-
1
-
-
33947308285
-
How is pluripotency determined and maintained?
-
Niwa H, (2007) How is pluripotency determined and maintained? Development 134: 635-646.
-
(2007)
Development
, vol.134
, pp. 635-646
-
-
Niwa, H.1
-
2
-
-
29744447772
-
Hyperdynamic plasticity of chromatin proteins in pluripotent embryonic stem cells
-
Meshorer E, Yellajoshula D, George E, Scambler PJ, Brown DT, et al. (2006) Hyperdynamic plasticity of chromatin proteins in pluripotent embryonic stem cells. Dev Cell 10: 105-116.
-
(2006)
Dev Cell
, vol.10
, pp. 105-116
-
-
Meshorer, E.1
Yellajoshula, D.2
George, E.3
Scambler, P.J.4
Brown, D.T.5
-
3
-
-
68049097008
-
Epigenetic dynamics of stem cells and cell lineage commitment: digging Waddington's canal
-
Hemberger M, Dean W, Reik W, (2009) Epigenetic dynamics of stem cells and cell lineage commitment: digging Waddington's canal. Nat Rev Mol Cell Bio 10: 526-537.
-
(2009)
Nat Rev Mol Cell Bio
, vol.10
, pp. 526-537
-
-
Hemberger, M.1
Dean, W.2
Reik, W.3
-
4
-
-
77949334637
-
ATP dependent chromatin remodeling enzymes in embryonic stem cells
-
Saladi SV, de la Serna IL, (2010) ATP dependent chromatin remodeling enzymes in embryonic stem cells. Stem Cell Rev 6: 62-73.
-
(2010)
Stem Cell Rev
, vol.6
, pp. 62-73
-
-
Saladi, S.V.1
de la Serna, I.L.2
-
5
-
-
77953727663
-
Chromatin-Remodeling Components of the BAF Complex Facilitate Reprogramming
-
Singhal N, Graumann J, Wu G, Arauzo-Bravo MJ, Han DW, et al. (2010) Chromatin-Remodeling Components of the BAF Complex Facilitate Reprogramming. Cell 141: 943-955.
-
(2010)
Cell
, vol.141
, pp. 943-955
-
-
Singhal, N.1
Graumann, J.2
Wu, G.3
Arauzo-Bravo, M.J.4
Han, D.W.5
-
7
-
-
69249154260
-
Stability of histone modifications across mammalian genomes: implications for 'epigenetic' marking
-
Lee BM, Mahadevan LC, (2009) Stability of histone modifications across mammalian genomes: implications for 'epigenetic' marking. J Cell Biochem 108: 22-34.
-
(2009)
J Cell Biochem
, vol.108
, pp. 22-34
-
-
Lee, B.M.1
Mahadevan, L.C.2
-
8
-
-
33745865934
-
Chromatin in pluripotent embryonic stem cells and differentiation
-
Meshorer E, Misteli T, (2006) Chromatin in pluripotent embryonic stem cells and differentiation. Nat Rev Mol Cell Bio 7: 540-546.
-
(2006)
Nat Rev Mol Cell Bio
, vol.7
, pp. 540-546
-
-
Meshorer, E.1
Misteli, T.2
-
9
-
-
9944228800
-
Distinct dynamics and distribution of histone methyl-lysine derivatives in mouse development
-
Biron VL, McManus KJ, Hu N, Hendzel MJ, Underhill DA, (2004) Distinct dynamics and distribution of histone methyl-lysine derivatives in mouse development. Dev Biol 276: 337-351.
-
(2004)
Dev Biol
, vol.276
, pp. 337-351
-
-
Biron, V.L.1
McManus, K.J.2
Hu, N.3
Hendzel, M.J.4
Underhill, D.A.5
-
10
-
-
0038243168
-
The role of DNA methylation in setting up chromatin structure during development
-
Hashimshony T, Zhang J, Keshet I, Bustin M, Cedar H, (2003) The role of DNA methylation in setting up chromatin structure during development. Nat Genet 34: 187-192.
