-
2
-
-
0029042379
-
Circadian orchestration of gene expression in cyanobacteria
-
Liu Y, et al. (1995) Circadian orchestration of gene expression in cyanobacteria. Genes Dev 9:1469-1478.
-
(1995)
Genes Dev
, vol.9
, pp. 1469-1478
-
-
Liu, Y.1
-
3
-
-
69549101750
-
Cyanobacterial daily life with Kai-based circadian and diurnal genome-wide transcriptional control in Synechococcus elongatus
-
Ito H, et al. (2009) Cyanobacterial daily life with Kai-based circadian and diurnal genome-wide transcriptional control in Synechococcus elongatus. Proc Natl Acad Sci USA 106:14168-14173.
-
(2009)
Proc Natl Acad Sci USA
, vol.106
, pp. 14168-14173
-
-
Ito, H.1
-
4
-
-
0037180442
-
KaiA-stimulated KaiC phosphorylation in circadian timing loops in cyanobacteria
-
Iwasaki H, Nishiwaki T, Kitayama Y, NakajimaM, Kondo T (2002) KaiA-stimulated KaiC phosphorylation in circadian timing loops in cyanobacteria. Proc Natl Acad Sci USA 99:15788-15793.
-
(2002)
Proc Natl Acad Sci USA
, vol.99
, pp. 15788-15793
-
-
Iwasaki, H.1
Nishiwaki, T.2
Kitayama, Y.3
Nakajima, M.4
Kondo, T.5
-
5
-
-
17244373578
-
Reconstitution of circadian oscillation of cyanobacterial KaiC phosphorylation in vitro
-
Nakajima M, et al. (2005) Reconstitution of circadian oscillation of cyanobacterial KaiC phosphorylation in vitro. Science 308:414-415.
-
(2005)
Science
, vol.308
, pp. 414-415
-
-
Nakajima, M.1
-
6
-
-
0032483510
-
Expression of a gene cluster KaiABC as a circadian feedback process in cyanobacteria
-
Ishiura M, et al. (1998) Expression of a gene cluster KaiABC as a circadian feedback process in cyanobacteria. Science 281:1519-1523.
-
(1998)
Science
, vol.281
, pp. 1519-1523
-
-
Ishiura, M.1
-
7
-
-
12244296161
-
No transcription- translation feedback in circadian rhythm of KaiC phosphorylation
-
IshiuraM
-
Tomita J, Nakajima M, Kondo T, IshiuraM(2005) No transcription- translation feedback in circadian rhythm of KaiC phosphorylation. Science 307:251-254.
-
(2005)
Science
, vol.307
, pp. 251-254
-
-
Tomita, J.1
Nakajima, M.2
Kondo, T.3
-
8
-
-
1642285223
-
Phase determination of circadian gene expression in Synechococcus elongatus PCC 7942
-
Min H, Liu Y, Johnson CH, Golden SS (2004) Phase determination of circadian gene expression in Synechococcus elongatus PCC 7942. J Biol Rhythms 19:103-112.
-
(2004)
J Biol Rhythms
, vol.19
, pp. 103-112
-
-
Min, H.1
Liu, Y.2
Johnson, C.H.3
Golden, S.S.4
-
9
-
-
0030005494
-
Circadian expression of genes involved in the purine biosynthetic pathway of the cyanobacterium Synechococcus sp. strain PCC 7942
-
Liu Y, Tsinoremas NF, Golden SS, Kondo T, Johnson CH (1996) Circadian expression of genes involved in the purine biosynthetic pathway of the cyanobacterium Synechococcus sp. strain PCC 7942. Mol Microbiol 20:1071-1081.
