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Volumn 110, Issue 6, 2013, Pages

A resurrected mammalian hAT transposable element and a closely related insect element are highly active in human cell culture

Author keywords

Gene therapy; HAT element; Insertional mutagenesis; Target site selection; Transgenesis

Indexed keywords

PLASMID DNA;

EID: 84873450062     PISSN: 00278424     EISSN: 10916490     Source Type: Journal    
DOI: 10.1073/pnas.1121543109     Document Type: Article
Times cited : (51)

References (58)
  • 1
    • 79251581868 scopus 로고    scopus 로고
    • A brief history of the status of transposable elements: From junk DNA to major players in evolution
    • Biémont C (2010) A brief history of the status of transposable elements: From junk DNA to major players in evolution. Genetics 186:1085-1093.
    • (2010) Genetics , vol.186 , pp. 1085-1093
    • Biémont, C.1
  • 2
    • 2042437650 scopus 로고    scopus 로고
    • Initial sequencing and analysis of the human genome
    • Lander ES, et al. (2001) Initial sequencing and analysis of the human genome. Nature 409:860-921.
    • (2001) Nature , vol.409 , pp. 860-921
    • Lander, E.S.1
  • 3
    • 70450202132 scopus 로고    scopus 로고
    • The B73 maize genome: Complexity, diversity, and dynamics
    • Schnable PS, et al. (2009) The B73 maize genome: Complexity, diversity, and dynamics. Science 326:1112-1115.
    • (2009) Science , vol.326 , pp. 1112-1115
    • Schnable, P.S.1
  • 4
    • 77956668327 scopus 로고    scopus 로고
    • Translating sleeping beauty transposition into cellular therapies: Victories and challenges
    • Izsvák Z, Hackett PB, Cooper LJ, Ivics Z (2010) Translating Sleeping Beauty transposition into cellular therapies: Victories and challenges. Bioessays 32:756-767.
    • (2010) Bioessays , vol.32 , pp. 756-767
    • Izsvák, Z.1    Hackett, P.B.2    Cooper, L.J.3    Ivics, Z.4
  • 5
    • 77951977096 scopus 로고    scopus 로고
    • Gene therapy vectors: The prospects and potentials of the cut-and-paste transposons
    • Claeys Bouuaert C, Chalmers RM (2010) Gene therapy vectors: The prospects and potentials of the cut-and-paste transposons. Genetica 138:473-484.
    • (2010) Genetica , vol.138 , pp. 473-484
    • Claeys Bouuaert, C.1    Chalmers, R.M.2
  • 6
    • 79954952409 scopus 로고    scopus 로고
    • The expanding universe of transposon technologies for gene and cell engineering
    • Ivics Z, Izsvak Z (2010) The expanding universe of transposon technologies for gene and cell engineering. Mob DNA 1:25.
    • (2010) Mob DNA , vol.1 , pp. 25
    • Ivics, Z.1    Izsvak, Z.2
  • 7
    • 38449110499 scopus 로고    scopus 로고
    • Tol2: A versatile gene transfer vector in vertebrates
    • Kawakami K (2007) Tol2: A versatile gene transfer vector in vertebrates. Genome Biol 8(Suppl 1):S7.
    • (2007) Genome Biol , vol.8 , Issue.SUPPL. 1
    • Kawakami, K.1
  • 8
    • 79959772184 scopus 로고    scopus 로고
    • Size matters: Versatile use of PiggyBac transposons as a genetic manipulation tool
    • Kim A, Pyykko I (2011) Size matters: Versatile use of PiggyBac transposons as a genetic manipulation tool. Mol Cell Biochem 354:301-309.
    • (2011) Mol Cell Biochem , vol.354 , pp. 301-309
    • Kim, A.1    Pyykko, I.2
  • 9
    • 0034682335 scopus 로고    scopus 로고
    • Lateral gene transfer and the nature of bacterial innovation
    • Ochman H, Lawrence JG, Groisman EA (2000) Lateral gene transfer and the nature of bacterial innovation. Nature 405:299-304.
