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Volumn 278, Issue 19, 2011, Pages 3748-3755

Assessing the patterns of linkage disequilibrium in genic regions of the human genome

Author keywords

haplotype block; human evolution; linkage disequilibrium; population genetics; single nucleotide polymorphisms

Indexed keywords

3' UNTRANSLATED REGION; 5' UNTRANSLATED REGION; ARTICLE; CELL CYCLE REGULATION; CONTROLLED STUDY; DEVELOPMENTAL STAGE; GENE CLUSTER; GENE FUNCTION; GENE LINKAGE DISEQUILIBRIUM; GENE LOCATION; GENE STRUCTURE; GENETIC ASSOCIATION; GENETIC CODE; GENETIC DIFFERENCE; GENETIC VARIABILITY; GENOME ANALYSIS; HAPLOTYPE MAP; HUMAN; HUMAN GENOME; IMMUNOREGULATION; ION TRANSPORT; MACROMOLECULE; METABOLIC REGULATION; MOLECULAR EVOLUTION; PRIORITY JOURNAL; SINGLE NUCLEOTIDE POLYMORPHISM;

EID: 80052968197     PISSN: 1742464X     EISSN: 17424658     Source Type: Journal    
DOI: 10.1111/j.1742-4658.2011.08293.x     Document Type: Article
Times cited : (12)