-
(2003)
Nat Genet
, vol.34
, pp. 187-192
-
-
Hashimshony, T.1
Zhang, J.2
Keshet, I.3
Bustin, M.4
Cedar, H.5
-
11
-
-
1042302747
-
Histone deacetylase activity is required for embryonic stem cell differentiation
-
Lee JH, Hart SR, Skalnik DG, (2004) Histone deacetylase activity is required for embryonic stem cell differentiation. Genesis 38: 32-38.
-
(2004)
Genesis
, vol.38
, pp. 32-38
-
-
Lee, J.H.1
Hart, S.R.2
Skalnik, D.G.3
-
12
-
-
69949156902
-
A hierarchy of H3K4me3 and H3K27me3 acquisition in spatial gene regulation in Xenopus embryos
-
Akkers RC, van Heeringen SJ, Jacobi UG, Janssen-Megens EM, Francoijs KJ, et al. (2009) A hierarchy of H3K4me3 and H3K27me3 acquisition in spatial gene regulation in Xenopus embryos. Dev Cell 17: 425-434.
-
(2009)
Dev Cell
, vol.17
, pp. 425-434
-
-
Akkers, R.C.1
van Heeringen, S.J.2
Jacobi, U.G.3
Janssen-Megens, E.M.4
Francoijs, K.J.5
-
13
-
-
79960696358
-
Stage-specific histone modification profiles reveal global transitions in the Xenopus embryonic epigenome
-
doi:10.1371/journal.pone.0022548
-
Schneider TD, Arteaga-Salas JM, Mentele E, David R, Nicetto D, et al. (2011) Stage-specific histone modification profiles reveal global transitions in the Xenopus embryonic epigenome. PLoS ONE 6: e22548 doi:10.1371/journal.pone.0022548.
-
(2011)
PLoS ONE
, vol.6
-
-
Schneider, T.D.1
Arteaga-Salas, J.M.2
Mentele, E.3
David, R.4
Nicetto, D.5
-
14
-
-
77950866717
-
Chromatin signature of embryonic pluripotency is established during genome activation
-
Vastenhouw NL, Zhang Y, Woods IG, Imam F, Regev A, et al. (2010) Chromatin signature of embryonic pluripotency is established during genome activation. Nature 464: 922-926.
-
(2010)
Nature
, vol.464
, pp. 922-926
-
-
Vastenhouw, N.L.1
Zhang, Y.2
Woods, I.G.3
Imam, F.4
Regev, A.5
-
15
-
-
35848951163
-
Covalent modifications of histones during development and disease pathogenesis
-
Bhaumik SR, Smith E, Shilatifard A, (2007) Covalent modifications of histones during development and disease pathogenesis. Nat Struct Mol Biol 14: 1008-1016.
-
(2007)
Nat Struct Mol Biol
, vol.14
, pp. 1008-1016
-
-
Bhaumik, S.R.1
Smith, E.2
Shilatifard, A.3
-
16
-
-
77953807332
-
Epigenetic regulation of development by histone lysine methylation
-
Dambacher S, Hahn M, Schotta G, (2010) Epigenetic regulation of development by histone lysine methylation. Heredity 105: 24-37.
-
(2010)
Heredity
, vol.105
, pp. 24-37
-
-
Dambacher, S.1
Hahn, M.2
Schotta, G.3
-
17
-
-
33646882068
-
Polycomb complexes repress developmental regulators in murine embryonic stem cells
-
Boyer LA, Plath K, Zeitlinger J, Brambrink T, Medeiros LA, et al. (2006) Polycomb complexes repress developmental regulators in murine embryonic stem cells. Nature 441: 349-353.
-
(2006)
Nature
, vol.441
, pp. 349-353
-
-
Boyer, L.A.1
Plath, K.2
Zeitlinger, J.3
Brambrink, T.4
Medeiros, L.A.5
-
18
-
-
1942503942
-
The functions of E(Z)/EZH2-mediated methylation of lysine 27 in histone H3
-
Cao R, Zhang Y, (2004) The functions of E(Z)/EZH2-mediated methylation of lysine 27 in histone H3. Curr Opin Genet Dev 14: 155-164.