-
(1996)
Mol Microbiol
, vol.20
, pp. 1071-1081
-
-
Liu, Y.1
Tsinoremas, N.F.2
Golden, S.S.3
Kondo, T.4
Johnson, C.H.5
-
10
-
-
0033758822
-
Anew circadian class 2 gene opcA,whose product is important for reductant production at night in Synechococcus elongatus PCC 7942
-
Min H, Golden SS (2000)Anew circadian class 2 gene opcA,whose product is important for reductant production at night in Synechococcus elongatus PCC 7942. J Bacteriol 182:6214-6221.
-
(2000)
J Bacteriol
, vol.182
, pp. 6214-6221
-
-
Min, H.1
Golden, S.S.2
-
12
-
-
0035783051
-
Circadian programming in cyanobacteria
-
Mori T, Johnson CH (2001) Circadian programming in cyanobacteria. Semin Cell Dev Biol 12:271-278.
-
(2001)
Semin Cell Dev Biol
, vol.12
, pp. 271-278
-
-
Mori, T.1
Johnson, C.H.2
-
13
-
-
33744779947
-
Circadian rhythms in gene transcription imparted by chromosome compaction in the cyanobacterium Synechococcus elongatus
-
Smith SM, Williams SB (2006) Circadian rhythms in gene transcription imparted by chromosome compaction in the cyanobacterium Synechococcus elongatus. Proc Natl Acad Sci USA 103:8564-8569.
-
(2006)
Proc Natl Acad Sci USA
, vol.103
, pp. 8564-8569
-
-
Smith, S.M.1
Williams, S.B.2
-
14
-
-
36749033238
-
Circadian rhythms of superhelical status of DNA in cyanobacteria
-
Woelfle MA, Xu Y, Qin X, Johnson CH (2007) Circadian rhythms of superhelical status of DNA in cyanobacteria. Proc Natl Acad Sci USA 104:18819-18824.
-
(2007)
Proc Natl Acad Sci USA
, vol.104
, pp. 18819-18824
-
-
Woelfle, M.A.1
Xu, Y.2
Qin, X.3
Johnson, C.H.4
-
15
-
-
0027190489
-
Circadian rhythms in prokaryotes: Luciferase as a reporter of circadian gene expression in cyanobacteria
-
Kondo T, et al. (1993) Circadian rhythms in prokaryotes: Luciferase as a reporter of circadian gene expression in cyanobacteria. Proc Natl Acad Sci USA 90:5672-5676.
-
(1993)
Proc Natl Acad Sci USA
, vol.90
, pp. 5672-5676
-
-
Kondo, T.1
-
16
-
-
0028918572
-
Bacterial luciferase as a reporter of circadian gene expression in cyanobacteria
-
Liu Y, Golden SS, Kondo T, Ishiura M, Johnson CH (1995) Bacterial luciferase as a reporter of circadian gene expression in cyanobacteria. J Bacteriol 177:2080-2086.
-
(1995)
J Bacteriol
, vol.177
, pp. 2080-2086
-
-
Liu, Y.1
Golden, S.S.2
Kondo, T.3
Ishiura, M.4
Johnson, C.H.5
-
18
-
-
11344266685
-
Genomic transcriptional response to loss of chromosomal supercoiling in Escherichia coli
-
Peter BJ, et al. (2004) Genomic transcriptional response to loss of chromosomal supercoiling in Escherichia coli. Genome Biol 5:R87.
-
(2004)
Genome Biol
, vol.5
-
-
Peter, B.J.1
-
19
-
-
33749419280
-
Analysis of pleiotropic transcriptional profiles: A case study of DNA gyrase inhibition
-
Jeong KS, Xie Y, Hiasa H, Khodursky AB (2006) Analysis of pleiotropic transcriptional profiles: A case study of DNA gyrase inhibition. PLoS Genet 2:1464-1476.
-
(2006)
PLoS Genet
, vol.2
, pp. 1464-1476
-
-
Jeong, K.S.1
Xie, Y.2
Hiasa, H.3
Khodursky, A.B.4
-
20
-
-
0020554566
-
Regulation of the genes for E. coliDNAgyrase: Homeostatic control of DNA supercoiling
-
GellertM
-
Menzel R, GellertM(1983) Regulation of the genes for E. coliDNAgyrase: Homeostatic control of DNA supercoiling. Cell 35:105-113.
