메뉴 건너뛰기




Volumn 3, Issue 3, 2013, Pages 655-666

Cis-regulatory sequence variation and association with Mycoplasma load in natural populations of the house finch (Carpodacus mexicanus)

Author keywords

Association mapping; Cis regulatory element; Expression; House finch; Mycoplasma gallisepticum

Indexed keywords


EID: 84876571433     PISSN: None     EISSN: 20457758     Source Type: Journal    
DOI: 10.1002/ece3.484     Document Type: Article
Times cited : (10)

References (78)
  • 2
    • 1842506110 scopus 로고    scopus 로고
    • Successful amplification of extremely GC-rich promoter regions using a novel 'slowdown PCR' technique
    • Bachmann, H. S., W. Siffert and U. H. Frey 2003. Successful amplification of extremely GC-rich promoter regions using a novel 'slowdown PCR' technique. Pharmacogenetics 13:759-766.
    • (2003) Pharmacogenetics , vol.13 , pp. 759-766
    • Bachmann, H.S.1    Siffert, W.2    Frey, U.H.3
  • 3
    • 38849083895 scopus 로고    scopus 로고
    • Genomics of natural bird populations: a gene-based set of reference markers evenly spread across the avian genome
    • Backström, N., S. Fagerberg and H. Ellegren 2008. Genomics of natural bird populations: a gene-based set of reference markers evenly spread across the avian genome. Mol. Ecol. 17:964-980.
    • (2008) Mol. Ecol. , vol.17 , pp. 964-980
    • Backström, N.1    Fagerberg, S.2    Ellegren, H.3
  • 4
    • 84886272703 scopus 로고    scopus 로고
    • Comparative genomics in birds: evidence for adaptive evolution in passerines from a house finch (Carpodacus mexicanus) transcriptome
    • Backström, N., Q. Zhang, and S. V. Edwards 2012. Comparative genomics in birds: evidence for adaptive evolution in passerines from a house finch (Carpodacus mexicanus) transcriptome. In Review.
    • (2012)
    • Backström, N.1    Zhang, Q.2    Edwards, S.V.3
  • 5
    • 62449120610 scopus 로고    scopus 로고
    • Nucleotide variation, linkage disequilibrium and founder-facilitated speciation in wild populations of the zebra finch (Taeniopygia guttata)
    • Balakrishnan, C. N. and S. V. Edwards 2009. Nucleotide variation, linkage disequilibrium and founder-facilitated speciation in wild populations of the zebra finch (Taeniopygia guttata). Genetics 181:645-660.
    • (2009) Genetics , vol.181 , pp. 645-660
    • Balakrishnan, C.N.1    Edwards, S.V.2
  • 6
    • 84886275472 scopus 로고    scopus 로고
    • Shared genetic polymorphisms among species: causes, challenges and opportunities for inferring evolutionary history
    • P. R. Grant and R. B. Grant, eds. Princeton University Press, Princeton, NJ.
    • Balakrishnan, C. N., J. Y. Lee, and S. V. Edwards 2010. Shared genetic polymorphisms among species: causes, challenges and opportunities for inferring evolutionary history. in P. R. Grant and R. B. Grant, eds. From field observations to mechanisms - a program in evolutionary biology. Princeton University Press, Princeton, NJ.
    • (2010) From field observations to mechanisms - a program in evolutionary biology
    • Balakrishnan, C.N.1    Lee, J.Y.2    Edwards, S.V.3
  • 7
    • 20844434817 scopus 로고    scopus 로고
    • Evolutionary analysis of the well characterized endo16 promoter reveals substantial variation within functional sites
    • Balhoff, J. P. and G. A. Wray 2005. Evolutionary analysis of the well characterized endo16 promoter reveals substantial variation within functional sites. Proc. Natl Acad. Sci. USA 102:8591-8596.
    • (2005) Proc. Natl Acad. Sci. USA , vol.102 , pp. 8591-8596
    • Balhoff, J.P.1    Wray, G.A.2
  • 8
    • 13444269543 scopus 로고    scopus 로고
    • Haploview, analysis and visualization of LD and haplotype maps
    • Barrett, J. C., B. Fry, J. Maller, and M. J. Daly 2005. Haploview, analysis and visualization of LD and haplotype maps. Bioinformatics 21:263-265.