-
(2004)
Curr Opin Genet Dev
, vol.14
, pp. 155-164
-
-
Cao, R.1
Zhang, Y.2
-
19
-
-
78149316177
-
Epigenetic control of embryonic stem cell fate
-
Christophersen NS, Helin K, (2010) Epigenetic control of embryonic stem cell fate. J Exp Med 207: 2287-2295.
-
(2010)
J Exp Med
, vol.207
, pp. 2287-2295
-
-
Christophersen, N.S.1
Helin, K.2
-
20
-
-
0034632829
-
Regulation of chromatin structure by site-specific histone H3 methyltransferases
-
Rea S, Eisenhaber F, O'Carroll D, Strahl BD, Sun ZW, et al. (2000) Regulation of chromatin structure by site-specific histone H3 methyltransferases. Nature 406: 593-599.
-
(2000)
Nature
, vol.406
, pp. 593-599
-
-
Rea, S.1
Eisenhaber, F.2
O'Carroll, D.3
Strahl, B.D.4
Sun, Z.W.5
-
21
-
-
2642542643
-
A silencing pathway to induce H3-K9 and H4-K20 trimethylation at constitutive heterochromatin
-
Schotta G, Lachner M, Sarma K, Ebert A, Sengupta R, et al. (2004) A silencing pathway to induce H3-K9 and H4-K20 trimethylation at constitutive heterochromatin. Gene Dev 18: 1251-1262.
-
(2004)
Gene Dev
, vol.18
, pp. 1251-1262
-
-
Schotta, G.1
Lachner, M.2
Sarma, K.3
Ebert, A.4
Sengupta, R.5
-
22
-
-
0037099413
-
G9a histone methyltransferase plays a dominant role in euchromatic histone H3 lysine 9 methylation and is essential for early embryogenesis
-
Tachibana M, Sugimoto K, Nozaki M, Ueda J, Ohta T, et al. (2002) G9a histone methyltransferase plays a dominant role in euchromatic histone H3 lysine 9 methylation and is essential for early embryogenesis. Gene Dev 16: 1779-1791.
-
(2002)
Gene Dev
, vol.16
, pp. 1779-1791
-
-
Tachibana, M.1
Sugimoto, K.2
Nozaki, M.3
Ueda, J.4
Ohta, T.5
-
23
-
-
0037012042
-
Molecular cloning of ESET, a novel histone H3-specific methyltransferase that interacts with ERG transcription factor
-
Yang L, Xia L, Wu DY, Wang H, Chansky HA, et al. (2002) Molecular cloning of ESET, a novel histone H3-specific methyltransferase that interacts with ERG transcription factor. Oncogene 21: 148-152.
-
(2002)
Oncogene
, vol.21
, pp. 148-152
-
-
Yang, L.1
Xia, L.2
Wu, D.Y.3
Wang, H.4
Chansky, H.A.5
-
24
-
-
48749102722
-
A chromatin-wide transition to H4K20 monomethylation impairs genome integrity and programmed DNA rearrangements in the mouse
-
Schotta G, Sengupta R, Kubicek S, Malin S, Kauer M, et al. (2008) A chromatin-wide transition to H4K20 monomethylation impairs genome integrity and programmed DNA rearrangements in the mouse. Gene Dev 22: 2048-2061.
-
(2008)
Gene Dev
, vol.22
, pp. 2048-2061
-
-
Schotta, G.1
Sengupta, R.2
Kubicek, S.3
Malin, S.4
Kauer, M.5
-
25
-
-
23944509075
-
The SET-domain protein superfamily: protein lysine methyltransferases
-
Dillon SC, Zhang X, Trievel RC, Cheng X, (2005) The SET-domain protein superfamily: protein lysine methyltransferases. Genome Biol 6: 227.
-
(2005)
Genome Biol
, vol.6
, pp. 227
-
-
Dillon, S.C.1
Zhang, X.2
Trievel, R.C.3
Cheng, X.4
-
26
-
-
0037439085
-
Mechanism of histone lysine methyl transfer revealed by the structure of SET7/9-AdoMet
-
Kwon T, Chang JH, Kwak E, Lee CW, Joachimiak A, et al. (2003) Mechanism of histone lysine methyl transfer revealed by the structure of SET7/9-AdoMet. EMBO J 22: 292-303.
