Shotgun Proteomic Analysis of Plasma from Dairy Cattle Suffering from Footrot: Characterization of Potential Disease-Associated Factors

PLoS ONE

Volumn 8, Issue 2, 2013, Pages

  Sun, Dongbo ^a,b   Zhang, Hong ^a   Guo, Donghua ^a   Sun, Anguo ^c   Wang, Hongbin ^b  

^a HEILONGJIANG BAYI AGRICULTURAL UNIVERSITY   (China)

^b NORTHEAST AGRICULTURAL UNIVERSITY   (China)

^c INSTITUTE OF BIOCHEMISTRY AND CELL BIOLOGY   (China)

Author keywords

[No Author keywords available]

Indexed keywords

ACUTE PHASE PROTEIN; AFAMIN PRECURSOR; ALTERNATIVE COMPLEMENT PATHWAY C3 C5 CONVERTASE; AMYLOID A4 PROTEIN PRECURSOR; APOLIPOPROTEIN C3; APOLIPOPROTEIN D; BIOLOGICAL MARKER; BLOOD CLOTTING FACTOR; CELL ADHESION PROTEIN; COMPLEMENT FACTOR H; CYTOSKELETON PROTEIN; HAPTOGLOBIN; HAPTOGLOBIN PRECURSOR; HEMOGLOBIN BETA CHAIN; HEMOPEXIN PRECURSOR; HISTIDINE RICH GLYCOPROTEIN; IMMUNE RECOGNITION MOLECULE; IMMUNOGLOBULIN; PEPTIDOGLYCAN RECOGNITION PROTEIN; PLASMA PROTEIN; PLASMINOGEN; PREALBUMIN; PREPROTHROMBIN; PROTEIN; PROTEOKERATAN SULFATE; PROTEOME; REGULATOR PROTEIN; SERPINA10 PROTEIN; TETRANECTIN; TRANSFERRIN; UNCLASSIFIED DRUG;

ANIMAL TISSUE; ARTICLE; BLOOD ANALYSIS; BLOOD SAMPLING; DAIRY CATTLE; FOOT ROT; ISOELECTRIC POINT; LIQUID CHROMATOGRAPHY; MOLECULAR WEIGHT; NONHUMAN; NUCLEOTIDE SEQUENCE; PROTEIN ANALYSIS; PROTEIN EXPRESSION; PROTEOMICS; TANDEM MASS SPECTROMETRY;

ANIMALS; BLOOD PROTEINS; CATTLE; CATTLE DISEASES; FUSOBACTERIUM INFECTIONS; FUSOBACTERIUM NECROPHORUM; PROTEOMICS; TANDEM MASS SPECTROMETRY;

EID: 84873901045     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0055973     Document Type: Article

References (51)