    • (2005) Bioinformatics , vol.21 , pp. 263-265
    • Barrett, J.C.1    Fry, B.2    Maller, J.3    Daly, M.J.4
  • 9
    • 1642269679 scopus 로고    scopus 로고
    • Identifying adaptive genetic divergence among populations from genome scans
    • Beaumont, M. A., and D. J. Balding 2004. Identifying adaptive genetic divergence among populations from genome scans. Mol. Ecol. 13:969-980.
    • (2004) Mol. Ecol. , vol.13 , pp. 969-980
    • Beaumont, M.A.1    Balding, D.J.2
  • 10
    • 0025257112 scopus 로고
    • Regulation of the major histocompatibility complex class-II genes: x, y and other letters of the alphabet
    • Benoist, C., and D. Mathis 1990. Regulation of the major histocompatibility complex class-II genes: x, y and other letters of the alphabet. Annu. Rev. Immunol. 8:681-715.
    • (1990) Annu. Rev. Immunol. , vol.8 , pp. 681-715
    • Benoist, C.1    Mathis, D.2
  • 11
    • 48249104040 scopus 로고    scopus 로고
    • High-speed developments in avian genomics
    • Bonneaud, C., J. Burnside, and S. V. Edwards 2008. High-speed developments in avian genomics. Bioscience 58:587-595.
    • (2008) Bioscience , vol.58 , pp. 587-595
    • Bonneaud, C.1    Burnside, J.2    Edwards, S.V.3
  • 12
    • 79956339215 scopus 로고    scopus 로고
    • Rapid evolution of disease resistance is accompanied by functional changes in gene expression in a wild bird
    • Bonneaud, C., S. L. Balenger, A. F. Russell, J. Zhang, G. E. Hill, and S. V. Edwards 2011. Rapid evolution of disease resistance is accompanied by functional changes in gene expression in a wild bird. Proc. Natl Acad. Sci. USA 108:7866-7871.
    • (2011) Proc. Natl Acad. Sci. USA , vol.108 , pp. 7866-7871
    • Bonneaud, C.1    Balenger, S.L.2    Russell, A.F.3    Zhang, J.4    Hill, G.E.5    Edwards, S.V.6
  • 13
    • 84861574328 scopus 로고    scopus 로고
    • Innate immunity and the evolution of resistance to an emerging infectious disease in a wild bird
    • Bonneaud, C., S. L. Balenger, J. Zhang, S. V. Edwards, and G. E. Hill 2012. Innate immunity and the evolution of resistance to an emerging infectious disease in a wild bird. Mol. Ecol. 21:2628-2639.
    • (2012) Mol. Ecol. , vol.21 , pp. 2628-2639
    • Bonneaud, C.1    Balenger, S.L.2    Zhang, J.3    Edwards, S.V.4    Hill, G.E.5
  • 14
    • 65449133181 scopus 로고    scopus 로고
    • Multilocus phylogeography and phylogenetics using sequence-based markers
    • Brito, P. H., and S. V. Edwards 2009. Multilocus phylogeography and phylogenetics using sequence-based markers. Genetica 135:439-455.
    • (2009) Genetica , vol.135 , pp. 439-455
    • Brito, P.H.1    Edwards, S.V.2
  • 15
    • 25444493843 scopus 로고    scopus 로고
    • Reverse transcriptional profiling: non-correspondence of transcript level variation and proximal promoter polymorphism
    • Brown, R. P., and M. E. Feder 2005. Reverse transcriptional profiling: non-correspondence of transcript level variation and proximal promoter polymorphism. BMC genomics 6:110.
    • (2005) BMC genomics , vol.6 , pp. 110
    • Brown, R.P.1    Feder, M.E.2
  • 16
    • 38549096565 scopus 로고    scopus 로고
    • JASPAR, the open access database of transcription factor binding profiles: new content and tools in the 2008 update
    • Bryne, J. C., E. Valen, M. H. Tang, T. Marstrand, O. Winther, I. Da Piedade, et al. 2008. JASPAR, the open access database of transcription factor binding profiles: new content and tools in the 2008 update. Nucleic Acids Res. 36:D102-D106.
