-
1
-
-
0347444723
-
MicroRNAs: Genomics, biogenesis, mechanism, and function
-
Bartel DP,. MicroRNAs: genomics, biogenesis, mechanism, and function. Cell 2004; 116: 281-97.
-
(2004)
Cell
, vol.116
, pp. 281-297
-
-
Bartel, D.P.1
-
2
-
-
33645294070
-
Oncomirs - MicroRNAs with a role in cancer
-
Esquela-Kerscher A, Slack FJ,. Oncomirs-microRNAs with a role in cancer. Nat Rev Cancer 2006; 6: 259-69.
-
(2006)
Nat Rev Cancer
, vol.6
, pp. 259-269
-
-
Esquela-Kerscher, A.1
Slack, F.J.2
-
3
-
-
34548388833
-
Micro-RNA profiling in kidney and bladder cancers
-
Gottardo F, Liu CG, Ferracin M, Calin GA, Fassan M, Bassi P, Sevignani C, Byrne D, Negrini M, Pagano F, Gomella LG, Croce CM, et al. Micro-RNA profiling in kidney and bladder cancers. Urol Oncol 2007; 25: 387-92.
-
(2007)
Urol Oncol
, vol.25
, pp. 387-392
-
-
Gottardo, F.1
Liu, C.G.2
Ferracin, M.3
Calin, G.A.4
Fassan, M.5
Bassi, P.6
Sevignani, C.7
Byrne, D.8
Negrini, M.9
Pagano, F.10
Gomella, L.G.11
Croce, C.M.12
-
4
-
-
66349104794
-
Genomic profiling of microRNAs in bladder cancer: MiR-129 is associated with poor outcome and promotes cell death in vitro
-
Dyrskjot L, Ostenfeld MS, Bramsen JB, Silahtaroglu AN, Lamy P, Ramanathan R, Fristrup N, Jensen JL, Andersen CL, Zieger K, Kauppinen S, Ulhoi BP, et al. Genomic profiling of microRNAs in bladder cancer: miR-129 is associated with poor outcome and promotes cell death in vitro. Cancer Res 2009; 69: 4851-60.
-
(2009)
Cancer Res
, vol.69
, pp. 4851-4860
-
-
Dyrskjot, L.1
Ostenfeld, M.S.2
Bramsen, J.B.3
Silahtaroglu, A.N.4
Lamy, P.5
Ramanathan, R.6
Fristrup, N.7
Jensen, J.L.8
Andersen, C.L.9
Zieger, K.10
Kauppinen, S.11
Ulhoi, B.P.12
-
5
-
-
41649091906
-
The miR-200 family determines the epithelial phenotype of cancer cells by targeting the E-cadherin repressors ZEB1 and ZEB2
-
Park SM, Gaur AB, Lengyel E, Peter ME,. The miR-200 family determines the epithelial phenotype of cancer cells by targeting the E-cadherin repressors ZEB1 and ZEB2. Genes Dev 2008; 22: 894-907.
-
(2008)
Genes Dev
, vol.22
, pp. 894-907
-
-
Park, S.M.1
Gaur, A.B.2
Lengyel, E.3
Peter, M.E.4
-
6
-
-
47249091921
-
The miR-200 family inhibits epithelial-mesenchymal transition and cancer cell migration by direct targeting of E-cadherin transcriptional repressors ZEB1 and ZEB2
-
Korpal M, Lee ES, Hu G, Kang Y,. The miR-200 family inhibits epithelial-mesenchymal transition and cancer cell migration by direct targeting of E-cadherin transcriptional repressors ZEB1 and ZEB2. J Biol Chem 2008; 283: 14910-4.
-
(2008)
J Biol Chem
, vol.283
, pp. 14910-14914
-
-
Korpal, M.1
Lee, E.S.2
Hu, G.3
Kang, Y.4
-
7
-
-
43049103824
-
The miR-200 family and miR-205 regulate epithelial to mesenchymal transition by targeting ZEB1 and SIP1
-
Gregory PA, Bert AG, Paterson EL, Barry SC, Tsykin A, Farshid G, Vadas MA, Khew-Goodall Y, Goodall GJ,. The miR-200 family and miR-205 regulate epithelial to mesenchymal transition by targeting ZEB1 and SIP1. Nat Cell Biol 2008; 10: 593-601.
-
(2008)
Nat Cell Biol
, vol.10
, pp. 593-601
-
-
Gregory, P.A.1
Bert, A.G.2
Paterson, E.L.3
Barry, S.C.4
Tsykin, A.5
Farshid, G.6
Vadas, M.A.7
Khew-Goodall, Y.8
Goodall, G.J.9
-
8
-
-
44649163918
-
A reciprocal repression between ZEB1 and members of the miR-200 family promotes EMT and invasion in cancer cells
-
Burk U, Schubert J, Wellner U, Schmalhofer O, Vincan E, Spaderna S, Brabletz T,. A reciprocal repression between ZEB1 and members of the miR-200 family promotes EMT and invasion in cancer cells. EMBO Rep 2008; 9: 582-9.