1. Nagaraja TG, Narayanan SK, Stewart GC, Chengappa MM, (2005) Fusobacterium necrophorum infections in animals: pathogenesis and pathogenic mechanisms. Anaerobe 11: 239-46.
2. Zhou H, Bennett G, Hickford JG, (2009) Variation in Fusobacterium necrophorum strains present on the hooves of footrot infected sheep, goats and cattle. Vet Microbiol 135: 363-67.
3. Tan Z, Nagaraja T, Chengappa M, (1996) Fusobacterium necrophorum infections: virulence factors, pathogenic mechanism and control measures. Vet Res Commun 20: 113-40.
4. Narayanan SK, Chengappa MM, Stewart GC, Nagaraja TG, (2003) Immunogenicity and protective effects of truncated recombinant leukotoxin proteins of Fusobacterium necrophorum in mice. Vet Microbiol 93: 335-47.
5. Guo DH, SUN DB, Wu R, Yang HM, Zheng JS, et al. (2010) An indirect ELISA for serodiagnosis of cattle footrot caused by Fusobacterium necrophorum. Anaerobe 16: 317-20.
6. Sun DB, Wu R, Li GL, Zheng JS, Liu XP, et al. (2009) Identification of three immunodominant regions on leukotoxin protein of Fusobacterium necrophorum. Vet Res Commun 33: 749-55.
7. Ceciliani F, Ceron JJ, Eckersall PD, Sauerwein H (2012) Acute phase proteins in ruminants. J Proteomics doi:10.1016/j.jprot.2012.04.004.
8. Issaq HJ, Xiao Z, Veenstra TD, (2007) Serum and plasma proteomics. Chem Rev 107: 3601-20.
9. Lai YH, Li ZC, Chen LL, Dai Z, Zou XY, (2012) Identification of potential host proteins for influenza A virus based on topological and biological characteristics by proteome-wide network approach. J Proteomics 75: 2500-13.
10. Alonso-Fauste I, Andrés M, Iturralde M, Lampreave F, Gallart J, et al. (2012) Proteomic characterization by 2-DE in bovine serum and whey from healthy and mastitis affected farm animals. J Proteomics doi:10.1016/j.jprot.2011.11.035.
11. Meng R, Gormley M, Bhat VB, Rosenberg A, Quong AA, (2011) Low abundance protein enrichment for discovery of candidate plasma protein biomarkers for early detection of breast cancer. J Proteomics 75: 366-74.
12. Kujala M, Orro T, Soveri T, (2010) Serum acute phase proteins as a marker of inflammation in dairy cattle with hoof diseases. Vet Rec 166: 240-1.
13. Nazifi S, Esmailnezhad Z, Haghkhah M, Ghadirian S, Mirzaei A, (2012) Acute phase response in lame cattle with interdigital dermatitis. World J Microbiol Biotechnol 28: 1791-96.
14. Fertin M, Burdese J, Beseme O, Amouyel P, Bauters C, et al. (2011) Strategy for purification and mass spectrometry identification of SELDI peaks corresponding to low-abundance plasma and serum proteins. J Proteomics 74: 420-30.
15. Goo YA, Goodlett DR, (2010) Advances in proteomic prostate cancer biomarker discovery. J Proteomics 73: 1839-50.
16. Zhang MZ, Sun ZC, Fu XR, Nan FF, Fan QX, et al. (2009) Analysis of serum proteome profiles of non-Hodgkin lymphoma for biomarker identification. J Proteomics 72: 952-9.
17. Guerrier L, D'Autreaux B, Atanassov C, Khoder G, Boschetti E, (2008) Evaluation of a standardized method of protein purification and identification after discovery by mass spectrometry. J Proteomics 71: 368-78.
18. Wang ZQ, Wang L, Cui J, (2012) Proteomic analysis of Trichinella spiralis proteins in intestinal epithelial cells after culture with their larvae by shotgun LC-MS/MS approach. J Proteomics 75: 2375-83.
19. Li JY, Chen X, Fan W, Moghaddam SH, Chen M, et al. (2009) Proteomic and bioinformatic analysis on endocrine organs of domesticated silkworm, Bombyx mori L. for a comprehensive understanding of their roles and relations. J Proteome Res 8: 2620-32.
20. Malard V, Chardan L, Roussi S, Darolles C, Sage N, et al. (2012) Analytical constraints for the analysis of human cell line secretomes by shotgun proteomics. J Proteomics 75: 1043-54.
21. He P, He HZ, Dai J, Wang Y, Sheng QH, et al. (2005) The human plasma proteome: analysis of Chinese serum using shotgun strategy. Proteomics 5: 3442-53.
22. Gilmore JM, Washburn MP, (2010) Advances in shotgun proteomics and the analysis of membrane proteomes. J Proteomics 73: 2078-91.
23. Dai J, Shieh CH, Sheng QH, Zhou H, Zeng R, (2005) Proteomic analysis with integrated multiple dimensional liquid chromatography/mass spectrometry based on elution of ion exchange column using pH steps. Anal Chem 77: 5793-99.
24. Huang DW, Sherman BT, Lempicki RA, (2009) Systematic and integrative analysis of large gene lists using DAVID Bioinformatics Resources. Nature Protoc 4: 44-57.
