Patterns of regulatory activity across diverse human cell types predict tissue identity, transcription factor binding, and long-range interactions

Genome Research

Volumn 23, Issue 5, 2013, Pages 777-788

  Sheffield, Nathan C ^a   Thurman, Robert E ^b   Song, Lingyun ^a   Safi, Alexias ^a   Stamatoyannopoulos, John A ^b   Lenhard, Boris ^c,d,e   Crawford, Gregory E ^a,f   Furey, Terrence S ^g  

^a DUKE UNIVERSITY   (United States)

^b UNIVERSITY OF WASHINGTON   (United States)

^c UNIVERSITY OF BERGEN   (Norway)

^d Faculty of Medicine   (United Kingdom)

^e MRC CLINICAL SCIENCES CENTRE   (United Kingdom)

^f DUKE UNIVERSITY SCHOOL OF MEDICINE   (United States)

^g UNIVERSITY OF NORTH CAROLINA SCHOOL OF MEDICINE   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

BETA GLOBULIN; CHROMATIN ASSEMBLY FACTOR 1; DEOXYRIBONUCLEASE I; HEMOGLOBIN BETA CHAIN; HEPATOCYTE NUCLEAR FACTOR 4ALPHA; INTERFERON REGULATORY FACTOR; INTERFERON REGULATORY FACTOR 1; OCTAMER TRANSCRIPTION FACTOR 4; SOMATOMEDIN B; TRANSCRIPTION FACTOR; TRANSCRIPTION FACTOR AP 1; TRANSCRIPTION FACTOR CTCF; TRANSCRIPTION FACTOR GATA 1; TRANSCRIPTION FACTOR RUNX1; TRANSCRIPTION FACTOR SP1;

ARTICLE; B LYMPHOCYTE; CANCER CELL; CELL LINEAGE; CELL TYPE; CHROMATIN; CPG ISLAND; ERYTHROCYTE; GENE CLUSTER; GENE CONTROL; GENE EXPRESSION; GENE LOCUS; GENETIC ASSOCIATION; GENETIC CONSERVATION; HEMATOPOIETIC CELL; HUMAN; HUMAN CELL; LEUKEMIA CELL LINE; LYMPHOBLAST; MOLECULAR INTERACTION; MONOCYTE; PREDICTION; PRIORITY JOURNAL; PROMOTER REGION; PROTEIN ANALYSIS; PROTEIN BINDING; PROTEIN MOTIF; REGULATORY MECHANISM; SIGNAL TRANSDUCTION; T LYMPHOCYTE; TISSUE SPECIFICITY; X CHROMOSOME;

BINDING SITES; CELLS; CHROMATIN; CHROMOSOME MAPPING; DEOXYRIBONUCLEASE I; DNA-BINDING PROTEINS; GENE EXPRESSION REGULATION; GENOME, HUMAN; HUMANS; HYPERSENSITIVITY; ORGAN SPECIFICITY; PROTEIN BINDING; REGULATORY ELEMENTS, TRANSCRIPTIONAL; REGULATORY SEQUENCES, NUCLEIC ACID; TRANSCRIPTION FACTOR AP-1;

EID: 84877123760     PISSN: 10889051     EISSN: 15495469     Source Type: Journal    
DOI: 10.1101/gr.152140.112     Document Type: Article

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