-
(1983)
Cell
, vol.35
, pp. 105-113
-
-
Menzel, R.1
-
21
-
-
0033975419
-
The bacterial replicative helicase DnaB evolved from a RecA duplication
-
Leipe DD, Aravind L, Grishin NV, Koonin EV (2000) The bacterial replicative helicase DnaB evolved from a RecA duplication. Genome Res 10:5-16.
-
(2000)
Genome Res
, vol.10
, pp. 5-16
-
-
Leipe, D.D.1
Aravind, L.2
Grishin, N.V.3
Koonin, E.V.4
-
22
-
-
0037168601
-
Circadian clock protein KaiC forms ATP-dependent hexameric rings and binds DNA
-
Mori T, et al. (2002) Circadian clock protein KaiC forms ATP-dependent hexameric rings and binds DNA. Proc Natl Acad Sci USA 99:17203-17208.
-
(2002)
Proc Natl Acad Sci USA
, vol.99
, pp. 17203-17208
-
-
Mori, T.1
-
23
-
-
0025915548
-
Bacterial DNA supercoiling and [ATP]/[ADP] ratio: Changes associated with salt shock
-
Hseih LS, Rouviere-Yaniv J, Drlica K (1991) Bacterial DNA supercoiling and [ATP]/[ADP] ratio: Changes associated with salt shock. J Bacteriol 12:3914-3917.
-
(1991)
J Bacteriol
, vol.12
, pp. 3914-3917
-
-
Hseih, L.S.1
Rouviere-Yaniv, J.2
Drlica, K.3
-
24
-
-
0025777765
-
Bacterial DNA supercoiling and [ATP]/[ADP]. Changes associated with a transition to anaerobic growth
-
Hseih LS, Burger RM, Drlica K (1991) Bacterial DNA supercoiling and [ATP]/[ADP]. Changes associated with a transition to anaerobic growth. J Mol Bio 219:443-450.
-
(1991)
J Mol Bio
, vol.219
, pp. 443-450
-
-
Hseih, L.S.1
Burger, R.M.2
Drlica, K.3
-
25
-
-
0029039417
-
Topoisomerase activity during the heat shock response in Escherichia coli K-12
-
Camacho-Carranza R, et al. (1995) Topoisomerase activity during the heat shock response in Escherichia coli K-12. J Bacteriol 177:3619-3622.
-
(1995)
J Bacteriol
, vol.177
, pp. 3619-3622
-
-
Camacho-Carranza, R.1
-
27
-
-
0028298256
-
Promoters responsive to DNA bending: A common theme in prokaryotic gene expression
-
Perez-Martin J, Rojo F, Lorenzo V (1994) Promoters responsive to DNA bending: A common theme in prokaryotic gene expression. Microbiol Rev 58:268-290.
-
(1994)
Microbiol Rev
, vol.58
, pp. 268-290
-
-
Perez-Martin, J.1
Rojo, F.2
Lorenzo, V.3
-
28
-
-
0242308518
-
Topoisomerase function during bacterial responses to environmental challenge
-
Rui S, Tse-Dinh YC (2003) Topoisomerase function during bacterial responses to environmental challenge. Front Biosci 8:256-263.
-
(2003)
Front Biosci
, vol.8
, pp. 256-263
-
-
Rui, S.1
Tse-Dinh, Y.C.2
-
29
-
-
0037316190
-
A microarray-based antibiotic screen identifies a regulatory role for supercoiling in the osmotic stress response of Escherichia coli
-
Cheung KJ, Badarinarayana V, Selinger DW, Janse D, Church GM (2003) A microarray-based antibiotic screen identifies a regulatory role for supercoiling in the osmotic stress response of Escherichia coli. Genome Res 13:206-215.
