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Volumn 132, Issue 2, 2013, Pages 233-243

Exome-based linkage disequilibrium maps of individual genes: Functional clustering and relationship to disease

Author keywords

[No Author keywords available]

Indexed keywords

BMP2 INDUCIBLE KINASE; CELL DIVISION CYCLE 2 LIKE 5; CENTROSOMAL PROTEIN 192; DNA; DYNACTIN 4; INOSITOL HEXAKISPHOSPHATE KINASE 1; KINESIN FAMILY MEMBER 14; KINESIN FAMILY MEMBER 18A; KINESIN FAMILY MEMBER 1B; KINESIN FAMILY MEMBER 27; PHOSPHATIDYLINOSITOL 4 KINASE ALPHA; PROTEIN; SECRETORY CARRIER MEMBRANE PROTEIN 1; SPIRE HOMOLOGUE 1; SYNTAXIN 18; UNCLASSIFIED DRUG;

EID: 84874784836     PISSN: 03406717     EISSN: 14321203     Source Type: Journal    
DOI: 10.1007/s00439-012-1243-6     Document Type: Article
Times cited : (14)

References (26)
  • 3
    • 19344378811 scopus 로고    scopus 로고
    • Functional bias and spatial organization of genes in mutational hot and cold regions of the human genome
    • 10.1371/journal.pbio.0020029 1:CAS:528:DC%2BD2cXhsFCitrg%3D
    • Chuang JH, Li H (2004) Functional bias and spatial organization of genes in mutational hot and cold regions of the human genome. PLoS Biol 2(2):253-263
    • (2004) PLoS Biol , vol.2 , Issue.2 , pp. 253-263
    • Chuang, J.H.1    Li, H.2
  • 4
    • 0034791035 scopus 로고    scopus 로고
    • High-resolution haplotype structure in the human genome
    • 11586305 10.1038/ng1001-229 1:CAS:528:DC%2BD3MXnsFKns78%3D
    • Daly MJ, Rioux JD, Schaffner SF, Hudson TJ, Lander ES (2001) High-resolution haplotype structure in the human genome. Nat Genet 29:229-232
    • (2001) Nat Genet , vol.29 , pp. 229-232
    • Daly, M.J.1    Rioux, J.D.2    Schaffner, S.F.3    Hudson, T.J.4    Lander, E.S.5
  • 5
    • 0031466304 scopus 로고    scopus 로고
    • Microtubule polymerization dynamics
    • 9442869 10.1146/annurev.cellbio.13.1.83 1:CAS:528:DyaK1cXisFSksg%3D%3D
    • Desai A, Mitchison TJ (1997) Microtubule polymerization dynamics. Annu Rev Cell Dev Biol 13:83-117
    • (1997) Annu Rev Cell Dev Biol , vol.13 , pp. 83-117
    • Desai, A.1    Mitchison, T.J.2
  • 6
    • 80855134313 scopus 로고    scopus 로고
    • Defining the role of essential genes in human disease
    • 10.1371/journal.pone.0027368
    • Dickerson JE, Zhu A, Robertson DL, Hentges KE (2011) Defining the role of essential genes in human disease. PLoS ONE 6(11):e273368
    • (2011) PLoS ONE , vol.6 , Issue.11 , pp. 273368
    • Dickerson, J.E.1    Zhu, A.2    Robertson, D.L.3    Hentges, K.E.4
  • 10
    • 0034795550 scopus 로고    scopus 로고
    • Intensely punctate meiotic recombination in the class II region of the major histocompatibility complex
    • 11586303 10.1038/ng1001-217 1:CAS:528:DC%2BD3MXnsFKnsro%3D
    • Jeffreys AJ, Kauppi L, Neumann R (2001) Intensely punctate meiotic recombination in the class II region of the major histocompatibility complex. Nat Genet 29:217-222
    • (2001) Nat Genet , vol.29 , pp. 217-222
    • Jeffreys, A.J.1    Kauppi, L.2    Neumann, R.3