    • (2008) Nucleic Acids Res. , vol.36
    • Bryne, J.C.1    Valen, E.2    Tang, M.H.3    Marstrand, T.4    Winther, O.5    Da Piedade, I.6
  • 17
    • 77958514628 scopus 로고    scopus 로고
    • Correlating gene expression variation with cis-regulatory polymorphism in Saccharomyces cerevisiae
    • Chen, K., E. van Nimwegen, N. Rajewsky, and M. L. Siegal 2010. Correlating gene expression variation with cis-regulatory polymorphism in Saccharomyces cerevisiae. Genome Biol. Evol. 2:697-707.
    • (2010) Genome Biol. Evol. , vol.2 , pp. 697-707
    • Chen, K.1    van Nimwegen, E.2    Rajewsky, N.3    Siegal, M.L.4
  • 18
    • 84886277001 scopus 로고    scopus 로고
    • Cornell Lab of Ornithology. Available from
    • Cornell Lab of Ornithology. 2012. House finch disease survey. Available from http://www.birds.cornell.edu/hofi/news.html
    • (2012) House finch disease survey
  • 19
    • 0031873752 scopus 로고    scopus 로고
    • The 90-kDa molecular chaperone family: structure, function, and clinical applications. A comprehensive review
    • Csermely, P., T. Schnaider, C. Soti, Z. Prohászka, and G. Nardai 1998. The 90-kDa molecular chaperone family: structure, function, and clinical applications. A comprehensive review. Pharmacol. Ther. 79:129-168.
    • (1998) Pharmacol. Ther. , vol.79 , pp. 129-168
    • Csermely, P.1    Schnaider, T.2    Soti, C.3    Prohászka, Z.4    Nardai, G.5
  • 20
    • 77957903598 scopus 로고    scopus 로고
    • Multi-platform next-generation sequencing of the domestic turkey (Meleagris gallopavo): genome assembly and analysis
    • Dalloul, R. A., J. A. Long, A. V. Zimin, L. Aslam, K. Beal, L. A. Blomberg, et al. 2010. Multi-platform next-generation sequencing of the domestic turkey (Meleagris gallopavo): genome assembly and analysis. PLoS Biol. 8:e1000475.
    • (2010) PLoS Biol. , vol.8
    • Dalloul, R.A.1    Long, J.A.2    Zimin, A.V.3    Aslam, L.4    Beal, K.5    Blomberg, L.A.6
  • 21
    • 0032041665 scopus 로고    scopus 로고
    • Epidemic mycoplasmal conjunctivitis in house finches from eastern North America
    • Dhondt, A. A., D. L. Tessglia, and R. L. Slothower 1998. Epidemic mycoplasmal conjunctivitis in house finches from eastern North America. J. Wildl. Dis. 34:265-280.
    • (1998) J. Wildl. Dis. , vol.34 , pp. 265-280
    • Dhondt, A.A.1    Tessglia, D.L.2    Slothower, R.L.3
  • 22
  • 23
    • 79959300621 scopus 로고    scopus 로고
    • Applications of next generation sequencing in molecular ecology of non-model organisms
    • Ekblom, R., and J. Galindo 2011. Applications of next generation sequencing in molecular ecology of non-model organisms. Heredity 107:1-15.
    • (2011) Heredity , vol.107 , pp. 1-15
    • Ekblom, R.1    Galindo, J.2
  • 24
    • 40749097777 scopus 로고    scopus 로고
    • Genetic basis of fitness differences in natural populations
    • Ellegren, H., and B. C. Sheldon 2008. Genetic basis of fitness differences in natural populations. Nature 452:169-175.
    • (2008) Nature , vol.452 , pp. 169-175
    • Ellegren, H.1    Sheldon, B.C.2
  • 25
    • 0033057848 scopus 로고    scopus 로고
    • Heat-shock proteins, molecular chaperones, and the stress response: evolutionary and ecological physiology
    • Feder, M. E. 1999. Heat-shock proteins, molecular chaperones, and the stress response: evolutionary and ecological physiology. Annu. Rev. Physiol. 61:243-282.
    • (1999) Annu. Rev. Physiol. , vol.61 , pp. 243-282
    • Feder, M.E.1
  • 26
    • 0042766481 scopus 로고    scopus 로고
    • Evolutionary and ecological functional genomics
    • Feder, M. E., and T. Mitchell-Olds 2003. Evolutionary and ecological functional genomics. Nat. Rev. Genet. 4:651-657.