-
(2003)
EMBO J
, vol.22
, pp. 292-303
-
-
Kwon, T.1
Chang, J.H.2
Kwak, E.3
Lee, C.W.4
Joachimiak, A.5
-
27
-
-
70349409319
-
Neural induction and factors that stabilize a neural fate
-
Rogers CD, Moody SA, Casey ES, (2009) Neural induction and factors that stabilize a neural fate. Birth defects research Part C, Embryo today: reviews 87: 249-262.
-
(2009)
Birth Defects Research Part C, Embryo Today: Reviews
, vol.87
, pp. 249-262
-
-
Rogers, C.D.1
Moody, S.A.2
Casey, E.S.3
-
28
-
-
0025726745
-
Neuronal determination without cell division in Xenopus embryos
-
Harris WA, Hartenstein V, (1991) Neuronal determination without cell division in Xenopus embryos. Neuron 6: 499-515.
-
(1991)
Neuron
, vol.6
, pp. 499-515
-
-
Harris, W.A.1
Hartenstein, V.2
-
29
-
-
0026601294
-
Sequential expression of multiple POU proteins during amphibian early development
-
Hinkley CS, Martin JF, Leibham D, Perry M, (1992) Sequential expression of multiple POU proteins during amphibian early development. Mol Cell Biol 12: 638-649.
-
(1992)
Mol Cell Biol
, vol.12
, pp. 638-649
-
-
Hinkley, C.S.1
Martin, J.F.2
Leibham, D.3
Perry, M.4
-
30
-
-
33745107507
-
Conserved roles for Oct4 homologues in maintaining multipotency during early vertebrate development
-
Morrison GM, Brickman JM, (2006) Conserved roles for Oct4 homologues in maintaining multipotency during early vertebrate development. Development 133: 2011-2022.
-
(2006)
Development
, vol.133
, pp. 2011-2022
-
-
Morrison, G.M.1
Brickman, J.M.2
-
31
-
-
6344294308
-
The POU factor Oct-25 regulates the Xvent-2B gene and counteracts terminal differentiation in Xenopus embryos
-
Cao Y, Knochel S, Donow C, Miethe J, Kaufmann E, et al. (2004) The POU factor Oct-25 regulates the Xvent-2B gene and counteracts terminal differentiation in Xenopus embryos. J Biol Chem 279: 43735-43743.
-
(2004)
J Biol Chem
, vol.279
, pp. 43735-43743
-
-
Cao, Y.1
Knochel, S.2
Donow, C.3
Miethe, J.4
Kaufmann, E.5
-
32
-
-
57749116038
-
Oct25 represses transcription of nodal/activin target genes by interaction with signal transducers during Xenopus gastrulation
-
Cao Y, Siegel D, Oswald F, Knochel W, (2008) Oct25 represses transcription of nodal/activin target genes by interaction with signal transducers during Xenopus gastrulation. J Biol Chem 283: 34168-34177.
-
(2008)
J Biol Chem
, vol.283
, pp. 34168-34177
-
-
Cao, Y.1
Siegel, D.2
Oswald, F.3
Knochel, W.4
-
33
-
-
33747626355
-
Xenopus laevis POU91 protein, an Oct3/4 homologue, regulates competence transitions from mesoderm to neural cell fates
-
Snir M, Ofir R, Elias S, Frank D, (2006) Xenopus laevis POU91 protein, an Oct3/4 homologue, regulates competence transitions from mesoderm to neural cell fates. EMBO J 25: 3664-3674.
-
(2006)
EMBO J
, vol.25
, pp. 3664-3674
-
-
Snir, M.1
Ofir, R.2
Elias, S.3
Frank, D.4
-
34
-
-
35748972972
-
The Xenopus POU class V transcription factor XOct-25 inhibits ectodermal competence to respond to bone morphogenetic protein-mediated embryonic induction
-
Takebayashi-Suzuki K, Arita N, Murasaki E, Suzuki A, (2007) The Xenopus POU class V transcription factor XOct-25 inhibits ectodermal competence to respond to bone morphogenetic protein-mediated embryonic induction. Mech Develop 124: 840-855.
