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Volumn 73, Issue 10, 2010, Pages 1839-1850

Advances in proteomic prostate cancer biomarker discovery

Author keywords

Biomarker; Prostate cancer; Proteomics; Systems biology

Indexed keywords

BIOLOGICAL MARKER; GLYCOPROTEIN; PROSTATE SPECIFIC ANTIGEN;

EID: 77956417496     PISSN: 18743919     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.jprot.2010.04.002     Document Type: Review
Times cited : (56)

References (88)
  • 1
    • 0029902273 scopus 로고    scopus 로고
    • Recent advances in prostate cancer metastasis
    • Waltregny D., Castronovo V. Recent advances in prostate cancer metastasis. Tumori 1996, 82:193-204.
    • (1996) Tumori , vol.82 , pp. 193-204
    • Waltregny, D.1    Castronovo, V.2
  • 2
    • 0028411870 scopus 로고
    • The dilemmas of prostate cancer
    • Garnick M.B. The dilemmas of prostate cancer. Sci Am 1994, 270:72-81.
    • (1994) Sci Am , vol.270 , pp. 72-81
    • Garnick, M.B.1
  • 4
    • 41149166182 scopus 로고    scopus 로고
    • Prostate-specific antigen and prostate cancer: prediction, detection and monitoring
    • Lilja H., Ulmert D., Vickers A.J. Prostate-specific antigen and prostate cancer: prediction, detection and monitoring. Nat Rev Cancer 2008, 8:268-278.
    • (2008) Nat Rev Cancer , vol.8 , pp. 268-278
    • Lilja, H.1    Ulmert, D.2    Vickers, A.J.3
  • 5
    • 50849143820 scopus 로고    scopus 로고
    • Improved prediction of disease relapse after radical prostatectomy through a panel of preoperative blood-based biomarkers
    • Shariat S.F., Karam J.A., Walz J., Roehrborn C.G., Montorsi F., Margulis V., et al. Improved prediction of disease relapse after radical prostatectomy through a panel of preoperative blood-based biomarkers. Clin Cancer Res 2008, 14:3785-3791.
    • (2008) Clin Cancer Res , vol.14 , pp. 3785-3791
    • Shariat, S.F.1    Karam, J.A.2    Walz, J.3    Roehrborn, C.G.4    Montorsi, F.5    Margulis, V.6
  • 6
    • 84928580276 scopus 로고
    • Studies on prostatic cancer: effect of castration, of estrogen and of androgen injection on serum phosphatases in metastatic carcinoma of the prostate
    • Huggins C., Hodges C.V. Studies on prostatic cancer: effect of castration, of estrogen and of androgen injection on serum phosphatases in metastatic carcinoma of the prostate. Cancer Res 1941, 1:293-297.
    • (1941) Cancer Res , vol.1 , pp. 293-297
    • Huggins, C.1    Hodges, C.V.2
  • 7
    • 26844443339 scopus 로고    scopus 로고
    • The androgen receptor and mechanisms for androgen independence in prostate cancer
    • Javidan J., Deitch AD Shi X.B., de Vere White R.W. The androgen receptor and mechanisms for androgen independence in prostate cancer. Cancer Invest 2005, 23:520-528.
    • (2005) Cancer Invest , vol.23 , pp. 520-528
    • Javidan, J.1    Deitch, A.D.2    Shi, X.B.3    de Vere White, R.W.4
  • 8
    • 0037435030 scopus 로고    scopus 로고
    • Mass spectrometry-based proteomics
    • Aebersold R., Mann M. Mass spectrometry-based proteomics. Nature 2003, 422:198-207.
    • (2003) Nature , vol.422 , pp. 198-207
    • Aebersold, R.1    Mann, M.2
  • 9
    • 34748864783 scopus 로고    scopus 로고
    • Clinical proteomics: discovery of cancer biomarkers using mass spectrometry and bioinformatics approaches-a prostate cancer perspective
    • Matharoo-Ball B., Ball G., Rees R. Clinical proteomics: discovery of cancer biomarkers using mass spectrometry and bioinformatics approaches-a prostate cancer perspective. Vaccine 2007, 25(Suppl 2):B110-B121.
    • (2007) Vaccine , vol.25 , Issue.SUPPL 2
    • Matharoo-Ball, B.1    Ball, G.2    Rees, R.3
  • 11
    • 36248987833 scopus 로고    scopus 로고
    • Biomarkers for prostate cancer
    • Schiffer E. Biomarkers for prostate cancer. World J Urol 2007, 25:557-562.
    • (2007) World J Urol , vol.25 , pp. 557-562
    • Schiffer, E.1
  • 12
    • 67649716303 scopus 로고    scopus 로고
    • Biomarkers in prostate cancer diagnosis and prognosis: beyond prostate-specific antigen
    • Fradet Y. Biomarkers in prostate cancer diagnosis and prognosis: beyond prostate-specific antigen. Curr Opin Urol 2009, 19:243-246.
    • (2009) Curr Opin Urol , vol.19 , pp. 243-246
    • Fradet, Y.1
  • 14
    • 68149100805 scopus 로고    scopus 로고
    • Proteomics and opportunities for clinical translation in urological disease
    • Vaezzadeh A.R., Steen H., Freeman M.R., Lee R.S. Proteomics and opportunities for clinical translation in urological disease. J Urol 2009, 182:835-843.
