-
1
-
-
0033976458
-
The Pfam protein families database
-
Bateman A, et al. (2000) The Pfam protein families database. Nucleic Acids Res 28(1): 263-266.
-
(2000)
Nucleic Acids Res
, vol.28
, Issue.1
, pp. 263-266
-
-
Bateman, A.1
-
2
-
-
0033954256
-
The protein data bank
-
Berman HM, et al. (2000) The Protein Data Bank. Nucleic Acids Res 28(1):235-242.
-
(2000)
Nucleic Acids Res
, vol.28
, Issue.1
, pp. 235-242
-
-
Berman, H.M.1
-
3
-
-
0030660580
-
Gene families: The taxonomy of protein paralogs and chimeras
-
Henikoff S, et al. (1997) Gene families: The taxonomy of protein paralogs and chimeras. Science 278(5338):609-614.
-
(1997)
Science
, vol.278
, Issue.5338
, pp. 609-614
-
-
Henikoff, S.1
-
4
-
-
0344825356
-
P-glycoprotein: From genomics to mechanism
-
Ambudkar SV, Kimchi-Sarfaty C, Sauna ZE, Gottesman MM (2003) P-glycoprotein: From genomics to mechanism. Oncogene 22(47):7468-7485.
-
(2003)
Oncogene
, vol.22
, Issue.47
, pp. 7468-7485
-
-
Ambudkar, S.V.1
Kimchi-Sarfaty, C.2
Sauna, Z.E.3
Gottesman, M.M.4
-
6
-
-
0035014565
-
The ABC of ABCS: A phylogenetic and functional classification of ABC systems in living organisms
-
Dassa E, Bouige P (2001) The ABC of ABCS: A phylogenetic and functional classification of ABC systems in living organisms. Res Microbiol 152(3-4):211-229.
-
(2001)
Res Microbiol
, vol.152
, Issue.3-4
, pp. 211-229
-
-
Dassa, E.1
Bouige, P.2
-
7
-
-
44949249999
-
Structure, function, and evolution of bacterial ATP-binding cassette systems
-
Davidson AL, Dassa E, Orelle C, Chen J (2008) Structure, function, and evolution of bacterial ATP-binding cassette systems. Microbiol Mol Biol Rev 72(2):317-364.
-
(2008)
Microbiol Mol Biol Rev
, vol.72
, Issue.2
, pp. 317-364
-
-
Davidson, A.L.1
Dassa, E.2
Orelle, C.3
Chen, J.4
-
8
-
-
0026621245
-
ABC transporters: From microorganisms to man
-
Higgins CF (1992) ABC transporters: From microorganisms to man. Annu Rev Cell Biol 8:67-113.
-
(1992)
Annu Rev Cell Biol
, vol.8
, pp. 67-113
-
-
Higgins, C.F.1
-
9
-
-
0035019469
-
ABC transporters: Physiology, structure and mechanism-an overview
-
Higgins CF (2001) ABC transporters: Physiology, structure and mechanism-an overview. Res Microbiol 152(3-4):205-210.
-
(2001)
Res Microbiol
, vol.152
, Issue.3-4
, pp. 205-210
-
-
Higgins, C.F.1
-
10
-
-
85163545088
-
-
(Academic, London)
-
Holland IB, Cole SPC, Kuchler K, Higgins CF, eds (2003) ABC Proteins: From Bacteria to Man (Academic, London), p 647.
-
(2003)
ABC Proteins: From Bacteria to Man
, pp. 647
-
-
Holland, I.B.1
Cole, S.P.C.2
Kuchler, K.3
Higgins, C.F.4
-
11
-
-
0035190234
-
A plastidic ABC protein involved in intercompartmental communication of light signaling
-
Møller SG, Kunkel T, Chua N-H (2001) A plastidic ABC protein involved in intercompartmental communication of light signaling. Genes Dev 15(1):90-103.
-
(2001)
Genes Dev
, vol.15
, Issue.1
, pp. 90-103
-
-
Møller, S.G.1
Kunkel, T.2
Chua, N.-H.3
-
12
-
-
69949150092
-
ABC50 promotes translation initiation in mammalian cells
-
Paytubi S, et al. (2009) ABC50 promotes translation initiation in mammalian cells. J Biol Chem 284(36):24061-24073.
