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Volumn 95, Issue 7, 2008, Pages 577-599

Biosemiotics: A new understanding of life

Author keywords

Biosemiotics; Codes; Evolution; Information; Meaning

Indexed keywords

EVOLUTION; GENE; GENETICS; INFORMATION; LIFE HISTORY; THEORETICAL STUDY;

EID: 46149119868     PISSN: 00281042     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00114-008-0368-x     Document Type: Review
Times cited : (139)

References (95)
  • 2
    • 65249115020 scopus 로고
    • Augustine of Hippo (389 AD) de Doctrina Christiana
    • Green WM (ed) CSEL 80, Vienna
    • Augustine of Hippo (389 AD) De Doctrina Christiana. In: Green WM (ed) Sancti Augustini Opera, 1963, CSEL 80, Vienna
    • (1963) Sancti Augustini Opera
  • 3
    • 0019795837 scopus 로고
    • The ribotype theory on the origin of life
    • Barbieri M (1981) The ribotype theory on the origin of life. J Theor Biol 91:1545-601
    • (1981) J Theor Biol , vol.91 , pp. 1545-601
    • Barbieri, M.1
  • 5
    • 0032234856 scopus 로고    scopus 로고
    • The organic codes. the basic mechanism of macroevolution
    • Barbieri M (1998) The organic codes. The basic mechanism of macroevolution. Rivista di Biologia-Biology Forum 91:481-514
    • (1998) Rivista di Biologia-Biology Forum , vol.91 , pp. 481-514
    • Barbieri, M.1
  • 7
    • 4544292862 scopus 로고    scopus 로고
    • Biology with information and meaning
    • Barbieri M (2003b) Biology with information and meaning. Hist Philos Life Sci 25:243-254
    • (2003) Hist Philos Life Sci , vol.25 , pp. 243-254
    • Barbieri, M.1
  • 8
    • 3042741348 scopus 로고    scopus 로고
    • The definitions of information and meaning. Two possible boundaries between physics and biology
    • Barbieri M (2004) The definitions of information and meaning. Two possible boundaries between physics and biology. Rivista di Biologia-Biology Forum 97:91-110
    • (2004) Rivista di Biologia-Biology Forum , vol.97 , pp. 91-110
    • Barbieri, M.1
  • 10
    • 33744994121 scopus 로고    scopus 로고
    • Should genetics get an information-theoretic education
    • 1
    • Battail G (2006) Should genetics get an information-theoretic education. IEEE Eng Med Biol Mag 25(1):34-45
    • (2006) IEEE Eng Med Biol Mag , vol.25 , pp. 34-45
    • Battail, G.1
  • 11
    • 84919763806 scopus 로고    scopus 로고
    • Information theory and error-correcting codes in genetics and biological evolution
    • Springer Dordrecht
    • Battail G (2007) Information theory and error-correcting codes in genetics and biological evolution. In: Barbieri M (ed) Introduction to biosemiotics. Springer, Dordrecht, pp 299-345
    • (2007) Introduction to Biosemiotics , pp. 299-345
    • Battail, G.1    Barbieri, M.2
  • 13
    • 0022142095 scopus 로고
    • The molecular basis of communication within the cell
    • Berridge M (1985) The molecular basis of communication within the cell. Sci Am 253:142-152
    • (1985) Sci Am , vol.253 , pp. 142-152
    • Berridge, M.1
  • 14
    • 4544265160 scopus 로고    scopus 로고
    • Biology without information
    • Boniolo G (2003) Biology without information. Hist Philos Life Sci 25:255-273
    • (2003) Hist Philos Life Sci , vol.25 , pp. 255-273
    • Boniolo, G.1
  • 15
    • 84919762201 scopus 로고    scopus 로고
    • Cellular semiotics and signal transduction
    • Springer Dordrecht
    • Bruni LE (2007) Cellular semiotics and signal transduction. In: Barbieri M (ed) Introduction to biosemiotics. Springer, Dordrecht, pp 365-407
    • (2007) Introduction to Biosemiotics , pp. 365-407
    • Bruni, L.E.1    Barbieri, M.2
  • 21
    • 34248708903 scopus 로고    scopus 로고
