Two Antagonistic Clock-Regulated Histidine Kinases Time the Activation of Circadian Gene Expression

Molecular Cell

Volumn 50, Issue 2, 2013, Pages 288-294

  Gutu, Andrian ^a   O'Shea, Erin K ^a  

^a HARVARD UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

KAIA PROTEIN; KAIB PROTEIN; KAIC PROTEIN; PROTEIN; PROTEIN HISTIDINE KINASE; UNCLASSIFIED DRUG;

ARTICLE; AUTOPHOSPHORYLATION; BIOLUMINESCENCE; CELL ELONGATION; CIRCADIAN RHYTHM; CONTROLLED STUDY; CYANOBACTERIUM; GENE EXPRESSION; IN VITRO STUDY; IN VIVO STUDY; NONHUMAN; OSCILLATION; PHENOTYPE; PROTEIN DEPHOSPHORYLATION; PROTEIN PHOSPHORYLATION; THERMOSYNECHOCOCCUS ELONGATUS;

BACTERIAL PROTEINS; CIRCADIAN CLOCKS; CIRCADIAN RHYTHM; GENE EXPRESSION REGULATION, BACTERIAL; PHOSPHORYLATION; PHOSPHOTRANSFERASES; PROTEIN KINASES; PROTEIN PROCESSING, POST-TRANSLATIONAL; SYNECHOCOCCUS;

CYANOBACTERIA; KAIA; SASA;

EID: 84876820077     PISSN: 10972765     EISSN: 10974164     Source Type: Journal    
DOI: 10.1016/j.molcel.2013.02.022     Document Type: Article

References (31)