    • (2009) J Urol , vol.182 , pp. 835-843
    • Vaezzadeh, A.R.1    Steen, H.2    Freeman, M.R.3    Lee, R.S.4
  • 15
    • 0001644020 scopus 로고    scopus 로고
    • The human plasma proteome: history, character, and diagnostic prospects
    • Anderson N.L., Anderson N.G. The human plasma proteome: history, character, and diagnostic prospects. Mol Cell Proteomics 2002, 1:845-867.
    • (2002) Mol Cell Proteomics , vol.1 , pp. 845-867
    • Anderson, N.L.1    Anderson, N.G.2
  • 16
    • 0036645099 scopus 로고    scopus 로고
    • Serum protein fingerprinting coupled with a pattern-matching algorithm distinguishes prostate cancer from benign prostate hyperplasia and healthy men
    • Adam B.L., Qu Y., Davis J.W., Ward M.D., Clements M.A., Cazares L.H., et al. Serum protein fingerprinting coupled with a pattern-matching algorithm distinguishes prostate cancer from benign prostate hyperplasia and healthy men. Cancer Res 2002, 62:3609-3614.
    • (2002) Cancer Res , vol.62 , pp. 3609-3614
    • Adam, B.L.1    Qu, Y.2    Davis, J.W.3    Ward, M.D.4    Clements, M.A.5    Cazares, L.H.6
  • 17
    • 0036791428 scopus 로고    scopus 로고
    • Boosted decision tree analysis of surface-enhanced laser desorption/ionization mass spectral serum profiles discriminates prostate cancer from noncancer patients
    • Qu Y., Adam B.L., Yasui Y., Ward M.D., Cazares L.H., Schellhammer P.F., et al. Boosted decision tree analysis of surface-enhanced laser desorption/ionization mass spectral serum profiles discriminates prostate cancer from noncancer patients. Clin Chem 2002, 48:1835-1843.
    • (2002) Clin Chem , vol.48 , pp. 1835-1843
    • Qu, Y.1    Adam, B.L.2    Yasui, Y.3    Ward, M.D.4    Cazares, L.H.5    Schellhammer, P.F.6
  • 18
    • 19944419092 scopus 로고    scopus 로고
    • Evaluation of serum protein profiling by surface-enhanced laser desorption/ionization time-of-flight mass spectrometry for the detection of prostate cancer: I. Assessment of platform reproducibility
    • Semmes O.J., Feng Z., Adam B.L., Banez L.L., Bigbee W.L., Campos D., et al. Evaluation of serum protein profiling by surface-enhanced laser desorption/ionization time-of-flight mass spectrometry for the detection of prostate cancer: I. Assessment of platform reproducibility. Clin Chem 2005, 51:102-112.
    • (2005) Clin Chem , vol.51 , pp. 102-112
    • Semmes, O.J.1    Feng, Z.2    Adam, B.L.3    Banez, L.L.4    Bigbee, W.L.5    Campos, D.6
  • 19
    • 38749109634 scopus 로고    scopus 로고
    • Analytical validation of serum proteomic profiling for diagnosis of prostate cancer: sources of sample bias
    • McLerran D., Grizzle W.E., Feng Z., Bigbee W.L., Banez L.L., Cazares L.H., et al. Analytical validation of serum proteomic profiling for diagnosis of prostate cancer: sources of sample bias. Clin Chem 2008, 54:44-52.
    • (2008) Clin Chem , vol.54 , pp. 44-52
    • McLerran, D.1    Grizzle, W.E.2    Feng, Z.3    Bigbee, W.L.4    Banez, L.L.5    Cazares, L.H.6
  • 20
    • 38749151898 scopus 로고    scopus 로고
    • SELDI-TOF MS whole serum proteomic profiling with IMAC surface does not reliably detect prostate cancer
    • McLerran D., Grizzle W.E., Feng Z., Thompson I.M., Bigbee W.L., Cazares L.H., et al. SELDI-TOF MS whole serum proteomic profiling with IMAC surface does not reliably detect prostate cancer. Clin Chem 2008, 54:53-60.
    • (2008) Clin Chem , vol.54 , pp. 53-60
    • McLerran, D.1    Grizzle, W.E.2    Feng, Z.3    Thompson, I.M.4    Bigbee, W.L.5    Cazares, L.H.6
  • 21
    • 59349092682 scopus 로고    scopus 로고
    • Predicting prostate cancer biochemical recurrence using a panel of serum proteomic biomarkers
    • Rosenzweig C.N., Zhang Z., Sun X., Sokoll L.J., Osborne K., Partin A.W., et al. Predicting prostate cancer biochemical recurrence using a panel of serum proteomic biomarkers. J Urol 2009, 181:1407-1414.
    • (2009) J Urol , vol.181 , pp. 1407-1414
    • Rosenzweig, C.N.1    Zhang, Z.2    Sun, X.3    Sokoll, L.J.4    Osborne, K.5    Partin, A.W.6
  • 22
    • 61849131685 scopus 로고    scopus 로고
    • 2D-DIGE as a strategy to identify serum markers for the progression of prostate cancer
    • Byrne J.C., Downes M.R., O'Donoghue N., O'Keane C., O'Neill A., Fan Y., et al. 2D-DIGE as a strategy to identify serum markers for the progression of prostate cancer. J Proteome Res 2009, 8:942-957.