    • (2000) Nature , vol.405 , pp. 299-304
    • Ochman, H.1    Lawrence, J.G.2    Groisman, E.A.3
  • 10
    • 23944499633 scopus 로고    scopus 로고
    • Horizontal gene transfer, genome innovation and evolution
    • Gogarten JPTJ, Townsend JP (2005) Horizontal gene transfer, genome innovation and evolution. Nat Rev Microbiol 3:679-687.
    • (2005) Nat Rev Microbiol , vol.3 , pp. 679-687
    • Gogarten, J.P.T.J.1    Townsend, J.P.2
  • 11
    • 77955658052 scopus 로고    scopus 로고
    • Promiscuous DNA: Horizontal transfer of transposable elements and why it matters for eukaryotic evolution
    • Schaack S, Gilbert C, Feschotte C (2010) Promiscuous DNA: Horizontal transfer of transposable elements and why it matters for eukaryotic evolution. Trends Ecol Evol 25:537-546.
    • (2010) Trends Ecol Evol , vol.25 , pp. 537-546
    • Schaack, S.1    Gilbert, C.2    Feschotte, C.3
  • 12
    • 55949134735 scopus 로고    scopus 로고
    • Repeated horizontal transfer of a DNA transposon in mammals and other tetrapods
    • Pace JK, 2nd, Gilbert C, Clark MS, Feschotte C (2008) Repeated horizontal transfer of a DNA transposon in mammals and other tetrapods. Proc Natl Acad Sci USA 105: 17023-17028.
    • (2008) Proc Natl Acad Sci USA , vol.105 , pp. 17023-17028
    • Pace II, J.K.1    Gilbert, C.2    Clark, M.S.3    Feschotte, C.4
  • 13
    • 77951778552 scopus 로고    scopus 로고
    • A role for hostparasite interactions in the horizontal transfer of transposons across phyla
    • Gilbert C, Schaack S, Pace JK 2nd, Brindley PJ, Feschotte C (2010) A role for hostparasite interactions in the horizontal transfer of transposons across phyla. Nature 464:1347-1350.
    • (2010) Nature , vol.464 , pp. 1347-1350
    • Gilbert, C.1    Schaack, S.2    Pace II, J.K.3    Brindley, P.J.4    Feschotte, C.5
  • 15
    • 70350411861 scopus 로고    scopus 로고
    • Independent and parallel lateral transfer of DNA transposons in tetrapod genomes
    • Novick P, Smith J, Ray D, Boissinot S (2010) Independent and parallel lateral transfer of DNA transposons in tetrapod genomes. Gene 449:85-94.
    • (2010) Gene , vol.449 , pp. 85-94
    • Novick, P.1    Smith, J.2    Ray, D.3    Boissinot, S.4
  • 16
    • 79955938975 scopus 로고    scopus 로고
    • Phylogenetic and functional characterization of the hAT transposon superfamily
    • Arensburger P, et al. (2011) Phylogenetic and functional characterization of the hAT transposon superfamily. Genetics 188:45-57.
    • (2011) Genetics , vol.188 , pp. 45-57
    • Arensburger, P.1
  • 17
    • 0032784908 scopus 로고    scopus 로고
    • Interspersed repeats and other mementos of transposable elements in mammalian genomes
    • Smit AF (1999) Interspersed repeats and other mementos of transposable elements in mammalian genomes. Curr Opin Genet Dev 9:657-663.
    • (1999) Curr Opin Genet Dev , vol.9 , pp. 657-663
    • Smit, A.F.1
  • 18
    • 0030662074 scopus 로고    scopus 로고
    • Molecular reconstruction of Sleeping Beauty, a Tc1-like transposon from fish, and its transposition in human cells
    • Ivics Z, Hackett PB, Plasterk RH, Izsvák Z (1997)Molecular reconstruction of Sleeping Beauty, a Tc1-like transposon from fish, and its transposition in human cells. Cell 91:501-510.
