-
1
-
-
0028986487
-
Targeting HIV-1 protease: A test of drugdesign methodologies
-
West ML, Fairlie DP. Targeting HIV-1 protease: A test of drugdesign methodologies. Trends Pharmacol Sci 1995;16:67-75
-
(1995)
Trends Pharmacol Sci
, vol.16
, pp. 67-75
-
-
West, M.L.1
Fairlie, D.P.2
-
2
-
-
35348992176
-
Protease inhibitor resistance in HIV-infected patients: Molecular and clinical perspectives
-
DOI 10.1016/j.antiviral.2007.06.010, PII S016635420700366X
-
Martinez-Cajas JL, Wainberg MA. Protease inhibitor resistance in HIV-infected patients: Molecular and clinical perspectives. Antiviral Res 2007;76:203-221 (Pubitemid 47603256)
-
(2007)
Antiviral Research
, vol.76
, Issue.3
, pp. 203-221
-
-
Martinez-Cajas, J.L.1
Wainberg, M.A.2
-
3
-
-
0028843163
-
Characterization of human immunodeficiency virus type 1 mutants with decreased sensitivity to proteinase inhibitor Ro 31-8959
-
Jacobsen H, Yasargil K, Winslow DL, Craig JC, Kröhn A, Duncan IB et al. Characterization of human immunodeficiency virus type 1 mutants with decreased sensitivity to proteinase inhibitor Ro 31-8959. Virology 1995;206:527-534
-
(1995)
Virology
, vol.206
, pp. 527-534
-
-
Jacobsen, H.1
Yasargil, K.2
Winslow, D.L.3
Craig, J.C.4
Kröhn, A.5
Duncan, I.B.6
-
4
-
-
33846844941
-
Discovery of small-molecule HIV-1 fusion and integrase inhibitors oleuropein and hydroxytyrosol: Part I. Integrase inhibition
-
DOI 10.1016/j.bbrc.2007.01.071, PII S0006291X07000812
-
Sylvia L-H, Huang PL, Dawei Z, Wook LJ, Ju B, Yongtao S et al. Discovery of small-molecule HIV-1 fusion and integrase inhibitors oleuropein and hydroxytyrosol: Part I. Integrase inhibition. Biochem Biophys Res Commun 2007;354:872-878 (Pubitemid 46216214)
-
(2007)
Biochemical and Biophysical Research Communications
, vol.354
, Issue.4
, pp. 872-878
-
-
Lee-Huang, S.1
Huang, P.L.2
Zhang, D.3
Lee, J.W.4
Bao, J.5
Sun, Y.6
Chang, Y.-T.7
Zhang, J.8
Huang, P.L.9
-
5
-
-
26844579306
-
Management of newly diagnosed HIV infection
-
DOI 10.1056/NEJMcp051203
-
Hammer SM. Clinical practice. Management of newly diagnosed HIV infection. N Engl J Med 2005;353:1702-1710 (Pubitemid 41464709)
-
(2005)
New England Journal of Medicine
, vol.353
, Issue.16
, pp. 1702-1710
-
-
Hammer, S.M.1
-
6
-
-
0242351943
-
Protease inhibition in African subtypes of HIV-1
-
Velázquez-Campoy A, Vega S, Fleming E, Bacha U, Sayed Y, Dirr HW et al. Protease inhibition in African subtypes of HIV-1. AIDS Rev 2003;5:165-171 (Pubitemid 37336633)
-
(2003)
AIDS Reviews
, vol.5
, Issue.3
, pp. 165-171
-
-
Velazquez-Campoy, A.1
Vega, S.2
Fleming, E.3
Bacha, U.4
Sayed, Y.5
Dirr, H.W.6
Freire, E.7
-
7
-
-
3042819327
-
Interconvertions between δ-lactam and δ-lactone derivatives initiated by unique transannular interactions of the rigid cyclohexane boat structure in pentacycloundecane
-
DOI 10.1021/jo0357723
-
Kruger HG, Martins FJ, Viljoen AM. Interconvertions between delta-lactam and delta-lactone derivatives initiated by unique transannular interactions of the rigid cyclohexane boat structure in pentacycloundecane. J Org Chem 2004;69:4863-4866 (Pubitemid 38890662)
-
(2004)
Journal of Organic Chemistry
