel and unified two-metal mechanism for DNA cleavage by type II and IA topoisomerases
-
Schmidt, B.H., Burgin, A.B., Deweese, J.E., Osheroff, N. and Berger, J.M. (2010) A novel and unified two-metal mechanism for DNA cleavage by type II and IA topoisomerases. Nature, 465, 641-644.
-
(2010)
Nature
, vol.465
, pp. 641-644
-
-
Schmidt, B.H.1
Burgin, A.B.2
Deweese, J.E.3
Osheroff, N.4
Berger, J.M.5
-
25
-
-
0035853134
-
Mechanism of topology simplification by type II DNA topoisomerases
-
Vologodskii, A.V., Zhang, W., Rybenkov, V.V., Podtelezhnikov, A.A., Subramanian, D., Griffith, J.D. and Cozzarelli, N.R. (2001) Mechanism of topology simplification by type II DNA topoisomerases. Proc. Natl Acad. Sci. USA, 98, 3045-3049.
-
(2001)
Proc. Natl Acad. Sci. USA
, vol.98
, pp. 3045-3049
-
-
Vologodskii, A.V.1
Zhang, W.2
Rybenkov, V.V.3
Podtelezhnikov, A.A.4
Subramanian, D.5
Griffith, J.D.6
Cozzarelli, N.R.7
-
26
-
-
80052187659
-
Direct measurement of DNA bending by type IIA topoisomerases: Implications for non-equilibrium topology simplification
-
Hardin, A.H., Sarkar, S.K., Seol, Y., Liou, G.F., Osheroff, N. and Neuman, K.C. (2011) Direct measurement of DNA bending by type IIA topoisomerases: Implications for non-equilibrium topology simplification. Nucleic Acids Res., 39, 5729-5743.
-
(2011)
Nucleic Acids Res.
, vol.39
, pp. 5729-5743
-
-
Hardin, A.H.1
Sarkar, S.K.2
Seol, Y.3
Liou, G.F.4
Osheroff, N.5
Neuman, K.C.6
-
27
-
-
0021099377
-
Gyrase DNA complexes visualized as looped structures by electron microscopy
-
Moore, C.L., Klevan, L., Wang, J.C. and Griffith, J.D. (1983) Gyrase . DNA complexes visualized as looped structures by electron microscopy. J. Biol. Chem., 258, 4612-4617.
-
(1983)
J. Biol. Chem.
, vol.258
, pp. 4612-4617
-
-
Moore, C.L.1
Klevan, L.2
Wang, J.C.3
Griffith, J.D.4
-
28
-
-
22544467771
-
The structural basis for substrate specificity in DNA topoisomerase IV
-
Corbett, K.D., Schoeffler, A.J., Thomsen, N.D. and Berger, J.M. (2005) The structural basis for substrate specificity in DNA topoisomerase IV. J. Mol. Biol., 351, 545-561.
-
(2005)
J. Mol. Biol.
, vol.351
, pp. 545-561
-
-
Corbett, K.D.1
Schoeffler, A.J.2
Thomsen, N.D.3
Berger, J.M.4
-
29
-
-
0023653150
-
Calcium-promoted DNA cleavage by eukaryotic topoisomerase II: Trapping the covalent enzyme-DNA complex in an active form
-
Osheroff, N. and Zechiedrich, E.L. (1987) Calcium-promoted DNA cleavage by eukaryotic topoisomerase II: Trapping the covalent enzyme-DNA complex in an active form. Biochemistry, 26, 4303-4309.
-
(1987)
Biochemistry
, vol.26
, pp. 4303-4309
-
-
Osheroff, N.1
Zechiedrich, E.L.2
-
30
-
-
0037119393
-
Studies of a positive supercoiling machine. Nucleotide hydrolysis and a multifunctional 'latch' in the mechanism of reverse gyrase
-
Rodriguez, A.C. (2002) Studies of a positive supercoiling machine. Nucleotide hydrolysis and a multifunctional 'latch' in the mechanism of reverse gyrase. J. Biol. Chem., 277, 29865-29873.
