-
1
-
-
0034667684
-
Plasticity, evolvability, and modularity in RNA
-
Ancel, L. W., and Fontana, W. (2000). Plasticity, evolvability, and modularity in RNA. J. Exp. Zool. 288, 242-283.
-
(2000)
J. Exp. Zool.
, vol.288
, pp. 242-283
-
-
Ancel, L.W.1
Fontana, W.2
-
2
-
-
38549153238
-
Data growth and its impact on the SCOP database: new developments
-
Andreeva, A., Howorth, D., Chandonia, J.-M., Brenner, S. E., Hubbard, T. J., Chothia, C., and Murzin, A. G. (2008). Data growth and its impact on the SCOP database: new developments. Nucleic Acids Res. 36, D419-D425.
-
(2008)
Nucleic Acids Res
, vol.36
-
-
Andreeva, A.1
Howorth, D.2
Chandonia, J.-M.3
Brenner, S.E.4
Hubbard, T.J.5
Chothia, C.6
Murzin, A.G.7
-
3
-
-
46149119868
-
Biosemiotics: a new understanding of life
-
Barbieri, M. (2008). Biosemiotics: a new understanding of life. Naturwissenschaften 95, 577-599.
-
(2008)
Naturwissenschaften
, vol.95
, pp. 577-599
-
-
Barbieri, M.1
-
4
-
-
79951672423
-
Proteome evolution and the metabolic origins of translation and cellular life
-
Caetano-Anollés, D., Kim, K. M., and Caetano-Anollés, G. (2011). Proteome evolution and the metabolic origins of translation and cellular life. J. Mol. Evol. 72, 14-32.
-
(2011)
J. Mol. Evol.
, vol.72
, pp. 14-32
-
-
Caetano-Anollés, D.1
Kim, K.M.2
Caetano-Anollés, G.3
-
5
-
-
0038486929
-
An evolutionarily structured universe of protein architecture
-
Caetano-Anollés, G., and Caetano-Anollés, D. (2003). An evolutionarily structured universe of protein architecture. Genome Res. 13, 1563-1571.
-
(2003)
Genome Res
, vol.13
, pp. 1563-1571
-
-
Caetano-Anollés, G.1
Caetano-Anollés, D.2
-
6
-
-
19944393249
-
Universal sharing patterns in proteomes and evolution of protein fold architecture and life
-
Caetano-Anollés, G., and Caetano-Anollés, D. (2005). Universal sharing patterns in proteomes and evolution of protein fold architecture and life. J. Mol. Evol. 60, 484-498.
-
(2005)
J. Mol. Evol.
, vol.60
, pp. 484-498
-
-
Caetano-Anollés, G.1
Caetano-Anollés, D.2
-
7
-
-
84862687324
-
The phylogenomic roots of modern biochemistry: origins of proteins, cofactors and protein biosynthesis
-
Caetano-Anollés, G., Kim, K. M., and Caetano-Anollés, D. (2012). The phylogenomic roots of modern biochemistry: origins of proteins, cofactors and protein biosynthesis. J. Mol. Evol. 74, 1-34.
-
(2012)
J. Mol. Evol.
, vol.74
, pp. 1-34
-
-
Caetano-Anollés, G.1
Kim, K.M.2
Caetano-Anollés, D.3
-
8
-
-
77954830498
-
Exploring the interplay of stability and function in protein evolution
-
Caetano-Anollés, G., and Mittenthal, J. (2010). Exploring the interplay of stability and function in protein evolution. Bioessays 32, 655-658.
-
(2010)
Bioessays
, vol.32
, pp. 655-658
-
-
Caetano-Anollés, G.1
Mittenthal, J.2
-
9
-
-
59849127275
-
The origin, evolution and structure of the protein world
-
Caetano-Anollés, G., Wang, M., Caetano-Anollés, D., and Mittenthal, J. E. (2009a). The origin, evolution and structure of the protein world. Biochem. J. 417, 621-637.
