-
1
-
-
34547753615
-
p63 and p73 in human cancer: defining the network
-
Deyoung MP, Ellisen LW, (2007) p63 and p73 in human cancer: defining the network. Oncogene 26: 5169-5183.
-
(2007)
Oncogene
, vol.26
, pp. 5169-5183
-
-
Deyoung, M.P.1
Ellisen, L.W.2
-
2
-
-
70350674206
-
Identification and functional characterization of two new transcriptional variants of the human p63 gene
-
Mangiulli M, Valletti A, Caratozzolo MF, Tullo A, Sbisa E, et al. (2009) Identification and functional characterization of two new transcriptional variants of the human p63 gene. Nucleic Acids Res 37: 6092-6104.
-
(2009)
Nucleic Acids Res
, vol.37
, pp. 6092-6104
-
-
Mangiulli, M.1
Valletti, A.2
Caratozzolo, M.F.3
Tullo, A.4
Sbisa, E.5
-
3
-
-
41749093206
-
p63 in prostate biology and pathology
-
Grisanzio C, Signoretti S, (2008) p63 in prostate biology and pathology. J Cell Biochem 103: 1354-1368.
-
(2008)
J Cell Biochem
, vol.103
, pp. 1354-1368
-
-
Grisanzio, C.1
Signoretti, S.2
-
4
-
-
23844459838
-
p63 regulates commitment to the prostate cell lineage
-
Signoretti S, Pires MM, Lindauer M, Horner JW, Grisanzio C, et al. (2005) p63 regulates commitment to the prostate cell lineage. Proc Natl Acad Sci U S A 102: 11355-11360.
-
(2005)
Proc Natl Acad Sci U S A
, vol.102
, pp. 11355-11360
-
-
Signoretti, S.1
Pires, M.M.2
Lindauer, M.3
Horner, J.W.4
Grisanzio, C.5
-
5
-
-
77955121375
-
Identification of a cell of origin for human prostate cancer
-
Goldstein AS, Huang J, Guo C, Garraway IP, Witte ON, (2010) Identification of a cell of origin for human prostate cancer. Science 329: 568-571.
-
(2010)
Science
, vol.329
, pp. 568-571
-
-
Goldstein, A.S.1
Huang, J.2
Guo, C.3
Garraway, I.P.4
Witte, O.N.5
-
6
-
-
70349438989
-
A luminal epithelial stem cell that is a cell of origin for prostate cancer
-
Wang X, Kruithof-de Julio M, Economides KD, Walker D, Yu H, et al. (2009) A luminal epithelial stem cell that is a cell of origin for prostate cancer. Nature 461: 495-500.
-
(2009)
Nature
, vol.461
, pp. 495-500
-
-
Wang, X.1
Kruithof-de Julio, M.2
Economides, K.D.3
Walker, D.4
Yu, H.5
-
7
-
-
70450198396
-
Epithelial-mesenchymal transitions in development and disease
-
Thiery JP, Acloque H, Huang RY, Nieto MA, (2009) Epithelial-mesenchymal transitions in development and disease. Cell 139: 871-890.
-
(2009)
Cell
, vol.139
, pp. 871-890
-
-
Thiery, J.P.1
Acloque, H.2
Huang, R.Y.3
Nieto, M.A.4
-
8
-
-
54449098848
-
Epithelial to mesenchymal transition of a primary prostate cell line with switches of cell adhesion modules but without malignant transformation
-
Ke XS, Qu Y, Goldfinger N, Rostad K, Hovland R, et al. (2008) Epithelial to mesenchymal transition of a primary prostate cell line with switches of cell adhesion modules but without malignant transformation. PLoS ONE 3: e3368.
-
(2008)
PLoS ONE
, vol.3
-
-
Ke, X.S.1
Qu, Y.2
Goldfinger, N.3
Rostad, K.4
Hovland, R.5
-
9
-
-
78649453710
-
Reprogramming of cell junction modules during stepwise epithelial to mesenchymal transition and accumulation of malignant features in vitro in a prostate cell model
-
Ke XS, Li WC, Hovland R, Qu Y, Liu RH, et al. (2011) Reprogramming of cell junction modules during stepwise epithelial to mesenchymal transition and accumulation of malignant features in vitro in a prostate cell model. Exp Cell Res 317: 234-247.