    • (1997) Cell , vol.91 , pp. 501-510
    • Ivics, Z.1    Hackett, P.B.2    Plasterk, R.H.3    Izsvák, Z.4
  • 19
    • 28444479786 scopus 로고    scopus 로고
    • Hyperactive transposase mutants of the Sleeping Beauty transposon
    • Baus J, Liu L, Heggestad AD, Sanz S, Fletcher BS (2005) Hyperactive transposase mutants of the Sleeping Beauty transposon. Mol Ther 12:1148-1156.
    • (2005) Mol Ther , vol.12 , pp. 1148-1156
    • Baus, J.1    Liu, L.2    Heggestad, A.D.3    Sanz, S.4    Fletcher, B.S.5
  • 20
  • 22
    • 77957579849 scopus 로고    scopus 로고
    • Gene transfer efficiency and genome-wide integration profiling of Sleeping Beauty, Tol2, and piggyBac transposons in human primary T cells
    • Huang X, et al. (2010) Gene transfer efficiency and genome-wide integration profiling of Sleeping Beauty, Tol2, and piggyBac transposons in human primary T cells. Mol Ther 18:1803-1813.
    • (2010) Mol Ther , vol.18 , pp. 1803-1813
    • Huang, X.1
  • 23
    • 70349673723 scopus 로고    scopus 로고
    • Genome-wide mapping of PiggyBac transposon integrations in primary human T cells
    • Galvan DL, et al. (2009) Genome-wide mapping of PiggyBac transposon integrations in primary human T cells. J Immunother 32:837-844.
    • (2009) J Immunother , vol.32 , pp. 837-844
    • Galvan, D.L.1
  • 24
    • 14844355218 scopus 로고    scopus 로고
    • High-resolution genome-wide mapping of transposon integration in mammals
    • Yant SR, et al. (2005) High-resolution genome-wide mapping of transposon integration in mammals. Mol Cell Biol 25:2085-2094.
    • (2005) Mol Cell Biol , vol.25 , pp. 2085-2094
    • Yant, S.R.1
  • 25
    • 0036404918 scopus 로고    scopus 로고
    • Common physical properties of DNA affecting target site selection of sleeping beauty and other Tc1/mariner transposable elements
    • Vigdal TJ, Kaufman CD, Izsvák Z, Voytas DF, Ivics Z (2002) Common physical properties of DNA affecting target site selection of sleeping beauty and other Tc1/mariner transposable elements. J Mol Biol 323:441-452.
    • (2002) J Mol Biol , vol.323 , pp. 441-452
    • Vigdal, T.J.1    Kaufman, C.D.2    Izsvák, Z.3    Voytas, D.F.4    Ivics, Z.5
  • 26
  • 27
    • 33745684269 scopus 로고    scopus 로고
    • Retroviral DNA integration: Viral and cellular determinants of target-site selection
    • Lewinski MK, et al. (2006) Retroviral DNA integration: Viral and cellular determinants of target-site selection. PLoS Pathog 2:e60.
    • (2006) PLoS Pathog , vol.2
    • Lewinski, M.K.1
  • 28
    • 0037841763 scopus 로고    scopus 로고
    • Transcription start regions in the human genome are favored targets for MLV integration
    • Wu X, Li Y, Crise B, Burgess SM (2003) Transcription start regions in the human genome are favored targets for MLV integration. Science 300:1749-1751.
    • (2003) Science , vol.300 , pp. 1749-1751
    • Wu, X.1    Li, Y.2    Crise, B.3    Burgess, S.M.4
  • 29
    • 23844556421 scopus 로고    scopus 로고
    • Large-scale analysis of adeno-associated virus vector integration sites in normal human cells
    • Miller DG, et al. (2005) Large-scale analysis of adeno-associated virus vector integration sites in normal human cells. J Virol 79:11434-11442.
    • (2005) J Virol , vol.79 , pp. 11434-11442
    • Miller, D.G.1
  • 30
    • 0037162715 scopus 로고    scopus 로고
    • HIV-1 integration in the human genome favors active genes and local hotspots
    • Schröder AR, et al. (2002) HIV-1 integration in the human genome favors active genes and local hotspots. Cell 110:521-529.