-
(2009)
Biochem. J.
, vol.417
, pp. 621-637
-
-
Caetano-Anollés, G.1
Wang, M.2
Caetano-Anollés, D.3
Mittenthal, J.E.4
-
10
-
-
56949085134
-
The origin and evolution of modern metabolism
-
Caetano-Anollés, G., Yafremava, L. S., Gee, H., Caetano-Anollés, D., Kim, H. S., and Mittenthal, J. E. (2009b). The origin and evolution of modern metabolism. Intl. J. Biochem. Cell Biol. 41,285-297.
-
(2009)
Intl. J. Biochem. Cell Biol.
, vol.41
, pp. 285-297
-
-
Caetano-Anollés, G.1
Yafremava, L.S.2
Gee, H.3
Caetano-Anollés, D.4
Kim, H.S.5
Mittenthal, J.E.6
-
11
-
-
22344449952
-
The developmental miRNA profiles of zebrafish as determined by small RNA cloning
-
Chen, P. Y., Manninga, H., Slanchev, K., Chien, M., Russo, J. J., Ju, J., Sheridan, R., John, B., Marks, D. S., Gaidatzis, D., Sander, C., Zavolan, M., and Tuschi, T. (2005). The developmental miRNA profiles of zebrafish as determined by small RNA cloning. Genes Dev. 19, 1288-1293.
-
(2005)
Genes Dev.
, vol.19
, pp. 1288-1293
-
-
Chen, P.Y.1
Manninga, H.2
Slanchev, K.3
Chien, M.4
Russo, J.J.5
Ju, J.6
Sheridan, R.7
John, B.8
Marks, D.S.9
Gaidatzis, D.10
Sander, C.11
Zavolan, M.12
Tuschi, T.13
-
12
-
-
77954828384
-
The natural philosophy of engines
-
Cottrell, A. (1979). The natural philosophy of engines. Contemp. Phys. 20, 1-10.
-
(1979)
Contemp. Phys.
, vol.20
, pp. 1-10
-
-
Cottrell, A.1
-
13
-
-
35748936426
-
A phylostratig-raphy approach to uncover the genomic history of major adaptations in metazoan lineages
-
Domazet-Lošo, T., Brajkovic, J., and Tautz, D. (2007). A phylostratig-raphy approach to uncover the genomic history of major adaptations in metazoan lineages. Trends Genet. 23, 533-539.
-
(2007)
Trends Genet
, vol.23
, pp. 533-539
-
-
Domazet-Lošo, T.1
Brajkovic, J.2
Tautz, D.3
-
14
-
-
0028605603
-
Temporal col-inearity and the phylogenetic progression: a basis for the stability of a vertebrate Bauplan and the evolution of morphologies through heterochrony
-
Duboule, D. (1994). Temporal col-inearity and the phylogenetic progression: a basis for the stability of a vertebrate Bauplan and the evolution of morphologies through heterochrony. Dev. Suppl. 1994, 135-142.
-
(1994)
Dev. Suppl.
, vol.1994
, pp. 135-142
-
-
Duboule, D.1
-
15
-
-
77953778296
-
History of biological metal utilization inferred through phylogenomic analysis of protein structures
-
Dupont, C. L., Butcher, A., Valas, R. E., Bourne, P. E., and Caetano-Anollés, G. (2010). History of biological metal utilization inferred through phylogenomic analysis of protein structures. Proc. Natl. Acad. Sci. U.S.A. 107, 10567-10572.
-
(2010)
Proc. Natl. Acad. Sci. U.S.A.