-
(2011)
Exp Cell Res
, vol.317
, pp. 234-247
-
-
Ke, X.S.1
Li, W.C.2
Hovland, R.3
Qu, Y.4
Liu, R.H.5
-
10
-
-
77957262381
-
Core epithelial-to-mesenchymal transition interactome gene-expression signature is associated with claudin-low and metaplastic breast cancer subtypes
-
Taube JH, Herschkowitz JI, Komurov K, Zhou AY, Gupta S, et al. (2010) Core epithelial-to-mesenchymal transition interactome gene-expression signature is associated with claudin-low and metaplastic breast cancer subtypes. Proc Natl Acad Sci U S A 107: 15449-15454.
-
(2010)
Proc Natl Acad Sci U S A
, vol.107
, pp. 15449-15454
-
-
Taube, J.H.1
Herschkowitz, J.I.2
Komurov, K.3
Zhou, A.Y.4
Gupta, S.5
-
11
-
-
84873050284
-
Regulatory networks defining EMT during cancer initiation and progression
-
Craene BD, Berx G, (2013) Regulatory networks defining EMT during cancer initiation and progression. Nat Rev Cancer 13: 97-110.
-
(2013)
Nat Rev Cancer
, vol.13
, pp. 97-110
-
-
Craene, B.D.1
Berx, G.2
-
12
-
-
79952811643
-
Role of DeltaNp63gamma in epithelial to mesenchymal transition
-
Lindsay J, McDade SS, Pickard A, McCloskey KD, McCance DJ, (2011) Role of DeltaNp63gamma in epithelial to mesenchymal transition. J Biol Chem 286: 3915-3924.
-
(2011)
J Biol Chem
, vol.286
, pp. 3915-3924
-
-
Lindsay, J.1
McDade, S.S.2
Pickard, A.3
McCloskey, K.D.4
McCance, D.J.5
-
13
-
-
61949432240
-
Comprehensive mutational analysis and mRNA isoform quantification of TP63 in normal and neoplastic human prostate cells
-
Parsons JK, Saria EA, Nakayama M, Vessella RL, Sawyers CL, et al. (2009) Comprehensive mutational analysis and mRNA isoform quantification of TP63 in normal and neoplastic human prostate cells. Prostate 69: 559-569.
-
(2009)
Prostate
, vol.69
, pp. 559-569
-
-
Parsons, J.K.1
Saria, E.A.2
Nakayama, M.3
Vessella, R.L.4
Sawyers, C.L.5
-
14
-
-
33744796255
-
p63 regulates an adhesion programme and cell survival in epithelial cells
-
Carroll DK, Carroll JS, Leong CO, Cheng F, Brown M, et al. (2006) p63 regulates an adhesion programme and cell survival in epithelial cells. Nat Cell Biol 8: 551-561.
-
(2006)
Nat Cell Biol
, vol.8
, pp. 551-561
-
-
Carroll, D.K.1
Carroll, J.S.2
Leong, C.O.3
Cheng, F.4
Brown, M.5
-
15
-
-
0033614998
-
Creation of human tumour cells with defined genetic elements
-
Hahn WC, Counter CM, Lundberg AS, Beijersbergen RL, Brooks MW, et al. (1999) Creation of human tumour cells with defined genetic elements. Nature 400: 464-468.
-
(1999)
Nature
, vol.400
, pp. 464-468
-
-
Hahn, W.C.1
Counter, C.M.2
Lundberg, A.S.3
Beijersbergen, R.L.4
Brooks, M.W.5
-
16
-
-
34249026300
-
High-resolution profiling of histone methylations in the human genome
-
Barski A, Cuddapah S, Cui K, Roh TY, Schones DE, et al. (2007) High-resolution profiling of histone methylations in the human genome. Cell 129: 823-837.
-
(2007)
Cell
, vol.129
, pp. 823-837
-
-
Barski, A.1
Cuddapah, S.2
Cui, K.3
Roh, T.Y.4
Schones, D.E.5
-
17
-
-
52649132425
-
Genome-wide identification of in vivo protein-DNA binding sites from ChIP-Seq data
-
Jothi R, Cuddapah S, Barski A, Cui K, Zhao K, (2008) Genome-wide identification of in vivo protein-DNA binding sites from ChIP-Seq data. Nucleic Acids Res 36: 5221-5231.