    • On 'semiotics' as naming the doctrine of signs
    • Deely J (2006) On 'semiotics' as naming the doctrine of signs. Semiotica 158:1-33
    • (2006) Semiotica , vol.158 , pp. 1-33
    • Deely, J.1
  • 24
    • 84968054140 scopus 로고
    • Nothing in biology makes sense except in the light of evolution
    • Dobzhansky T (1973) Nothing in biology makes sense except in the light of evolution. Am Biol Teach 35:125-129
    • (1973) Am Biol Teach , vol.35 , pp. 125-129
    • Dobzhansky, T.1
  • 25
    • 46149083101 scopus 로고    scopus 로고
    • RNA as code makers: A biosemiotic view of RNAi and cell immunity
    • Springer Dordrecht
    • Faria M (2007) RNA as code makers: a biosemiotic view of RNAi and cell immunity. In: Barbieri M Introduction to biosemiotics. Springer, Dordrecht, pp 347-364
    • (2007) Introduction to Biosemiotics , pp. 347-364
    • Faria, M.1    Barbieri, M.2
  • 27
    • 84919711066 scopus 로고    scopus 로고
    • The evolutionary history of biosemiotics
    • Springer Dordrecht
    • Favareau D (2007) The evolutionary history of biosemiotics. In: Barbieri M Introduction to biosemiotics. Springer, Dordrecht, pp 1-67
    • (2007) Introduction to Biosemiotics , pp. 1-67
    • Favareau, D.1    Barbieri, M.2
  • 28
    • 34848872221 scopus 로고    scopus 로고
    • Delineation of multiple subpallial progenitor domains by the combinatorial expression of transcriptional codes
    • 36
    • Flames N, Pla R, Gelman DM, Rubenstein JLR, Puelles L, Marin O (2007) Delineation of multiple subpallial progenitor domains by the combinatorial expression of transcriptional codes. J Neurosci 27(36):9682-9695
    • (2007) J Neurosci , vol.27 , pp. 9682-9695
    • Flames, N.1    Pla, R.2    Gelman, D.M.3    Rubenstein, J.L.R.4    Puelles, L.5    Marin, O.6
  • 29
    • 0037720699 scopus 로고
    • Concepts of molecular biosemiotics and molecular evolution
    • Elsevier Amsterdam
    • Florkin M (1974) Concepts of molecular biosemiotics and molecular evolution. In: Florkin M Stotz EH (ed) Comprehensive biochemistry, vol. 29A. Elsevier, Amsterdam, pp 1-124
    • (1974) Comprehensive Biochemistry, Vol. 29A , pp. 1-124
    • Florkin, M.1    Florkin, M.2    Stotz, E.H.3
  • 31
    • 0034079042 scopus 로고    scopus 로고
    • Biological information transfer beyond the genetic code: The sugar code
    • Gabius H-J (2000) Biological information transfer beyond the genetic code: the sugar code. Naturwissenschaften 87:108-121
    • (2000) Naturwissenschaften , vol.87 , pp. 108-121
    • Gabius, H.-J.1
  • 33
    • 0036534434 scopus 로고    scopus 로고
    • A coactivator code for transcription
    • 4
    • Gamble MJ, Freedman LP (2002) A coactivator code for transcription. Trends Biochem Sci 27(4):165-167
    • (2002) Trends Biochem Sci , vol.27 , pp. 165-167
    • Gamble, M.J.1    Freedman, L.P.2
  • 34
    • 46149083598 scopus 로고    scopus 로고
    • Protein linguistics and the modular code of the cytoskeleton
    • Springer Dordrecht
    • Gimona M (2008) Protein linguistics and the modular code of the cytoskeleton. In: Barbieri M The codes of life: the rules of macroevolution. Springer, Dordrecht, pp 189-206
    • (2008) The Codes of Life: The Rules of Macroevolution , pp. 189-206
    • Gimona, M.1    Barbieri, M.2
  • 36
    • 0010726339 scopus 로고    scopus 로고
    • Genetic information: A metaphor in search of a theory
    • Griffith PE (2001) Genetic information: a metaphor in search of a theory. Philos Sci 68:394-412
    • (2001) Philos Sci , vol.68 , pp. 394-412
    • Griffith, P.E.1
  • 37
    • 3042755146 scopus 로고    scopus 로고
    • What is the developmental challenge?