, vol.69
, Issue.14
, pp. 4863-4866
-
-
Kruger, H.G.1
Martins, F.J.C.2
Viljoen, A.M.3
-
8
-
-
0028070092
-
Synthesis of δ-Lactams from
-
Martins FJC, Viljoen AM, Kruger HG, Joubert JA, Wessels PL. Synthesis of δ-Lactams from. Tetrahedron 1994;50: 10783-10790
-
(1994)
Tetrahedron
, vol.50
, pp. 10783-10790
-
-
Martins, F.J.C.1
Viljoen, A.M.2
Kruger, H.G.3
Joubert, J.A.4
Wessels, P.L.5
-
9
-
-
1242301105
-
5,9]undecane-8,11-carbolactam
-
Kruger HG, Martins FJC, Viljoen AM, Boeyens JCA, Cook LM, Levendis DC. Structure and conformation of the hydrate of 8,11-dihydroxypentacyclo[5.4.0.02, 6.03,10.05,9]undecane-8,11-carbolactam. Acta Crystallogr 1996;52:838-841 (Pubitemid 126417495)
-
(1996)
Acta Crystallographica Section B: Structural Science
, vol.52
, Issue.5
, pp. 838-841
-
-
Kruger, H.G.1
Martins, F.J.C.2
Viljoen, A.M.3
Boeyens, J.C.A.4
Cook, L.M.5
Levendis, D.C.6
-
10
-
-
34548390625
-
8-Amino-11-hydroxypentacycloundecane-8,11-lactam
-
Boyle GA, Govender T, Kruger HG, Ndlovu IN. 8-Amino-11- hydroxypentacycloundecane-8,11-lactam. Acta Crystallogr 2007;63: O3906-U3914
-
(2007)
Acta Crystallogr
, vol.63
-
-
Boyle, G.A.1
Govender, T.2
Kruger, H.G.3
Ndlovu, I.N.4
-
11
-
-
80052919213
-
Synthesis and structural studies of pentacycloundecane-based HIV-1 PR inhibitors: A hybrid 2D NMR and docking/QM/MM/MD approach
-
Makatini MM, Petzold K, Sriharsha SN, Ndlovu N, Soliman ME, Honarparvar B et al. Synthesis and structural studies of pentacycloundecane-based HIV-1 PR inhibitors: A hybrid 2D NMR and docking/QM/MM/MD approach. Eur J Med Chem 2011;46:3976-3985
-
(2011)
Eur J Med Chem
, Issue.46
, pp. 3976-3985
-
-
Makatini, M.M.1
Petzold, K.2
Sriharsha, S.N.3
Ndlovu, N.4
Soliman, M.E.5
Honarparvar, B.6
-
12
-
-
79953271039
-
Pentacycloundecane-based inhibitors of wild-type C-South African HIV-protease
-
Makatini MM, Petzold K, Sriharsha SN, Soliman ME, Honarparvar B, Arvidsson PI et al. Pentacycloundecane-based inhibitors of wild-type C-South African HIV-protease. Bioorg Med Chem Lett 2011;21:2274-2277
-
(2011)
Bioorg Med Chem Lett
, Issue.21
, pp. 2274-2277
-
-
Makatini, M.M.1
Petzold, K.2
Sriharsha, S.N.3
Soliman, M.E.4
Honarparvar, B.5
Arvidsson, P.I.6
-
13
-
-
34547594517
-
Synthesis of novel highly functionalized biologically active polycyclic caged amides
-
DOI 10.1016/j.tetlet.2007.06.125, PII S0040403907012415
-
James B, Viji S, Mathew S, Nair MS, Lakshmanan D, Kumar RA. Synthesis of novel highly functionalized biologically active polycyclic caged amides. Tetrahedron Lett 2007:48:6204-6208 (Pubitemid 47189589)
-
(2007)
Tetrahedron Letters
, vol.48
, Issue.35
, pp. 6204-6208
-
-
James, B.1
Viji, S.2
Mathew, S.3
Nair, M.S.4
Lakshmanan, D.5
Ajay Kumar, R.6
-
14
-
-
10344221023
-
Pharmacology and structure-activity relationships of bioactive polycyclic cage compounds: A focus on pentacycloundecane derivatives
-
DOI 10.1002/med.20013
-
Geldenhuys WJ, Malan SF, Bloomquist JR, Marchand AP, Van der Schyf CJ. Pharmacology and structure-activity relationships of bioactive polycyclic cage compounds: A focus on pentacycloundecane derivatives. Med Res Rev 2005;25:21-48 (Pubitemid 39628525)