    • (2003) Nat. Rev. Genet. , vol.4 , pp. 651-657
    • Feder, M.E.1    Mitchell-Olds, T.2
  • 27
    • 0142071644 scopus 로고    scopus 로고
    • Effects of cyclosporin A on the immune responses and pathogenesis of a virulent strain of Mycoplasma gallisepticum in chickens
    • Ganapathy, K., and J. M. Bradbury 2003. Effects of cyclosporin A on the immune responses and pathogenesis of a virulent strain of Mycoplasma gallisepticum in chickens. Avian Pathol. 32:495-502.
    • (2003) Avian Pathol. , vol.32 , pp. 495-502
    • Ganapathy, K.1    Bradbury, J.M.2
  • 28
    • 84864015643 scopus 로고    scopus 로고
    • Population genetics of cis-regulatory sequences that operate during embryonic development in the sea urchin Strongylocentrotus purpuratus
    • Garfield, D., R. Haygood, W. J. Nielsen, and G. A. Wray 2012. Population genetics of cis-regulatory sequences that operate during embryonic development in the sea urchin Strongylocentrotus purpuratus. Evol. Dev. 14:152-211.
    • (2012) Evol. Dev. , vol.14 , pp. 152-211
    • Garfield, D.1    Haygood, R.2    Nielsen, W.J.3    Wray, G.A.4
  • 29
    • 0034124044 scopus 로고    scopus 로고
    • Lymphocytic infiltration in the chicken trachea in response to Mycoplasma gallisepticum infection
    • Gaunson, J. E., C. J. Philip, K. G. Whithear, and G. F. Browning 2000. Lymphocytic infiltration in the chicken trachea in response to Mycoplasma gallisepticum infection. Microbiology 146:1223-1229.
    • (2000) Microbiology , vol.146 , pp. 1223-1229
    • Gaunson, J.E.1    Philip, C.J.2    Whithear, K.G.3    Browning, G.F.4
  • 30
    • 78149432728 scopus 로고    scopus 로고
    • Variable tandem repeats accelerate evolution of coding and regulatory sequences
    • Gemayel, R., M. D. Vinces, M. Legendre, and K. J. Verstrepen 2010. Variable tandem repeats accelerate evolution of coding and regulatory sequences. Annu. Rev. Genet. 44:445-477.
    • (2010) Annu. Rev. Genet. , vol.44 , pp. 445-477
    • Gemayel, R.1    Vinces, M.D.2    Legendre, M.3    Verstrepen, K.J.4
  • 31
    • 33845599829 scopus 로고    scopus 로고
    • Detecting natural selection on cis-regulatory DNA
    • Hahn, M. W. 2007. Detecting natural selection on cis-regulatory DNA. Genetica 129:7-18.
    • (2007) Genetica , vol.129 , pp. 7-18
    • Hahn, M.W.1
  • 32
    • 0035154902 scopus 로고    scopus 로고
    • Regulation of gene expression by GC-rich DNA Cis-elements
    • Hapgood, J. P., J. Riedemann, and S. D. Scherer 2001. Regulation of gene expression by GC-rich DNA Cis-elements. Cell Biol. Int. 25:17-31.
    • (2001) Cell Biol. Int. , vol.25 , pp. 17-31
    • Hapgood, J.P.1    Riedemann, J.2    Scherer, S.D.3
  • 33
    • 84856116745 scopus 로고    scopus 로고
    • Contrasting epidemic histories reveal pathogen-mediated balancing selection on class II MHC diversity in a wild songbird
    • and . :.
    • Hawley, D. M., and R. C. Fleischer 2012. Contrasting epidemic histories reveal pathogen-mediated balancing selection on class II MHC diversity in a wild songbird. PLoS ONE 7:e30222.
    • (2012) PLoS ONE , vol.7
    • Hawley, D.M.1    Fleischer, R.C.2
  • 34
    • 33645094947 scopus 로고    scopus 로고
    • Molecular evidence for a founder effect in invasive house finch (Carpodacus mexicanus) populations experiencing an emergent disease epidemic
    • Hawley, D. M., D. Hanley, A. A. Dhondt, and I. J. Lovette 2006. Molecular evidence for a founder effect in invasive house finch (Carpodacus mexicanus) populations experiencing an emergent disease epidemic. Mol. Ecol. 15:263-275.