-
(2008)
EMBO Rep
, vol.9
, pp. 582-589
-
-
Burk, U.1
Schubert, J.2
Wellner, U.3
Schmalhofer, O.4
Vincan, E.5
Spaderna, S.6
Brabletz, T.7
-
9
-
-
54049084380
-
A double-negative feedback loop between ZEB1-SIP1 and the microRNA-200 family regulates epithelial-mesenchymal transition
-
Bracken CP, Gregory PA, Kolesnikoff N, Bert AG, Wang J, Shannon MF, Goodall GJ,. A double-negative feedback loop between ZEB1-SIP1 and the microRNA-200 family regulates epithelial-mesenchymal transition. Cancer Res 2008; 68: 7846-54.
-
(2008)
Cancer Res
, vol.68
, pp. 7846-7854
-
-
Bracken, C.P.1
Gregory, P.A.2
Kolesnikoff, N.3
Bert, A.G.4
Wang, J.5
Shannon, M.F.6
Goodall, G.J.7
-
10
-
-
73049110243
-
The EMT-activator ZEB1 promotes tumorigenicity by repressing stemness-inhibiting microRNAs
-
Wellner U, Schubert J, Burk UC, Schmalhofer O, Zhu F, Sonntag A, Waldvogel B, Vannier C, Darling D, zur Hausen A, Brunton VG, Morton J, et al. The EMT-activator ZEB1 promotes tumorigenicity by repressing stemness-inhibiting microRNAs. Nat Cell Biol 2009; 11: 1487-95.
-
(2009)
Nat Cell Biol
, vol.11
, pp. 1487-1495
-
-
Wellner, U.1
Schubert, J.2
Burk, U.C.3
Schmalhofer, O.4
Zhu, F.5
Sonntag, A.6
Waldvogel, B.7
Vannier, C.8
Darling, D.9
Zur Hausen, A.10
Brunton, V.G.11
Morton, J.12
-
11
-
-
68049114782
-
Downregulation of miRNA-200c links breast cancer stem cells with normal stem cells
-
Shimono Y, Zabala M, Cho RW, Lobo N, Dalerba P, Qian D, Diehn M, Liu H, Panula SP, Chiao E, Dirbas FM, Somlo G, et al. Downregulation of miRNA-200c links breast cancer stem cells with normal stem cells. Cell 2009; 138: 592-603.
-
(2009)
Cell
, vol.138
, pp. 592-603
-
-
Shimono, Y.1
Zabala, M.2
Cho, R.W.3
Lobo, N.4
Dalerba, P.5
Qian, D.6
Diehn, M.7
Liu, H.8
Panula, S.P.9
Chiao, E.10
Dirbas, F.M.11
Somlo, G.12
-
13
-
-
33847763576
-
Genetic unmasking of an epigenetically silenced microRNA in human cancer cells
-
Lujambio A, Ropero S, Ballestar E, Fraga MF, Cerrato C, Setien F, Casado S, Suarez-Gauthier A, Sanchez-Cespedes M, Git A, Spiteri I, Das PP, et al. Genetic unmasking of an epigenetically silenced microRNA in human cancer cells. Cancer Res 2007; 67: 1424-9.
-
(2007)
Cancer Res
, vol.67
, pp. 1424-1429
-
-
Lujambio, A.1
Ropero, S.2
Ballestar, E.3
Fraga, M.F.4
Cerrato, C.5
Setien, F.6
Casado, S.7
Suarez-Gauthier, A.8
Sanchez-Cespedes, M.9
Git, A.10
Spiteri, I.11
Das, P.P.12
-
14
-
-
34248217444
-
Methylation of human microRNA genes in normal and neoplastic cells
-
Weber B, Stresemann C, Brueckner B, Lyko F,. Methylation of human microRNA genes in normal and neoplastic cells. Cell Cycle 2007; 6: 1001-5.
-
(2007)
Cell Cycle
, vol.6
, pp. 1001-1005
-
-
Weber, B.1
Stresemann, C.2
Brueckner, B.3
Lyko, F.4
-
15
-
-
20344387231
-
A molecular signature in superficial bladder carcinoma predicts clinical outcome
-
Dyrskjot L, Zieger K, Kruhoffer M, Thykjaer T, Jensen JL, Primdahl H, Aziz N, Marcussen N, Moller K, Orntoft TF,. A molecular signature in superficial bladder carcinoma predicts clinical outcome. Clin Cancer Res 2005; 11: 4029-36.