-
(2005)
Medicinal Research Reviews
, vol.25
, Issue.1
, pp. 21-48
-
-
Geldenhuys, W.J.1
Malan, S.F.2
Bloomquist, J.R.3
Marchand, A.P.4
Van Der Schyf, C.J.5
-
15
-
-
52949122923
-
Medicinal chemistry of polycyclic cage compounds in drug discovery research
-
Oliver DW, Malan SF. Medicinal chemistry of polycyclic cage compounds in drug discovery research. Med Chem Res 2008;17:137-151
-
(2008)
Med Chem Res
, vol.17
, pp. 137-151
-
-
Oliver, D.W.1
Malan, S.F.2
-
17
-
-
32644445410
-
A theoretical study of pentacyclo-undecane cage peptides of the type (Ac-X-Y-NHMe)
-
DOI 10.1002/psc.692
-
Bisetty K, Corcho FJ, Canto J, Kruger HG, Perez JJ. A theoretical study of pentacyclo-undecane cage peptides of the type [Ac-X-YNHMe]. J Pept Sci 2006;12:92-105 (Pubitemid 43239217)
-
(2006)
Journal of Peptide Science
, vol.12
, Issue.2
, pp. 92-105
-
-
Bisetty, K.1
Corcho, F.J.2
Canto, J.3
Kruger, H.G.4
Perez, J.J.5
-
18
-
-
33847765818
-
Synthesis and biological evaluation of rigid polycyclic derivatives of the Diels-Alder adduct tricyclo[6.2.1.02,7]undeca-4,9-dien-3,6-dione
-
Ito T, Ando H, Suzuki T, Ogura T, Hotta K, Imamura Y et al. Synthesis and biological evaluation of rigid polycyclic derivatives of the Diels-Alder adduct tricyclo[6.2.1.02,7]undeca-4,9-dien-3,6-dione. Science 2010;327:271-282
-
(2010)
Science
, Issue.327
, pp. 271-282
-
-
Ito, T.1
Ando, H.2
Suzuki, T.3
Ogura, T.4
Hotta, K.5
Imamura, Y.6
-
19
-
-
0017623247
-
Biological active polycycloalkanes 4. Phosphoric esters of trimethylenenorbornyl alcohols
-
Inamoto Y, Aigami K, Kadono T, Nakayama H, takatsuki A, Tamura G. Biological active polycycloalkanes. 4. Phosphoric esters of trimethylenenorbornyl alcohols. J Med Chem 1977;20:1371-1374
-
(1977)
J Med Chem
, vol.20
, pp. 1371-1374
-
-
Inamoto, Y.1
Aigami, K.2
Kadono, T.3
Nakayama H4
Takatsuki, A.5
Tamura, G.6
-
20
-
-
0017084236
-
Biologically active polycycloalkanes 2 Antiviral 4-homoisotwistane derivatives
-
Aigami K, Inamoto Y, Takaishi N, Fujikura Y. Biologically active polycycloalkanes. 2. Antiviral 4-homoisotwistane derivatives. J Med Chem 1976;19:536-540
-
(1976)
J Med Chem
, Issue.19
, pp. 536-540
-
-
Aigami, K.1
Inamoto, Y.2
Takaishi, N.3
Fujikura, Y.4
-
21
-
-
0036257686
-
Converting a peptide into a drug: Strategies to improve stability and bioavailability
-
Adessi C, Soto C. Converting a peptide into a drug: Strategies to improve stability and bioavailability. Curr Med Chem 2002;9:963-978 (Pubitemid 34498572)
-
(2002)
Current Medicinal Chemistry
, vol.9
, Issue.9
, pp. 963-978
-
-
Adessi, C.1
Soto, C.2
-
22
-
-
0033851469
-
Conformational and topographical considerations in designing agonist peptidomimetics from peptide leads
-
Hruby VJ, Balse PM. Conformational and topographical considerations in designing agonist peptidomimetics from peptide leads. Curr Med Chem 2000;7:945-970
-
(2000)
Curr Med Chem
, vol.7
, pp. 945-970
-
-
Hruby, V.J.1
Balse, P.M.2
-
23
-
-
0028033882
-
Proteolytic studies of homologous peptide and N-substituted glycine peptoid oligomers
-
DOI 10.1016/S0960-894X(01)80691-0
-