    • (2006) Mol. Ecol. , vol.15 , pp. 263-275
    • Hawley, D.M.1    Hanley, D.2    Dhondt, A.A.3    Lovette, I.J.4
  • 35
    • 42549125547 scopus 로고    scopus 로고
    • Reconciling molecular signatures across markers: mitochondrial DNA confirms founder effect in invasive North American house finches (Carpodacus mexicanus)
    • Hawley, D. M., J. Briggs, A. A. Dhondt, and I. J. Lovette 2008. Reconciling molecular signatures across markers: mitochondrial DNA confirms founder effect in invasive North American house finches (Carpodacus mexicanus). Conserv. Genet. 9:637-643.
    • (2008) Conserv. Genet. , vol.9 , pp. 637-643
    • Hawley, D.M.1    Briggs, J.2    Dhondt, A.A.3    Lovette, I.J.4
  • 36
    • 33846112483 scopus 로고    scopus 로고
    • Evolutionary genetics of Carpodacus mexicanus, a recently colonized host of a bacterial pathogen, Mycoplasma gallisepticum
    • Hess, C. M., Z. Wang, and S. V. Edwards 2007. Evolutionary genetics of Carpodacus mexicanus, a recently colonized host of a bacterial pathogen, Mycoplasma gallisepticum. Genetica 129:217-225.
    • (2007) Genetica , vol.129 , pp. 217-225
    • Hess, C.M.1    Wang, Z.2    Edwards, S.V.3
  • 37
    • 0025956944 scopus 로고
    • Plumage coloration is a sexually selected indicator of male quality
    • Hill, G. E. 1991. Plumage coloration is a sexually selected indicator of male quality. Nature 350:337-339.
    • (1991) Nature , vol.350 , pp. 337-339
    • Hill, G.E.1
  • 38
    • 84886277002 scopus 로고
    • House finch (Carpodacus mexicanus). The birds of North America online. Cornell Lab of Ornithology, Ithaca, NY. Available at
    • Hill, G. E. 1993. House finch (Carpodacus mexicanus). The birds of North America online. Cornell Lab of Ornithology, Ithaca, NY. Available at http://bna.birds.cornell.edu/bna.html/species/046
    • (1993)
    • Hill, G.E.1
  • 40
    • 12944322668 scopus 로고    scopus 로고
    • Carotenoid-based plumage coloration predicts resistance to a novel parasite in the house finch
    • Hill, G. E., and K. L. Farmer 2005. Carotenoid-based plumage coloration predicts resistance to a novel parasite in the house finch. Naturwissenschaften 92:30-34.
    • (2005) Naturwissenschaften , vol.92 , pp. 30-34
    • Hill, G.E.1    Farmer, K.L.2
  • 41
    • 13144306071 scopus 로고    scopus 로고
    • Genome-wide association studies for common diseases and complex traits
    • Hirschhorn, J. N., and M. J. Daly 2005. Genome-wide association studies for common diseases and complex traits. Nat. Rev. Genet. 6:95-108.
    • (2005) Nat. Rev. Genet. , vol.6 , pp. 95-108
    • Hirschhorn, J.N.1    Daly, M.J.2
  • 42
    • 49849092907 scopus 로고    scopus 로고
    • Simultaneous inference in general parametric models
    • Hothorn, T., F. Bretz, and P. Westfall 2008. Simultaneous inference in general parametric models. Biom. J. 50:346-363.
    • (2008) Biom. J. , vol.50 , pp. 346-363
    • Hothorn, T.1    Bretz, F.2    Westfall, P.3
  • 44
    • 20444420144 scopus 로고    scopus 로고
    • Transcriptional regulation of the murine C5a receptor gene: NF-Y is required for basal and LPS induced expression in macrophages and endothelial cells
    • Hunt, J. R., C. B. Martin, and B. K. Martin 2005. Transcriptional regulation of the murine C5a receptor gene: NF-Y is required for basal and LPS induced expression in macrophages and endothelial cells. Mol. Immunol. 42:1405-1415.
    • (2005) Mol. Immunol. , vol.42 , pp. 1405-1415
    • Hunt, J.R.1    Martin, C.B.2    Martin, B.K.3
  • 45
    • 10644283823 scopus 로고    scopus 로고
    • Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution
    • ICGSC.