-
(2005)
Clin Cancer Res
, vol.11
, pp. 4029-4036
-
-
Dyrskjot, L.1
Zieger, K.2
Kruhoffer, M.3
Thykjaer, T.4
Jensen, J.L.5
Primdahl, H.6
Aziz, N.7
Marcussen, N.8
Moller, K.9
Orntoft, T.F.10
-
16
-
-
51049119231
-
Diagnostic and prognostic microRNAs in stage II colon cancer
-
Schepeler T, Reinert JT, Ostenfeld MS, Christensen LL, Silahtaroglu AN, Dyrskjot L, Wiuf C, Sorensen FJ, Kruhoffer M, Laurberg S, Kauppinen S, Orntoft TF, et al. Diagnostic and prognostic microRNAs in stage II colon cancer. Cancer Res 2008; 68: 6416-24.
-
(2008)
Cancer Res
, vol.68
, pp. 6416-6424
-
-
Schepeler, T.1
Reinert, J.T.2
Ostenfeld, M.S.3
Christensen, L.L.4
Silahtaroglu, A.N.5
Dyrskjot, L.6
Wiuf, C.7
Sorensen, F.J.8
Kruhoffer, M.9
Laurberg, S.10
Kauppinen, S.11
Orntoft, T.F.12
-
17
-
-
0031822837
-
Tissue microarrays for high-throughput molecular profiling of tumor specimens
-
Kononen J, Bubendorf L, Kallioniemi A, Barlund M, Schraml P, Leighton S, Torhorst J, Mihatsch MJ, Sauter G, Kallioniemi OP,. Tissue microarrays for high-throughput molecular profiling of tumor specimens. Nat Med 1998; 4: 844-7.
-
(1998)
Nat Med
, vol.4
, pp. 844-847
-
-
Kononen, J.1
Bubendorf, L.2
Kallioniemi, A.3
Barlund, M.4
Schraml, P.5
Leighton, S.6
Torhorst, J.7
Mihatsch, M.J.8
Sauter, G.9
Kallioniemi, O.P.10
-
18
-
-
0034201441
-
EMBOSS: The European Molecular Biology Open Software Suite
-
Rice P, Longden I, Bleasby A,. EMBOSS: the European Molecular Biology Open Software Suite. Trends Genet 2000; 16: 276-7.
-
(2000)
Trends Genet
, vol.16
, pp. 276-277
-
-
Rice, P.1
Longden, I.2
Bleasby, A.3
-
19
-
-
34547528183
-
DNA methylation: Bisulphite modification and analysis
-
Clark SJ, Statham A, Stirzaker C, Molloy PL, Frommer M,. DNA methylation: bisulphite modification and analysis. Nat Protoc 2006; 1: 2353-64.
-
(2006)
Nat Protoc
, vol.1
, pp. 2353-2364
-
-
Clark, S.J.1
Statham, A.2
Stirzaker, C.3
Molloy, P.L.4
Frommer, M.5
-
20
-
-
35648937679
-
Genomic profiling of CpG methylation and allelic specificity using quantitative high-throughput mass spectrometry: Critical evaluation and improvements
-
Coolen MW, Statham AL, Gardiner-Garden M, Clark SJ,. Genomic profiling of CpG methylation and allelic specificity using quantitative high-throughput mass spectrometry: critical evaluation and improvements. Nucleic Acids Res 2007; 35: e119.
-
(2007)
Nucleic Acids Res
, vol.35
-
-
Coolen, M.W.1
Statham, A.L.2
Gardiner-Garden, M.3
Clark, S.J.4
-
21
-
-
0028096611
-
High sensitivity mapping of methylated cytosines
-
Clark SJ, Harrison J, Paul CL, Frommer M,. High sensitivity mapping of methylated cytosines. Nucleic Acids Res 1994; 22: 2990-7.
-
(1994)
Nucleic Acids Res
, vol.22
, pp. 2990-2997
-
-
Clark, S.J.1
Harrison, J.2
Paul, C.L.3
Frommer, M.4
-
22
-
-
37549060948
-
Concordant epigenetic silencing of transforming growth factor-beta signaling pathway genes occurs early in breast carcinogenesis
-
Hinshelwood RA, Huschtscha LI, Melki J, Stirzaker C, Abdipranoto A, Vissel B, Ravasi T, Wells CA, Hume DA, Reddel RR, Clark SJ,. Concordant epigenetic silencing of transforming growth factor-beta signaling pathway genes occurs early in breast carcinogenesis. Cancer Res 2007; 67: 11517-27.