Miller, SM, Simon RJ, Ng S, Zuckermann RN, Kerr JM, Moos WH. Proteolytic studies of homologous peptide and n-substituted glycine peptoid oligomers. Bioorg Med Chem Lett 1994;4:2657-2662 (Pubitemid 24352734)
-
(1994)
Bioorganic and Medicinal Chemistry Letters
, vol.4
, Issue.22
, pp. 2657-2662
-
-
Miller, S.M.1
Simon, R.J.2
Ng, S.3
Zuckermann, R.N.4
Kerr, J.M.5
Moos, W.H.6
-
24
-
-
0000908874
-
Efficient method for the preparation of peptoids [oligo(N-substituted glycines)] by submonomer solid phase synthesis
-
Zuckermann RN, Kerr JM., Kent, SBH, Moos WH. Efficient method for the preparation of peptoids [oligo(N-substituted glycines)] by submonomer solid phase synthesis. J Am Chem Soc 1992;114:10646-10647
-
(1992)
J Am Chem Soc
, vol.114
, pp. 10646-10647
-
-
Zuckermann, R.N.1
Kerr, J.M.2
Kent, S.B.H.3
Moos, W.H.4
-
25
-
-
0029059507
-
Comparison of the proteolytic susceptibilities of homologous L-amino Acid D-amino Acid, and N-substituted glycine peptide and peptoid oligomers
-
Miller SM, Simon RJ, Ng S, Zuckermann RN, Kerr JM, Moos WH. Comparison of the proteolytic susceptibilities of homologous L-amino Acid, D-amino Acid, and N-substituted glycine peptide and peptoid oligomers. Drug Dev Res 1995;35:20-32
-
(1995)
Drug Dev Res
, vol.35
, pp. 20-32
-
-
Miller, S.M.1
Simon, R.J.2
Ng, S.3
Zuckermann, R.N.4
Kerr, J.M.5
Moos, W.H.6
-
26
-
-
33644990973
-
Pentacyclo[5.4.0.0-2 6.03 10059]undecane-811-dione ethylene acetal
-
Kruger HG, Rademeyer M, Ramdhani R. Pentacyclo[5.4.0.0-2,6.03,10.05,9] undecane-8,11-dione ethylene acetal. Acta Crystallogr Sect E Struct Rep Online 2006;62:268-270
-
(2006)
Acta Crystallogr Sect E Struct Rep Online
, vol.62
, pp. 268-270
-
-
Kruger, H.G.1
Rademeyer, M.2
Ramdhani, R.3
-
27
-
-
33646383073
-
Analysis of HIV-1 CRF-01 A/E protease inhibitor resistance: Structural determinants for maintaining sensitivity and developing resistance to atazanavir
-
Clemente JC, Coman RM, Thiaville MM, Janka LK, Jeung JA, Nukoolkarn S et al. Analysis of HIV-1 CRF-01 A/E protease inhibitor resistance: Structural determinants for maintaining sensitivity and developing resistance to atazanavir. Biochemistry 2006;45:5468-5477
-
(2006)
Biochemistry
, vol.45
, pp. 5468-5477
-
-
Clemente, J.C.1
Coman, R.M.2
Thiaville, M.M.3
Janka, L.K.4
Jeung, J.A.5
Nukoolkarn, S.6
-
28
-
-
0031804609
-
Inhibitors of HIV-1 protease: A major success of structure-assisted drug design
-
DOI 10.1146/annurev.biophys.27.1.249
-
Wlodawer A, Vondrasek J. Inhibitors of HIV-1 protease: A major success of structure-assisted drug design. Annu Rev Biophys Biomol Struct 1998;27:249-284 (Pubitemid 28286016)
-
(1998)
Annual Review of Biophysics and Biomolecular Structure
, vol.27
, pp. 249-284
-
-
Wlodawer, A.1
Vondrasek, J.2
-
29
-
-
0034611591
-
Conformational selection of inhibitors and substrates by proteolytic enzymes: Implications for drug design and polypeptide processing
-
DOI 10.1021/jm990315t
-
Fairlie DP, Tyndall JD, Reid RC, Wong AK, Abbenante G, Scanlon MJ et al. Conformational selection of inhibitors and substrates by proteolytic enzymes: Implications for drug design and polypeptide processing. J Med Chem 2000;43:1271-1281 (Pubitemid 30212569)