, vol.107
, pp. 10567-10572
-
-
Dupont, C.L.1
Butcher, A.2
Valas, R.E.3
Bourne, P.E.4
Caetano-Anollés, G.5
-
16
-
-
80055049523
-
Evidence for retrogene origins of the prion gene family
-
doi: 10.1371/journal.pone.0026800
-
Ehsani, S., Tao, R., Pocanschi, C. L., Ren, H., Harrison, P. M., and Schmitt-Ulms, G. (2011). Evidence for retrogene origins of the prion gene family. PLoS ONE 6:e26800. doi: 10.1371/journal.pone.0026800
-
(2011)
PLoS ONE
, vol.6
-
-
Ehsani, S.1
Tao, R.2
Pocanschi, C.L.3
Ren, H.4
Harrison, P.M.5
Schmitt-Ulms, G.6
-
17
-
-
0033944978
-
Natural selection: a phase transition?
-
Eigen, M. (2000). Natural selection: a phase transition? Biophys. Chem. 85, 101-123.
-
(2000)
Biophys. Chem.
, vol.85
, pp. 101-123
-
-
Eigen, M.1
-
18
-
-
0035478585
-
Macromolecular crowding: obvious but underappreciated
-
Ellis, R. J. (2001). Macromolecular crowding: obvious but underappreciated. Trends Biochem. Sci. 26, 597-603.
-
(2001)
Trends Biochem. Sci.
, vol.26
, pp. 597-603
-
-
Ellis, R.J.1
-
19
-
-
0036340121
-
Barrier trees of degenerate landscapes
-
Flamm, C., Hofacker, I. L., Stadler, P. F., and Wolfinger, M. T. (2002). Barrier trees of degenerate landscapes. Z. Phys. Chem.216, 1-19.
-
(2002)
Z. Phys. Chem
, vol.216
, pp. 1-19
-
-
Flamm, C.1
Hofacker, I.L.2
Stadler, P.F.3
Wolfinger, M.T.4
-
20
-
-
80855134303
-
Origins and evolution of the HET-s prion- forming protein: searching for other amyloid-forming solenoids
-
doi: 10.1371/journal. pone.0027342
-
Gendoo, D. M., and Harrison, P. M. (2011). Origins and evolution of the HET-s prion- forming protein: searching for other amyloid-forming solenoids. PLoS ONE 6:e27342. doi: 10.1371/journal. pone.0027342
-
(2011)
PLoS ONE
, vol.6
-
-
Gendoo, D.M.1
Harrison, P.M.2
-
21
-
-
68949107236
-
-
New York, NY: Farrar, Straus and Giroux
-
Gopnik, A. (2009). The Philosophical Baby. New York, NY: Farrar, Straus and Giroux.
-
(2009)
The Philosophical Baby
-
-
Gopnik, A.1
-
22
-
-
33645353062
-
Reconciling niche and neutrality: the continuum hypothesis
-
Gravel, D., Canham, C. D., Beaudet, M., and Messier, C. (2006). Reconciling niche and neutrality: the continuum hypothesis. Ecol. Lett. 9, 399-406.
-
(2006)
Ecol. Lett.
, vol.9
, pp. 399-406
-
-
Gravel, D.1
Canham, C.D.2
Beaudet, M.3
Messier, C.4
-
23
-
-
84858040413
-
Ribosomal history reveals origins of modern protein synthesis
-
doi: 10.1371/ journal.pone.0032776
-
Harish, A., and Caetano-Anollés, G. (2012). Ribosomal history reveals origins of modern protein synthesis. PLoS ONE 7:e32776. doi: 10.1371/ journal.pone.0032776
-
(2012)
PLoS ONE
, vol.7
-
-
Harish, A.1
Caetano-Anollés, G.2
-
24
-
-
33745666760
-
Non-equilibrium phase transitions
-
Hinrichsen, H. (2006). Non-equilibrium phase transitions. Phys. A 369, 1-28.
-
(2006)
Phys. A
, vol.369
, pp. 1-28
-
-
Hinrichsen, H.1
-
25
-
-
33644623020
-
The evolution of information in the major transitions
-
Jablonka, E., and Lamb, M. J. (2006). The evolution of information in the major transitions.J. Theor. Biol. 239, 236-246.
