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Volumn 288, Issue 23, 2013, Pages 16645-16654

Large lateral movement of transmembrane helix S5 is not required for substrate access to the active site of rhomboid intramembrane protease

Author keywords

[No Author keywords available]

Indexed keywords

COCRYSTAL STRUCTURE; CONFORMATIONAL CHANGE; DETERGENT SOLUTION; MEMBRANE PROTEINS; MEMBRANE VESICLES; POLYTOPIC MEMBRANE PROTEINS; TRANS-MEMBRANE PROTEINS; TRANSMEMBRANE HELICES;

EID: 84878409837     PISSN: 00219258     EISSN: 1083351X     Source Type: Journal    
DOI: 10.1074/jbc.M112.438127     Document Type: Article
Times cited : (23)

References (40)
  • 1
    • 0037264371 scopus 로고    scopus 로고
    • The rhomboids: A nearly ubiquitous family of intramembrane serine proteases that probably evolved by multiple ancient horizontal gene transfers
    • Koonin, E. V., Makarova, K. S., Rogozin, I. B., Davidovic, L., Letellier, M. C., and Pellegrini, L. (2003) The rhomboids: a nearly ubiquitous family of intramembrane serine proteases that probably evolved by multiple ancient horizontal gene transfers. Genome Biol. 4, R19
    • (2003) Genome Biol. , vol.4
    • Koonin, E.V.1    Makarova, K.S.2    Rogozin, I.B.3    Davidovic, L.4    Letellier, M.C.5    Pellegrini, L.6
  • 2
    • 35948982252 scopus 로고    scopus 로고
    • Functional and evolutionary implications of enhanced genomic analysis of rhomboid intramembrane proteases
    • DOI 10.1101/gr.6425307
    • Lemberg, M. K., and Freeman, M. (2007) Functional and evolutionary implications of enhanced genomic analysis of rhomboid intramembrane proteases. Genome Res. 17, 1634-1646 (Pubitemid 350074859)
    • (2007) Genome Research , vol.17 , Issue.11 , pp. 1634-1646
    • Lemberg, M.K.1    Freeman, M.2
  • 3
    • 0035913908 scopus 로고    scopus 로고
    • Drosophila Rhomboid-1 defines a family of putative intramembrane serine proteases
    • DOI 10.1016/S0092-8674(01)00525-6
    • Urban, S., Lee, J. R., and Freeman, M. (2001) Drosophila Rhomboid-1 defines a family of putative intramembrane serine proteases. Cell 107, 173-182 (Pubitemid 33035944)
    • (2001) Cell , vol.107 , Issue.2 , pp. 173-182
    • Urban, S.1    Lee, J.R.2    Freeman, M.3
  • 6
    • 33750465167 scopus 로고    scopus 로고
    • Two Plasmodium rhomboid proteases preferentially cleave different adhesins implicated in all invasive stages of malaria
    • Baker, R. P., Wijetilaka, R., and Urban, S. (2006) Two Plasmodium rhomboid proteases preferentially cleave different adhesins implicated in all invasive stages of malaria. PLoS Pathog. 2, e113
    • (2006) PLoS Pathog. , vol.2
    • Baker, R.P.1    Wijetilaka, R.2    Urban, S.3
  • 7
    • 77954078996 scopus 로고    scopus 로고
    • Rhomboid 4 (ROM4) affects the processing of surface adhesins and facilitates host cell invasion by Toxoplasma gondii
    • Buguliskis, J. S., Brossier, F., Shuman, J., and Sibley, L. D. (2010) Rhomboid 4 (ROM4) affects the processing of surface adhesins and facilitates host cell invasion by Toxoplasma gondii. PLoS Pathog. 6, e1000858
    • (2010) PLoS Pathog. , vol.6
    • Buguliskis, J.S.1    Brossier, F.2    Shuman, J.3    Sibley, L.D.4
  • 8
    • 79251602713 scopus 로고    scopus 로고