-
(2002)
J. Biol. Chem.
, vol.277
, pp. 29865-29873
-
-
Rodriguez, A.C.1
-
31
-
-
4444256696
-
Resolution of DNA molecules by one-dimensional agarose-gel electrophoresis
-
Bjornsti, M.A. and Megonigal, M.D. (1999) Resolution of DNA molecules by one-dimensional agarose-gel electrophoresis. Methods Mol. Biol., 94, 9-17.
-
(1999)
Methods Mol. Biol.
, vol.94
, pp. 9-17
-
-
Bjornsti, M.A.1
Megonigal, M.D.2
-
32
-
-
84863205849
-
NIH Image to ImageJ: 25 years of image analysis
-
Schneider, C.A., Rasband, W.S. and Eliceiri, K.W. (2012) NIH Image to ImageJ: 25 years of image analysis. Nat. Methods, 9, 671-675.
-
(2012)
Nat. Methods
, vol.9
, pp. 671-675
-
-
Schneider, C.A.1
Rasband, W.S.2
Eliceiri, K.W.3
-
33
-
-
0027520798
-
On the coupling between ATP usage and DNA transport by yeast DNA topoisomerase II
-
Lindsley, J.E. and Wang, J.C. (1993) On the coupling between ATP usage and DNA transport by yeast DNA topoisomerase II. J. Biol. Chem., 268, 8096-8104.
-
(1993)
J. Biol. Chem.
, vol.268
, pp. 8096-8104
-
-
Lindsley, J.E.1
Wang, J.C.2
-
34
-
-
0025690281
-
Characterization of the ATP binding site on Escherichia coli DNA gyrase Affinity labeling of Lys-103 and Lys-110 of the B subunit by pyridoxal 50-diphospho-50-adenosine
-
Tamura, J.K. and Gellert, M. (1990) Characterization of the ATP binding site on Escherichia coli DNA gyrase. Affinity labeling of Lys-103 and Lys-110 of the B subunit by pyridoxal 50-diphospho-50-adenosine. J. Biol. Chem., 265, 21342-21349.
-
(1990)
J. Biol. Chem.
, vol.265
, pp. 21342-21349
-
-
Tamura, J.K.1
Gellert, M.2
-
35
-
-
34547096540
-
DNA topoisomerase II selects DNA cleavage sites based on reactivity rather than binding affinity
-
Mueller-Planitz, F. and Herschlag, D. (2007) DNA topoisomerase II selects DNA cleavage sites based on reactivity rather than binding affinity. Nucleic Acids Res., 35, 3764-3773.
-
(2007)
Nucleic Acids Res.
, vol.35
, pp. 3764-3773
-
-
Mueller-Planitz, F.1
Herschlag, D.2
-
36
-
-
0025261344
-
Application of fluorescence energy transfer and polarization to monitor Escherichia coli cAMP receptor protein and lac promoter interaction
-
Heyduk, T. and Lee, J.C. (1990) Application of fluorescence energy transfer and polarization to monitor Escherichia coli cAMP receptor protein and lac promoter interaction. Proc. Natl Acad. Sci. USA, 87, 1744-1748.
-
(1990)
Proc. Natl Acad. Sci. USA
, vol.87
, pp. 1744-1748
-
-
Heyduk, T.1
Lee, J.C.2
-
37
-
-
67349272340
-
Structural insight into the quinolone-DNA cleavage complex of type IIA topoisomerases
-
Laponogov, I., Sohi, M.K., Veselkov, D.A., Pan, X.S., Sawhney, R., Thompson, A.W., McAuley, K.E., Fisher, L.M. and Sanderson, M.R. (2009) Structural insight into the quinolone-DNA cleavage complex of type IIA topoisomerases. Nat. Struct. Mol. Biol., 16, 667-669.
-
(2009)
Nat. Struct. Mol. Biol.
, vol.16
, pp. 667-669
-
-
Laponogov, I.1
Sohi, M.K.2
Veselkov, D.A.3
Pan, X.S.4
Sawhney, R.5
Thompson, A.W.6
McAuley, K.E.7
Fisher, L.M.8
Sanderson, M.R.9
-
38
-
-
79960676884
-
Structural basis of type II topoisomerase inhibition by the anticancer drug etoposide
-
Wu, C.C., Li, T.K., Farh, L., Lin, L.Y., Lin, T.S., Yu, Y.J., Yen, T.J., Chiang, C.W. and Chan, N.L. (2011) Structural basis of type II topoisomerase inhibition by the anticancer drug etoposide. Science, 333, 459-462.