25. Huang DW, Sherman BT, Lempicki RA, (2009) Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large gene lists. Nucleic Acids Res 37: 1-13.
26. Ashburner M, Ball CA, Blake JA, Botstein D, Butler H, et al. (2000) Gene ontology: tool for the unification of biology. The Gene Ontology Consortium. Nat Genet 25: 25-9.
27. Walsby AE, (1994) Gas vesicles. Microbiol Rev 58: 94-144.
28. Kanoe M, (1990) Fusobacterium necrophorum hemolysin in bovine hepatic abscess. Zentralbl Veterinarmed B 37: 770-3.
29. Shinjo T, (1983) Fusobacterium necrophorum isolated from a hepatic and from mastitic udder secretions in a heifer. Ann Microbiol (Inst. Pasteur) 134B: 401-9.
30. Nagaraja TG, Narayanan SK, Stewart GC, Chengappa MM, (2005) Fusobacterium necrophorum infections in animals: pathogenesis and pathogenic mechanisms. Anaerobe 11: 239-46.
31. Hutjens M (1998) Proceedings from these hooves are made for walking, Kaukauna, WI.
32. Goff JP, Horst RL, (1997) Physiological changes at parturition and their relationship to metabolic disorders. J Dairy Sci 80: 1260-1268.
33. Morimatsu M, Syuto B, Shimada N, Fujinaga T, Yamamoto S, et al. (1991) Isolation and characterization of bovine haptoglobin from acute phase sera. J Biol Chem 266: 11833-7.
34. van Gent D, Sharp P, Morgan K, Kalsheker N, (2003) Serpins: structure, function and molecular evolution. Int J Biochem Cell Biol 35: 1536-47.
35. Angelucci S, Ciavardelli D, Di Giuseppe F, Eleuterio E, Sulpizio M, et al. (2006) Proteome analysis of human follicular fluid. Biochim Biophys Acta 1764: 1775-85.
36. Makimura S, Suzuki N, (1982) Quantitative determination of bovine serum haptoglobin and its elevation in some inflammatory diseases. Nihon Juigaku Zasshi 44: 15-21.
37. Ohtsuka H, Kudo K, Mori K, Nagai F, Hatsugaya A, et al. (2001) Acute phase response in naturally occurring coliform mastitis. J Vet Med Sci 63: 675-678.
38. Ahmed N, Barker G, Oliva KT, Hoffmann P, Riley C, et al. (2004) Proteomic-based identification of haptoglobin-1 precursor as a novel circulating biomarker of ovarian cancer. Br J Cancer 91: 129-40.
39. Hall RE, Horsfall DJ, Stahl J, Vivekanandan S, Ricciardelli C, et al. (2004) Apolipoprotein-D: a novel cellular marker for HGPIN and prostate cancer. Prostate 58: 103-8.
40. Jackson D, Craven RA, Hutson RC, Graze I, Lueth P, et al. (2007) Proteomic profiling identifies afamin as a potential biomarker for ovarian cancer. Clin Cancer Res 13: 7370-9.
41. Choe KM, Werner T, Stöven S, Hultmark D, Anderson KV, (2002) Requirement for a peptidoglycan recognition protein (PGRP) in Relish activation and antibacterial immune responses in Drosophila. Science 296: 359-62.
42. Kang D, Liu G, Lundstrom A, Gelius E, Steiner H, (1998) A peptidoglycan recognition protein in innate immunity conserved from insects to mammals. Proc Natl Acad Sci USA 95: 10078-82.
43. Liu C, Xu Z, Gupta D, Dziarski R, (2001) Peptidoglycan recognition proteins: a novel family of four human innate immunity pattern recognition molecules. J Biol Chem 276: 34686-94.
44. Thonar EJ, Lenz ME, Klintworth GK, Caterson B, Pachman LM, et al. (1985) Quantification of keratan sulfate in blood as a marker of cartilage catabolism. Arthritis Rheum 28: 1367-76.
45. Kuiper JI, Verbeek JH, Frings-Dresen MH, Ikkink AJ, (1998) Keratan sulfate as a potential biomarker of loading of the intervertebral disc. Spine 23: 657-63.
46. Ohashi K, Parker JL, Ouchi N, Higuchi A, Vita JA, et al. (2010) Adiponectin promotes macrophage polarization toward an anti-inflammatory phenotype. J Biol Chem 285: 6153-60.
47. Ouchi N, Walsh K, (2007) Adiponectin as an anti-inflammatory factor. Clin Chim Acta 380: 24-30.
48. Folco EJ, Rocha VZ, López-Ilasaca M, Libby P, (2009) Adiponectin inhibits pro-inflammatory signaling in human macrophages independent of interleukin-10. J Biol Chem 284: 25569-75.
49. Yokota T, Oritani K, Takahashi I, Ishikawa J, Matsuyama A, et al. (2000) Adiponectin, a new member of the family of soluble defense collagens, negatively regulates the growth of myelomonocytic progenitors and the functions of macrophages. Blood 96: 1723-32.
50. Weisel JW, (2005) Fibrinogen and fibrin. Adv Protein Chem 70: 247-99.
51. Høj Nielsen A, Knudsen F, (1987) Angiotensinogen is an acute-phase protein in man. Scand J Clin Lab Invest 47: 175-8.