-
(2007)
Cancer Res
, vol.67
, pp. 11517-11527
-
-
Hinshelwood, R.A.1
Huschtscha, L.I.2
Melki, J.3
Stirzaker, C.4
Abdipranoto, A.5
Vissel, B.6
Ravasi, T.7
Wells, C.A.8
Hume, D.A.9
Reddel, R.R.10
Clark, S.J.11
-
23
-
-
27944474390
-
Gene expression profiling of noninvasive primary urothelial tumours using microarrays
-
Aaboe M, Marcussen N, Jensen KM, Thykjaer T, Dyrskjot L, Orntoft TF,. Gene expression profiling of noninvasive primary urothelial tumours using microarrays. Br J Cancer 2005; 93: 1182-90.
-
(2005)
Br J Cancer
, vol.93
, pp. 1182-1190
-
-
Aaboe, M.1
Marcussen, N.2
Jensen, K.M.3
Thykjaer, T.4
Dyrskjot, L.5
Orntoft, T.F.6
-
24
-
-
2542610720
-
Preprocessing of oligonucleotide array data
-
author reply 8
-
Wu Z, Irizarry RA,. Preprocessing of oligonucleotide array data. Nat Biotechnol 2004; 22: 656-8; author reply 8.
-
(2004)
Nat Biotechnol
, vol.22
, pp. 656-658
-
-
Wu, Z.1
Irizarry, R.A.2
-
25
-
-
67650561891
-
Stable expression of miR-200c alone is sufficient to regulate TCF8 (ZEB1) and restore E-cadherin expression
-
Hurteau GJ, Carlson JA, Roos E, Brock GJ,. Stable expression of miR-200c alone is sufficient to regulate TCF8 (ZEB1) and restore E-cadherin expression. Cell Cycle 2009; 8: 2064-9.
-
(2009)
Cell Cycle
, vol.8
, pp. 2064-2069
-
-
Hurteau, G.J.1
Carlson, J.A.2
Roos, E.3
Brock, G.J.4
-
26
-
-
0028971143
-
MatInd and MatInspector: New fast and versatile tools for detection of consensus matches in nucleotide sequence data
-
Quandt K, Frech K, Karas H, Wingender E, Werner T,. MatInd and MatInspector: new fast and versatile tools for detection of consensus matches in nucleotide sequence data. Nucleic Acids Res 1995; 23: 4878-84.
-
(1995)
Nucleic Acids Res
, vol.23
, pp. 4878-4884
-
-
Quandt, K.1
Frech, K.2
Karas, H.3
Wingender, E.4
Werner, T.5
-
27
-
-
38349023012
-
Twist is a transcriptional repressor of E-cadherin gene expression in breast cancer
-
Vesuna F, van Diest P, Chen JH, Raman V,. Twist is a transcriptional repressor of E-cadherin gene expression in breast cancer. Biochem Biophys Res Commun 2008; 367: 235-41.
-
(2008)
Biochem Biophys Res Commun
, vol.367
, pp. 235-241
-
-
Vesuna, F.1
Van Diest, P.2
Chen, J.H.3
Raman, V.4
-
28
-
-
20144388095
-
DeltaEF1 is a transcriptional repressor of E-cadherin and regulates epithelial plasticity in breast cancer cells
-
Eger A, Aigner K, Sonderegger S, Dampier B, Oehler S, Schreiber M, Berx G, Cano A, Beug H, Foisner R,. DeltaEF1 is a transcriptional repressor of E-cadherin and regulates epithelial plasticity in breast cancer cells. Oncogene 2005; 24: 2375-85.
-
(2005)
Oncogene
, vol.24
, pp. 2375-2385
-
-
Eger, A.1
Aigner, K.2
Sonderegger, S.3
Dampier, B.4
Oehler, S.5
Schreiber, M.6
Berx, G.7
Cano, A.8
Beug, H.9
Foisner, R.10
-
29
-
-
77649271805
-
Consolidation of the cancer genome into domains of repressive chromatin by long-range epigenetic silencing (LRES) reduces transcriptional plasticity
-
Coolen MW, Stirzaker C, Song JZ, Statham AL, Kassir Z, Moreno CS, Young AN, Varma V, Speed TP, Cowley M, Lacaze P, Kaplan W, et al. Consolidation of the cancer genome into domains of repressive chromatin by long-range epigenetic silencing (LRES) reduces transcriptional plasticity. Nat Cell Biol 2010; 12: 235-46.
-
(2010)
Nat Cell Biol
, vol.12
, pp. 235-246
-
-
Coolen, M.W.1
Stirzaker, C.2
Song, J.Z.3
Statham, A.L.4
Kassir, Z.5
Moreno, C.S.6
Young, A.N.7
Varma, V.8
Speed, T.P.9
Cowley, M.10
Lacaze, P.11
Kaplan, W.12
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