-
(2011)
Science
, vol.333
, pp. 459-462
-
-
Wu, C.C.1
Li, T.K.2
Farh, L.3
Lin, L.Y.4
Lin, T.S.5
Yu, Y.J.6
Yen, T.J.7
Chiang, C.W.8
Chan, N.L.9
-
39
-
-
0028858007
-
Roles of topoisomerase IV and DNA gyrase in DNA unlinking during replication in Escherichia coli
-
Zechiedrich, E.L. and Cozzarelli, N.R. (1995) Roles of topoisomerase IV and DNA gyrase in DNA unlinking during replication in Escherichia coli. Genes Dev., 9, 2859-2869.
-
(1995)
Genes Dev.
, vol.9
, pp. 2859-2869
-
-
Zechiedrich, E.L.1
Cozzarelli, N.R.2
-
40
-
-
0027171678
-
Decatenation activity of topoisomerase IV during oriC and pBR322 DNA replication in vitro
-
Peng, H. and Marians, K.J. (1993) Decatenation activity of topoisomerase IV during oriC and pBR322 DNA replication in vitro. Proc. Natl Acad. Sci. USA, 90, 8571-8575.
-
(1993)
Proc. Natl Acad. Sci. USA
, vol.90
, pp. 8571-8575
-
-
Peng, H.1
Marians, K.J.2
-
41
-
-
0034669232
-
Preferential relaxation of positively supercoiled DNA by E coli topoisomerase IV in single-molecule and ensemble measurements
-
Crisona, N.J., Strick, T.R., Bensimon, D., Croquette, V. and Cozzarelli, N.R. (2000) Preferential relaxation of positively supercoiled DNA by E coli topoisomerase IV in single-molecule and ensemble measurements. Genes Dev., 14, 2881-2892.
-
(2000)
Genes Dev.
, vol.14
, pp. 2881-2892
-
-
Crisona, N.J.1
Strick, T.R.2
Bensimon, D.3
Croquette, V.4
Cozzarelli, N.R.5
-
42
-
-
0019332581
-
Covalent bonds between protein and DNA Formation of phosphotyrosine linkage between certain DNA topoisomerases and DNA
-
Tse, Y.C., Kirkegaard, K. and Wang, J.C. (1980) Covalent bonds between protein and DNA. Formation of phosphotyrosine linkage between certain DNA topoisomerases and DNA. J. Biol. Chem., 255, 5560-5565.
-
(1980)
J. Biol. Chem.
, vol.255
, pp. 5560-5565
-
-
Tse, Y.C.1
Kirkegaard, K.2
Wang, J.C.3
-
43
-
-
0018422012
-
Site-specific cleavage of DNA by E coli DNA gyrase
-
Morrison, A. and Cozzarelli, N.R. (1979) Site-specific cleavage of DNA by E coli DNA gyrase. Cell, 17, 175-184.
-
(1979)
Cell
, vol.17
, pp. 175-184
-
-
Morrison, A.1
Cozzarelli, N.R.2
-
44
-
-
0019322527
-
DNA gyrase subunit stoichiometry and the covalent attachment of subunit A to DNA during DNA cleavage
-
Sugino, A., Higgins, N.P. and Cozzarelli, N.R. (1980) DNA gyrase subunit stoichiometry and the covalent attachment of subunit A to DNA during DNA cleavage. Nucleic Acids Res., 8, 3865-3874.
-
(1980)
Nucleic Acids Res.
, vol.8
, pp. 3865-3874
-
-
Sugino, A.1
Higgins, N.P.2
Cozzarelli, N.R.3
-
45
-
-
0028806614
-
The interaction of Escherichia coli topoisomerase IV with DNA
-
Peng, H. and Marians, K.J. (1995) The interaction of Escherichia coli topoisomerase IV with DNA. J. Biol. Chem., 270, 25286-25290.