-
(2009)
J Biol Chem
, vol.284
, Issue.36
, pp. 24061-24073
-
-
Paytubi, S.1
-
13
-
-
1642540997
-
A predicted ABC transporter, FtsEX, is needed for cell division in Escherichia coli
-
Schmidt KL, et al. (2004) A predicted ABC transporter, FtsEX, is needed for cell division in Escherichia coli. J Bacteriol 186(3):785-793.
-
(2004)
J Bacteriol
, vol.186
, Issue.3
, pp. 785-793
-
-
Schmidt, K.L.1
-
14
-
-
77955895736
-
ABC proteins in antigen translocation and viral inhibition
-
Parcej D, Tampé R (2010) ABC proteins in antigen translocation and viral inhibition. Nat Chem Biol 6(8):572-580.
-
(2010)
Nat Chem Biol
, vol.6
, Issue.8
, pp. 572-580
-
-
Parcej, D.1
Tampé, R.2
-
15
-
-
0037052565
-
The E. coli BtuCD structure: A framework for ABC transporter architecture and mechanism
-
Locher KP, Lee AT, Rees DC (2002) The E. coli BtuCD structure: A framework for ABC transporter architecture and mechanism. Science 296(5570):1091-1098.
-
(2002)
Science
, vol.296
, Issue.5570
, pp. 1091-1098
-
-
Locher, K.P.1
Lee, A.T.2
Rees, D.C.3
-
16
-
-
33846601303
-
An inward-facing conformation of a putative metal-chelate-type ABC transporter
-
Pinkett HW, Lee AT, Lum P, Locher KP, Rees DC (2007) An inward-facing conformation of a putative metal-chelate-type ABC transporter. Science 315(5810):373-377.
-
(2007)
Science
, vol.315
, Issue.5810
, pp. 373-377
-
-
Pinkett, H.W.1
Lee, A.T.2
Lum, P.3
Locher, K.P.4
Rees, D.C.5
-
17
-
-
47249084799
-
The high-affinity E. coli methionine ABC transporter: Structure and allosteric regulation
-
Kadaba NS, Kaiser JT, Johnson E, Lee A, Rees DC (2008) The high-affinity E. coli methionine ABC transporter: Structure and allosteric regulation. Science 321(5886): 250-253.
-
(2008)
Science
, vol.321
, Issue.5886
, pp. 250-253
-
-
Kadaba, N.S.1
Kaiser, J.T.2
Johnson, E.3
Lee, A.4
Rees, D.C.5
-
18
-
-
36549018568
-
Crystal structure of a catalytic intermediate of the maltose transporter
-
Oldham ML, Khare D, Quiocho FA, Davidson AL, Chen J (2007) Crystal structure of a catalytic intermediate of the maltose transporter. Nature 450(7169):515-521.
-
(2007)
Nature
, vol.450
, Issue.7169
, pp. 515-521
-
-
Oldham, M.L.1
Khare, D.2
Quiocho, F.A.3
Davidson, A.L.4
Chen, J.5
-
19
-
-
0344442852
-
On the role of the two extracytoplasmic substrate-binding domains in the ABC transporter OpuA
-
Biemans-Oldehinkel E, Poolman B (2003) On the role of the two extracytoplasmic substrate-binding domains in the ABC transporter OpuA. EMBO J 22(22):5983-5993.
-
(2003)
EMBO J
, vol.22
, Issue.22
, pp. 5983-5993
-
-
Biemans-Oldehinkel, E.1
Poolman, B.2
-
20
-
-
0035852667
-
Trapping the transition state of an ATP-binding cassette transporter: Evidence for a concerted mechanism of maltose transport
-
Chen J, Sharma S, Quiocho FA, Davidson AL (2001) Trapping the transition state of an ATP-binding cassette transporter: Evidence for a concerted mechanism of maltose transport. Proc Natl Acad Sci USA 98(4):1525-1530.