    • ICGSC. 2004. Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution. Nature 432:695-716.
    • (2004) Nature , vol.432 , pp. 695-716
  • 46
    • 10644271562 scopus 로고    scopus 로고
    • A genetic variation map for chicken with 2.8 million single-nucleotide polymorphisms
    • ICPMC
    • ICPMC. 2004. A genetic variation map for chicken with 2.8 million single-nucleotide polymorphisms. Nature 432:717-722.
    • (2004) Nature , vol.432 , pp. 717-722
  • 47
    • 0036318460 scopus 로고    scopus 로고
    • Major histocompatibility complex class II transcriptional platform: assembly of nuclear factor Y and regulatory factor X (RFX) on DNA requires RFX5 dimers
    • Jabrane-Ferrat, N., N. Nekrep, G. Tosi, L. J. Esserman, and B. M. Peterlin 2002. Major histocompatibility complex class II transcriptional platform: assembly of nuclear factor Y and regulatory factor X (RFX) on DNA requires RFX5 dimers. Mol. Cell. Biol. 22:5616-5625.
    • (2002) Mol. Cell. Biol. , vol.22 , pp. 5616-5625
    • Jabrane-Ferrat, N.1    Nekrep, N.2    Tosi, G.3    Esserman, L.J.4    Peterlin, B.M.5
  • 49
    • 22144440528 scopus 로고    scopus 로고
    • Toward a neutral evolutionary model of gene expression
    • Khaitovich, P., S. Pääbo, and G. Weiss 2005. Toward a neutral evolutionary model of gene expression. Genetics 170:929-939.
    • (2005) Genetics , vol.170 , pp. 929-939
    • Khaitovich, P.1    Pääbo, S.2    Weiss, G.3
  • 50
    • 0030127226 scopus 로고    scopus 로고
    • Mycoplasma gallisepticum isolated from house finches (Carpodacus mexicanus) with conjunctivitis
    • Ley, D. H., J. E. Berkhoff, and J. M. McLaren 1996. Mycoplasma gallisepticum isolated from house finches (Carpodacus mexicanus) with conjunctivitis. Avian Dis. 40:480-483.
    • (1996) Avian Dis. , vol.40 , pp. 480-483
    • Ley, D.H.1    Berkhoff, J.E.2    McLaren, J.M.3
  • 51
    • 0026075499 scopus 로고
    • One subunit of the transcription factor NF-Y maps close to the major histocompatibility complex in murine and human chromosomes
    • Li, X. Y., M. G. Mattei, Z. XZaleska-Rutczynska, R. Hooft van Huijsduijnen, F. Figueroa, J. Nadeau, et al. 1991. One subunit of the transcription factor NF-Y maps close to the major histocompatibility complex in murine and human chromosomes. Genomics 11:630-634.
    • (1991) Genomics , vol.11 , pp. 630-634
    • Li, X.Y.1    Mattei, M.G.2    XZaleska-Rutczynska, Z.3    Hooft van Huijsduijnen, R.4    Figueroa, F.5    Nadeau, J.6
  • 52
    • 65649117685 scopus 로고    scopus 로고
    • DnaSP v5: a software for comprehensive analysis of DNA polymorphism data
    • Librado, P., and J. Rozas 2009. DnaSP v5: a software for comprehensive analysis of DNA polymorphism data. Bioinformatics 25:1451-1452.
    • (2009) Bioinformatics , vol.25 , pp. 1451-1452
    • Librado, P.1    Rozas, J.2
  • 53
    • 0032078929 scopus 로고    scopus 로고
    • Role of the CCAAT-binding protein CBF/NF-Y in transcription
    • Maity, S. N., and B. de Crombrugghe 1998. Role of the CCAAT-binding protein CBF/NF-Y in transcription. Trends Biochem. Sci. 23:174-178.
    • (1998) Trends Biochem. Sci. , vol.23 , pp. 174-178
    • Maity, S.N.1    de Crombrugghe, B.2
  • 55
    • 84868101450 scopus 로고    scopus 로고
    • Faster-X evolution of gene expression in Drosophila
    • Meisel, R. P., J. H. Malone, and A. G. Clark 2012. Faster-X evolution of gene expression in Drosophila. PLoS Genet. 8:e1003013.