    • (2002) Cell , vol.110 , pp. 521-529
    • Schröder, A.R.1
  • 31
    • 34547635063 scopus 로고    scopus 로고
    • HIV integration site selection: Analysis by massively parallel pyrosequencing reveals association with epigenetic modifications
    • Wang GP, Ciuffi A, Leipzig J, Berry CC, Bushman FD (2007) HIV integration site selection: Analysis by massively parallel pyrosequencing reveals association with epigenetic modifications. Genome Res 17:1186-1194.
    • (2007) Genome Res , vol.17 , pp. 1186-1194
    • Wang, G.P.1    Ciuffi, A.2    Leipzig, J.3    Berry, C.C.4    Bushman, F.D.5
  • 32
    • 79960687678 scopus 로고    scopus 로고
    • A gene-rich, transcriptionally active environment and the predeposition of repressive marks are predictive of susceptibility to KRAB/KAP1-mediated silencing
    • Meylan S, et al. (2011) A gene-rich, transcriptionally active environment and the predeposition of repressive marks are predictive of susceptibility to KRAB/KAP1-mediated silencing. BMC Genomics 12:378.
    • (2011) BMC Genomics , vol.12 , pp. 378
    • Meylan, S.1
  • 34
    • 0033780451 scopus 로고    scopus 로고
    • Transposition of maize Ac/Ds transposable elements in the yeast Saccharomyces cerevisiae
    • Weil CF, Kunze R (2000) Transposition of maize Ac/Ds transposable elements in the yeast Saccharomyces cerevisiae. Nat Genet 26:187-190.
    • (2000) Nat Genet , vol.26 , pp. 187-190
    • Weil, C.F.1    Kunze, R.2
  • 35
    • 41949108098 scopus 로고    scopus 로고
    • PiggyBac can bypass DNA synthesis during cut and paste transposition
    • Mitra R, Fain-Thornton J, Craig NL (2008) piggyBac can bypass DNA synthesis during cut and paste transposition. EMBO J 27:1097-1109.
    • (2008) EMBO J , vol.27 , pp. 1097-1109
    • Mitra, R.1    Fain-Thornton, J.2    Craig, N.L.3
  • 36
    • 0033231558 scopus 로고    scopus 로고
    • Patching broken chromosomes with extranuclear cellular DNA
    • Yu X, Gabriel A (1999) Patching broken chromosomes with extranuclear cellular DNA. Mol Cell 4:873-881.
    • (1999) Mol Cell , vol.4 , pp. 873-881
    • Yu, X.1    Gabriel, A.2
  • 37
    • 1642458360 scopus 로고    scopus 로고
    • Microhomology-dependent end joining and repair of transposon-induced DNA hairpins by host factors in Saccharomyces cerevisiae
    • Yu J, Marshall K, Yamaguchi M, Haber JE, Weil CF (2004) Microhomology-dependent end joining and repair of transposon-induced DNA hairpins by host factors in Saccharomyces cerevisiae. Mol Cell Biol 24:1351-1364.
    • (2004) Mol Cell Biol , vol.24 , pp. 1351-1364
    • Yu, J.1    Marshall, K.2    Yamaguchi, M.3    Haber, J.E.4    Weil, C.F.5
  • 38
    • 44349171666 scopus 로고    scopus 로고
    • Role of PSIP1/LEDGF/p75 in lentiviral infectivity and integration targeting
    • Marshall HM, et al. (2007) Role of PSIP1/LEDGF/p75 in lentiviral infectivity and integration targeting. PLoS ONE 2:e1340.
    • (2007) PLoS ONE , vol.2
    • Marshall, H.M.1
  • 39
    • 11144245992 scopus 로고    scopus 로고
    • Transposition of hAT elements links transposable elements and v (D)J recombination
    • Zhou L, et al. (2004) Transposition of hAT elements links transposable elements and V (D)J recombination. Nature 432:995-1001.