-
(2001)
Proc Natl Acad Sci USA
, vol.98
, Issue.4
, pp. 1525-1530
-
-
Chen, J.1
Sharma, S.2
Quiocho, F.A.3
Davidson, A.L.4
-
21
-
-
51349104365
-
Both maltose-binding protein and ATP are required for nucleotide-binding domain closure in the intact maltose ABC transporter
-
Orelle C, Ayvaz T, Everly RM, Klug CS, Davidson AL (2008) Both maltose-binding protein and ATP are required for nucleotide-binding domain closure in the intact maltose ABC transporter. Proc Natl Acad Sci USA 105(35):12837-12842.
-
(2008)
Proc Natl Acad Sci USA
, vol.105
, Issue.35
, pp. 12837-12842
-
-
Orelle, C.1
Ayvaz, T.2
Everly, R.M.3
Klug, C.S.4
Davidson, A.L.5
-
22
-
-
33947154878
-
Structure of an ABC transporter in complex with its binding protein
-
Hollenstein K, Frei DC, Locher KP (2007) Structure of an ABC transporter in complex with its binding protein. Nature 446(7132):213-216.
-
(2007)
Nature
, vol.446
, Issue.7132
, pp. 213-216
-
-
Hollenstein, K.1
Frei, D.C.2
Locher, K.P.3
-
23
-
-
4744358624
-
The ATP switch model for ABC transporters
-
Higgins CF, Linton KJ (2004) The ATP switch model for ABC transporters. Nat Struct Mol Biol 11(10):918-926.
-
(2004)
Nat Struct Mol Biol
, vol.11
, Issue.10
, pp. 918-926
-
-
Higgins, C.F.1
Linton, K.J.2
-
24
-
-
4143115811
-
Structure and mechanism of ABC transporters
-
Locher KP (2004) Structure and mechanism of ABC transporters. Curr Opin Struct Biol 14(4):426-431.
-
(2004)
Curr Opin Struct Biol
, vol.14
, Issue.4
, pp. 426-431
-
-
Locher, K.P.1
-
25
-
-
29144502288
-
ATP hydrolysis is required to reset the ATP-binding cassette dimer into the resting-state conformation
-
Lu G, Westbrooks JM, Davidson AL, Chen J (2005) ATP hydrolysis is required to reset the ATP-binding cassette dimer into the resting-state conformation. Proc Natl Acad Sci USA 102(50):17969-17974.
-
(2005)
Proc Natl Acad Sci USA
, vol.102
, Issue.50
, pp. 17969-17974
-
-
Lu, G.1
Westbrooks, J.M.2
Davidson, A.L.3
Chen, J.4
-
27
-
-
58149512047
-
Distinct gate conformations of the ABC transporter BtuCD revealed by electron spin resonance spectroscopy and chemical crosslinking
-
Goetz BA, Perozo E, Locher KP (2009) Distinct gate conformations of the ABC transporter BtuCD revealed by electron spin resonance spectroscopy and chemical crosslinking. FEBS Lett 583(2):266-270.
-
(2009)
FEBS Lett
, vol.583
, Issue.2
, pp. 266-270
-
-
Goetz, B.A.1
Perozo, E.2
Locher, K.P.3
-
28
-
-
81755171418
-
Transmembrane gate movements in the type II ATP-binding cassette (ABC) importer BtuCD-F during nucleotide cycle
-
Joseph B, Jeschke G, Goetz BA, Locher KP, Bordignon E (2011) Transmembrane gate movements in the type II ATP-binding cassette (ABC) importer BtuCD-F during nucleotide cycle. J Biol Chem 286(47):41008-41017.
-
(2011)
J Biol Chem
, vol.286
, Issue.47
, pp. 41008-41017
-
-
Joseph, B.1
Jeschke, G.2
Goetz, B.A.3
Locher, K.P.4
Bordignon, E.5
-
29
-
-
77949263042
-
A distinct mechanism for the ABC transporter BtuCD-BtuF revealed by the dynamics of complex formation
-
Lewinson O, Lee AT, Locher KP, Rees DC (2010) A distinct mechanism for the ABC transporter BtuCD-BtuF revealed by the dynamics of complex formation. Nat Struct Mol Biol 17(3):332-338.
