ENCODE whole-genome data in the UCSC Genome Browser

Nucleic Acids Research

Volumn 38, Issue SUPPL.1, 2009, Pages

  Rosenbloom, Kate R ^a   Dreszer, Timothy R ^a   Pheasant, Michael ^a,b   Barber, Galt P ^a   Meyer, Laurence R ^a   Pohl, Andy ^a   Raney, Brian J ^a   Wang, Ting ^c   Hinrichs, Angie S ^a   Zweig, Ann S ^a   Fujita, Pauline A ^a   Learned, Katrina ^a   Rhead, Brooke ^a   Smith, Kayla E ^a   Kuhn, Robert M ^a   Karolchik, Donna ^a   Haussler, David ^a,d   Kent, W James ^a  

^a University of California Santa Cruz   (United States)

^b Queensland Facility for Advanced Bioinformatics   (Australia)

^c WASHINGTON UNIVERSITY SCHOOL OF MEDICINE   (United States)

^d UNIVERSITY OF CALIFORNIA   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ACCESS TO INFORMATION; ARTICLE; CATALOGING DATABASE; DATA MINING; GENETIC ANALYSIS; GENETIC DATABASE; HUMAN GENOME; ONLINE SYSTEM; PRIORITY JOURNAL; ANIMAL; BIOLOGY; COMPUTER PROGRAM; GENOMICS; HUMAN; INFORMATION RETRIEVAL; INTERNET; METHODOLOGY; MOUSE; NUCLEIC ACID DATABASE; SEQUENCE ALIGNMENT; TUMOR CELL LINE;

ANIMALS; CELL LINE, TUMOR; COMPUTATIONAL BIOLOGY; DATABASES, GENETIC; DATABASES, NUCLEIC ACID; GENOME, HUMAN; GENOMICS; HUMANS; INFORMATION STORAGE AND RETRIEVAL; INTERNET; MICE; SEQUENCE ALIGNMENT; SOFTWARE;

EID: 75549091651     PISSN: 03051048     EISSN: 13624962     Source Type: Journal    
DOI: 10.1093/nar/gkp961     Document Type: Article

References (8)

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4. Kent, W.J., Sugnet, C.W., Furey, T.S., Roskin, K.M., Pringle, T.H., Zahler, A.M. and Haussler, D. (2002) The human genome browser at UCSC. Genome Res., 12, 996-1006.
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6. Thomas, D.J., Rosenbloom, K.R., Clawson, H., Hinrichs, A.S., Trumbower, H., Raney, B.J., Karolchik, D., Barber, G.P., Harte, R.A., Hillman-Jackson, J. et al. (2007) The ENCODE project at UC Santa Cruz. Nucleic Acids Res., 35, D663-D667.
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8. Li, H., Handsaker, B., Wysoker, A., Fennell, T., Ruan, J., Homer, N., Marth, G., Abecasis, G. and Durbin, R. 1000 Genome Project Data Processing Subgroup. (2009) The Sequence Alignment/Map (SAM) Format and SAMtools. Bioinformatics, 25, 2078-2079.