-
(2000)
Journal of Medicinal Chemistry
, vol.43
, Issue.7
, pp. 1271-1281
-
-
Fairlie, D.P.1
Tyndall, J.D.A.2
Reid, R.C.3
Wong, A.K.4
Abbenante, G.5
Scanlon, M.J.6
March, D.R.7
Bergman, D.A.8
Chai, C.L.L.9
Burkett, B.A.10
-
30
-
-
39749165062
-
Two-carbon-elongated HIV-1 protease inhibitors with a tertiary-alcohol- containing transition-state mimic
-
DOI 10.1021/jm070680h
-
Wu XY, Oehrngren P, Ekegren JK, Unge J, Unge T, Wallberg H et al. Two-carbon-elongated HIV-1 protease inhibitors with a tertiary-alcohol- containing transition-state mimic. J Med Chem 2008;51:1053-1057 (Pubitemid 351304714)
-
(2008)
Journal of Medicinal Chemistry
, vol.51
, Issue.4
, pp. 1053-1057
-
-
Wu, X.1
Ohrngren, P.2
Ekegren, J.K.3
Unge, J.4
Unge, T.5
Wallberg, H.6
Samuelsson, B.7
Hallberg, A.8
Larhed, M.9
-
31
-
-
0028968902
-
ABT-538 is a potent inhibitor of human immunodeficiency virus protease and has high oral bioavailability in humans
-
Kempf DJ, Marsh KC, Denissen JF, McDonald E, Vasavanonda S, Flentge CA et al. ABT-538 is a potent inhibitor of human immunodeficiency virus protease and has high oral bioavailability in humans. Proc Natl Acad Sci USA 1995;92:2484-2488
-
(1995)
Proc Natl Acad Sci USA
, vol.92
, pp. 2484-2488
-
-
Kempf, D.J.1
Marsh, K.C.2
Denissen, J.F.3
McDonald, E.4
Vasavanonda, S.5
Flentge, C.A.6
-
32
-
-
0029939026
-
Human immunodeficiency virus, type 1 protease substrate specificity is limited by interactions between substrate amino acids bound in adjacent enzyme subsites
-
DOI 10.1074/jbc.271.9.4709
-
Ridky TW, Cameron CE, Cameron J, Leis J, Copeland T, Wlodawer A et al. Human immunodeficiency virus, type 1 protease substrate specificity is limited by interactions between substrate amino acids bound in adjacent enzyme subsites. J Biol Chem 1996;271:4709-4717 (Pubitemid 26074952)
-
(1996)
Journal of Biological Chemistry
, vol.271
, Issue.9
, pp. 4709-4717
-
-
Ridky, T.W.1
Cameron, C.E.2
Cameron, J.3
Leis, J.4
Copeland, T.5
Wlodawer, A.6
Weber, I.T.7
Harrison, R.W.8
-
33
-
-
58449119649
-
Reliable crosspeak integration in adiabatic symmetrized ROESY
-
EASY ROESY
-
Thiele CM, Petzold K, Schleucher J. EASY ROESY: Reliable crosspeak integration in adiabatic symmetrized ROESY. Chemistry 2009;15:585-588
-
(2009)
Chemistry
, vol.15
, pp. 585-588
-
-
Thiele, C.M.1
Petzold, K.2
Schleucher, J.3
-
34
-
-
55549131523
-
Active-site mutations in the South African human immunodeficiency virus type 1 subtype C protease have a significant impact on clinical inhibitor binding: Kinetic and thermodynamic study
-
Mosebi S, Morris L, Dirr HW, Sayed Y. Active-site mutations in the South African human immunodeficiency virus type 1 subtype C protease have a significant impact on clinical inhibitor binding: Kinetic and thermodynamic study. J Virol 2008;82:11476-11479
-
(2008)
J Virol
, vol.82
, pp. 11476-11479
-
-
Mosebi, S.1
Morris, L.2
Dirr, H.W.3
Sayed, Y.4
-
35
-
-
0037203970
-
Identification of potent and selective mechanism-based inhibitors of the cysteine protease cruzain using solid-phase parallel synthesis
-
DOI 10.1021/jm010333m
-