References (29)
  • 1
    • 0042387813 scopus 로고    scopus 로고
    • Assessing the performance of the haplotype block model of linkage disequilibrium
    • DOI 10.1086/378099
    • Wall JD, &, Pritchard JK, (2003) Assessing the performance of the haplotype block model of linkage disequilibrium. Am J Hum Genet 73, 502-515. (Pubitemid 37076265)
    • (2003) American Journal of Human Genetics , vol.73 , Issue.3 , pp. 502-515
    • Wall, J.D.1    Pritchard, J.K.2
  • 4
    • 33746585377 scopus 로고    scopus 로고
    • Possible ancestral structure in human populations
    • Plagnol V, &, Wall JD, (2006) Possible ancestral structure in human populations. PLoS Genet 2, e105.
    • (2006) PLoS Genet , vol.2
    • Plagnol, V.1    Wall, J.D.2
  • 8
    • 27544435335 scopus 로고    scopus 로고
    • Sequence features in regions of weak and strong linkage disequilibrium
    • DOI 10.1101/gr.4421405
    • Smith AV, Thomas DJ, Munro HM, &, Abecasis GR, (2005) Sequence features in regions of weak and strong linkage disequilibrium. Genome Res 15, 1519-1534. (Pubitemid 41545006)
    • (2005) Genome Research , vol.15 , Issue.11 , pp. 1519-1534
    • Smith, A.V.1    Thomas, D.J.2    Munro, H.M.3    Abecasis, G.R.4
  • 10
    • 0043267974 scopus 로고    scopus 로고
    • Haplotype blocks and linkage disequilibrium in the human genome
    • DOI 10.1038/nrg1123
    • Wall JD, &, Pritchard JK, (2003) Haplotype blocks and linkage disequilibrium in the human genome. Nat Rev Genet 4, 587-597. (Pubitemid 36917501)
    • (2003) Nature Reviews Genetics , vol.4 , Issue.8 , pp. 587-597
    • Wall, J.D.1    Pritchard, J.K.2
  • 12
    • 33750444621 scopus 로고    scopus 로고
    • A worldwide survey of haplotype variation and linkage disequilibrium in the human genome
    • DOI 10.1038/ng1911, PII NG1911
    • Conrad DF, Jakobsson M, Coop G, Wen X, Wall JD, Rosenberg NA, &, Pritchard JK, (2006) A worldwide survey of haplotype variation and linkage disequilibrium in the human genome. Nat Genet 38, 1251-1260. (Pubitemid 44646287)
    • (2006) Nature Genetics , vol.38 , Issue.11 , pp. 1251-1260
    • Conrad, D.F.1    Jakobsson, M.2    Coop, G.3    Wen, X.4    Wall, J.D.5    Rosenberg, N.A.6    Pritchard, J.K.7
  • 13
    • 34848886528 scopus 로고    scopus 로고
    • Enrichment of HapMap recombination hotspot predictions around human nervous system genes: Evidence for positive selection?
    • DOI 10.1038/sj.ejhg.5201876, PII 5201876
    • Freudenberg J, Fu YH, &, Ptacek LJ, (2007) Enrichment of HapMap recombination hotspot predictions around human nervous system genes: evidence for positive selection? Eur J Hum Genet 15, 1071-1078, doi:. (Pubitemid 47500012)
    • (2007) European Journal of Human Genetics , vol.15 , Issue.10 , pp. 1071-1078
    • Freudenberg, J.1    Fu, Y.-H.2    Ptacek, L.J.3
  • 14
    • 79959524146 scopus 로고    scopus 로고
    • A haplotype map of the human genome
    • doi
    • Consortium TIH, (2005) A haplotype map of the human genome. Nature 437, 1299-1320, doi:.
    • (2005) Nature , vol.437 , pp. 1299-1320
    • Consortium, T.I.H.1
  • 16
    • 0034795550 scopus 로고    scopus 로고
    • Intensely punctate meiotic recombination in the class II region of the major histocompatibility complex
    • DOI 10.1038/ng1001-217
    • Jeffreys AJ, Kauppi L, &, Neumann R, (2001) Intensely punctate meiotic recombination in the class II region of the major histocompatibility complex. Nat Genet 29, 217-222. (Pubitemid 32952662)
    • (2001) Nature Genetics , vol.29 , Issue.2 , pp. 217-222
    • Jeffreys, A.J.1    Kauppi, L.2    Neumann, R.3
  • 18
    • 70949106022 scopus 로고    scopus 로고
    • Haploview: Visualization and analysis of SNP genotype data
    • pdb.ip71
    • Barrett JC, (2009) Haploview: visualization and analysis of SNP genotype data. Cold Spring Harb Protoc 2009, pdb.ip71.
    • (2009) Cold Spring Harb Protoc 2009
    • Barrett, J.C.1
  • 21
    • 33748525883 scopus 로고    scopus 로고
    • Enzyme promiscuity: Evolutionary and mechanistic aspects
    • DOI 10.1016/j.cbpa.2006.08.011, PII S1367593106001189, Analytical Techniques/Mechanisms
    • Khersonsky O, Roodveldt C, &, Tawfik DS, (2006) Enzyme promiscuity: evolutionary and mechanistic aspects. Curr Opin Chem Biol 10, 498-508. (Pubitemid 44375065)
    • (2006) Current Opinion in Chemical Biology , vol.10 , Issue.5 , pp. 498-508
    • Khersonsky, O.1    Roodveldt, C.2    Tawfik, D.S.3
  • 23
    • 39749136249 scopus 로고    scopus 로고
    • Rapid parasite adaptation drives selection for high recombination rates
    • DOI 10.1111/j.1558-5646.2007.00265.x
    • Salathe M, Kouyos RD, Regoes RR, &, Bonhoeffer S, (2008) Rapid parasite adaptation drives selection for high recombination rates. Evolution 62, 295-300. (Pubitemid 351294550)
    • (2008) Evolution , vol.62 , Issue.2 , pp. 295-300
    • Salathe, M.1    Kouyos, R.D.2    Regoes, R.R.3    Bonhoeffer, S.4
  • 24
    • 50949112957 scopus 로고    scopus 로고
    • Clustering of Drosophila melanogaster immune genes in interplay with recombination rate
    • Wegner KM, (2008) Clustering of Drosophila melanogaster immune genes in interplay with recombination rate. PLoS ONE 3, e2835.
    • (2008) PLoS ONE , vol.3
    • Wegner, K.M.1
  • 25
    • 42649111672 scopus 로고    scopus 로고
    • Evaluation of coverage variation of SNP chips for genome-wide association studies
    • DOI 10.1038/sj.ejhg.5202007, PII 5202007
    • Li M, Li C, &, Guan W, (2008) Evaluation of coverage variation of SNP chips for genome-wide association studies. Eur J Hum Genet 16, 635-643. (Pubitemid 351594131)
    • (2008) European Journal of Human Genetics , vol.16 , Issue.5 , pp. 635-643
    • Li, M.1    Li, C.2    Guan, W.3
  • 26
    • 72849122933 scopus 로고    scopus 로고
    • From evolutionary genetics to human immunology: How selection shapes host defence genes
    • Barreiro LB, &, Quintana-Murci L, (2010) From evolutionary genetics to human immunology: how selection shapes host defence genes. Nat Rev Genet 11, 17-30.
    • (2010) Nat Rev Genet , vol.11 , pp. 17-30
    • Barreiro, L.B.1    Quintana-Murci, L.2
  • 29
    • 0023375195 scopus 로고
    • The neighbor-joining method: A new method for reconstructing phylogenetic trees
    • Saitou N, &, Nei M, (1987) The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4, 406-425.
    • (1987) Mol Biol Evol , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.