    • (2009) J Proteome Res , vol.8 , pp. 942-957
    • Byrne, J.C.1    Downes, M.R.2    O'Donoghue, N.3    O'Keane, C.4    O'Neill, A.5    Fan, Y.6
  • 23
    • 68849131400 scopus 로고    scopus 로고
    • Unfavorable prognostic value of human PEDF decreased in high-grade prostatic intraepithelial neoplasia: a differential proteomics approach
    • Qingyi Z., Lin Y., Junhong W., Jian S., Weizhou H., Long M., et al. Unfavorable prognostic value of human PEDF decreased in high-grade prostatic intraepithelial neoplasia: a differential proteomics approach. Cancer Invest 2009, 27:794-801.
    • (2009) Cancer Invest , vol.27 , pp. 794-801
    • Qingyi, Z.1    Lin, Y.2    Junhong, W.3    Jian, S.4    Weizhou, H.5    Long, M.6
  • 24
    • 33750364830 scopus 로고    scopus 로고
    • The human urinary proteome contains more than 1500 proteins, including a large proportion of membrane proteins
    • Adachi J., Kumar C., Zhang Y., Olsen J.V., Mann M. The human urinary proteome contains more than 1500 proteins, including a large proportion of membrane proteins. Genome Biol 2006, 7:R80.
    • (2006) Genome Biol , vol.7
    • Adachi, J.1    Kumar, C.2    Zhang, Y.3    Olsen, J.V.4    Mann, M.5
  • 26
    • 33344479181 scopus 로고    scopus 로고
    • Discovery and validation of new protein biomarkers for urothelial cancer: a prospective analysis
    • Theodorescu D., Wittke S., Ross M.M., Walden M., Conaway M., Just I., et al. Discovery and validation of new protein biomarkers for urothelial cancer: a prospective analysis. Lancet Oncol 2006, 7:230-240.
    • (2006) Lancet Oncol , vol.7 , pp. 230-240
    • Theodorescu, D.1    Wittke, S.2    Ross, M.M.3    Walden, M.4    Conaway, M.5    Just, I.6
  • 27
    • 23144461504 scopus 로고    scopus 로고
    • Pilot study of capillary electrophoresis coupled to mass spectrometry as a tool to define potential prostate cancer biomarkers in urine
    • Theodorescu D., Fliser D., Wittke S., Mischak H., Krebs R., Walden M., et al. Pilot study of capillary electrophoresis coupled to mass spectrometry as a tool to define potential prostate cancer biomarkers in urine. Electrophoresis 2005, 26:2797-2808.
    • (2005) Electrophoresis , vol.26 , pp. 2797-2808
    • Theodorescu, D.1    Fliser, D.2    Wittke, S.3    Mischak, H.4    Krebs, R.5    Walden, M.6
  • 28
    • 0035984540 scopus 로고    scopus 로고
    • Capillary electrophoresis mass spectrometry and its application to the analysis of biological mixtures
    • Moini M. Capillary electrophoresis mass spectrometry and its application to the analysis of biological mixtures. Anal Bioanal Chem 2002, 373:466-480.
    • (2002) Anal Bioanal Chem , vol.373 , pp. 466-480
    • Moini, M.1
  • 29
    • 3543063251 scopus 로고    scopus 로고
    • Capillary electrophoresis coupled to mass spectrometer for automated and robust polypeptide determination in body fluids for clinical use
    • Kaiser T., Wittke S., Just I., Krebs R., Bartel S., Fliser D., et al. Capillary electrophoresis coupled to mass spectrometer for automated and robust polypeptide determination in body fluids for clinical use. Electrophoresis 2004, 25:2044-2055.
    • (2004) Electrophoresis , vol.25 , pp. 2044-2055
    • Kaiser, T.1    Wittke, S.2    Just, I.3    Krebs, R.4    Bartel, S.5    Fliser, D.6
  • 30
    • 10644231668 scopus 로고    scopus 로고
    • Proteomic analysis of voided urine after prostatic massage from patients with prostate cancer: a pilot study
    • Rehman I., Azzouzi A.R., Catto J.W., Allen S., Cross S.S., Feeley K., et al. Proteomic analysis of voided urine after prostatic massage from patients with prostate cancer: a pilot study. Urology 2004, 64:1238-1243.
    • (2004) Urology , vol.64 , pp. 1238-1243
    • Rehman, I.1    Azzouzi, A.R.2    Catto, J.W.3    Allen, S.4    Cross, S.S.5    Feeley, K.6
  • 31
    • 34547828095 scopus 로고    scopus 로고
    • Proteomic approach for purification of seminal plasma proteins involved in tumor proliferation
    • Hassan M.I., Kumar V., Kashav T., Alam N., Singh T.P., Yadav S. Proteomic approach for purification of seminal plasma proteins involved in tumor proliferation. J Sep Sci 2007, 30:1979-1988.
    • (2007) J Sep Sci , vol.30 , pp. 1979-1988
    • Hassan, M.I.1    Kumar, V.2    Kashav, T.3    Alam, N.4    Singh, T.P.5    Yadav, S.6
  • 32
    • 61449318282 scopus 로고    scopus 로고
    • Protein profiling of post-prostatic massage urine specimens by surface-enhanced laser desorption/ionization time-of-flight mass spectrometry to discriminate between prostate cancer and benign lesions
    • Okamoto A., Yamamoto H., Imai A., Hatakeyama S., Iwabuchi I., Yoneyama T., et al. Protein profiling of post-prostatic massage urine specimens by surface-enhanced laser desorption/ionization time-of-flight mass spectrometry to discriminate between prostate cancer and benign lesions. Oncol Rep 2009, 21:73-79.