Huang, L, Lee A, Ellman JA. Identification of potent and selective mechanism-based inhibitors of the cysteine protease cruzain using solid-phase parallel synthesis pages. J Med Chem 2002;45:676-684 (Pubitemid 34145714)
-
(2002)
Journal of Medicinal Chemistry
, vol.45
, Issue.3
, pp. 676-684
-
-
Huang, L.1
Lee, A.2
Ellman, J.A.3
-
36
-
-
64149103140
-
Structure-function relationships in peptoids: Recent advances toward deciphering the structural requirements for biological function
-
Fowler SA, Blackwell HE. Structure-function relationships in peptoids: Recent advances toward deciphering the structural requirements for biological function. Org Biomol Chem 2009;7:1508-1524
-
(2009)
Org Biomol Chem
, vol.7
, pp. 1508-1524
-
-
Fowler, S.A.1
Blackwell, H.E.2
-
37
-
-
0017124029
-
Folding and stability of helical proteins: Carp myogen
-
Warshel A, Levitt M. Folding and stability of helical proteins: Carp myogen. J Mol Biol 1976;106:421-437
-
(1976)
J Mol Biol
, vol.106
, pp. 421-437
-
-
Warshel, A.1
Levitt, M.2
-
38
-
-
84874127758
-
-
Avogadro. Version 1.0.0. Availabe At
-
Avogadro. Version 1.0.0. Availabe at: Http://avogadro. openmolecules.net
-
-
-
-
39
-
-
0004016501
-
Comparison of Simple Potential Function for Simulating Liquid Water pages
-
Jorgensen WL, Chandrasekhar J, Madura JD, Impey RW, Klein ML. Comparison of Simple Potential Function for Simulating Liquid Water pages. J Chem Phys 1983;79:926-935
-
(1983)
J Chem Phys
, vol.79
, pp. 926-935
-
-
Jorgensen, W.L.1
Chandrasekhar, J.2
Madura, J.D.3
Impey, R.W.4
Klein, M.L.5
-
40
-
-
0000831054
-
The dynamo library for molecular simulations using hybrid quantum mechanical and molecular mechanical potentials
-
Field MJ, Albe M, Bret C, Proust-De Martin F, Thomas A. The dynamo library for molecular simulations using hybrid quantum mechanical and molecular mechanical potentials. J Comp Chem 2000;21:1088-1100
-
(2000)
J Comp Chem
, vol.21
, pp. 1088-1100
-
-
Field, M.J.1
Albe, M.2
Bret, C.3
Proust-De Martin, F.4
Thomas, A.5
-
42
-
-
0035913529
-
Evaluation and reparametrization of the OPLS-AA force field for proteins via comparison with accurate quantum chemical calculations on peptides
-
DOI 10.1021/jp003919d
-
Kaminski GA, Friesner RA, Tirado-Rives J, Jorgensen WL. Evaluation and reparametrization of the OPLS-AA force field for proteins via comparison with accurate quantum chemical calculations on peptides. J Phys Chem B 2001;105: 6474-6487 (Pubitemid 35339015)
-
(2001)
Journal of Physical Chemistry B
, vol.105
, Issue.28
, pp. 6474-6487
-
-
Kaminski, G.A.1
Friesner, R.A.2
Tirado-Rives, J.3
Jorgensen, W.L.4
-
43
-
-
0032585948
-
The effect of increasing α1-acid glycoprotein concentration on the antiviral efficacy of human immunodeficiency virus protease inhibitors
-
Zhang XQ, Schooley RT, Gerber JG. The effect of increasing α1-acid glycoprotein concentration on the antiviral efficacy of human immunodeficiency virus protease inhibitors. J Infect Dis 1999;180:1833-1837
-
(1999)
J Infect Dis
, vol.180
, pp. 1833-1837
-
-
Zhang, X.Q.1
Schooley, R.T.2
Gerber, J.G.3
-
44
-
-
84855875382
-