    • Intramembrane cleavage of AMA1 triggers Toxoplasma to switch from an invasive to a replicative mode
    • Santos, J. M., Ferguson, D. J., Blackman, M. J., and Soldati-Favre, D. (2011) Intramembrane cleavage of AMA1 triggers Toxoplasma to switch from an invasive to a replicative mode. Science 331, 473-477
    • (2011) Science , vol.331 , pp. 473-477
    • Santos, J.M.1    Ferguson, D.J.2    Blackman, M.J.3    Soldati-Favre, D.4
  • 9
    • 0038700756 scopus 로고    scopus 로고
    • Mitochondrial membrane remodelling regulated by a conserved rhomboid protease
    • DOI 10.1038/nature01633
    • McQuibban, G. A., Saurya, S., and Freeman, M. (2003) Mitochondrial membrane remodelling regulated by a conserved rhomboid protease. Nature 423, 537-541 (Pubitemid 36648577)
    • (2003) Nature , vol.423 , Issue.6939 , pp. 537-541
    • McQuibban, G.A.1    Saurya, S.2    Freeman, M.3
  • 11
    • 40449124712 scopus 로고    scopus 로고
    • Hax1-mediated processing of HtrA2 by Parl allows survival of lymphocytes and neurons
    • DOI 10.1038/nature06604, PII NATURE06604
    • Chao, J. R., Parganas, E., Boyd, K., Hong, C. Y., Opferman, J. T., and Ihle, J. N. (2008) Hax1-mediated processing of HtrA2 by Parl allows survival of lymphocytes and neurons. Nature 452, 98-102 (Pubitemid 351355088)
    • (2008) Nature , vol.452 , Issue.7183 , pp. 98-102
    • Chao, J.-R.1    Parganas, E.2    Boyd, K.3    Hong, C.Y.4    Opferman, J.T.5    Ihle, J.N.6
  • 12
    • 79953269767 scopus 로고    scopus 로고
    • Rhomboid family pseudoproteases use the ER quality control machinery to regulate intercellular signaling
    • Zettl, M., Adrain, C., Strisovsky, K., Lastun, V., and Freeman, M. (2011) Rhomboid family pseudoproteases use the ER quality control machinery to regulate intercellular signaling. Cell 145, 79-91
    • (2011) Cell , vol.145 , pp. 79-91
    • Zettl, M.1    Adrain, C.2    Strisovsky, K.3    Lastun, V.4    Freeman, M.5
  • 13
    • 84855822415 scopus 로고    scopus 로고
    • Tumor necrosis factor signaling requires iRhom2 to promote trafficking and activation of TACE
    • Adrain, C., Zettl, M., Christova, Y., Taylor, N., and Freeman, M. (2012) Tumor necrosis factor signaling requires iRhom2 to promote trafficking and activation of TACE. Science 335, 225-228
    • (2012) Science , vol.335 , pp. 225-228
    • Adrain, C.1    Zettl, M.2    Christova, Y.3    Taylor, N.4    Freeman, M.5
  • 15
    • 33750886311 scopus 로고    scopus 로고
    • Crystal structure of a rhomboid family intramembrane protease
    • Wang, Y., Zhang, Y., and Ha, Y. (2006) Crystal structure of a rhomboid family intramembrane protease. Nature 444, 179-180
    • (2006) Nature , vol.444 , pp. 179-180
    • Wang, Y.1    Zhang, Y.2    Ha, Y.3
  • 20
    • 35748974498 scopus 로고    scopus 로고
    • The Role of L1 Loop in the Mechanism of Rhomboid Intramembrane Protease GlpG
    • DOI 10.1016/j.jmb.2007.10.014, PII S0022283607013356
    • Wang, Y., Maegawa, S., Akiyama, Y., and Ha, Y. (2007) The role of L1 loop in the mechanism of rhomboid intramembrane protease GlpG. J. Mol. Biol. 374, 1104-1113 (Pubitemid 350052106)
    • (2007) Journal of Molecular Biology , vol.374 , Issue.4 , pp. 1104-1113
    • Wang, Y.1    Maegawa, S.2    Akiyama, Y.3    Ha, Y.4
  • 21
    • 63649088506 scopus 로고    scopus 로고