-
(2003)
Genome Res
, vol.13
, pp. 206-215
-
-
Cheung, K.J.1
Badarinarayana, V.2
Selinger, D.W.3
Janse, D.4
Church, G.M.5
-
30
-
-
0023833060
-
A physiological role for DNA supercoiling in the osmotic regulation of gene expression in S. typhimurium and E. coli
-
Higgins CF, et al. (1988) A physiological role for DNA supercoiling in the osmotic regulation of gene expression in S. typhimurium and E. coli. Cell 52:569-584.
-
(1988)
Cell
, vol.52
, pp. 569-584
-
-
Higgins, C.F.1
-
31
-
-
0026657831
-
Structural analysis of the acfA and acfD genes of Vibrio cholerae: Effects of DNA topology and transcriptional activators on expression
-
Parsot C, Mekalanos JJ (1992) Structural analysis of the acfA and acfD genes of Vibrio cholerae: Effects of DNA topology and transcriptional activators on expression. J Bacteriol 174:5211-5218.
-
(1992)
J Bacteriol
, vol.174
, pp. 5211-5218
-
-
Parsot, C.1
Mekalanos, J.J.2
-
32
-
-
0030657007
-
DNA supercoiling and osmoresistance in Bacillus subtilis 168
-
Alice AF, Sanchez-Rivas C (1997) DNA supercoiling and osmoresistance in Bacillus subtilis 168. Curr Microbiol 35:309-315.
-
(1997)
Curr Microbiol
, vol.35
, pp. 309-315
-
-
Alice, A.F.1
Sanchez-Rivas, C.2
-
33
-
-
72949089920
-
DNA supercoiling regulates the stress-inducible expression of genes in the cyanobacterium
-
September 10, Epub ahead of print
-
Prakash JS, et al. (September 10, 2009) DNA supercoiling regulates the stress-inducible expression of genes in the cyanobacterium Synechocystis. Mol BioSyst [Epub ahead of print].
-
(2009)
Synechocystis. Mol BioSyst
-
-
Prakash, J.S.1
-
34
-
-
0033945328
-
Application of bioluminescence to the study of circadian rhythms in cyanobacteria
-
Andersson CR, et al. (2000) Application of bioluminescence to the study of circadian rhythms in cyanobacteria. Methods Enzymol 305:527-542.
-
(2000)
Methods Enzymol
, vol.305
, pp. 527-542
-
-
Andersson, C.R.1
-
35
-
-
0025721112
-
Expression of the psbDII fene in Synechococcus sp. strain PCC 7942 requires sequences downstream of the transcription start site
-
Bustos SA, Golden SS (1991) Expression of the psbDII fene in Synechococcus sp. strain PCC 7942 requires sequences downstream of the transcription start site. J Bacteriol 173:7525-7533.
-
(1991)
J Bacteriol
, vol.173
, pp. 7525-7533
-
-
Bustos, S.A.1
Golden, S.S.2
-
36
-
-
14644422162
-
Global analysis of circadian gene expression in the cyanobacterium Synechocystis sp. strain PCC 6803
-
Kucho K, et al. (2005) Global analysis of circadian gene expression in the cyanobacterium Synechocystis sp. strain PCC 6803. J Bacteriol 187:2190-2199.
-
(2005)
J Bacteriol
, vol.187
, pp. 2190-2199
-
-
Kucho, K.1
-
37
-
-
0004136246
-
-
RussellDW, Cold Spring Harbor Lab Press, Cold Spring Harbor, NY, 3rd Ed
-
Sambrook J, RussellDW(2001) Molecular Cloning - A Laboratory Manual (Cold Spring Harbor Lab Press, Cold Spring Harbor, NY), 3rd Ed.
-
(2001)
Molecular Cloning - A Laboratory Manual
-
-
Sambrook, J.1
|