1. Bell-Pedersen D., Cassone V.M., Earnest D.J., Golden S.S., Hardin P.E., Thomas T.L., Zoran M.J. Circadian rhythms from multiple oscillators: lessons from diverse organisms. Nat. Rev. Genet. 2005, 6:544-556.
2. Casino P., Rubio V., Marina A. The mechanism of signal transduction by two-component systems. Curr. Opin. Struct. Biol. 2010, 20:763-771.
3. Dong G., Yang Q., Wang Q., Kim Y.I., Wood T.L., Osteryoung K.W., van Oudenaarden A., Golden S.S. Elevated ATPase activity of KaiC applies a circadian checkpoint on cell division in Synechococcus elongatus. Cell 2010, 140:529-539.
4. Dunlap J.C., Loros J.J., DeCoursey P.J. Chronobiology: Biological Timekeeping 2004, Sinauer, Sunderland, MA.
5. Gao R., Stock A.M. Biological insights from structures of two-component proteins. Annu. Rev. Microbiol. 2009, 63:133-154.
6. Ishiura M., Kutsuna S., Aoki S., Iwasaki H., Andersson C.R., Tanabe A., Golden S.S., Johnson C.H., Kondo T. Expression of a gene cluster kaiABC as a circadian feedback process in cyanobacteria. Science 1998, 281:1519-1523.
7. Ito H., Mutsuda M., Murayama Y., Tomita J., Hosokawa N., Terauchi K., Sugita C., Sugita M., Kondo T., Iwasaki H. Cyanobacterial daily life with Kai-based circadian and diurnal genome-wide transcriptional control in Synechococcus elongatus. Proc. Natl. Acad. Sci. USA 2009, 106:14168-14173.
8. Ivleva N.B., Gao T., LiWang A.C., Golden S.S. Quinone sensing by the circadian input kinase of the cyanobacterial circadian clock. Proc. Natl. Acad. Sci. USA 2006, 103:17468-17473.
9. Iwasaki H., Williams S.B., Kitayama Y., Ishiura M., Golden S.S., Kondo T. A KaiC-interacting sensory histidine kinase, SasA, necessary to sustain robust circadian oscillation in cyanobacteria. Cell 2000, 101:223-233.
10. Kageyama H., Nishiwaki T., Nakajima M., Iwasaki H., Oyama T., Kondo T. Cyanobacterial circadian pacemaker: Kai protein complex dynamics in the KaiC phosphorylation cycle in vitro. Mol. Cell 2006, 23:161-171.
11. Laub M.T., Goulian M. Specificity in two-component signal transduction pathways. Annu. Rev. Genet. 2007, 41:121-145.
12. Liu Y., Tsinoremas N.F., Johnson C.H., Lebedeva N.V., Golden S.S., Ishiura M., Kondo T. Circadian orchestration of gene expression in cyanobacteria. Genes Dev. 1995, 9:1469-1478.
13. Mori T., Binder B., Johnson C.H. Circadian gating of cell division in cyanobacteria growing with average doubling times of less than 24 hours. Proc. Natl. Acad. Sci. USA 1996, 93:10183-10188.
14. Murayama Y., Oyama T., Kondo T. Regulation of circadian clock gene expression by phosphorylation states of KaiC in cyanobacteria. J. Bacteriol. 2008, 190:1691-1698.
15. Nishiwaki T., Satomi Y., Kitayama Y., Terauchi K., Kiyohara R., Takao T., Kondo T. A sequential program of dual phosphorylation of KaiC as a basis for circadian rhythm in cyanobacteria. EMBO J. 2007, 26:4029-4037.
16. Qin X., Byrne M., Mori T., Zou P., Williams D.R., McHaourab H., Johnson C.H. Intermolecular associations determine the dynamics of the circadian KaiABC oscillator. Proc. Natl. Acad. Sci. USA 2010, 107:14805-14810.
17. Rosbash M. The implications of multiple circadian clock origins. PLoS Biol. 2009, 7:e62. 10.1371/journal.pbio.1000062.
18. Russo F.D., Silhavy T.J. EnvZ controls the concentration of phosphorylated OmpR to mediate osmoregulation of the porin genes. J. Mol. Biol. 1991, 222:567-580.
19. Rust M.J., Markson J.S., Lane W.S., Fisher D.S., O'Shea E.K. Ordered phosphorylation governs oscillation of a three-protein circadian clock. Science 2007, 318:809-812.
20. Rust M.J., Golden S.S., O'Shea E.K. Light-driven changes in energy metabolism directly entrain the cyanobacterial circadian oscillator. Science 2011, 331:220-223.
21. Schmitz O., Katayama M., Williams S.B., Kondo T., Golden S.S. CikA, a bacteriophytochrome that resets the cyanobacterial circadian clock. Science 2000, 289:765-768.
22. Skerker J.M., Prasol M.S., Perchuk B.S., Biondi E.G., Laub M.T. Two-component signal transduction pathways regulating growth and cell cycle progression in a bacterium: a system-level analysis. PLoS Biol. 2005, 3:e334. 10.1371/journal.pbio.0030334.
23. Smith R.M., Williams S.B. Circadian rhythms in gene transcription imparted by chromosome compaction in the cyanobacterium Synechococcus elongatus. Proc. Natl. Acad. Sci. USA 2006, 103:8564-8569.
24. Stal L., Krumbein W. Temporal separation of nitrogen fixation and photosynthesis in the filamentous, non-heterocystous cyanobacterium Oscillatoria sp. Arch. Microbiol. 1987, 149:76-80.
25. Takai N., Nakajima M., Oyama T., Kito R., Sugita C., Sugita M., Kondo T., Iwasaki H. A KaiC-associating SasA-RpaA two-component regulatory system as a major circadian timing mediator in cyanobacteria. Proc. Natl. Acad. Sci. USA 2006, 103:12109-12114.
26. Taniguchi Y., Katayama M., Ito R., Takai N., Kondo T., Oyama T. labA: a novel gene required for negative feedback regulation of the cyanobacterial circadian clock protein KaiC. Genes Dev. 2007, 21:60-70.
27. Taniguchi Y., Takai N., Katayama M., Kondo T., Oyama T. Three major output pathways from the KaiABC-based oscillator cooperate to generate robust circadian kaiBC expression in cyanobacteria. Proc. Natl. Acad. Sci. USA 2010, 107:3263-3268.
28. Tomita J., Nakajima M., Kondo T., Iwasaki H. No transcription-translation feedback in circadian rhythm of KaiC phosphorylation. Science 2005, 307:251-254.
29. Valencia S.J., Bitou K., Ishii K., Murakami R., Morishita M., Onai K., Furukawa Y., Imada K., Namba K., Ishiura M. Phase-dependent generation and transmission of time information by the KaiABC circadian clock oscillator through SasA-KaiC interaction in cyanobacteria. Genes Cells 2012, 17:398-419.
30. Vijayan V., Zuzow R., O'Shea E.K. Oscillations in supercoiling drive circadian gene expression in cyanobacteria. Proc. Natl. Acad. Sci. USA 2009, 106:22564-22568.
31. Zhang X., Dong G., Golden S.S. The pseudo-receiver domain of CikA regulates the cyanobacterial circadian input pathway. Mol. Microbiol. 2006, 60:658-668.