    • (2009) Oncol Rep , vol.21 , pp. 73-79
    • Okamoto, A.1    Yamamoto, H.2    Imai, A.3    Hatakeyama, S.4    Iwabuchi, I.5    Yoneyama, T.6
  • 33
    • 67651249913 scopus 로고    scopus 로고
    • Clinical collection and protein properties of expressed prostatic secretions as a source for biomarkers of prostatic disease
    • Drake R.R., White K.Y., Fuller T.W., Igwe E., Clements M.A., Nyalwidhe J.O., et al. Clinical collection and protein properties of expressed prostatic secretions as a source for biomarkers of prostatic disease. J Proteomics 2009, 72:907-917.
    • (2009) J Proteomics , vol.72 , pp. 907-917
    • Drake, R.R.1    White, K.Y.2    Fuller, T.W.3    Igwe, E.4    Clements, M.A.5    Nyalwidhe, J.O.6
  • 34
    • 33645805450 scopus 로고    scopus 로고
    • Prostasomes-their effects on human male reproduction and fertility
    • Burden H.P., Holmes C.H., Persad R., Whittington K. Prostasomes-their effects on human male reproduction and fertility. Hum Reprod Update 2006, 12:283-292.
    • (2006) Hum Reprod Update , vol.12 , pp. 283-292
    • Burden, H.P.1    Holmes, C.H.2    Persad, R.3    Whittington, K.4
  • 36
    • 58849151841 scopus 로고    scopus 로고
    • Structural heterogeneity and protein composition of exosome-like vesicles (prostasomes) in human semen
    • Poliakov A., Spilman M., Dokland T., Amling C.L., Mobley J.A. Structural heterogeneity and protein composition of exosome-like vesicles (prostasomes) in human semen. Prostate 2009, 69:159-167.
    • (2009) Prostate , vol.69 , pp. 159-167
    • Poliakov, A.1    Spilman, M.2    Dokland, T.3    Amling, C.L.4    Mobley, J.A.5
  • 37
    • 44849139575 scopus 로고    scopus 로고
    • Correlation of mRNA and protein levels: cell type-specific gene expression of cluster designation antigens in the prostate
    • Pascal L.E., True L.D., Campbell D.S., Deutsch E.W., Risk M., Coleman I.M., et al. Correlation of mRNA and protein levels: cell type-specific gene expression of cluster designation antigens in the prostate. BMC Genomics 2008, 9:246.
    • (2008) BMC Genomics , vol.9 , pp. 246
    • Pascal, L.E.1    True, L.D.2    Campbell, D.S.3    Deutsch, E.W.4    Risk, M.5    Coleman, I.M.6
  • 38
    • 78650421422 scopus 로고    scopus 로고
    • Identification of secreted glycoproteins of human prostate and bladder stromal cells by comparative quantitative proteomics
    • Goo Y.A., Liu A.Y., Ryu S., Shaffer S.A., Malmstrom L., Page L., et al. Identification of secreted glycoproteins of human prostate and bladder stromal cells by comparative quantitative proteomics. Prostate 2009, 69:49-61.
    • (2009) Prostate , vol.69 , pp. 49-61
    • Goo, Y.A.1    Liu, A.Y.2    Ryu, S.3    Shaffer, S.A.4    Malmstrom, L.5    Page, L.6
  • 40
    • 3342986727 scopus 로고    scopus 로고
    • Selective capture of prostatic basal cells and secretory epithelial cells for proteomic and genomic analysis
    • Diaz JI Cazares L.H., Corica A., John Semmes O. Selective capture of prostatic basal cells and secretory epithelial cells for proteomic and genomic analysis. Urol Oncol 2004, 22:329-336.
    • (2004) Urol Oncol , vol.22 , pp. 329-336
    • Diaz, J.I.1    Cazares, L.H.2    Corica, A.3    John Semmes, O.4
  • 42
    • 0034969901 scopus 로고    scopus 로고
    • New technologies for biomarker analysis of prostate cancer progression: laser capture microdissection and tissue proteomics
    • Paweletz C.P., Liotta L.A., Petricoin E.F. New technologies for biomarker analysis of prostate cancer progression: laser capture microdissection and tissue proteomics. Urology 2001, 57:160-163.
    • (2001) Urology , vol.57 , pp. 160-163
    • Paweletz, C.P.1    Liotta, L.A.2    Petricoin, E.F.3
  • 43
    • 0344236284 scopus 로고    scopus 로고
    • Prostate carcinoma tissue proteomics for biomarker discovery
    • Zheng Y., Xu Y., Ye B., Lei J., Weinstein M.H., O'Leary M.P., et al. Prostate carcinoma tissue proteomics for biomarker discovery. Cancer 2003, 98:2576-2582.
    • (2003) Cancer , vol.98 , pp. 2576-2582
    • Zheng, Y.1    Xu, Y.2    Ye, B.3    Lei, J.4    Weinstein, M.H.5    O'Leary, M.P.6
  • 44
    • 53049099609 scopus 로고    scopus 로고
    • Proteomic analysis of conditioned media from the PC3, LNCaP, and 22Rv1 prostate cancer cell lines: discovery and validation of candidate prostate cancer biomarkers
    • Sardana G., Jung K., Stephan C., Diamandis E.P. Proteomic analysis of conditioned media from the PC3, LNCaP, and 22Rv1 prostate cancer cell lines: discovery and validation of candidate prostate cancer biomarkers. J Proteome Res 2008, 7:3329-3338.