-
(2010)
Nat Struct Mol Biol
, vol.17
, Issue.3
, pp. 332-338
-
-
Lewinson, O.1
Lee, A.T.2
Locher, K.P.3
Rees, D.C.4
-
30
-
-
84855849842
-
The conformational transition pathways of ATPbinding cassette transporter BtuCD revealed by targeted molecular dynamics simulation
-
Weng J, Fan K, Wang W (2012) The conformational transition pathways of ATPbinding cassette transporter BtuCD revealed by targeted molecular dynamics simulation. PLoS One 7(1):e30465.
-
(2012)
PLoS One
, vol.7
, Issue.1
-
-
Weng, J.1
Fan, K.2
Wang, W.3
-
31
-
-
84867670628
-
Structure of AMP-PNP-bound vitamin B12 transporter BtuCD-F
-
Korkhov VM, Mireku SA, Locher KP (2012) Structure of AMP-PNP-bound vitamin B12 transporter BtuCD-F. Nature 490(7420):367-372.
-
(2012)
Nature
, vol.490
, Issue.7420
, pp. 367-372
-
-
Korkhov, V.M.1
Mireku, S.A.2
Locher, K.P.3
-
32
-
-
28944442871
-
In vitro functional characterization of BtuCD-F, the Escherichia coli ABC transporter for vitamin B12 uptake
-
Borths EL, Poolman B, Hvorup RN, Locher KP, Rees DC (2005) In vitro functional characterization of BtuCD-F, the Escherichia coli ABC transporter for vitamin B12 uptake. Biochemistry 44(49):16301-16309.
-
(2005)
Biochemistry
, vol.44
, Issue.49
, pp. 16301-16309
-
-
Borths, E.L.1
Poolman, B.2
Hvorup, R.N.3
Locher, K.P.4
Rees, D.C.5
-
33
-
-
44649144487
-
Bifunctional enhancement of a β-glucanase-xylanase fusion enzyme by optimization of peptide linkers
-
Lu P, Feng MG (2008) Bifunctional enhancement of a β-glucanase- xylanase fusion enzyme by optimization of peptide linkers. Appl Microbiol Biotechnol 79(4):579-587.
-
(2008)
Appl Microbiol Biotechnol
, vol.79
, Issue.4
, pp. 579-587
-
-
Lu, P.1
Feng, M.G.2
-
34
-
-
0026630973
-
Comparison of cobalamin-independent and cobalamin-dependent methionine synthases from Escherichia coli: Two solutions to the same chemical problem
-
González JCBR, Banerjee RV, Huang S, Sumner JS, Matthews RG (1992) Comparison of cobalamin-independent and cobalamin-dependent methionine synthases from Escherichia coli: Two solutions to the same chemical problem. Biochemistry 31(26): 6045-6056.
-
(1992)
Biochemistry
, vol.31
, Issue.26
, pp. 6045-6056
-
-
González, J.C.B.R.1
Banerjee, R.V.2
Huang, S.3
Sumner, J.S.4
Matthews, R.G.5
-
35
-
-
0036180115
-
Identification of the periplasmic cobalamin-binding protein BtuF of Escherichia coli
-
Cadieux N, et al. (2002) Identification of the periplasmic cobalamin-binding protein BtuF of Escherichia coli. J Bacteriol 184(3):706-717.
-
(2002)
J Bacteriol
, vol.184
, Issue.3
, pp. 706-717
-
-
Cadieux, N.1
-
36
-
-
0020637113
-
Reconstitution of maltose transport in Escherichia coli: Conditions affecting import of maltose-binding protein into the periplasm of calcium-treated cells
-
Brass JMEU, Ehmann U, Bukau B (1983) Reconstitution of maltose transport in Escherichia coli: Conditions affecting import of maltose-binding protein into the periplasm of calcium-treated cells. J Bacteriol 155(1):97-106.
-
(1983)
J Bacteriol
, vol.155
, Issue.1
, pp. 97-106
-
-
Brass, J.M.E.U.1
Ehmann, U.2
Bukau, B.3
-
37
-
-
0029161554
-
In vivo reconstitution of an active siderophore transport system by a binding protein derivative lacking a signal sequence
-
Rohrback MR, Paul S, Köster W (1995) In vivo reconstitution of an active siderophore transport system by a binding protein derivative lacking a signal sequence. Mol Gen Genet 248(1):33-42.