-
(2006)
J. Theor. Biol.
, vol.239
, pp. 236-246
-
-
Jablonka, E.1
Lamb, M.J.2
-
26
-
-
0026570216
-
Diffusible factors in vertebrate embryonic induction
-
Jessell, T. M., and Melton, D. A. (1992). Diffusible factors in vertebrate embryonic induction. Cell 66, 257-270.
-
(1992)
Cell
, vol.66
, pp. 257-270
-
-
Jessell, T.M.1
Melton, D.A.2
-
27
-
-
0021277007
-
On the origin of enzyme species by means of natural selection
-
Kacser, H., and Beeby, R. (1984). On the origin of enzyme species by means of natural selection. J. Mol. Evol. 20, 38-51.
-
(1984)
J. Mol. Evol.
, vol.20
, pp. 38-51
-
-
Kacser, H.1
Beeby, R.2
-
28
-
-
80053304045
-
The proteomic complexity and rise of the primordial ancestor of diversified life
-
Kim, K. M., and Caetano-Anollés, G. (2011). The proteomic complexity and rise of the primordial ancestor of diversified life. BMC Evol. Biol. 11, 140.
-
(2011)
BMC Evol. Biol.
, vol.11
, pp. 140
-
-
Kim, K.M.1
Caetano-Anollés, G.2
-
30
-
-
48449083700
-
NOBAI: a web server for character coding of geometrical and statistical features in RNA structure
-
Knudsen, V., and Caetano-Anollés, G. (2008). NOBAI: a web server for character coding of geometrical and statistical features in RNA structure. Nucleic Acids Res. 36, W85-W90.
-
(2008)
Nucleic Acids Res
, vol.36
-
-
Knudsen, V.1
Caetano-Anollés, G.2
-
31
-
-
33748852396
-
Metabolic-state-dependent remodeling of the transcriptome in response to anoxia and subsequent reoxygenation in Saccharomyces cerevisiae
-
Lai, L.-C., Kosorukoff, A. L., Burke, P. V., and Kwast, K. E. (2006). Metabolic-state-dependent remodeling of the transcriptome in response to anoxia and subsequent reoxygenation in Saccharomyces cerevisiae. Eukaryo. Cell 5, 1468-1489.
-
(2006)
Eukaryo. Cell
, vol.5
, pp. 1468-1489
-
-
Lai, L.-C.1
Kosorukoff, A.L.2
Burke, P.V.3
Kwast, K.E.4
-
32
-
-
38649141700
-
Hierarchy, complexity, society
-
ed D. Pumain (Dordretch: Springer Methods)
-
Lane, D. (2006). "Hierarchy, complexity, society," in Hierarchy in Natural and Social Sciences, ed D. Pumain (Dordretch: Springer Methods), 81-119.
-
(2006)
Hierarchy in Natural and Social Sciences
, pp. 81-119
-
-
Lane, D.1
-
33
-
-
33847616971
-
Growth of novel protein structural data
-
Levitt, M. (2007). Growth of novel protein structural data. Proc. Natl. Acad. Sci. U.S.A. 104,3183-3188.
-
(2007)
Proc. Natl. Acad. Sci. U.S.A.
, vol.104
, pp. 3183-3188
-
-
Levitt, M.1
-
34
-
-
0032936661
-
Too late for the midwife toad - stress, variability and Hsp90
-
McLaren, A. (1999). Too late for the midwife toad - stress, variability and Hsp90. Trends Genet. 15, 169-171.
-
(1999)
Trends Genet
, vol.15
, pp. 169-171
-
-
McLaren, A.1
-
35
-
-
0029837737
-
The puzzle of the Krebs citric acid cycle: assembling the pieces of chemically feasible reactions, and opportunism in the design of metabolic pathways during evolution
-
Meléndez-Hevia, E., Waddell, T. G., and Cascante, M. (1996). The puzzle of the Krebs citric acid cycle: assembling the pieces of chemically feasible reactions, and opportunism in the design of metabolic pathways during evolution. J. Mol. Evol. 43, 293-303.