    • Structure and mechanism of intramembrane protease
    • Ha, Y. (2009) Structure and mechanism of intramembrane protease. Semin. Cell Dev. Biol. 20, 240-250
    • (2009) Semin. Cell Dev. Biol. , vol.20 , pp. 240-250
    • Ha, Y.1
  • 23
    • 84860711067 scopus 로고    scopus 로고
    • Conformational change in rhomboid protease GlpG induced by inhibitor binding to its S′ subsites
    • Xue, Y., Chowdhury, S., Liu, X., Akiyama, Y., Ellman, J., and Ha, Y. (2012) Conformational change in rhomboid protease GlpG induced by inhibitor binding to its S′ subsites. Biochemistry 51, 3723-3731
    • (2012) Biochemistry , vol.51 , pp. 3723-3731
    • Xue, Y.1    Chowdhury, S.2    Liu, X.3    Akiyama, Y.4    Ellman, J.5    Ha, Y.6
  • 24
    • 84856292019 scopus 로고    scopus 로고
    • Catalytic mechanism of rhomboid protease GlpG probed by 3,4-dichloroisocoumarin and diisopropyl fluorophosphonate
    • Xue, Y., and Ha, Y. (2012) Catalytic mechanism of rhomboid protease GlpG probed by 3,4-dichloroisocoumarin and diisopropyl fluorophosphonate. J. Biol. Chem. 287, 3099-3107
    • (2012) J. Biol. Chem. , vol.287 , pp. 3099-3107
    • Xue, Y.1    Ha, Y.2
  • 25
    • 0031059866 scopus 로고    scopus 로고
    • Processing of X-ray diffraction data collected in oscillation mode
    • DOI 10.1016/S0076-6879(97)76066-X
    • Otwinowski, Z., and Minor, W. (1997) Processing of x-ray diffraction data collected in oscillation mode. Methods Enzymol. 276, 307-326 (Pubitemid 27085611)
    • (1997) Methods in Enzymology , vol.276 , pp. 307-326
    • Otwinowski, Z.1    Minor, W.2
  • 27
    • 0013461295 scopus 로고    scopus 로고
    • Macromolecular TLS Refinement in REFMAC at Moderate Resolutions
    • DOI 10.1016/S0076-6879(03)74014-2
    • Winn, M. D., Murshudov, G. N., and Papiz, M. Z. (2003) Macromolecular TLS refinement in REFMAC at moderate resolutions. Methods Enzymol. 374, 300-321 (Pubitemid 37531815)
    • (2003) Methods in Enzymology , vol.374 , pp. 300-321
    • Winn, M.D.1    Murshudov, G.N.2    Papiz, M.Z.3
  • 28
    • 84863205849 scopus 로고    scopus 로고
    • NIH Image to ImageJ: 25 Years of image analysis
    • Schneider, C. A., Rasband, W. S., and Eliceiri, K. W. (2012) NIH Image to ImageJ: 25 years of image analysis. Nat. Methods 9, 671-675
    • (2012) Nat. Methods , vol.9 , pp. 671-675
    • Schneider, C.A.1    Rasband, W.S.2    Eliceiri, K.W.3
  • 29
  • 31
    • 72149124813 scopus 로고    scopus 로고
    • Sequence-specific intramembrane proteolysis: Identification of a recognition motif in rhomboid substrates
    • Strisovsky, K., Sharpe, H. J., and Freeman, M. (2009) Sequence-specific intramembrane proteolysis: identification of a recognition motif in rhomboid substrates. Mol. Cell 36, 1048-1059
    • (2009) Mol. Cell , vol.36 , pp. 1048-1059
    • Strisovsky, K.1    Sharpe, H.J.2    Freeman, M.3
  • 32
    • 0019881763 scopus 로고
    • Disulphide bridges in globular proteins
    • Thornton, J. M. (1981) Disulphide bridges in globular proteins. J. Mol. Biol. 151, 261-287
    • (1981) J. Mol. Biol. , vol.151 , pp. 261-287
    • Thornton, J.M.1
  • 33
    • 0035813143 scopus 로고    scopus 로고
    • Determining the dimensions of the drug-binding domain of human P-glycoprotein using thiol cross-linking compounds as molecular rulers