-
(1995)
Mol Gen Genet
, vol.248
, Issue.1
, pp. 33-42
-
-
Rohrback, M.R.1
Paul, S.2
Köster, W.3
-
38
-
-
0030886132
-
Mutation of a single MalK subunit severely impairs maltose transport activity in Escherichia coli
-
Davidson AL, Sharma S (1997) Mutation of a single MalK subunit severely impairs maltose transport activity in Escherichia coli. J Bacteriol 179(17):5458-5464.
-
(1997)
J Bacteriol
, vol.179
, Issue.17
, pp. 5458-5464
-
-
Davidson, A.L.1
Sharma, S.2
-
39
-
-
0029868327
-
The maltose transport system of Escherichia coli displays positive cooperativity in ATP hydrolysis
-
Davidson AL, Laghaeian SS, Mannering DE (1996) The maltose transport system of Escherichia coli displays positive cooperativity in ATP hydrolysis. J Biol Chem 271(9): 4858-4863.
-
(1996)
J Biol Chem
, vol.271
, Issue.9
, pp. 4858-4863
-
-
Davidson, A.L.1
Laghaeian, S.S.2
Mannering, D.E.3
-
40
-
-
0030803791
-
Characterization of the adenosine triphosphatase activity of the periplasmic histidine permease, a traffic ATPase (ABC transporter)
-
Liu CE, Liu P-Q, Ames GF-L (1997) Characterization of the adenosine triphosphatase activity of the periplasmic histidine permease, a traffic ATPase (ABC transporter). J Biol Chem 272(35):21883-21891.
-
(1997)
J Biol Chem
, vol.272
, Issue.35
, pp. 21883-21891
-
-
Liu, C.E.1
Liu, P.-Q.2
Gf-L, A.3
-
41
-
-
0037077296
-
Cooperative, ATP-dependent association of the nucleotide binding cassettes during the catalytic cycle of ATPbinding cassette transporters
-
Moody JE, Millen L, Binns D, Hunt JF, Thomas PJ (2002) Cooperative, ATP-dependent association of the nucleotide binding cassettes during the catalytic cycle of ATPbinding cassette transporters. J Biol Chem 277(24):21111-21114.
-
(2002)
J Biol Chem
, vol.277
, Issue.24
, pp. 21111-21114
-
-
Moody, J.E.1
Millen, L.2
Binns, D.3
Hunt, J.F.4
Thomas, P.J.5
-
42
-
-
0036342413
-
ATP binding to the motor domain from an ABC transporter drives formation of a nucleotide sandwich dimer
-
Smith PC, et al. (2002) ATP binding to the motor domain from an ABC transporter drives formation of a nucleotide sandwich dimer. Mol Cell 10(1):139-149.
-
(2002)
Mol Cell
, vol.10
, Issue.1
, pp. 139-149
-
-
Smith, P.C.1
-
43
-
-
79953183043
-
Asymmetric ATP hydrolysis cycle of the heterodimeric multidrug ABC transport complex TmrAB from Thermus thermophilus
-
Zutz A, et al. (2011) Asymmetric ATP hydrolysis cycle of the heterodimeric multidrug ABC transport complex TmrAB from Thermus thermophilus. J Biol Chem 286(9): 7104-7115.
-
(2011)
J Biol Chem
, vol.286
, Issue.9
, pp. 7104-7115
-
-
Zutz, A.1
-
44
-
-
0035957431
-
Allosteric crosstalk between peptide-binding, transport, and ATP hydrolysis of the ABC transporter TAP
-
Gorbulev S, Abele R, Tampé R (2001) Allosteric crosstalk between peptide-binding, transport, and ATP hydrolysis of the ABC transporter TAP. Proc Natl Acad Sci USA 98(7):3732-3737.