    • Griffith PE, Knight RD (1998) What is the developmental challenge? Philos Sci 65:276-288
    • (1998) Philos Sci , vol.65 , pp. 276-288
    • Griffith, P.E.1    Knight, R.D.2
  • 41
    • 0034303585 scopus 로고    scopus 로고
    • Neuronal specification in the spinal cord: Inductive signals and transcriptional codes
    • Jessell TM (2000) Neuronal specification in the spinal cord: inductive signals and transcriptional codes. Nat Genet 1:20-29
    • (2000) Nat Genet , vol.1 , pp. 20-29
    • Jessell, T.M.1
  • 43
    • 1642543836 scopus 로고    scopus 로고
    • A 'molecular switchboard'-covalent modifications to proteins and their impact on transcription
    • Khidekel N, Hsieh-Wilson LC (2004) A 'molecular switchboard'-covalent modifications to proteins and their impact on transcription. Org Biomol Chem 2:1-7
    • (2004) Org Biomol Chem , vol.2 , pp. 1-7
    • Khidekel, N.1    Hsieh-Wilson, L.C.2
  • 45
    • 33646817028 scopus 로고    scopus 로고
    • Distinct p53 acetylation cassettes differentially influence gene-expression patterns and cell fate
    • Knights CD, Catania J, Di Giovanni S, Muratoglu S et al (2006) Distinct p53 acetylation cassettes differentially influence gene-expression patterns and cell fate. J Cell Biol 173:553-544
    • (2006) J Cell Biol , vol.173 , pp. 553-544
    • Knights, C.D.1    Catania, J.2    Di Giovanni, S.3    Muratoglu, S.4
  • 46
    • 84943136608 scopus 로고
    • Phytosemiotics
    • 3/4
    • Krampen M (1981) Phytosemiotics. Semiotica 36(3/4):187-209
    • (1981) Semiotica , vol.36 , pp. 187-209
    • Krampen, M.1
  • 47
    • 24444439890 scopus 로고    scopus 로고
    • Biosemiotics in the twentieth century: A view from biology
    • Kull K (1999) Biosemiotics in the twentieth century: a view from biology. Semiotica 127(1/4):385-414
    • (1999) Semiotica , vol.127 , Issue.1-4 , pp. 385-414
    • Kull, K.1
  • 55
    • 46149108902 scopus 로고    scopus 로고
    • The immune self code: From correspondence to complexity
    • Springer Dordrecht
    • Neuman Y (2008) The immune self code: from correspondence to complexity. In: Barbieri M The codes of life: the rules of macroevolution. Springer, Dordrecht, pp 247-263
    • (2008) The Codes of Life: The Rules of Macroevolution , pp. 247-263
    • Neuman, Y.1    Barbieri, M.2
  • 56
    • 73049150125 scopus 로고
    • The dependence of cell-free protein synthesis in E. coli upon naturally occurring or synthetic polyribonucleotides
    • Nirenberg M, Matthaei JH (1961) The dependence of cell-free protein synthesis in E. coli upon naturally occurring or synthetic polyribonucleotides. Proc Natl Acad Sci U S A 47:1588-1602
    • (1961) Proc Natl Acad Sci U S a , vol.47 , pp. 1588-1602
    • Nirenberg, M.1    Matthaei, J.H.2
  • 58
    • 85083631378 scopus 로고
    • The physical basis of coding and reliability in biological evolution
    • Edinburgh University Press Edinburgh, UK
    • Pattee HH (1969) The physical basis of coding and reliability in biological evolution. In: Waddington CH (ed) Toward a theoretical biology, vol. 1. Edinburgh University Press, Edinburgh, UK, pp 67-93
    • (1969) Toward a Theoretical Biology, Vol. 1 , pp. 67-93
    • Pattee, H.H.1    Waddington, C.H.2
  • 59
    • 0002554045 scopus 로고
    • Laws and constraints, symbols and languages
    • Edinburgh University Press Edinburgh, UK
    • Pattee HH (1972) Laws and constraints, symbols and languages. In: Waddington CH (ed) Towards a theoretical biology, vol. 4. Edinburgh University Press, Edinburgh, UK, pp 248-258