    • (2008) J Proteome Res , vol.7 , pp. 3329-3338
    • Sardana, G.1    Jung, K.2    Stephan, C.3    Diamandis, E.P.4
  • 45
    • 1642535545 scopus 로고    scopus 로고
    • Quantitative proteomic analysis of proteins released by neoplastic prostate epithelium
    • Martin D.B., Gifford D.R., Wright M.E., Keller A., Yi E., Goodlett D.R., et al. Quantitative proteomic analysis of proteins released by neoplastic prostate epithelium. Cancer Res 2004, 64:347-355.
    • (2004) Cancer Res , vol.64 , pp. 347-355
    • Martin, D.B.1    Gifford, D.R.2    Wright, M.E.3    Keller, A.4    Yi, E.5    Goodlett, D.R.6
  • 47
    • 0036462601 scopus 로고    scopus 로고
    • Protein N-glycosylation along the secretory pathway: relationship to organelle topography and function, protein quality control, and cell interactions
    • Roth J. Protein N-glycosylation along the secretory pathway: relationship to organelle topography and function, protein quality control, and cell interactions. Chem Rev 2002, 102:285-303.
    • (2002) Chem Rev , vol.102 , pp. 285-303
    • Roth, J.1
  • 49
    • 35848967232 scopus 로고    scopus 로고
    • Pre-operative prediction of serum CA125 level in women with ovarian masses
    • Benjapibal M., Neungton C. Pre-operative prediction of serum CA125 level in women with ovarian masses. Med Assoc Thai 2007, 90:1986-1991.
    • (2007) Med Assoc Thai , vol.90 , pp. 1986-1991
    • Benjapibal, M.1    Neungton, C.2
  • 50
    • 35848967232 scopus 로고    scopus 로고
    • Pre-operative prediction of serum CA125 level in women with ovarian masses
    • Benjapibal M., Neungton C. Pre-operative prediction of serum CA125 level in women with ovarian masses. J Med Assoc Thai 2007, 90:1986-1991.
    • (2007) J Med Assoc Thai , vol.90 , pp. 1986-1991
    • Benjapibal, M.1    Neungton, C.2
  • 51
    • 0034131162 scopus 로고    scopus 로고
    • Protein glycosylation and diseases: blood and urinary oligosaccharides as markers for diagnosis and therapeutic monitoring
    • Durand G., Seta N. Protein glycosylation and diseases: blood and urinary oligosaccharides as markers for diagnosis and therapeutic monitoring. Clin Chem 2000, 46:795-805.
    • (2000) Clin Chem , vol.46 , pp. 795-805
    • Durand, G.1    Seta, N.2
  • 52
    • 0036019907 scopus 로고    scopus 로고
    • Protein glycosylation: nature, distribution, enzymatic formation, and disease implications of glycopeptide bonds
    • Spiro R.G. Protein glycosylation: nature, distribution, enzymatic formation, and disease implications of glycopeptide bonds. Glycobiology 2002, 12:43R-56R.
    • (2002) Glycobiology , vol.12
    • Spiro, R.G.1
  • 53
    • 10344254351 scopus 로고    scopus 로고
    • Analysis of prostate cancer by proteomics using tissue specimens
    • Liu A.Y., Zhang H., Sorensen C.M., Diamond D.L. Analysis of prostate cancer by proteomics using tissue specimens. J Urol 2005, 173:73-78.
    • (2005) J Urol , vol.173 , pp. 73-78
    • Liu, A.Y.1    Zhang, H.2    Sorensen, C.M.3    Diamond, D.L.4
  • 54
    • 33750620940 scopus 로고    scopus 로고
    • Lectin capture strategies combined with mass spectrometry for the discovery of serum glycoprotein biomarkers
    • Drake R.R., Schwegler E.E., Malik G., Diaz J., Block T., Mehta A., et al. Lectin capture strategies combined with mass spectrometry for the discovery of serum glycoprotein biomarkers. Mol Cell Proteomics 2006, 5:1957-1967.
    • (2006) Mol Cell Proteomics , vol.5 , pp. 1957-1967
    • Drake, R.R.1    Schwegler, E.E.2    Malik, G.3    Diaz, J.4    Block, T.5    Mehta, A.6
  • 55
    • 0032875697 scopus 로고    scopus 로고
    • Quantitative analysis of complex protein mixtures using isotope-coded affinity tags
    • Gygi S.P., Rist B., Gerber S.A., Turecek F., Gelb M.H., Aebersold R. Quantitative analysis of complex protein mixtures using isotope-coded affinity tags. Nat Biotechnol 1999, 17:994-999.
    • (1999) Nat Biotechnol , vol.17 , pp. 994-999
    • Gygi, S.P.1    Rist, B.2    Gerber, S.A.3    Turecek, F.4    Gelb, M.H.5    Aebersold, R.6
  • 56
    • 23044504427 scopus 로고    scopus 로고
    • Assessing the effects of diurnal variation on the composition of human parotid saliva: quantitative analysis of native peptides using iTRAQ reagents
    • 44
    • Hardt M., Witkowska H.E., Webb S., Thomas L.R., Dixon S.E., Hall S.C., et al. Assessing the effects of diurnal variation on the composition of human parotid saliva: quantitative analysis of native peptides using iTRAQ reagents. Anal Chem 2005, 77:4947-4954. 44.