    • (2004) Nature , vol.432 , pp. 995-1001
    • Zhou, L.1
  • 40
    • 0001930678 scopus 로고    scopus 로고
    • eds Craig N, Craigie R, Gellert M, Lambowitz A (ASM Press, Washington)
    • Craig N (2002) Mobile DNA II, eds Craig N, Craigie R, Gellert M, Lambowitz A (ASM Press, Washington), pp 423-456.
    • (2002) Mobile DNA II , pp. 423-456
    • Craig, N.1
  • 41
    • 77249135986 scopus 로고    scopus 로고
    • Integrating prokaryotes and eukaryotes: DNA transposases in light of structure
    • Hickman AB, Chandler M, Dyda F (2010) Integrating prokaryotes and eukaryotes: DNA transposases in light of structure. Crit Rev Biochem Mol Biol 45:50-69.
    • (2010) Crit Rev Biochem Mol Biol , vol.45 , pp. 50-69
    • Hickman, A.B.1    Chandler, M.2    Dyda, F.3
  • 42
    • 0024449118 scopus 로고
    • Transposon mutagenesis of baculoviruses: Analysis of Trichoplusia ni transposon IFP2 insertions within the FP-locus of nuclear polyhedrosis viruses
    • Cary LC, et al. (1989) Transposon mutagenesis of baculoviruses: Analysis of Trichoplusia ni transposon IFP2 insertions within the FP-locus of nuclear polyhedrosis viruses. Virology 172:156-169.
    • (1989) Virology , vol.172 , pp. 156-169
    • Cary, L.C.1
  • 43
    • 77953132759 scopus 로고    scopus 로고
    • Comparative analysis of transposable element vector systems in human cells
    • Grabundzija I, et al. (2010) Comparative analysis of transposable element vector systems in human cells. Mol Ther 18:1200-1209.
    • (2010) Mol Ther , vol.18 , pp. 1200-1209
    • Grabundzija, I.1
  • 44
    • 0030111284 scopus 로고    scopus 로고
    • PCR analysis of insertion site specificity, transcription, and structural uniformity of the Lepidopteran transposable element IFP2 in the TN-368 cell genome
    • Elick TA, Bauser CA, Principe NM, Fraser MJ, Jr. (1996) PCR analysis of insertion site specificity, transcription, and structural uniformity of the Lepidopteran transposable element IFP2 in the TN-368 cell genome. Genetica 97:127-139.
    • (1996) Genetica , vol.97 , pp. 127-139
    • Elick, T.A.1    Bauser, C.A.2    Principe, N.M.3    Fraser Jr., M.J.4
  • 45
    • 26444508841 scopus 로고    scopus 로고
    • Single-nucleosome mapping of histone modifications in S. cerevisiae
    • Liu CL, et al. (2005) Single-nucleosome mapping of histone modifications in S. cerevisiae. PLoS Biol 3:e328.
    • (2005) PLoS Biol , vol.3
    • Liu, C.L.1
  • 46
    • 3042728872 scopus 로고    scopus 로고
    • Adeno-associated virus vectors integrate at chromosome breakage sites
    • Miller DG, Petek LM, Russell DW (2004) Adeno-associated virus vectors integrate at chromosome breakage sites. Nat Genet 36:767-773.
    • (2004) Nat Genet , vol.36 , pp. 767-773
    • Miller, D.G.1    Petek, L.M.2    Russell, D.W.3
  • 47
    • 28644443483 scopus 로고    scopus 로고
    • A role for LEDGF/p75 in targeting HIV DNA integration
    • Ciuffi A, et al. (2005) A role for LEDGF/p75 in targeting HIV DNA integration. Nat Med 11:1287-1289.
    • (2005) Nat Med , vol.11 , pp. 1287-1289
    • Ciuffi, A.1
  • 48
    • 34447513231 scopus 로고    scopus 로고
    • LEDGF/p75 functions downstream from preintegration complex formation to effect gene-specific HIV-1 integration
    • Shun MC, et al. (2007) LEDGF/p75 functions downstream from preintegration complex formation to effect gene-specific HIV-1 integration. Genes Dev 21:1767-1778.