Pentacycloundecane derived hydroxyl acid peptides: A new class of irreversible non-scissile bridged ether type isoster as potential hiv-1 wild type c-sa protease
-
In Press. Available at
-
Karpoormath R, Sayed Y, Govender P, Maguire GEM, Kruger HG, Govender T et al. Pentacycloundecane derived hydroxyl acid peptides: A new class of irreversible non-scissile bridged ether type isoster as potential HIV-1 wild type C-SA protease. Bioorgan Chem 2011. In Press. Available at: Http://dx.doi.org/10.1016/j. bioorg.2011.08.002
-
(2011)
Bioorgan Chem
-
-
Karpoormath, R.1
Sayed, Y.2
Govender, P.3
Maguire, G.E.M.4
Kruger, H.G.5
Govender, T.6
-
45
-
-
11644261806
-
-
Morris GM, Goodsell DS, Halliday RS, Huey R, Hart WE, Belew RK et al. J Comp Chem 1998;19:1639
-
(1998)
J Comp Chem
, vol.19
, pp. 1639
-
-
Morris, G.M.1
Goodsell, D.S.2
Halliday, R.S.3
Huey, R.4
Hart, W.E.5
Belew, R.K.6
-
46
-
-
76149120388
-
Improving the speed and accuracy of docking with a new scoring function, efficient optimization, and multithreading
-
Trott O, Olson AJ. AutoDock Vina: Improving the speed and accuracy of docking with a new scoring function, efficient optimization, and multithreading. J Comput Chem 2010;31:455-461
-
(2010)
J Comput Chem
, Issue.31
, pp. 455-461
-
-
Trott, O.1
Olson, A.J.2
AutoDock Vina3
-
47
-
-
2942532422
-
Development and testing of a general amber force field
-
Wang J, Wolf RM, Caldwell JW, Kollman PA, Case DA. Development and testing of a general amber force field. J Comput Chem 2004;25:1157-1174
-
(2004)
J Comput Chem
, vol.25
, pp. 1157-1174
-
-
Wang, J.1
Wolf, R.M.2
Caldwell, J.W.3
Kollman, P.A.4
Case, D.A.5
-
48
-
-
23444454552
-
The Amber biomolecular simulation programs
-
DOI 10.1002/jcc.20290
-
Case DA, Cheatham TE 3rd, Darden T, Gohlke H, Luo R, Merz KM Jr et al. The Amber biomolecular simulation programs. J Comput Chem 2005;26:1668-1688 (Pubitemid 43076180)
-
(2005)
Journal of Computational Chemistry
, vol.26
, Issue.16
, pp. 1668-1688
-
-
Case, D.A.1
Cheatham III, T.E.2
Darden, T.3
Gohlke, H.4
Luo, R.5
Merz Jr., K.M.6
Onufriev, A.7
Simmerling, C.8
Wang, B.9
Woods, R.J.10
-
49
-
-
2342618736
-
Computational study of the conformational preferences of the R-8-amino-pentacyclo[5.4.0.0(2 6 0(310)0(59)]undecane-8-carboxylic acid monopeptide
-
Bisetty K, Gomez-Catalan J, Aleman C, Giralt E, Kruger HG, Perez JJ. Computational study of the conformational preferences of the R-8-amino-pentacyclo[5.4.0.0(2,6).0(3,10).0(5,9)]undecane-8-carboxylic acid monopeptide. J Pept Sci 2004;10:274-284
-
(2004)
J Pept Sci
, vol.10
, pp. 274-284
-
-
Bisetty, K.1
Gomez-Catalan, J.2
Aleman, C.3
Giralt, E.4
Kruger, H.G.5
Perez, J.J.6
-
51
-
-
63849087289
-
Structure of HIV-1 protease in complex with potent inhibitor KNI-272 determined by high-resolution X-ray and neutron crystallography
-
Adachi M, Ohhara T, Kurihara K, Tamada T, Honjo E, Okazaki N et al. Structure of HIV-1 protease in complex with potent inhibitor KNI-272 determined by high-resolution X-ray and neutron crystallography. Proc Natl Acad Sci USA 2009;106:4641-4646
-
(2009)
Proc Natl Acad Sci USA
, vol.106
, pp. 4641-4646
-
-
Adachi, M.1
Ohhara, T.2
Kurihara, K.3
Tamada, T.4
Honjo, E.5
Okazaki, N.6
|