    • (2005) Anal Chem , vol.77 , pp. 4947-4954
    • Hardt, M.1    Witkowska, H.E.2    Webb, S.3    Thomas, L.R.4    Dixon, S.E.5    Hall, S.C.6
  • 57
    • 0036583926 scopus 로고    scopus 로고
    • Stable isotope labeling by amino acids in cell culture, SILAC, as a simple and accurate approach to expression proteomics
    • Ong S.E., Blagoev B., Kratchmarova I., Kristensen D.B., Steen H., Pandey A., et al. Stable isotope labeling by amino acids in cell culture, SILAC, as a simple and accurate approach to expression proteomics. Mol Cell Proteomics 2002, 1:376-386.
    • (2002) Mol Cell Proteomics , vol.1 , pp. 376-386
    • Ong, S.E.1    Blagoev, B.2    Kratchmarova, I.3    Kristensen, D.B.4    Steen, H.5    Pandey, A.6
  • 58
    • 1842528125 scopus 로고    scopus 로고
    • Quantification of C-reactive protein in the serum of patients with rheumatoid arthritis using multiple reaction monitoring mass spectrometry and 13C-labeled peptide standards
    • Kuhn E., Wu J., Karl J., Liao H., Zolg W., Guild B. Quantification of C-reactive protein in the serum of patients with rheumatoid arthritis using multiple reaction monitoring mass spectrometry and 13C-labeled peptide standards. Proteomics 2004, 4:1175-1186.
    • (2004) Proteomics , vol.4 , pp. 1175-1186
    • Kuhn, E.1    Wu, J.2    Karl, J.3    Liao, H.4    Zolg, W.5    Guild, B.6
  • 59
    • 38449109465 scopus 로고    scopus 로고
    • Systematic investigation of lycopene effects in LNCaP cells by use of novel large-scale proteomic analysis software
    • Goo Y.A., Li Z., Pajkovic N., Shaffer S., Taylor G., Chen J.Z., et al. Systematic investigation of lycopene effects in LNCaP cells by use of novel large-scale proteomic analysis software. Proteomics Clinical Applications 2007, 1:513-523.
    • (2007) Proteomics Clinical Applications , vol.1 , pp. 513-523
    • Goo, Y.A.1    Li, Z.2    Pajkovic, N.3    Shaffer, S.4    Taylor, G.5    Chen, J.Z.6
  • 60
    • 34147096541 scopus 로고    scopus 로고
    • Mass spectrometry analysis of the native protein complex containing actinin-4 in prostate cancer cells
    • Hara T., Honda K., Shitashige M., Ono M., Matsuyama H., Naito K., et al. Mass spectrometry analysis of the native protein complex containing actinin-4 in prostate cancer cells. Mol Cell Proteomics 2007, 6:479-491.
    • (2007) Mol Cell Proteomics , vol.6 , pp. 479-491
    • Hara, T.1    Honda, K.2    Shitashige, M.3    Ono, M.4    Matsuyama, H.5    Naito, K.6
  • 61
    • 1842476014 scopus 로고    scopus 로고
    • Quantitative profiling of LNCaP prostate cancer cells using isotope-coded affinity tags and mass spectrometry
    • Meehan K.L., Sadar M.D. Quantitative profiling of LNCaP prostate cancer cells using isotope-coded affinity tags and mass spectrometry. Proteomics 2004, 4:1116-1134.
    • (2004) Proteomics , vol.4 , pp. 1116-1134
    • Meehan, K.L.1    Sadar, M.D.2
  • 62
    • 44449152171 scopus 로고    scopus 로고
    • ITRAQ-facilitated proteomic analysis of human prostate cancer cells identifies proteins associated with progression
    • Glen A., Gan C.S., Hamdy F.C., Eaton C.L., Cross S.S., Catto J.W., et al. iTRAQ-facilitated proteomic analysis of human prostate cancer cells identifies proteins associated with progression. J Proteome Res 2008, 7:897-907.
    • (2008) J Proteome Res , vol.7 , pp. 897-907
    • Glen, A.1    Gan, C.S.2    Hamdy, F.C.3    Eaton, C.L.4    Cross, S.S.5    Catto, J.W.6
  • 63
    • 53049090352 scopus 로고    scopus 로고
    • Search for potential markers for prostate cancer diagnosis, prognosis and treatment in clinical tissue specimens using amine-specific isobaric tagging (iTRAQ) with two-dimensional liquid chromatography and tandem mass spectrometry
    • Garbis S.D., Tyritzis S.I., Roumeliotis T., Zerefos P., Giannopoulou E.G., Vlahou A., et al. Search for potential markers for prostate cancer diagnosis, prognosis and treatment in clinical tissue specimens using amine-specific isobaric tagging (iTRAQ) with two-dimensional liquid chromatography and tandem mass spectrometry. J Proteome Res 2008, 7:3146-3158.
    • (2008) J Proteome Res , vol.7 , pp. 3146-3158
    • Garbis, S.D.1    Tyritzis, S.I.2    Roumeliotis, T.3    Zerefos, P.4    Giannopoulou, E.G.5    Vlahou, A.6
  • 64
    • 12444345515 scopus 로고    scopus 로고
    • Tandem mass tags: a novel quantification strategy for comparative analysis of complex protein mixtures by MS/MS
    • Thompson A., Schafer J., Kuhn K., Kienle S., Schwarz J., Schmidt G., et al. Tandem mass tags: a novel quantification strategy for comparative analysis of complex protein mixtures by MS/MS. Anal Chem 2003, 75:1895-1904.