  • 11
    • 33847276228 scopus 로고    scopus 로고
    • Exploiting large scale computing to construct high resolution linkage disequilibrium maps of the human genome
    • 17142813 10.1093/bioinformatics/btl615 1:CAS:528:DC%2BD2sXhvFWlt7Y%3D
    • Lau W, Kuo T-Y, Tapper W, Cox S, Collins A (2007) Exploiting large scale computing to construct high resolution linkage disequilibrium maps of the human genome. Bioinformatics 23(4):517-519
    • (2007) Bioinformatics , vol.23 , Issue.4 , pp. 517-519
    • Lau, W.1    Kuo, T.-Y.2    Tapper, W.3    Cox, S.4    Collins, A.5
  • 12
    • 0036640951 scopus 로고    scopus 로고
    • Human SNP variability and mutation rate are higher in regions of high recombination
    • 12127766 10.1016/S0168-9525(02)02669-0 1:CAS:528:DC%2BD38XlsVOmu7k%3D
    • Lercher MJ, Hurst LD (2002) Human SNP variability and mutation rate are higher in regions of high recombination. Trends Genet 18:337-340
    • (2002) Trends Genet , vol.18 , pp. 337-340
    • Lercher, M.J.1    Hurst, L.D.2
  • 13
    • 84860147579 scopus 로고    scopus 로고
    • A comprehensive framework for prioritizing variants in exome sequencing studies of Mendelian diseases
    • 22241780 10.1093/nar/gkr1257 1:CAS:528:DC%2BC38Xls1Snu7s%3D
    • Li M-X, Gui H-S, Kwan JSH, Bao S-Y, Sham PC (2012) A comprehensive framework for prioritizing variants in exome sequencing studies of Mendelian diseases. Nucleic Acids Res 40(7):e53
    • (2012) Nucleic Acids Res , vol.40 , Issue.7 , pp. 53
    • Li, M.-X.1    Gui, H.-S.2    Kwan, J.S.H.3    Bao, S.-Y.4    Sham, P.C.5
  • 14
  • 15
    • 2142773942 scopus 로고    scopus 로고
    • The fine-scale structure of recombination rate variation in the human genome
    • 15105499 10.1126/science.1092500 1:CAS:528:DC%2BD2cXjt1Cku7c%3D
    • McVean GAT, Myers S, Hunt S, Deloukas P, Bentley DR, Donnelly P (2004) The fine-scale structure of recombination rate variation in the human genome. Science 304:581-584
    • (2004) Science , vol.304 , pp. 581-584
    • McVean, G.A.T.1    Myers, S.2    Hunt, S.3    Deloukas, P.4    Bentley, D.R.5    Donnelly, P.6
  • 17
    • 0036234455 scopus 로고    scopus 로고
    • Somatic hypermutation of immunoglobulin genes: Merging mechanisms for genetic diversity
    • 11983151 10.1016/S0092-8674(02)00706-7 1:CAS:528:DC%2BD38Xjt1eqtbg%3D
    • Papavasiliou FN, Schatz DG (2002) Somatic hypermutation of immunoglobulin genes: merging mechanisms for genetic diversity. Cell 109(Suppl):S35-S44
    • (2002) Cell , vol.109 , Issue.SUPPL.
    • Papavasiliou, F.N.1    Schatz, D.G.2
  • 20
    • 0032862870 scopus 로고    scopus 로고
    • Primate evolution of an olfactory receptor cluster: Diversification by gene conversion and recent emergence of pseudogenes
    • 10512677 10.1006/geno.1999.5900 1:CAS:528:DyaK1MXmtlCrsr8%3D
    • Sharon D, Glusman G, Pilpel Y, Khen M, Gruetzner F, Haaf T, Lancet D (1999) Primate evolution of an olfactory receptor cluster: diversification by gene conversion and recent emergence of pseudogenes. Genomics 61:24-36