-
(1995)
J. Biol. Chem.
, vol.270
, pp. 25286-25290
-
-
Peng, H.1
Marians, K.J.2
-
46
-
-
0037057630
-
Initiation and re-initiation of DNA unwinding by the Escherichia coli Rep helicase
-
Ha, T., Rasnik, I., Cheng, W., Babcock, H.P., Gauss, G.H., Lohman, T.M. and Chu, S. (2002) Initiation and re-initiation of DNA unwinding by the Escherichia coli Rep helicase. Nature, 419, 638-641.
-
(2002)
Nature
, vol.419
, pp. 638-641
-
-
Ha, T.1
Rasnik, I.2
Cheng, W.3
Babcock, H.P.4
Gauss, G.H.5
Lohman, T.M.6
Chu, S.7
-
47
-
-
0012127194
-
DNA gyrase action involves the introduction of transient doublestrand breaks into DNA
-
Mizuuchi, K., Fisher, L.M., O'Dea, M.H. and Gellert, M. (1980) DNA gyrase action involves the introduction of transient doublestrand breaks into DNA. Proc. Natl Acad. Sci. USA, 77, 1847-1851.
-
(1980)
Proc. Natl Acad. Sci. USA
, vol.77
, pp. 1847-1851
-
-
Mizuuchi, K.1
Fisher, L.M.2
O'Dea, M.H.3
Gellert, M.4
-
48
-
-
0018882091
-
Type II DNA topoisomerases: Enzymes that can unknot a topologically knotted DNA molecule via a reversible double-strand break
-
Liu, L.F., Liu, C.C. and Alberts, B.M. (1980) Type II DNA topoisomerases: Enzymes that can unknot a topologically knotted DNA molecule via a reversible double-strand break. Cell, 19, 697-707.
-
(1980)
Cell
, vol.19
, pp. 697-707
-
-
Liu, L.F.1
Liu, C.C.2
Alberts, B.M.3
-
49
-
-
0020490617
-
Yeast DNA topoisomerase II An ATP-dependent type II topoisomerase that catalyzes the catenation, decatenation, unknotting, and relaxation of doublestranded DNA rings
-
Goto, T. and Wang, J.C. (1982) Yeast DNA topoisomerase II. An ATP-dependent type II topoisomerase that catalyzes the catenation, decatenation, unknotting, and relaxation of doublestranded DNA rings. J. Biol. Chem., 257, 5866-5872.
-
(1982)
J. Biol. Chem.
, vol.257
, pp. 5866-5872
-
-
Goto, T.1
Wang, J.C.2
-
50
-
-
0018876228
-
DNA gyrase and the supercoiling of DNA
-
Cozzarelli, N.R. (1980) DNA gyrase and the supercoiling of DNA. Science, 207, 953-960.
-
(1980)
Science
, vol.207
, pp. 953-960
-
-
Cozzarelli, N.R.1
-
51
-
-
0038782340
-
DNA gyrase: Subunit structure and ATPase activity of the purified enzyme
-
Mizuuchi, K., O'Dea, M.H. and Gellert, M. (1978) DNA gyrase: Subunit structure and ATPase activity of the purified enzyme. Proc. Natl Acad. Sci. USA, 75, 5960-5963.
-
(1978)
Proc. Natl Acad. Sci. USA
, vol.75
, pp. 5960-5963
-
-
Mizuuchi, K.1
O'Dea, M.H.2
Gellert, M.3
-
52
-
-
0023001151
-
Eukaryotic topoisomerase II Characterization of enzyme turnover
-
Osheroff, N. (1986) Eukaryotic topoisomerase II. Characterization of enzyme turnover. J. Biol. Chem., 261, 9944-9950.
-
(1986)
J. Biol. Chem.
, vol.261
, pp. 9944-9950
-
-
Osheroff, N.1
-
53
-
-
0032504252
-
Topoisomerase IV catalysis and the mechanism of quinolone action
-
Anderson, V.E., Gootz, T.D. and Osheroff, N. (1998) Topoisomerase IV catalysis and the mechanism of quinolone action. J. Biol. Chem., 273, 17879-17885.