    • (2003) Anal Chem , vol.75 , pp. 1895-1904
    • Thompson, A.1    Schafer, J.2    Kuhn, K.3    Kienle, S.4    Schwarz, J.5    Schmidt, G.6
  • 65
    • 4043141477 scopus 로고    scopus 로고
    • Quantitative cancer proteomics: stable isotope labeling with amino acids in cell culture (SILAC) as a tool for prostate cancer research
    • Everley P.A., Krijgsveld J., Zetter B.R., Gygi S.P. Quantitative cancer proteomics: stable isotope labeling with amino acids in cell culture (SILAC) as a tool for prostate cancer research. Mol Cell Proteomics 2004, 3:729-735.
    • (2004) Mol Cell Proteomics , vol.3 , pp. 729-735
    • Everley, P.A.1    Krijgsveld, J.2    Zetter, B.R.3    Gygi, S.P.4
  • 66
    • 10744233766 scopus 로고    scopus 로고
    • Quantification of proteins and metabolites by mass spectrometry without isotopic labeling or spiked standards
    • Wang W., Zhou H., Lin H., Roy S., Shaler T.A., Hill L.R., et al. Quantification of proteins and metabolites by mass spectrometry without isotopic labeling or spiked standards. Anal Chem 2003, 75:4818-4826.
    • (2003) Anal Chem , vol.75 , pp. 4818-4826
    • Wang, W.1    Zhou, H.2    Lin, H.3    Roy, S.4    Shaler, T.A.5    Hill, L.R.6
  • 67
    • 14344250874 scopus 로고    scopus 로고
    • Informatics platform for global proteomic profiling and biomarker discovery using liquid chromatography-tandem mass spectrometry
    • Radulovic D., Jelveh S., Ryu S., Hamilton T.G., Foss E., Mao Y., et al. Informatics platform for global proteomic profiling and biomarker discovery using liquid chromatography-tandem mass spectrometry. Mol Cell Proteomics 2004, 3:984-997.
    • (2004) Mol Cell Proteomics , vol.3 , pp. 984-997
    • Radulovic, D.1    Jelveh, S.2    Ryu, S.3    Hamilton, T.G.4    Foss, E.5    Mao, Y.6
  • 68
    • 49749115277 scopus 로고    scopus 로고
    • Comparison of a label-free quantitative proteomic method based on peptide ion current area to the isotope coded affinity tag method
    • Ryu S., Gallis B., Goo Y.A., Shaffer S.A., Radulovic D., Goodlett D.R. Comparison of a label-free quantitative proteomic method based on peptide ion current area to the isotope coded affinity tag method. Cancer Inform 2008, 6:243-255.
    • (2008) Cancer Inform , vol.6 , pp. 243-255
    • Ryu, S.1    Gallis, B.2    Goo, Y.A.3    Shaffer, S.A.4    Radulovic, D.5    Goodlett, D.R.6
  • 69
    • 3242731195 scopus 로고    scopus 로고
    • A model for random sampling and estimation of relative protein abundance in shotgun proteomics
    • Liu H., Sadygov R.G., Yates J.R. A model for random sampling and estimation of relative protein abundance in shotgun proteomics. Anal Chem 2004, 76:4193-4201.
    • (2004) Anal Chem , vol.76 , pp. 4193-4201
    • Liu, H.1    Sadygov, R.G.2    Yates, J.R.3
  • 71
    • 12244270638 scopus 로고    scopus 로고
    • Differential proteomics via probabilistic peptide identification scores
    • Colinge J., Chiappe D., Lagache S., Moniatte M., Bougueleret L. Differential proteomics via probabilistic peptide identification scores. Anal Chem 2005, 77:596-606.
    • (2005) Anal Chem , vol.77 , pp. 596-606
    • Colinge, J.1    Chiappe, D.2    Lagache, S.3    Moniatte, M.4    Bougueleret, L.5
  • 72
    • 57049104077 scopus 로고    scopus 로고
    • Novel MMP-9 substrates in cancer cells revealed by a label-free quantitative proteomics approach
    • Xu D., Suenaga N., Edelmann M.J., Fridman R., Muschel R.J., Kessler B.M. Novel MMP-9 substrates in cancer cells revealed by a label-free quantitative proteomics approach. Mol Cell Proteomics 2008, 7:2215-2228.
    • (2008) Mol Cell Proteomics , vol.7 , pp. 2215-2228
    • Xu, D.1    Suenaga, N.2    Edelmann, M.J.3    Fridman, R.4    Muschel, R.J.5    Kessler, B.M.6
  • 73
    • 67449092269 scopus 로고    scopus 로고
    • Clinical quantitation of prostate-specific antigen biomarker in the low nanogram/milliliter range by conventional bore liquid chromatography-tandem mass spectrometry (multiple reaction monitoring) coupling and correlation with ELISA tests
    • Fortin T., Salvador A., Charrier J.P., Lenz C., Lacoux X., Morla A., et al. Clinical quantitation of prostate-specific antigen biomarker in the low nanogram/milliliter range by conventional bore liquid chromatography-tandem mass spectrometry (multiple reaction monitoring) coupling and correlation with ELISA tests. Mol Cell Proteomics 2009, 8:1006-1015.
    • (2009) Mol Cell Proteomics , vol.8 , pp. 1006-1015
    • Fortin, T.1    Salvador, A.2    Charrier, J.P.3    Lenz, C.4    Lacoux, X.5    Morla, A.6
  • 74
    • 77955425097 scopus 로고    scopus 로고
    • Validation of a total testosterone assay using high-turbulence liquid chromatography tandem mass spectrometry: total and free testosterone reference ranges
    • Salameh W.A., Redor-Goldman M.M., Clarke N.J., Reitz R.E., Caulfield M.P. Validation of a total testosterone assay using high-turbulence liquid chromatography tandem mass spectrometry: total and free testosterone reference ranges. Steroids 2009.