-
(2007)
Mech Develop
, vol.124
, pp. 840-855
-
-
Takebayashi-Suzuki, K.1
Arita, N.2
Murasaki, E.3
Suzuki, A.4
-
35
-
-
77951823093
-
The genome of the Western clawed frog Xenopus tropicalis
-
Hellsten U, Harland RM, Gilchrist MJ, Hendrix D, Jurka J, et al. (2010) The genome of the Western clawed frog Xenopus tropicalis. Science 328: 633-636.
-
(2010)
Science
, vol.328
, pp. 633-636
-
-
Hellsten, U.1
Harland, R.M.2
Gilchrist, M.J.3
Hendrix, D.4
Jurka, J.5
-
36
-
-
34249026300
-
High-resolution profiling of histone methylations in the human genome
-
Barski A, Cuddapah S, Cui K, Roh TY, Schones DE, et al. (2007) High-resolution profiling of histone methylations in the human genome. Cell 129: 823-837.
-
(2007)
Cell
, vol.129
, pp. 823-837
-
-
Barski, A.1
Cuddapah, S.2
Cui, K.3
Roh, T.Y.4
Schones, D.E.5
-
37
-
-
34547624303
-
Genome-wide maps of chromatin state in pluripotent and lineage-committed cells
-
Mikkelsen TS, Ku M, Jaffe DB, Issac B, Lieberman E, et al. (2007) Genome-wide maps of chromatin state in pluripotent and lineage-committed cells. Nature 448: 553-560.
-
(2007)
Nature
, vol.448
, pp. 553-560
-
-
Mikkelsen, T.S.1
Ku, M.2
Jaffe, D.B.3
Issac, B.4
Lieberman, E.5
-
38
-
-
25144525014
-
Core transcriptional regulatory circuitry in human embryonic stem cells
-
Boyer LA, Lee TI, Cole MF, Johnstone SE, Levine SS, et al. (2005) Core transcriptional regulatory circuitry in human embryonic stem cells. Cell 122: 947-956.
-
(2005)
Cell
, vol.122
, pp. 947-956
-
-
Boyer, L.A.1
Lee, T.I.2
Cole, M.F.3
Johnstone, S.E.4
Levine, S.S.5
-
39
-
-
0036546980
-
Neural induction, the default model and embryonic stem cells
-
Munoz-Sanjuan I, Brivanlou AH, (2002) Neural induction, the default model and embryonic stem cells. Nat Rev Neurosci 3: 271-280.
-
(2002)
Nat Rev Neurosci
, vol.3
, pp. 271-280
-
-
Munoz-Sanjuan, I.1
Brivanlou, A.H.2
-
40
-
-
33747892602
-
Xenopus POU factors of subclass V inhibit activin/nodal signaling during gastrulation
-
Cao Y, Siegel D, Knochel W, (2006) Xenopus POU factors of subclass V inhibit activin/nodal signaling during gastrulation. Mech Develop 123: 614-625.
-
(2006)
Mech Develop
, vol.123
, pp. 614-625
-
-
Cao, Y.1
Siegel, D.2
Knochel, W.3
-
41
-
-
79551592864
-
Pluripotency factors regulate definitive endoderm specification through eomesodermin
-
Teo AK, Arnold SJ, Trotter MW, Brown S, Ang LT, et al. (2011) Pluripotency factors regulate definitive endoderm specification through eomesodermin. Gene Dev 25: 238-250.
-
(2011)
Gene Dev
, vol.25
, pp. 238-250
-
-
Teo, A.K.1
Arnold, S.J.2
Trotter, M.W.3
Brown, S.4
Ang, L.T.5
-
42
-
-
79958263080
-
Pluripotency factors in embryonic stem cells regulate differentiation into germ layers
-
Thomson M, Liu SJ, Zou LN, Smith Z, Meissner A, et al. (2011) Pluripotency factors in embryonic stem cells regulate differentiation into germ layers. Cell 145: 875-889.