    • (2012) PLoS Genet. , vol.8
    • Meisel, R.P.1    Malone, J.H.2    Clark, A.G.3
  • 56
    • 36549052173 scopus 로고    scopus 로고
    • Chemokine and cytokine gene expression profiles in chickens inoculated with Mycoplasma gallisepticum strains Rlow or GT5
    • Mohammed, J., S. J. Frasca, K. Cecchini, D. Rood, A. C. Nyaoke, S. J. Geary, et al. 2007. Chemokine and cytokine gene expression profiles in chickens inoculated with Mycoplasma gallisepticum strains Rlow or GT5. Vaccine 25:8611-8621.
    • (2007) Vaccine , vol.25 , pp. 8611-8621
    • Mohammed, J.1    Frasca, S.J.2    Cecchini, K.3    Rood, D.4    Nyaoke, A.C.5    Geary, S.J.6
  • 57
  • 58
    • 77949283529 scopus 로고    scopus 로고
    • Characterising functionally important and ecologically meaningful genetic diversity using a candidate gene approach
    • Piertney, S. B., and L. M. Webster 2010. Characterising functionally important and ecologically meaningful genetic diversity using a candidate gene approach. Genetica 138:419-432.
    • (2010) Genetica , vol.138 , pp. 419-432
    • Piertney, S.B.1    Webster, L.M.2
  • 59
    • 0031895351 scopus 로고    scopus 로고
    • The hsp90-based chaperone system: involvement in signal transduction from a variety of hormone and growth factor receptors
    • Pratt, W. 1998. The hsp90-based chaperone system: involvement in signal transduction from a variety of hormone and growth factor receptors. Exp. Biol. Med. 217:420-434.
    • (1998) Exp. Biol. Med. , vol.217 , pp. 420-434
    • Pratt, W.1
  • 60
    • 77953811255 scopus 로고    scopus 로고
    • New approaches to population stratification in genome-wide association studies
    • Price, A. L., N. A. Zaitlen, D. Reich, and N. Patterson 2010. New approaches to population stratification in genome-wide association studies. Nat. Rev. Genet. 11:459-463.
    • (2010) Nat. Rev. Genet. , vol.11 , pp. 459-463
    • Price, A.L.1    Zaitlen, N.A.2    Reich, D.3    Patterson, N.4
  • 61
    • 0031770391 scopus 로고    scopus 로고
    • Molecular biology and pathogenicity of mycoplasmas
    • Razin, S., D. Yogev, and Y. Naot 1998. Molecular biology and pathogenicity of mycoplasmas. Microbiol. Mol. Biol. Rev. 62:1094-1156.
    • (1998) Microbiol. Mol. Biol. Rev. , vol.62 , pp. 1094-1156
    • Razin, S.1    Yogev, D.2    Naot, Y.3
  • 63
    • 57049145374 scopus 로고    scopus 로고
    • Searching for disease susceptibility variants in structured populations
    • Roeder, K., and D. Luca 2009. Searching for disease susceptibility variants in structured populations. Genomics 93:1-4.
    • (2009) Genomics , vol.93 , pp. 1-4
    • Roeder, K.1    Luca, D.2
  • 64
    • 13444261413 scopus 로고    scopus 로고
    • Quantitative trait locus mapping in natural populations: progress, caveats and future directions
    • Slate, J. 2005. Quantitative trait locus mapping in natural populations: progress, caveats and future directions. Mol. Ecol. 14:363-379.
    • (2005) Mol. Ecol. , vol.14 , pp. 363-379
    • Slate, J.1
  • 65
    • 0036512171 scopus 로고    scopus 로고
    • Roles of heat-shock proteins in innate and adaptive immunity. Nature reviews
    • Srivastava, P. 2002. Roles of heat-shock proteins in innate and adaptive immunity. Nature reviews. Immunology 2:185-194.
    • (2002) Immunology , vol.2 , pp. 185-194
    • Srivastava, P.1
  • 66
    • 38549103015 scopus 로고    scopus 로고
    • Combining population genomics and quantitative genetics: finding the genes underlying ecologically important traits
    • Stinchombe, J. R., and H. E. Hoekstra 2008. Combining population genomics and quantitative genetics: finding the genes underlying ecologically important traits. Heredity 100:158-170.