-
(1996)
J. Mol. Evol.
, vol.43
, pp. 293-303
-
-
Meléndez-Hevia, E.1
Waddell, T.G.2
Cascante, M.3
-
36
-
-
0033933384
-
Limbs and tail as evolutionarily diverging duplicates of the main body axis
-
Minelli, A. (2000). Limbs and tail as evolutionarily diverging duplicates of the main body axis. Evol. Dev. 2, 157-165.
-
(2000)
Evol. Dev.
, vol.2
, pp. 157-165
-
-
Minelli, A.1
-
37
-
-
0035819507
-
A new method for assembling metabolic networks, with application to the Krebs citric acid cycle
-
Mittenthal, J. E., Clarke, B., Waddell, T. G., and Fawcet, G. (2001). A new method for assembling metabolic networks, with application to the Krebs citric acid cycle. J. Theor. Biol. 208, 361-382.
-
(2001)
J. Theor. Biol.
, vol.208
, pp. 361-382
-
-
Mittenthal, J.E.1
Clarke, B.2
Waddell, T.G.3
Fawcet, G.4
-
38
-
-
76649085598
-
A theory of biochemical organization, metabolic pathways, and evolution
-
Morowitz, H. J. (1999). A theory of biochemical organization, metabolic pathways, and evolution. Complexity 4, 39-53.
-
(1999)
Complexity
, vol.4
, pp. 39-53
-
-
Morowitz, H.J.1
-
39
-
-
0028961335
-
SCOP: a structural classification of proteins database for the investigation of sequences and structures
-
Murzin, A. G., Brenner, S. E., Hubbard, T., and Chothia, C. (1995). SCOP: a structural classification of proteins database for the investigation of sequences and structures. J. Mol. Biol. 247, 536-540.
-
(1995)
J. Mol. Biol.
, vol.247
, pp. 536-540
-
-
Murzin, A.G.1
Brenner, S.E.2
Hubbard, T.3
Chothia, C.4
-
40
-
-
80054920222
-
Animal egg as evolutionary innovation: a solution to the "embryonic hourglass" puzzle
-
Newman, S. A. (2011). Animal egg as evolutionary innovation: a solution to the "embryonic hourglass" puzzle. J. Exp. Zool. B Mol. Dev. Evol. 316, 467-483
-
(2011)
J. Exp. Zool. B Mol. Dev. Evol.
, vol.316
, pp. 467-483
-
-
Newman, S.A.1
-
41
-
-
0025123251
-
'Generic' physical mechanisms of morphogenesis and pattern formation
-
Newman, S. A., and Comper, W. D. (1990). 'Generic' physical mechanisms of morphogenesis and pattern formation. Development 110, 1-18.
-
(1990)
Development
, vol.110
, pp. 1-18
-
-
Newman, S.A.1
Comper, W.D.2
-
42
-
-
33646347144
-
The origins and evolution of functional modules: lessons from protein complexes
-
Pereira-Leal, J. B., Levy, E. D., and Teichmann, S. A. (2006). The origins and evolution of functional modules: lessons from protein complexes. Phil. Trans. R. Soc. Lond. B Biol. Sci. 361, 507-517.
-
(2006)
Phil. Trans. R. Soc. Lond. B Biol. Sci.
, vol.361
, pp. 507-517
-
-
Pereira-Leal, J.B.1
Levy, E.D.2
Teichmann, S.A.3
-
43
-
-
0004204913
-
-
Chicago, IL: University of Chicago Press
-
Raff, R. (1996). The Shape of Life. Chicago, IL: University of Chicago Press.