    • (1972) Towards a Theoretical Biology, Vol. 4 , pp. 248-258
    • Pattee, H.H.1    Waddington, C.H.2
  • 60
    • 0035040803 scopus 로고    scopus 로고
    • The physics of symbols: Bridging the epistemic cut
    • Pattee HH (2001) The physics of symbols: bridging the epistemic cut. BioSystems 60:5-21
    • (2001) BioSystems , vol.60 , pp. 5-21
    • Pattee, H.H.1
  • 62
    • 21744435965 scopus 로고    scopus 로고
    • Controlling nuclear receptors: The circular logic of cofactor cycles
    • Perissi V, Rosenfeld MG (2005) Controlling nuclear receptors: the circular logic of cofactor cycles. Nature Molecular Cell Biology 6:542-554
    • (2005) Nature Molecular Cell Biology , vol.6 , pp. 542-554
    • Perissi, V.1    Rosenfeld, M.G.2
  • 64
    • 46149091393 scopus 로고
    • Material bases of signification
    • 3/4
    • Prodi G (1988) Material bases of signification. Semiotica 69(3/4):191-241
    • (1988) Semiotica , vol.69 , pp. 191-241
    • Prodi, G.1
  • 65
    • 0030589498 scopus 로고    scopus 로고
    • Cadherine in the developing central nervous system: An adhesive code for segmental and functional subdivisions
    • Readies C, Takeichi M (1996) Cadherine in the developing central nervous system: an adhesive code for segmental and functional subdivisions. Dev Biol 180:413-423
    • (1996) Dev Biol , vol.180 , pp. 413-423
    • Readies, C.1    Takeichi, M.2
  • 67
    • 0038698971 scopus 로고
    • Laws of symbolic mediation in the dynamics of self and personality
    • Rothschild FS (1962) Laws of symbolic mediation in the dynamics of self and personality. Ann NY Acad Sci 96:774-784
    • (1962) Ann NY Acad Sci , vol.96 , pp. 774-784
    • Rothschild, F.S.1
  • 68
    • 0000777476 scopus 로고    scopus 로고
    • Biological information. a skeptical look at some central dogmas of molecular biology
    • Kluwer Academic Dordrecht
    • Sarkar S (1996) Biological information. a skeptical look at some central dogmas of molecular biology. In: Sarkar S The philosophy and history of biology. Kluwer Academic, Dordrecht, pp 187-231
    • (1996) The Philosophy and History of Biology , pp. 187-231
    • Sarkar, S.1    Sarkar, S.2
  • 69
    • 0003044561 scopus 로고    scopus 로고
    • Information in genetics and developmental biology
    • Sarkar S (2000) Information in genetics and developmental biology. Philos Sci 67:208-213
    • (2000) Philos Sci , vol.67 , pp. 208-213
    • Sarkar, S.1
  • 70
    • 0004146634 scopus 로고
    • Cambridge University Press Cambridge, UK
    • Schrödinger E (1944) What is life? Cambridge University Press, Cambridge, UK
    • (1944) What Is Life?
    • Schrödinger, E.1
  • 71
    • 0037155604 scopus 로고    scopus 로고
    • Pituitary development: Regulatory codes in mammalian organogenesis
    • Scully KM, Rosenfeld MG (2002) Pituitary development: regulatory codes in mammalian organogenesis. Science 295:2231-2235
    • (2002) Science , vol.295 , pp. 2231-2235
    • Scully, K.M.1    Rosenfeld, M.G.2
  • 72
    • 0037720688 scopus 로고
    • Communication among social bees; Porpoises and sonar; Man and dolphin
    • Sebeok TA (1963) Communication among social bees; porpoises and sonar; man and dolphin. Language 39:448-466
    • (1963) Language , vol.39 , pp. 448-466
    • Sebeok, T.A.1
  • 74
    • 32644450363 scopus 로고    scopus 로고
    • Biosemiotics: Its roots, proliferation, and prospects
    • Kull K (ed) Jakob von Uexküll: A paradigm for biology and semiotics.