    • (2008) Heredity , vol.100 , pp. 158-170
    • Stinchombe, J.R.1    Hoekstra, H.E.2
  • 67
    • 0036255811 scopus 로고    scopus 로고
    • Candidate-gene approaches for studying complex genetic traits: practical considerations
    • Tabor, H. K., N. J. Risch, and R. M. Myers 2002. Candidate-gene approaches for studying complex genetic traits: practical considerations. Nat. Rev. Genet. 3:391-397.
    • (2002) Nat. Rev. Genet. , vol.3 , pp. 391-397
    • Tabor, H.K.1    Risch, N.J.2    Myers, R.M.3
  • 68
    • 34547781750 scopus 로고    scopus 로고
    • MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) Software Version 4.0
    • Tamura, K., J. Dudley, M. Nei, and S. Kumar 2007. MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) Software Version 4.0. Mol. Biol. Evol. 24:1596-1599.
    • (2007) Mol. Biol. Evol. , vol.24 , pp. 1596-1599
    • Tamura, K.1    Dudley, J.2    Nei, M.3    Kumar, S.4
  • 69
    • 0027968068 scopus 로고
    • CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
    • Thompson, J. D., D. G. Higgins, and T. J. Gibson 1994. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res. 22:4673-4680.
    • (1994) Nucleic Acids Res. , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 70
    • 67149133632 scopus 로고    scopus 로고
    • Heat shock proteins and immune system
    • Tsan, M. F., and B. Gao 2009. Heat shock proteins and immune system. J. Leukoc. Biol. 85:905-910.
    • (2009) J. Leukoc. Biol. , vol.85 , pp. 905-910
    • Tsan, M.F.1    Gao, B.2
  • 73
    • 0347135844 scopus 로고    scopus 로고
    • Reconciling actual and infected population histories in the house finch (Carpodacus mexicanus) by AFLP analysis
    • Wang, Z., A. J. Baker, G. E. Hill, and S. V. Edwards 2003. Reconciling actual and infected population histories in the house finch (Carpodacus mexicanus) by AFLP analysis. Evolution 37:2852-2864.
    • (2003) Evolution , vol.37 , pp. 2852-2864
    • Wang, Z.1    Baker, A.J.2    Hill, G.E.3    Edwards, S.V.4
  • 74
    • 33645521005 scopus 로고    scopus 로고
    • A cDNA macroarray approach to parasite-induced gene expression changes in a songbird host: genetic response of house finches to experimental infection by Mycoplasma gallisepticum
    • Wang, Z., K. Farmer, G. E. Hill, and S. V. Edwards 2006. A cDNA macroarray approach to parasite-induced gene expression changes in a songbird host: genetic response of house finches to experimental infection by Mycoplasma gallisepticum. Mol. Ecol. 15:1263-1273.
    • (2006) Mol. Ecol. , vol.15 , pp. 1263-1273
    • Wang, Z.1    Farmer, K.2    Hill, G.E.3    Edwards, S.V.4
  • 76
    • 83855163414 scopus 로고    scopus 로고
    • Cis-regulatory elements: molecular mechanisms and evolutionary processes underlying divergence
    • Wittkopp, P. J., and G. Kalay 2012. Cis-regulatory elements: molecular mechanisms and evolutionary processes underlying divergence. Nat. Rev. Genet. 13:59-69.
    • (2012) Nat. Rev. Genet. , vol.13 , pp. 59-69
    • Wittkopp, P.J.1    Kalay, G.2
  • 77
    • 33847057226 scopus 로고    scopus 로고
    • The evolutionary significance of cis-regulatory mutations
    • Wray, G. A. 2007. The evolutionary significance of cis-regulatory mutations. Nat. Rev. Genet. 8:206-216.
    • (2007) Nat. Rev. Genet. , vol.8 , pp. 206-216
    • Wray, G.A.1
  • 78
    • 0034848170 scopus 로고    scopus 로고
    • DAMBE: data analysis in molecular biology and evolution
    • Xia, X., and Z. Xie 2001. DAMBE: data analysis in molecular biology and evolution. J. Hered. 92:371-373.
    • (2001) J. Hered. , vol.92 , pp. 371-373
    • Xia, X.1    Xie, Z.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.