-
(2011)
Cell
, vol.145
, pp. 875-889
-
-
Thomson, M.1
Liu, S.J.2
Zou, L.N.3
Smith, Z.4
Meissner, A.5
-
43
-
-
40249093060
-
MesP1 drives vertebrate cardiovascular differentiation through Dkk-1-mediated blockade of Wnt-signalling
-
David R, Brenner C, Stieber J, Schwarz F, Brunner S, et al. (2008) MesP1 drives vertebrate cardiovascular differentiation through Dkk-1-mediated blockade of Wnt-signalling. Nature Cell Biol 10: 338-345.
-
(2008)
Nature Cell Biol
, vol.10
, pp. 338-345
-
-
David, R.1
Brenner, C.2
Stieber, J.3
Schwarz, F.4
Brunner, S.5
-
44
-
-
79953131815
-
SUV420H2-mediated H4K20 trimethylation enforces RNA polymerase II promoter-proximal pausing by blocking hMOF-dependent H4K16 acetylation
-
Kapoor-Vazirani P, Kagey JD, Vertino PM, (2011) SUV420H2-mediated H4K20 trimethylation enforces RNA polymerase II promoter-proximal pausing by blocking hMOF-dependent H4K16 acetylation. Mol Cell Biol 31: 1594-1609.
-
(2011)
Mol Cell Biol
, vol.31
, pp. 1594-1609
-
-
Kapoor-Vazirani, P.1
Kagey, J.D.2
Vertino, P.M.3
-
45
-
-
79955854161
-
An epigenetic signature for monoallelic olfactory receptor expression
-
Magklara A, Yen A, Colquitt BM, Clowney EJ, Allen W, et al. (2011) An epigenetic signature for monoallelic olfactory receptor expression. Cell 145: 555-570.
-
(2011)
Cell
, vol.145
, pp. 555-570
-
-
Magklara, A.1
Yen, A.2
Colquitt, B.M.3
Clowney, E.J.4
Allen, W.5
-
46
-
-
84862174297
-
Histone h1 depletion impairs embryonic stem cell differentiation
-
doi:10.1371/journal.pgen.1002691
-
Zhang Y, Cooke M, Panjwani S, Cao K, Krauth B, et al. (2012) Histone h1 depletion impairs embryonic stem cell differentiation. PLoS Genet 8: e1002691 doi:10.1371/journal.pgen.1002691.
-
(2012)
PLoS Genet
, vol.8
-
-
Zhang, Y.1
Cooke, M.2
Panjwani, S.3
Cao, K.4
Krauth, B.5
-
47
-
-
79952762476
-
Histone H4 Lys 20 monomethylation by histone methylase SET8 mediates Wnt target gene activation
-
Li Z, Nie F, Wang S, Li L, (2011) Histone H4 Lys 20 monomethylation by histone methylase SET8 mediates Wnt target gene activation. P Natl Acad Sci USA 108: 3116-3123.
-
(2011)
P Natl Acad Sci USA
, vol.108
, pp. 3116-3123
-
-
Li, Z.1
Nie, F.2
Wang, S.3
Li, L.4
-
48
-
-
0029917815
-
Xenopus Xsal-1, a vertebrate homolog of the region specific homeotic gene spalt of Drosophila
-
Hollemann T, Schuh R, Pieler T, Stick R, (1996) Xenopus Xsal-1, a vertebrate homolog of the region specific homeotic gene spalt of Drosophila. Mech of Develop 55: 19-32.
-
(1996)
Mech of Develop
, vol.55
, pp. 19-32
-
-
Hollemann, T.1
Schuh, R.2
Pieler, T.3
Stick, R.4
-
49
-
-
66349110246
-
Chromatin immunoprecipitation in early Xenopus laevis embryos
-
Blythe SA, Reid CD, Kessler DS, Klein PS, (2009) Chromatin immunoprecipitation in early Xenopus laevis embryos. Dev Dynam 238: 1422-1432.
-
(2009)
Dev Dynam
, vol.238
, pp. 1422-1432
-
-
Blythe, S.A.1
Reid, C.D.2
Kessler, D.S.3
Klein, P.S.4
|