-
(2008)
Nucleic Acids Res
, vol.36
, pp. 5221-5231
-
-
Jothi, R.1
Cuddapah, S.2
Barski, A.3
Cui, K.4
Zhao, K.5
-
18
-
-
62349130698
-
Ultrafast and memory-efficient alignment of short DNA sequences to the human genome
-
Langmead B, Trapnell C, Pop M, Salzberg SL, (2009) Ultrafast and memory-efficient alignment of short DNA sequences to the human genome. Genome Biol 10: R25.
-
(2009)
Genome Biol
, vol.10
-
-
Langmead, B.1
Trapnell, C.2
Pop, M.3
Salzberg, S.L.4
-
19
-
-
53849146020
-
Model-based analysis of ChIP-Seq (MACS)
-
Zhang Y, Liu T, Meyer CA, Eeckhoute J, Johnson DS, et al. (2008) Model-based analysis of ChIP-Seq (MACS). Genome Biol 9: R137.
-
(2008)
Genome Biol
, vol.9
-
-
Zhang, Y.1
Liu, T.2
Meyer, C.A.3
Eeckhoute, J.4
Johnson, D.S.5
-
20
-
-
55749094855
-
An integrated software system for analyzing ChIP-chip and ChIP-seq data
-
Ji H, Jiang H, Ma W, Johnson DS, Myers RM, et al. (2008) An integrated software system for analyzing ChIP-chip and ChIP-seq data. Nat Biotechnol 26: 1293-1300.
-
(2008)
Nat Biotechnol
, vol.26
, pp. 1293-1300
-
-
Ji, H.1
Jiang, H.2
Ma, W.3
Johnson, D.S.4
Myers, R.M.5
-
21
-
-
84867305210
-
Genome-wide analysis of p63 binding sites identifies AP-2 factors as co-regulators of epidermal differentiation
-
McDade SS, Henry AE, Pivato GP, Kozarewa I, Mitsopoulos C, et al. (2012) Genome-wide analysis of p63 binding sites identifies AP-2 factors as co-regulators of epidermal differentiation. Nucleic Acids Res 40: 7190-7206.
-
(2012)
Nucleic Acids Res
, vol.40
, pp. 7190-7206
-
-
McDade, S.S.1
Henry, A.E.2
Pivato, G.P.3
Kozarewa, I.4
Mitsopoulos, C.5
-
22
-
-
61449172037
-
Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources
-
Huang da W, Sherman BT, Lempicki RA, (2009) Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources. Nat Protoc 4: 44-57.
-
(2009)
Nat Protoc
, vol.4
, pp. 44-57
-
-
da Huang, W.1
Sherman, B.T.2
Lempicki, R.A.3
-
23
-
-
58549112996
-
Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large gene lists
-
Huang da W, Sherman BT, Lempicki RA, (2009) Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large gene lists. Nucleic Acids Res 37: 1-13.
-
(2009)
Nucleic Acids Res
, vol.37
, pp. 1-13
-
-
da Huang, W.1
Sherman, B.T.2
Lempicki, R.A.3
-
24
-
-
77957371805
-
Genome-wide profiling of p63 DNA-binding sites identifies an element that regulates gene expression during limb development in the 7q21 SHFM1 locus
-
Kouwenhoven EN, van Heeringen SJ, Tena JJ, Oti M, Dutilh BE, et al. (2010) Genome-wide profiling of p63 DNA-binding sites identifies an element that regulates gene expression during limb development in the 7q21 SHFM1 locus. PLoS Genet 6: e1001065.
-
(2010)
PLoS Genet
, vol.6
-
-
Kouwenhoven, E.N.1
van Heeringen, S.J.2
Tena, J.J.3
Oti, M.4
Dutilh, B.E.5
-
25
-
-
57349178376
-
Restoration of E-cadherin cell-cell junctions requires both expression of E-cadherin and suppression of ERK MAP kinase activation in Ras-transformed breast epithelial cells
-
Li Q, Mattingly RR, (2008) Restoration of E-cadherin cell-cell junctions requires both expression of E-cadherin and suppression of ERK MAP kinase activation in Ras-transformed breast epithelial cells. Neoplasia 10: 1444-1458.