    • (2007) Genes Dev , vol.21 , pp. 1767-1778
    • Shun, M.C.1
  • 49
    • 77951025711 scopus 로고    scopus 로고
    • Splendours and miseries of the benefit-risk ratio
    • Dupuy A (2010) Splendours and miseries of the benefit-risk ratio. Ann Dermatol Venereol 137:267-268.
    • (2010) Ann Dermatol Venereol , vol.137 , pp. 267-268
    • Dupuy, A.1
  • 50
    • 23744479962 scopus 로고    scopus 로고
    • Efficient transposition of the piggyBac (PB) transposon in mammalian cells and mice
    • Ding S, et al. (2005) Efficient transposition of the piggyBac (PB) transposon in mammalian cells and mice. Cell 122:473-483.
    • (2005) Cell , vol.122 , pp. 473-483
    • Ding, S.1
  • 51
    • 22444431606 scopus 로고    scopus 로고
    • Mammalian mutagenesis using a highly mobile somatic Sleeping Beauty transposon system
    • Dupuy AJ, Akagi K, Largaespada DA, Copeland NG, Jenkins NA (2005) Mammalian mutagenesis using a highly mobile somatic Sleeping Beauty transposon system. Nature 436:221-226.
    • (2005) Nature , vol.436 , pp. 221-226
    • Dupuy, A.J.1    Akagi, K.2    Largaespada, D.A.3    Copeland, N.G.4    Jenkins, N.A.5
  • 53
    • 33749536744 scopus 로고    scopus 로고
    • Transposons for gene therapy!
    • Ivics Z, Izsvák Z (2006) Transposons for gene therapy! Curr Gene Ther 6:593-607.
    • (2006) Curr Gene Ther , vol.6 , pp. 593-607
    • Ivics, Z.1    Izsvák, Z.2
  • 55
    • 78149309453 scopus 로고    scopus 로고
    • Novel hyperactive transposons for genetic modification of induced pluripotent and adult stem cells: A nonviral paradigm for coaxed differentiation
    • Belay E, et al. (2010) Novel hyperactive transposons for genetic modification of induced pluripotent and adult stem cells: A nonviral paradigm for coaxed differentiation. Stem Cells 28:1760-1771.
    • (2010) Stem Cells , vol.28 , pp. 1760-1771
    • Belay, E.1
  • 56
    • 70349320475 scopus 로고    scopus 로고
    • Stable gene transfer and expression in cord blood-derived CD34+ hematopoietic stem and progenitor cells by a hyperactive Sleeping Beauty transposon system
    • Xue XHX, et al. (2009) Stable gene transfer and expression in cord blood-derived CD34+ hematopoietic stem and progenitor cells by a hyperactive Sleeping Beauty transposon system. Blood 114:1319-1330.
    • (2009) Blood , vol.114 , pp. 1319-1330
    • Xue, X.H.X.1
  • 57
    • 0032579440 scopus 로고    scopus 로고
    • Designer deletion strains derived from Saccharomyces cerevisiae S288C: A useful set of strains and plasmids for PCR-mediated gene disruption and other applications
    • Brachmann CB, et al. (1998) Designer deletion strains derived from Saccharomyces cerevisiae S288C: A useful set of strains and plasmids for PCR-mediated gene disruption and other applications. Yeast 14:115-132.
    • (1998) Yeast , vol.14 , pp. 115-132
    • Brachmann, C.B.1
  • 58
    • 79953288618 scopus 로고    scopus 로고
    • HIV integration targeting: A pathway involving Transportin-3 and the nuclear pore protein RanBP2
    • Ocwieja KE, et al. (2011) HIV integration targeting: A pathway involving Transportin-3 and the nuclear pore protein RanBP2. PLoS Pathog 7:e1001313.
    • (2011) PLoS Pathog , vol.7
    • Ocwieja, K.E.1


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