-
(2001)
Proc Natl Acad Sci USA
, vol.98
, Issue.7
, pp. 3732-3737
-
-
Gorbulev, S.1
Abele, R.2
Tampé, R.3
-
45
-
-
0037073730
-
Characterization of drug transport, ATP hydrolysis, and nucleotide trapping by the human ABCG2 multidrug transporter. Modulation of substrate specificity by a point mutation
-
Ozvegy C, Váradi A, Sarkadi B (2002) Characterization of drug transport, ATP hydrolysis, and nucleotide trapping by the human ABCG2 multidrug transporter. Modulation of substrate specificity by a point mutation. J Biol Chem 277(50): 47980-47990.
-
(2002)
J Biol Chem
, vol.277
, Issue.50
, pp. 47980-47990
-
-
Ozvegy, C.1
Váradi, A.2
Sarkadi, B.3
-
46
-
-
58849097677
-
Residues responsible for the asymmetric function of the nucleotide binding domains of multidrug resistance protein1
-
Qin L, et al. (2008) Residues responsible for the asymmetric function of the nucleotide binding domains of multidrug resistance protein1. Biochemistry 47(52):13952-13965.
-
(2008)
Biochemistry
, vol.47
, Issue.52
, pp. 13952-13965
-
-
Qin, L.1
-
47
-
-
79953220143
-
Sequences in the nonconsensus nucleotide-binding domain of ABCG5/ABCG8 required for sterol transport
-
Wang J, et al. (2011) Sequences in the nonconsensus nucleotide-binding domain of ABCG5/ABCG8 required for sterol transport. J Biol Chem 286(9):7308-7314.
-
(2011)
J Biol Chem
, vol.286
, Issue.9
, pp. 7308-7314
-
-
Wang, J.1
-
48
-
-
0015077529
-
Isolation of vitamin B 12 transport mutants of Escherichia coli
-
Di Girolamo PM, Kadner RJ, Bradbeer C (1971) Isolation of vitamin B 12 transport mutants of Escherichia coli. J Bacteriol 106(3):751-757.
-
(1971)
J Bacteriol
, vol.106
, Issue.3
, pp. 751-757
-
-
Di Girolamo, P.M.1
Kadner, R.J.2
Bradbeer, C.3
-
49
-
-
0034612342
-
One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products
-
Datsenko KA, Wanner BL (2000) One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products. Proc Natl Acad Sci USA 97(12):6640-6645.
-
(2000)
Proc Natl Acad Sci USA
, vol.97
, Issue.12
, pp. 6640-6645
-
-
Datsenko, K.A.1
Wanner, B.L.2
-
50
-
-
31544450286
-
Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: The Keio collection
-
Baba T, et al. (2006) Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: The Keio collection. Mol Syst Biol 2(8):, 2006.0008.
-
(2006)
Mol Syst Biol
, vol.2
, Issue.8
, pp. 20060008
-
-
Baba, T.1
-
51
-
-
0029065955
-
Gene disruption in Escherichia coli: TcR and KmR cassettes with the option of Flp-catalyzed excision of the antibiotic-resistance determinant
-
Cherepanov PP, Wackernagel W (1995) Gene disruption in Escherichia coli: TcR and KmR cassettes with the option of Flp-catalyzed excision of the antibiotic-resistance determinant. Gene 158(1):9-14.
-
(1995)
Gene
, vol.158
, Issue.1
, pp. 9-14
-
-
Cherepanov, P.P.1
Wackernagel, W.2
-
52
-
-
0002802808
-
Mutants of Escherichia coli requiring methionine or vitamin B12
-
Davis BD, Mingioli ES (1950) Mutants of Escherichia coli requiring methionine or vitamin B12. J Bacteriol 60(1):17-28.
-
(1950)
J Bacteriol
, vol.60
, Issue.1
, pp. 17-28
-
-
Davis, B.D.1
Mingioli, E.S.2
-
53
-
-
14244253233
-
Lipopolysaccharide transport to the bacterial outer membrane in spheroplasts
-
Tefsen B, Geurtsen J, Beckers F, Tommassen J, de Cock H (2005) Lipopolysaccharide transport to the bacterial outer membrane in spheroplasts. J Biol Chem 280(6): 4504-4509.
-
(2005)
J Biol Chem
, vol.280
, Issue.6
, pp. 4504-4509
-
-
Tefsen, B.1
Geurtsen, J.2
Beckers, F.3
Tommassen, J.4
De Cock, H.5
|