    • (1999) Genomics , vol.61 , pp. 24-36
    • Sharon, D.1    Glusman, G.2    Pilpel, Y.3    Khen, M.4    Gruetzner, F.5    Haaf, T.6    Lancet, D.7
  • 21
    • 27544435335 scopus 로고    scopus 로고
    • Sequence features in regions of weak and strong linkage disequilibrium
    • 16251462 10.1101/gr.4421405 1:CAS:528:DC%2BD2MXhtF2itb7P
    • Smith AV, Thomas DJ, Munro HM, Abecasis GR (2005) Sequence features in regions of weak and strong linkage disequilibrium. Genome Res 15(11):1519-1534
    • (2005) Genome Res , vol.15 , Issue.11 , pp. 1519-1534
    • Smith, A.V.1    Thomas, D.J.2    Munro, H.M.3    Abecasis, G.R.4
  • 22
    • 80052968197 scopus 로고    scopus 로고
    • Assessing the patterns of linkage disequilibrium in genic regions of the human genome
    • 21824289 10.1111/j.1742-4658.2011.08293.x 1:CAS:528:DC%2BC3MXht1Ons7bE
    • Sun P, Zhang R, Jiang Y, Wang X, Li J, Lv H, Tang G, Guo X, Meng X, Zhang H, Zhang R (2011) Assessing the patterns of linkage disequilibrium in genic regions of the human genome. FEBS J 278(19):3748-3755
    • (2011) FEBS J , vol.278 , Issue.19 , pp. 3748-3755
    • Sun, P.1    Zhang, R.2    Jiang, Y.3    Wang, X.4    Li, J.5    Lv, H.6    Tang, G.7    Guo, X.8    Meng, X.9    Zhang, H.10    Zhang, R.11
  • 23
    • 23844437267 scopus 로고    scopus 로고
    • A map of the human genome in linkage disequilibrium units
    • 16091463 10.1073/pnas.0505262102 1:CAS:528:DC%2BD2MXpsFGgtbs%3D
    • Tapper W, Collins A, Gibson J, Maniatis N, Ennis S, Morton NE (2005) A map of the human genome in linkage disequilibrium units. Proc Natl Acad Sci USA 102(33):11835-11839
    • (2005) Proc Natl Acad Sci USA , vol.102 , Issue.33 , pp. 11835-11839
    • Tapper, W.1    Collins, A.2    Gibson, J.3    Maniatis, N.4    Ennis, S.5    Morton, N.E.6
  • 24
    • 79959503826 scopus 로고    scopus 로고
    • The International HapMap Project
    • The International HapMap Consortium 10.1038/nature02168
    • The International HapMap Consortium (2003) The International HapMap Project. Nature 426:789-796
    • (2003) Nature , vol.426 , pp. 789-796
  • 25
    • 61449172037 scopus 로고    scopus 로고
    • Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources
    • Wei Haung D, Sherman BT, Lempicki RA (2009) Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources. Nat Protoc 4:44-57
    • (2009) Nat Protoc , vol.4 , pp. 44-57
    • Wei Haung, D.1    Sherman, B.T.2    Lempicki, R.A.3
  • 26
    • 0037168588 scopus 로고    scopus 로고
    • Properties of linkage disequilibrium (LD) maps
    • 12486239 10.1073/pnas.012672899 1:CAS:528:DC%2BD3sXhvV2lsQ%3D%3D
    • Zhang W, Collins A, Maniatis N, Tapper W, Morton NE (2002) Properties of linkage disequilibrium (LD) maps. Proc Natl Acad Sci USA 99(26):17004-17007
    • (2002) Proc Natl Acad Sci USA , vol.99 , Issue.26 , pp. 17004-17007
    • Zhang, W.1    Collins, A.2    Maniatis, N.3    Tapper, W.4    Morton, N.E.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.