-
(1996)
The Shape of Life
-
-
Raff, R.1
-
44
-
-
40549098377
-
Origins of the other metazoan body plans: the evolution of larval forms
-
Raff, R. A. (2008). Origins of the other metazoan body plans: the evolution of larval forms. Phil. Trans. Roy. Soc. B Biol. Sci. 363, 1473-1479.
-
(2008)
Phil. Trans. Roy. Soc. B Biol. Sci.
, vol.363
, pp. 1473-1479
-
-
Raff, R.A.1
-
45
-
-
0030821697
-
There is no highly conserved embryonic stage in the vertebrates: implications for current theories of evolution and development
-
Richardson, M. K., Hanken, J., Gooneratne, M. L., Pieau, C., Reynaud, A., Selwood, L., and Wright, G. M. (1997). There is no highly conserved embryonic stage in the vertebrates: implications for current theories of evolution and development. Anat. Embryol. 196, 91-106.
-
(1997)
Anat. Embryol.
, vol.196
, pp. 91-106
-
-
Richardson, M.K.1
Hanken, J.2
Gooneratne, M.L.3
Pieau, C.4
Reynaud, A.5
Selwood, L.6
Wright, G.M.7
-
46
-
-
0032569851
-
Hsp90 as a capacitor for morphological evolution
-
Rutherford, S. L., and Lindquist, S. (1998). Hsp90 as a capacitor for morphological evolution. Nature 396,336-342.
-
(1998)
Nature
, vol.396
, pp. 336-342
-
-
Rutherford, S.L.1
Lindquist, S.2
-
47
-
-
0002638615
-
The evolution of patterning mechanisms: gleanings from insect embryogenesis and spermatogenesis
-
eds B. C. Goodwin, N. Holder, and C. C. Wylie (Cambridge: Cambridge University Press)
-
Sander, K. (1983). "The evolution of patterning mechanisms: gleanings from insect embryogenesis and spermatogenesis," in Development and Evolution, eds B. C. Goodwin, N. Holder, and C. C. Wylie (Cambridge: Cambridge University Press), 123-159.
-
(1983)
Development and Evolution
, pp. 123-159
-
-
Sander, K.1
-
48
-
-
33646546733
-
Self-organized similarity, the evolutionary emergence of groups of similar species
-
Scheffer, M., and van Nes, E. H. (2006). Self-organized similarity, the evolutionary emergence of groups of similar species. Proc. Natl. Acad. Sci. U.S.A. 103, 6230-6235.
-
(2006)
Proc. Natl. Acad. Sci. U.S.A.
, vol.103
, pp. 6230-6235
-
-
Scheffer, M.1
van Nes, E.H.2
-
49
-
-
0038434059
-
Metabolites: a helping hand for pathway evolution?
-
Schmidt, S., Sunyaev, S., Bork, P., and Dadenkar, T. (2003). Metabolites: a helping hand for pathway evolution? Trends Biochem. Sci. 28, 336-341.
-
(2003)
Trends Biochem. Sci.
, vol.28
, pp. 336-341
-
-
Schmidt, S.1
Sunyaev, S.2
Bork, P.3
Dadenkar, T.4
-
50
-
-
70349669073
-
Evolutionary descent of prion genes from the ZIP family of metal ion transporters
-
doi: 10.1371/journal. pone.0007208
-
Schmitt-Ulms, G., Ehsani, S., Watts, J. C., Westaway, D., and Wille, H. (2009). Evolutionary descent of prion genes from the ZIP family of metal ion transporters. PLoS ONE 4:e7208. doi: 10.1371/journal. pone.0007208
-
(2009)
PLoS ONE
, vol.4
-
-
Schmitt-Ulms, G.1
Ehsani, S.2
Watts, J.C.3
Westaway, D.4
Wille, H.5
-
51
-
-
0033013683
-
Estimating the contributions of selection and self-organization in RNA secondary structure
-
Schultes, E. A., Hraber, P. T., and LaBean, T. H. (1999). Estimating the contributions of selection and self-organization in RNA secondary structure. J. Mol. Evol. 49, 76-83.