    • Loo, T. W., and Clarke, D. M. (2001) Determining the dimensions of the drug-binding domain of human P-glycoprotein using thiol cross-linking compounds as molecular rulers. J. Biol. Chem. 276, 36877-36880
    • (2001) J. Biol. Chem. , vol.276 , pp. 36877-36880
    • Loo, T.W.1    Clarke, D.M.2
  • 34
    • 0034973193 scopus 로고    scopus 로고
    • Quantitative evaluation of the lengths of homobifunctional protein cross-linking reagents used as molecular rulers
    • DOI 10.1110/ps.51201
    • Green, N. S., Reisler, E., and Houk, K. N. (2001) Quantitative evaluation of the lengths of homobifunctional protein cross-linking reagents used as molecular rulers. Protein Sci. 10, 1293-1304 (Pubitemid 32568096)
    • (2001) Protein Science , vol.10 , Issue.7 , pp. 1293-1304
    • Green, N.S.1    Reisler, E.2    Houk, K.N.3
  • 35
    • 26644441432 scopus 로고    scopus 로고
    • Proteolytic action of GlpG, a rhomboid protease in the Escherichia coli cytoplasmic membrane
    • DOI 10.1021/bi051363k
    • Maegawa, S., Ito, K., and Akiyama, Y. (2005) Proteolytic action of GlpG, a rhomboid protease in the Escherichia coli cytoplasmic membrane. Biochemistry 44, 13543-13552 (Pubitemid 41443681)
    • (2005) Biochemistry , vol.44 , Issue.41 , pp. 13543-13552
    • Maegawa, S.1    Ito, K.2    Akiyama, Y.3
  • 36
    • 34247370690 scopus 로고    scopus 로고
    • The intramembrane active site of GlpG, an E. coli rhomboid protease, is accessible to water and hydrolyses an extramembrane peptide bond of substrates
    • DOI 10.1111/j.1365-2958.2007.05679.x
    • Maegawa, S., Koide, K., Ito, K., and Akiyama, Y. (2007) The intramembrane active site of GlpG, an E. coli rhomboid protease, is accessible to water and hydrolyses an extramembrane peptide bond of substrates. Mol. Microbiol. 64, 435-447 (Pubitemid 46632636)
    • (2007) Molecular Microbiology , vol.64 , Issue.2 , pp. 435-447
    • Maegawa, S.1    Koide, K.2    Ito, K.3    Akiyama, Y.4
  • 37
    • 79955526700 scopus 로고    scopus 로고
    • Mammalian EGF receptor activation by the rhomboid protease RHBDL2
    • Adrain, C., Strisovsky, K., Zettl, M., Hu, L., Lemberg, M. K., and Freeman, M. (2011) Mammalian EGF receptor activation by the rhomboid protease RHBDL2. EMBO Rep. 12, 421-427
    • (2011) EMBO Rep. , vol.12 , pp. 421-427
    • Adrain, C.1    Strisovsky, K.2    Zettl, M.3    Hu, L.4    Lemberg, M.K.5    Freeman, M.6
  • 38
    • 0021916465 scopus 로고
    • The effect of bilayer order and fluidity on detergent-induced liposome fusion
    • DOI 10.1016/0014-5793(85)80541-X
    • Saez, R., Goñi, F. M., and Alonso, A. (1985) The effect of bilayer order and fluidity on detergent-induced liposome fusion. FEBS Letters 179, 311-315 (Pubitemid 15161223)
    • (1985) FEBS Letters , vol.179 , Issue.2 , pp. 311-315
    • Saez, R.1    Goni, F.M.2    Alonso, A.3
  • 40
    • 84865328335 scopus 로고    scopus 로고
    • Architectural and thermodynamic principles underlying intramembrane protease function
    • Baker, R. P., and Urban, S. (2012) Architectural and thermodynamic principles underlying intramembrane protease function. Nat. Chem. Biol. 8, 759-768
    • (2012) Nat. Chem. Biol. , vol.8 , pp. 759-768
    • Baker, R.P.1    Urban, S.2


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