    • Sebeok TA (2001) Biosemiotics: its roots, proliferation, and prospects. In: Kull K (ed) Jakob von Uexküll: A paradigm for biology and semiotics. Semiotica 134(1/4), pp 61-78
    • (2001) Semiotica , vol.134 , Issue.1-4 , pp. 61-78
    • Sebeok, T.A.1
  • 75
    • 84856043672 scopus 로고
    • A mathematical theory of communication
    • 623-656
    • Shannon CE (1948) A mathematical theory of communication. Bell Syst Tech J 27::379-424:623-656
    • (1948) Bell Syst Tech J , vol.27 , pp. 379-424
    • Shannon, C.E.1
  • 76
    • 0033166657 scopus 로고    scopus 로고
    • The diversity of cadherins and implications for a synaptic adhesive code in the CNS
    • Shapiro L, Colman DR (1999) The diversity of cadherins and implications for a synaptic adhesive code in the CNS. Neuron 23:427-430
    • (1999) Neuron , vol.23 , pp. 427-430
    • Shapiro, L.1    Colman, D.R.2
  • 77
    • 19944415093 scopus 로고
    • The global organism: A new view of bacteria
    • 4
    • Sonea S (1988) The global organism: a new view of bacteria. The Sciences 28(4):38-45
    • (1988) The Sciences , vol.28 , pp. 38-45
    • Sonea, S.1
  • 81
    • 0034610814 scopus 로고    scopus 로고
    • The language of covalent histone modifications
    • Strahl BD, Allis D (2000) The language of covalent histone modifications. Nature 403:41-45
    • (2000) Nature , vol.403 , pp. 41-45
    • Strahl, B.D.1    Allis, D.2
  • 82
    • 0015493877 scopus 로고
    • Studies on the mechanism of hormone action
    • Sutherland EW (1972) Studies on the mechanism of hormone action. Science 177:401-408
    • (1972) Science , vol.177 , pp. 401-408
    • Sutherland, E.W.1
  • 83
    • 46149095858 scopus 로고    scopus 로고
    • Semiosis: The transformation of energy into information
    • Taborsky E (1999) Semiosis: the transformation of energy into information. Semiotica 127:599-646
    • (1999) Semiotica , vol.127 , pp. 599-646
    • Taborsky, E.1
  • 84
    • 33846029970 scopus 로고    scopus 로고
    • Energy and evolutionary semiosis
    • 1
    • Taborsky E (2002) Energy and evolutionary semiosis. Sign Systems Studies 30(1):361-381
    • (2002) Sign Systems Studies , vol.30 , pp. 361-381
    • Taborsky, E.1
  • 85
    • 15944378903 scopus 로고    scopus 로고
    • Post-translational modifications influence transcription factor activity: A view from the ETS superfamily
    • Tootle TL, Rebay I (2005) Post-translational modifications influence transcription factor activity: a view from the ETS superfamily. BioEssays 27:285-298
    • (2005) BioEssays , vol.27 , pp. 285-298
    • Tootle, T.L.1    Rebay, I.2
  • 86
    • 0023194889 scopus 로고
    • Translation framing code and frame-monitoring mechanism as suggested by the analysis of mRNA and 16s rRNA nucleotide sequence
    • Trifonov EN (1987) Translation framing code and frame-monitoring mechanism as suggested by the analysis of mRNA and 16s rRNA nucleotide sequence. J Mol Biol 194:643-652
    • (1987) J Mol Biol , vol.194 , pp. 643-652
    • Trifonov, E.N.1
  • 87
    • 0024334889 scopus 로고
    • The multiple codes of nucleotide sequences
    • Trifonov EN (1989) The multiple codes of nucleotide sequences. Bull Math Biol 51:417-432
    • (1989) Bull Math Biol , vol.51 , pp. 417-432
    • Trifonov, E.N.1
  • 88
    • 0030474941 scopus 로고    scopus 로고
    • Interfering contexts of regulatory sequence elements
    • Trifonov EN (1996) Interfering contexts of regulatory sequence elements. Cabios 12:423-429
    • (1996) Cabios , vol.12 , pp. 423-429
    • Trifonov, E.N.1
  • 89
    • 0032775704 scopus 로고    scopus 로고
    • Elucidating sequence codes: Three codes for evolution
    • Trifonov EN (1999) Elucidating sequence codes: three codes for evolution. Ann NY Acad Sci 870:330-338
    • (1999) Ann NY Acad Sci , vol.870 , pp. 330-338
    • Trifonov, E.N.1
  • 90
    • 0033848849 scopus 로고    scopus 로고
    • Histone acetylation and an epigenetic code
    • Turner BM (2000) Histone acetylation and an epigenetic code. BioEssay 22:836-845
    • (2000) BioEssay , vol.22 , pp. 836-845
    • Turner, B.M.1
  • 91
    • 0036850325 scopus 로고    scopus 로고
    • Cellular memory and the histone code
    • Turner BM (2002) Cellular memory and the histone code. Cell 111:285-291
    • (2002) Cell , vol.111 , pp. 285-291
    • Turner, B.M.1
  • 93
    • 33749048664 scopus 로고
    • Genetical implications of the structure of deoxyribose nucleic acid
    • Watson JD, Crick FHC (1953) Genetical implications of the structure of deoxyribose nucleic acid. Nature 71:964-96
    • (1953) Nature , vol.71 , pp. 964-96
    • Watson, J.D.1    Crick, F.H.C.2
  • 94
    • 0034682457 scopus 로고    scopus 로고
    • Interpreting the universal phylogenetic tree
    • Woese CR (2000) Interpreting the universal phylogenetic tree. Proc Natl Acad Sci U S A 97:8392-8396
    • (2000) Proc Natl Acad Sci U S a , vol.97 , pp. 8392-8396
    • Woese, C.R.1


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