-
(1999)
J. Mol. Evol.
, vol.49
, pp. 76-83
-
-
Schultes, E.A.1
Hraber, P.T.2
LaBean, T.H.3
-
52
-
-
0000790263
-
The architecture of complexity
-
Simon, H. (1962). The architecture of complexity. Proc. Am. Phil. Soc. 106, 467-482.
-
(1962)
Proc. Am. Phil. Soc.
, vol.106
, pp. 467-482
-
-
Simon, H.1
-
53
-
-
0027914438
-
The zootype and the phylotypic stage
-
Slack, J. M., Holland, P. W., and Graham, C. F. (1993). The zootype and the phylotypic stage. Nature 361,490-492.
-
(1993)
Nature
, vol.361
, pp. 490-492
-
-
Slack, J.M.1
Holland, P.W.2
Graham, C.F.3
-
54
-
-
1242270890
-
Who came first - larvae or adults? Origins of bilaterian metazoan larvae
-
Sly, B. J., Snoke, M. S., and Raff, R. A. (2003). Who came first - larvae or adults? Origins of bilaterian metazoan larvae. Intl. J. Dev. Biol. 47, 623-632.
-
(2003)
Intl. J. Dev. Biol.
, vol.47
, pp. 623-632
-
-
Sly, B.J.1
Snoke, M.S.2
Raff, R.A.3
-
55
-
-
0028987952
-
The major evolutionary transitions
-
Szathmáry, E., and Smith, J. M. (1995). The major evolutionary transitions. Nature 374, 227-232.
-
(1995)
Nature
, vol.374
, pp. 227-232
-
-
Szathmáry, E.1
Smith, J.M.2
-
56
-
-
22644451907
-
Out on a limb: parallels in vertebrate and invertebrate limb patterning and the origin of appendages
-
Tabin, C. J., Carroll, S. B., and Panganiban, G. (1999). Out on a limb: parallels in vertebrate and invertebrate limb patterning and the origin of appendages. Amer. Zool. 39, 650-663.
-
(1999)
Amer. Zool.
, vol.39
, pp. 650-663
-
-
Tabin, C.J.1
Carroll, S.B.2
Panganiban, G.3
-
57
-
-
0036306115
-
Why are proteins so robust to site mutations? J
-
Taverna, D. M., and Goldstein, R. A. (2002). Why are proteins so robust to site mutations? J. Mol. Biol. 315, 479-484.
-
(2002)
Mol. Biol.
, vol.315
, pp. 479-484
-
-
Taverna, D.M.1
Goldstein, R.A.2
-
58
-
-
58149089173
-
Consciousness as integrated information: a provisional manifesto
-
Tononi, G. (2008). Consciousness as integrated information: a provisional manifesto. Biol. Bull. 215, 216-242.
-
(2008)
Biol. Bull.
, vol.215
, pp. 216-242
-
-
Tononi, G.1
-
59
-
-
33746092088
-
Collective evolution and the genetic code
-
Vetsigian, K., Woese, C., and Goldenfeld, N. (2006). Collective evolution and the genetic code. Proc. Natl. Acad. Sci. U.S.A. 103, 10696-10701.
-
(2006)
Proc. Natl. Acad. Sci. U.S.A.
, vol.103
, pp. 10696-10701
-
-
Vetsigian, K.1
Woese, C.2
Goldenfeld, N.3
-
60
-
-
0025023531
-
Evolution of the first metabolic cycles
-
Wächtershäuser, G. (1990). Evolution of the first metabolic cycles. Proc. Natl. Acad. Sci. U.S.A. 87, 200-204.
-
(1990)
Proc. Natl. Acad. Sci. U.S.A.