    • (2009) Steroids
    • Salameh, W.A.1    Redor-Goldman, M.M.2    Clarke, N.J.3    Reitz, R.E.4    Caulfield, M.P.5
  • 75
    • 60149111699 scopus 로고    scopus 로고
    • Diagnostics: the prostate-cancer metabolome
    • Abate-Shen C., Shen M.M. Diagnostics: the prostate-cancer metabolome. Nature News and Views 2009, 457:799-800.
    • (2009) Nature News and Views , vol.457 , pp. 799-800
    • Abate-Shen, C.1    Shen, M.M.2
  • 76
    • 60149091657 scopus 로고    scopus 로고
    • Metabolomic profiles delineate potential role for sarcosine in prostate cancer progression
    • Sreekumar A., Poisson L.M., Rajendiran T.M., Khan A.P., Cao Q., Yu J., et al. Metabolomic profiles delineate potential role for sarcosine in prostate cancer progression. Nature 2009, 457:910-914.
    • (2009) Nature , vol.457 , pp. 910-914
    • Sreekumar, A.1    Poisson, L.M.2    Rajendiran, T.M.3    Khan, A.P.4    Cao, Q.5    Yu, J.6
  • 78
    • 65249161129 scopus 로고    scopus 로고
    • Pathway-based biomarker search by high-throughput proteomics profiling of secretomes
    • Lawlor K., Nazarian A., Lacomis L., Tempst P., Villanueva J. Pathway-based biomarker search by high-throughput proteomics profiling of secretomes. J Proteome Res 2009, 8:1489-1503.
    • (2009) J Proteome Res , vol.8 , pp. 1489-1503
    • Lawlor, K.1    Nazarian, A.2    Lacomis, L.3    Tempst, P.4    Villanueva, J.5
  • 79
    • 70349446266 scopus 로고    scopus 로고
    • Proteomic interrogation of androgen action in prostate cancer cells reveals roles of aminoacyl tRNA synthetases
    • Vellaichamy A., Sreekumar A., Strahler J.R., Rajendiran T., Yu J., Varambally S., et al. Proteomic interrogation of androgen action in prostate cancer cells reveals roles of aminoacyl tRNA synthetases. PLoS One 2009, 4:e7075.
    • (2009) PLoS One , vol.4
    • Vellaichamy, A.1    Sreekumar, A.2    Strahler, J.R.3    Rajendiran, T.4    Yu, J.5    Varambally, S.6
  • 80
    • 13444280261 scopus 로고    scopus 로고
    • Protein microarrays as tools for functional proteomics
    • LaBaer J., Ramachandran N. Protein microarrays as tools for functional proteomics. Curr Opin Chem Biol 2005, 9:14-19.
    • (2005) Curr Opin Chem Biol , vol.9 , pp. 14-19
    • LaBaer, J.1    Ramachandran, N.2
  • 82
    • 0038561131 scopus 로고    scopus 로고
    • A method for the comprehensive proteomic analysis of membrane proteins
    • Wu C.C., MacCoss M.J., Howell K.E., Yates J.R. A method for the comprehensive proteomic analysis of membrane proteins. Nat Biotechnol 2003, 21:532-538.
    • (2003) Nat Biotechnol , vol.21 , pp. 532-538
    • Wu, C.C.1    MacCoss, M.J.2    Howell, K.E.3    Yates, J.R.4
  • 83
    • 33646546999 scopus 로고    scopus 로고
    • Application of mass spectrometry to the discovery of biomarkers for detection of prostate cancer
    • Semmes O.J., Malik G., Ward M. Application of mass spectrometry to the discovery of biomarkers for detection of prostate cancer. J Cell Biochem 2006, 98:496-503.
    • (2006) J Cell Biochem , vol.98 , pp. 496-503
    • Semmes, O.J.1    Malik, G.2    Ward, M.3
  • 84
    • 35848949043 scopus 로고    scopus 로고
    • Decoding protein modifications using top-down mass spectrometry
    • Siuti N., Kelleher N.L. Decoding protein modifications using top-down mass spectrometry. Nat Methods 2007, 4:817-821.
    • (2007) Nat Methods , vol.4 , pp. 817-821
    • Siuti, N.1    Kelleher, N.L.2
  • 87
    • 77953397764 scopus 로고    scopus 로고
    • Systems medicine: the future of medical genomics and healthcare
    • Auffray C., Chen Z., Hood L. Systems medicine: the future of medical genomics and healthcare. Genome Med 2009, 1:2.
    • (2009) Genome Med , vol.1 , pp. 2
    • Auffray, C.1    Chen, Z.2    Hood, L.3
  • 88
    • 59149098946 scopus 로고    scopus 로고
    • Report on EU-USA workshop: how systems biology can advance cancer research (27 October 2008)
    • Aebersold R., Auffray C., Baney E., Barillot E., Brazma A., Brett C., et al. Report on EU-USA workshop: how systems biology can advance cancer research (27 October 2008). Mol Oncol 2009, 3:9-17.
    • (2009) Mol Oncol , vol.3 , pp. 9-17
    • Aebersold, R.1    Auffray, C.2    Baney, E.3    Barillot, E.4    Brazma, A.5    Brett, C.6


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