-
(2008)
Neoplasia
, vol.10
, pp. 1444-1458
-
-
Li, Q.1
Mattingly, R.R.2
-
26
-
-
84871385387
-
ZEB/miR-200 feedback loop: At the crossroads of signal transduction in cancer
-
Hill L, Browne G, Tulchinsky E (2012) ZEB/miR-200 feedback loop: At the crossroads of signal transduction in cancer. Int J Cancer.
-
(2012)
Int J Cancer
-
-
Hill, L.1
Browne, G.2
Tulchinsky, E.3
-
27
-
-
79953128406
-
Roles for microRNAs in the regulation of cell adhesion molecules
-
Valastyan S, Weinberg RA, (2011) Roles for microRNAs in the regulation of cell adhesion molecules. J Cell Sci 124: 999-1006.
-
(2011)
J Cell Sci
, vol.124
, pp. 999-1006
-
-
Valastyan, S.1
Weinberg, R.A.2
-
28
-
-
84871003536
-
miR-205 regulates basement membrane deposition in human prostate: implications for cancer development
-
Gandellini P, Profumo V, Casamichele A, Fenderico N, Borrelli S, et al. (2012) miR-205 regulates basement membrane deposition in human prostate: implications for cancer development. Cell Death Differ.
-
(2012)
Cell Death Differ
-
-
Gandellini, P.1
Profumo, V.2
Casamichele, A.3
Fenderico, N.4
Borrelli, S.5
-
29
-
-
84866546174
-
Loss of p63 and its microRNA-205 target results in enhanced cell migration and metastasis in prostate cancer
-
Tucci P, Agostini M, Grespi F, Markert EK, Terrinoni A, et al. (2012) Loss of p63 and its microRNA-205 target results in enhanced cell migration and metastasis in prostate cancer. Proc Natl Acad Sci U S A 109: 15312-15317.
-
(2012)
Proc Natl Acad Sci U S A
, vol.109
, pp. 15312-15317
-
-
Tucci, P.1
Agostini, M.2
Grespi, F.3
Markert, E.K.4
Terrinoni, A.5
-
30
-
-
79551469293
-
Coordinated epigenetic repression of the miR-200 family and miR-205 in invasive bladder cancer
-
Wiklund ED, Bramsen JB, Hulf T, Dyrskjot L, Ramanathan R, et al. (2011) Coordinated epigenetic repression of the miR-200 family and miR-205 in invasive bladder cancer. Int J Cancer 128: 1327-1334.
-
(2011)
Int J Cancer
, vol.128
, pp. 1327-1334
-
-
Wiklund, E.D.1
Bramsen, J.B.2
Hulf, T.3
Dyrskjot, L.4
Ramanathan, R.5
-
31
-
-
78649328949
-
Global profiling of histone and DNA methylation reveals epigenetic-based regulation of gene expression during epithelial to mesenchymal transition in prostate cells
-
Ke XS, Qu Y, Cheng Y, Li WC, Rotter V, et al. (2010) Global profiling of histone and DNA methylation reveals epigenetic-based regulation of gene expression during epithelial to mesenchymal transition in prostate cells. BMC Genomics 11: 669.
-
(2010)
BMC Genomics
, vol.11
, pp. 669
-
-
Ke, X.S.1
Qu, Y.2
Cheng, Y.3
Li, W.C.4
Rotter, V.5
-
32
-
-
77956627856
-
Intraepithelial p63-dependent expression of distinct components of cell adhesion complexes in normal esophageal mucosa and squamous cell carcinoma
-
Thepot A, Hautefeuille A, Cros MP, Abedi-Ardekani B, Petre A, et al. (2010) Intraepithelial p63-dependent expression of distinct components of cell adhesion complexes in normal esophageal mucosa and squamous cell carcinoma. Int J Cancer 127: 2051-2062.
-
(2010)
Int J Cancer
, vol.127
, pp. 2051-2062
-
-
Thepot, A.1
Hautefeuille, A.2
Cros, M.P.3
Abedi-Ardekani, B.4
Petre, A.5
-
33
-
-
84871586080
-
A molecular roadmap of reprogramming somatic cells into iPS cells
-
Polo JM, Anderssen E, Walsh RM, Schwarz BA, Nefzger CM, et al. (2012) A molecular roadmap of reprogramming somatic cells into iPS cells. Cell 151: 1617-1632.