, vol.87
, pp. 200-204
-
-
Wächtershäuser, G.1
-
61
-
-
51149203927
-
Canalization of development and the inheritance of acquired characters
-
Waddington, C. H. (1942). Canalization of development and the inheritance of acquired characters. Nature 150, 563-565.
-
(1942)
Nature
, vol.150
, pp. 563-565
-
-
Waddington, C.H.1
-
62
-
-
36348992094
-
Robustness and evolvability: a paradox resolved
-
Wagner, A. (2008). Robustness and evolvability: a paradox resolved. Proc. Biol. Sci. 275,91-100.
-
(2008)
Proc. Biol. Sci.
, vol.275
, pp. 91-100
-
-
Wagner, A.1
-
63
-
-
36248936497
-
The road to modularity
-
Wagner, G. P., Pavlicev, M., and Cheverud, J. M. (2007). The road to modularity. Nat. Rev. Genet. 8, 921-930.
-
(2007)
Nat. Rev. Genet.
, vol.8
, pp. 921-930
-
-
Wagner, G.P.1
Pavlicev, M.2
Cheverud, J.M.3
-
64
-
-
58149196295
-
The evolutionary mechanics of domain organization in pro-teomes and the rise of modularity in the protein world
-
Wang, M., and Caetano-Anollés, G. (2009). The evolutionary mechanics of domain organization in pro-teomes and the rise of modularity in the protein world. Structure 17, 66-78.
-
(2009)
Structure
, vol.17
, pp. 66-78
-
-
Wang, M.1
Caetano-Anollés, G.2
-
65
-
-
78650476811
-
Universal molecular clock of protein folds and its power in tracing the early history of aerobic metabolism and planet oxygenation
-
Wang, M., Jiang, Y.-Y., Kim, K. M., Qu, G., Ji, H. F., Mittenthal, J. E., Zhang, H.-Y., and Caetano-Anollés, G. (2011). Universal molecular clock of protein folds and its power in tracing the early history of aerobic metabolism and planet oxygenation. Mol. Biol. Evol. 28, 567-582.
-
(2011)
Mol. Biol. Evol.
, vol.28
, pp. 567-582
-
-
Wang, M.1
Jiang, Y.-Y.2
Kim, K.M.3
Qu, G.4
Ji, H.F.5
Mittenthal, J.E.6
Zhang, H.-Y.7
Caetano-Anollés, G.8
-
66
-
-
35948990789
-
Reductive evolution of architectural repertoires in proteomes and the birth of the tripartite world
-
Wang, M., Yafremava, L. S., Caetano-Anollés, D., Mittenthal, J. E., and Caetano-Anollés, G. (2007). Reductive evolution of architectural repertoires in proteomes and the birth of the tripartite world. Genome Res. 17, 1572-1585.
-
(2007)
Genome Res.
, vol.17
, pp. 1572-1585
-
-
Wang, M.1
Yafremava, L.S.2
Caetano-Anollés, D.3
Mittenthal, J.E.4
Caetano-Anollés, G.5
-
69
-
-
11244312877
-
Comparing folding codes in simple heteropolymer models of protein evolutionary landscapes: robustness of the superfun-nel paradigm
-
Wroe, R., Bornberg-Bauer, E., and Chan, H. S. (2005). Comparing folding codes in simple heteropolymer models of protein evolutionary landscapes: robustness of the superfun-nel paradigm. Biophys. J. 88, 118-131.
-
(2005)
Biophys. J.
, vol.88
, pp. 118-131
-
-
Wroe, R.1
Bornberg-Bauer, E.2
Chan, H.S.3
-
70
-
-
0015980083
-
On earlier states of the biochemical system
-
Ycas, M. (1974). On earlier states of the biochemical system. J. Theor. Biol. 44, 145-160.
-
(1974)
J. Theor. Biol.
, vol.44
, pp. 145-160
-
-
Ycas, M.1
|