-
(1998)
J. Biol. Chem.
, vol.273
, pp. 17879-17885
-
-
Anderson, V.E.1
Gootz, T.D.2
Osheroff, N.3
-
54
-
-
3242754359
-
DNA disentangling by type-2 topoisomerases
-
Buck, G.R. and Zechiedrich, E.L. (2004) DNA disentangling by type-2 topoisomerases. J. Mol. Biol., 340, 933-939.
-
(2004)
J. Mol. Biol.
, vol.340
, pp. 933-939
-
-
Buck, G.R.1
Zechiedrich, E.L.2
-
55
-
-
0030758268
-
Simplification of DNA topology below equilibrium values by type II topoisomerases
-
Rybenkov, V.V., Ullsperger, C., Vologodskii, A.V. and Cozzarelli, N.R. (1997) Simplification of DNA topology below equilibrium values by type II topoisomerases. Science, 277, 690-693.
-
(1997)
Science
, vol.277
, pp. 690-693
-
-
Rybenkov, V.V.1
Ullsperger, C.2
Vologodskii, A.V.3
Cozzarelli, N.R.4
-
56
-
-
84863168027
-
DNA cleavage and opening reactions of human topoisomerase IIalpha are regulated via Mg2+-mediated dynamic bending of gate-DNA
-
Lee, S., Jung, S.R., Heo, K., Byl, J.A., Deweese, J.E., Osheroff, N. and Hohng, S. (2012) DNA cleavage and opening reactions of human topoisomerase IIalpha are regulated via Mg2+-mediated dynamic bending of gate-DNA. Proc. Natl Acad. Sci. USA, 109, 2925-2930.
-
(2012)
Proc. Natl Acad. Sci. USA
, vol.109
, pp. 2925-2930
-
-
Lee, S.1
Jung, S.R.2
Heo, K.3
Byl, J.A.4
Deweese, J.E.5
Osheroff, N.6
Hohng, S.7
-
57
-
-
0021099884
-
DNA topoisomerase II from Drosophila melanogaster Relaxation of supercoiled DNA
-
Osheroff, N., Shelton, E.R. and Brutlag, D.L. (1983) DNA topoisomerase II from Drosophila melanogaster. Relaxation of supercoiled DNA. J. Biol. Chem., 258, 9536-9543.
-
(1983)
J. Biol. Chem.
, vol.258
, pp. 9536-9543
-
-
Osheroff, N.1
Shelton, E.R.2
Brutlag, D.L.3
-
58
-
-
0034724915
-
Communication between the ATPase and cleavage/religation domains of human topoisomerase IIalpha
-
Bjergbaek, L., Kingma, P., Nielsen, I.S., Wang, Y., Westergaard, O., Osheroff, N. and Andersen, A.H. (2000) Communication between the ATPase and cleavage/religation domains of human topoisomerase IIalpha. J. Biol. Chem., 275, 13041-13048.
-
(2000)
J. Biol. Chem.
, vol.275
, pp. 13041-13048
-
-
Bjergbaek, L.1
Kingma, P.2
Nielsen, I.S.3
Wang, Y.4
Westergaard, O.5
Osheroff, N.6
Andersen, A.H.7
-
59
-
-
84861534674
-
Mechanisms for defining the supercoiling setpoint of DNA gyrase orthologs I A non-conserved acidic C-terminal tail modulates E coli gyrase activity
-
Tretter, E.M. and Berger, J.M. (2012) Mechanisms for defining the supercoiling setpoint of DNA gyrase orthologs I. A non-conserved acidic C-terminal tail modulates E coli gyrase activity. J. Biol. Chem., 287, 18636-18644.
-
(2012)
J. Biol. Chem.
, vol.287
, pp. 18636-18644
-
-
Tretter, E.M.1
Berger, J.M.2
-
60
-
-
84869094439
-
Structure of a topoisomerase II-DNA-nucleotide complex reveals a new control mechanism for ATPase activity
-
Schmidt, B.H., Osheroff, N. and Berger, J.M. (2012) Structure of a topoisomerase II-DNA-nucleotide complex reveals a new control mechanism for ATPase activity. Nat. Struct. Mol. Biol., 19, 1147-1154.
-
(2012)
Nat. Struct. Mol. Biol.
, vol.19
, pp. 1147-1154
-
-
Schmidt, B.H.1
Osheroff, N.2
Berger, J.M.3
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