-
(2012)
Cell
, vol.151
, pp. 1617-1632
-
-
Polo, J.M.1
Anderssen, E.2
Walsh, R.M.3
Schwarz, B.A.4
Nefzger, C.M.5
-
34
-
-
84866369892
-
Single-cell expression analyses during cellular reprogramming reveal an early stochastic and a late hierarchic phase
-
Buganim Y, Faddah DA, Cheng AW, Itskovich E, Markoulaki S, et al. (2012) Single-cell expression analyses during cellular reprogramming reveal an early stochastic and a late hierarchic phase. Cell 150: 1209-1222.
-
(2012)
Cell
, vol.150
, pp. 1209-1222
-
-
Buganim, Y.1
Faddah, D.A.2
Cheng, A.W.3
Itskovich, E.4
Markoulaki, S.5
-
35
-
-
84876568249
-
BTG2 loss and miR-21 upregulation contribute to prostate cell transformation by inducing luminal markers expression and epithelial-mesenchymal transition
-
Coppola V, Musumeci M, Patrizii M, Cannistraci A, Addario A, et al. (2012) BTG2 loss and miR-21 upregulation contribute to prostate cell transformation by inducing luminal markers expression and epithelial-mesenchymal transition. Oncogene.
-
(2012)
Oncogene
-
-
Coppola, V.1
Musumeci, M.2
Patrizii, M.3
Cannistraci, A.4
Addario, A.5
-
36
-
-
33645750279
-
hTERT-immortalized prostate epithelial and stromal-derived cells: an authentic in vitro model for differentiation and carcinogenesis
-
Kogan I, Goldfinger N, Milyavsky M, Cohen M, Shats I, et al. (2006) hTERT-immortalized prostate epithelial and stromal-derived cells: an authentic in vitro model for differentiation and carcinogenesis. Cancer Res 66: 3531-3540.
-
(2006)
Cancer Res
, vol.66
, pp. 3531-3540
-
-
Kogan, I.1
Goldfinger, N.2
Milyavsky, M.3
Cohen, M.4
Shats, I.5
-
37
-
-
34248566787
-
Comparison of nucleic acid targets prepared from total RNA or poly(A) RNA for DNA oligonucleotide microarray hybridization
-
Petersen K, Oyan AM, Rostad K, Olsen S, Bo TH, et al. (2007) Comparison of nucleic acid targets prepared from total RNA or poly(A) RNA for DNA oligonucleotide microarray hybridization. Anal Biochem 366: 46-58.
-
(2007)
Anal Biochem
, vol.366
, pp. 46-58
-
-
Petersen, K.1
Oyan, A.M.2
Rostad, K.3
Olsen, S.4
Bo, T.H.5
-
38
-
-
61849178049
-
Genome-wide profiling of histone h3 lysine 4 and lysine 27 trimethylation reveals an epigenetic signature in prostate carcinogenesis
-
Ke XS, Qu Y, Rostad K, Li WC, Lin B, et al. (2009) Genome-wide profiling of histone h3 lysine 4 and lysine 27 trimethylation reveals an epigenetic signature in prostate carcinogenesis. PLoS ONE 4: e4687.
-
(2009)
PLoS ONE
, vol.4
-
-
Ke, X.S.1
Qu, Y.2
Rostad, K.3
Li, W.C.4
Lin, B.5
-
39
-
-
0035021690
-
J-Express: exploring gene expression data using Java
-
Dysvik B, Jonassen I, (2001) J-Express: exploring gene expression data using Java. Bioinformatics 17: 369-370.
-
(2001)
Bioinformatics
, vol.17
, pp. 369-370
-
-
Dysvik, B.1
Jonassen, I.2
-
40
-
-
0036081355
-
Gene Expression Omnibus: NCBI gene expression and hybridization array data repository
-
Edgar R, Domrachev M, Lash AE, (2002) Gene Expression Omnibus: NCBI gene expression and hybridization array data repository. Nucleic Acids Res 30: 207-210.
-
(2002)
Nucleic Acids Res
, vol.30
, pp. 207-210
-
-
Edgar, R.1
Domrachev, M.2
Lash, A.E.3
|